BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042949
(608 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 155/318 (48%), Gaps = 48/318 (15%)
Query: 276 EVRPEVRRSELVFFVNEKERFKLDDLLEATADLRSQTICS-----SLFMVRLKNSAVYAV 330
E PEV +L +RF L +L A+ + ++ I ++ RL + + AV
Sbjct: 15 EEDPEVHLGQL-------KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAV 67
Query: 331 KRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
KRLK + Q +F + I H N+L L + T E+LLVY Y +NGS+ S L
Sbjct: 68 KRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 127
Query: 389 AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
E + W R IA G A+GL +++ + + I H ++K +NILL+E + ++ +
Sbjct: 128 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGD 185
Query: 449 CGYSKFLDPK----KTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG------ 494
G +K +D K + + G+ APE SE+ DVF +GV+LLEL+TG
Sbjct: 186 FGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 245
Query: 495 -KTVEKTGIDLPKWVKAMVRE---------EWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
+ + L WVK +++E + G D+EV + L+ VAL C
Sbjct: 246 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQ--------LIQVALLCT 297
Query: 545 SNSPDDRPTMAEVLERIE 562
+SP +RP M+EV+ +E
Sbjct: 298 QSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 154/315 (48%), Gaps = 48/315 (15%)
Query: 279 PEVRRSELVFFVNEKERFKLDDLLEATADLRSQTICS-----SLFMVRLKNSAVYAVKRL 333
PEV +L +RF L +L A+ + ++ I ++ RL + + AVKRL
Sbjct: 10 PEVHLGQL-------KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL 62
Query: 334 KKLQVSMDE--FSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYI 391
K+ + E F + I H N+L L + T E+LLVY Y +NGS+ S L
Sbjct: 63 KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 122
Query: 392 EGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGY 451
E + W R IA G A+GL +++ + + I H ++K +NILL+E + ++ + G
Sbjct: 123 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 452 SKFLDPKKTCLFSSN----GYTAPE----KTVSEQGDVFSFGVILLELLTG-------KT 496
+K +D K + + G+ APE SE+ DVF +GV+LLEL+TG +
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 497 VEKTGIDLPKWVKAMVRE---------EWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNS 547
+ L WVK +++E + G D+EV + L+ VAL C +S
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQ--------LIQVALLCTQSS 292
Query: 548 PDDRPTMAEVLERIE 562
P +RP M+EV+ +E
Sbjct: 293 PMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 34/296 (11%)
Query: 292 EKERFKLDDLLEATAD-----LRSQTICSSLFMVRLKNSAVYAVKR-LKKLQVSMDEFSQ 345
E R L DL EAT + L + ++ L++ A A+KR + ++EF
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 346 TMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSI 405
+ + +HP+++ L+ + E +L+YKY NG+L L W+ RL I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 406 ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSS 465
G A+GL +++ ++ I H ++K NILL+EN P I++ G SK K T L +
Sbjct: 145 CIGAARGLHYLHTRA-----IIHRDVKSINILLDENFVPKITDFGISK----KGTELGQT 195
Query: 466 N---------GYTAPEKTV----SEQGDVFSFGVILLELLTGK-----TVEKTGIDLPKW 507
+ GY PE + +E+ DV+SFGV+L E+L + ++ + ++L +W
Sbjct: 196 HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 508 VKAMVREEWTGEVFDKEVAKAGRQWAF-PLLNVALKCVSNSPDDRPTMAEVLERIE 562
++ D +A R + + A+KC++ S +DRP+M +VL ++E
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 292 EKERFKLDDLLEATAD-----LRSQTICSSLFMVRLKNSAVYAVKR-LKKLQVSMDEFSQ 345
E R L DL EAT + L + ++ L++ A A+KR + ++EF
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 346 TMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSI 405
+ + +HP+++ L+ + E +L+YKY NG+L L W+ RL I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 406 ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKF---LDPKK--T 460
G A+GL +++ ++ I H ++K NILL+EN P I++ G SK LD
Sbjct: 145 CIGAARGLHYLHTRA-----IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 461 CLFSSNGYTAPEKTV----SEQGDVFSFGVILLELLTGK-----TVEKTGIDLPKWVKAM 511
+ + GY PE + +E+ DV+SFGV+L E+L + ++ + ++L +W
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 512 VREEWTGEVFDKEVAKAGRQWAF-PLLNVALKCVSNSPDDRPTMAEVLERIE 562
++ D +A R + + A+KC++ S +DRP+M +VL ++E
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 132/258 (51%), Gaps = 23/258 (8%)
Query: 324 NSAVYAVKRLKKL-QVSMDE----FSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQ 378
N+ AVK+L + ++ +E F Q ++ + +H N++ L+ ++S ++ LVY Y
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 379 SNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL 438
NGSLL L ++G W +R IA G A G++F+++ + H ++K +NILL
Sbjct: 113 PNGSLLDRLSC-LDGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILL 166
Query: 439 NENEDPLISECGYSKFLDP-KKTCLFS----SNGYTAPEK---TVSEQGDVFSFGVILLE 490
+E IS+ G ++ + +T + S + Y APE ++ + D++SFGV+LLE
Sbjct: 167 DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLE 226
Query: 491 LLTGKTV----EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSN 546
++TG + + L + E+ + DK++ A + +VA +C+
Sbjct: 227 IITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHE 286
Query: 547 SPDDRPTMAEVLERIEEV 564
+ RP + +V + ++E+
Sbjct: 287 KKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 129/258 (50%), Gaps = 23/258 (8%)
Query: 324 NSAVYAVKRLKKL-QVSMDE----FSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQ 378
N+ AVK+L + ++ +E F Q ++ + +H N++ L+ ++S ++ LVY Y
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 379 SNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL 438
NGSLL L ++G W +R IA G A G++F+++ + H ++K +NILL
Sbjct: 113 PNGSLLDRLSC-LDGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILL 166
Query: 439 NENEDPLISECGYSKFLDPKKTCLF-----SSNGYTAPEK---TVSEQGDVFSFGVILLE 490
+E IS+ G ++ + + + Y APE ++ + D++SFGV+LLE
Sbjct: 167 DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLE 226
Query: 491 LLTGKTV----EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSN 546
++TG + + L + E+ + DK++ A + +VA +C+
Sbjct: 227 IITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHE 286
Query: 547 SPDDRPTMAEVLERIEEV 564
+ RP + +V + ++E+
Sbjct: 287 KKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 129/258 (50%), Gaps = 23/258 (8%)
Query: 324 NSAVYAVKRLKKL-QVSMDE----FSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQ 378
N+ AVK+L + ++ +E F Q ++ + +H N++ L+ ++S ++ LVY Y
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 379 SNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL 438
NGSLL L ++G W +R IA G A G++F+++ + H ++K +NILL
Sbjct: 107 PNGSLLDRLSC-LDGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILL 160
Query: 439 NENEDPLISECGYS----KFLDPKKTC-LFSSNGYTAPEK---TVSEQGDVFSFGVILLE 490
+E IS+ G + KF + + Y APE ++ + D++SFGV+LLE
Sbjct: 161 DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLE 220
Query: 491 LLTGKTV----EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSN 546
++TG + + L + E+ + DK++ A + +VA +C+
Sbjct: 221 IITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHE 280
Query: 547 SPDDRPTMAEVLERIEEV 564
+ RP + +V + ++E+
Sbjct: 281 KKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 23/257 (8%)
Query: 324 NSAVYAVKRLKKL-QVSMDE----FSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQ 378
N+ AVK+L + ++ +E F Q ++ +H N++ L+ ++S ++ LVY Y
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 379 SNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL 438
NGSLL L ++G W R IA G A G++F+++ + H ++K +NILL
Sbjct: 104 PNGSLLDRLSC-LDGTPPLSWHXRCKIAQGAANGINFLHENHH-----IHRDIKSANILL 157
Query: 439 NENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAPEK---TVSEQGDVFSFGVILLE 490
+E IS+ G ++ + + + + Y APE ++ + D++SFGV+LLE
Sbjct: 158 DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLE 217
Query: 491 LLTGKTV----EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSN 546
++TG + + L + E+ + DK+ A +VA +C+
Sbjct: 218 IITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHE 277
Query: 547 SPDDRPTMAEVLERIEE 563
+ RP + +V + ++E
Sbjct: 278 KKNKRPDIKKVQQLLQE 294
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 48/285 (16%)
Query: 317 LFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYK 376
++M AVK +K +S++ F + L+H ++ L T E ++ +
Sbjct: 204 VWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITE 262
Query: 377 YQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNI 436
+ + GSLL L++ K+ P KL + + IA+G+ F+ E++ H +L+ +NI
Sbjct: 263 FMAKGSLLDFLKSDEGSKQPLP-KL-IDFSAQIAEGMAFI-----EQRNYIHRDLRAANI 315
Query: 437 LLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVIL 488
L++ + I++ G ++ ++ + + TAPE + + + DV+SFG++L
Sbjct: 316 LVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375
Query: 489 LELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALK 542
+E++T + G+ P+ ++A+ R G + P L N+ ++
Sbjct: 376 MEIVTYGRIPYPGMSNPEVIRALER---------------GYRMPRPENCPEELYNIMMR 420
Query: 543 CVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSMESIP 587
C N P++RPT E I+ V++ D ++ S E IP
Sbjct: 421 CWKNRPEERPT----FEYIQSVLD-------DFYTATESQXEEIP 454
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 243 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 302
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H NL N L+ EN
Sbjct: 303 LLDYLREC--NRQEVSAVVLLYMATQISSAMEYL-----EKKNFIHRNLAARNCLVGENH 355
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 356 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 415
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 416 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 466
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 467 AEIHQAFE 474
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 282 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 341
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H NL N L+ EN
Sbjct: 342 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRNLAARNCLVGENH 394
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPE----KTVSEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 395 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 454
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 455 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 505
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 506 AEIHQAFE 513
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 240 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 299
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H NL N L+ EN
Sbjct: 300 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRNLAARNCLVGENH 352
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 353 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 412
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 413 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 463
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 464 AEIHQAFE 471
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 36/258 (13%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + +V +Y G+
Sbjct: 55 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGN 114
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L + + + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 115 LLDYLREC--NREEVTAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 167
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE T S + DV++FGV+L E+ T
Sbjct: 168 VVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATY 227
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
GIDL +V+D + + G + P + + C SP
Sbjct: 228 GMSPYPGIDL-------------SQVYD--LLEKGYRMEQPEGCPPKVYELMRACWKWSP 272
Query: 549 DDRPTMAEVLERIEEVVN 566
DRP+ AE + E + +
Sbjct: 273 ADRPSFAETHQAFETMFH 290
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 317 LFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYK 376
++M AVK +K +S++ F + L+H ++ L T E ++ +
Sbjct: 31 VWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITE 89
Query: 377 YQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNI 436
+ + GSLL L++ K+ P KL + + IA+G+ F+ E++ H +L+ +NI
Sbjct: 90 FMAKGSLLDFLKSDEGSKQPLP-KL-IDFSAQIAEGMAFI-----EQRNYIHRDLRAANI 142
Query: 437 LLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVIL 488
L++ + I++ G ++ ++ + + TAPE + + + DV+SFG++L
Sbjct: 143 LVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 202
Query: 489 LELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALK 542
+E++T + G+ P+ ++A+ R G + P L N+ ++
Sbjct: 203 MEIVTYGRIPYPGMSNPEVIRALER---------------GYRMPRPENCPEELYNIMMR 247
Query: 543 CVSNSPDDRPTMAEVLERIEEVVN 566
C N P++RPT E I+ V++
Sbjct: 248 CWKNRPEERPT----FEYIQSVLD 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 36 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 95
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 96 LLDYLREC--NRQEVSAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 148
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 209 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 259
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 260 AEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 36 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 95
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 96 LLDYLREC--NRQEVSAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 148
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 209 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 259
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 260 AEIHQAFE 267
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 31/251 (12%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIG---NLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++ +R++ L+HPNI+ + + +V +Y S GSL
Sbjct: 64 AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR 123
Query: 386 LLEAYIEGKRD-FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
LL + G R+ + RLS+A +AKG+++++ N I H NLK N+L+++
Sbjct: 124 LL--HKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTV 178
Query: 445 LISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGDVFSFGVILLELLTG 494
+ + G S+ K + SS + APE + +E+ DV+SFGVIL EL T
Sbjct: 179 KVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL 235
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
+ + G P V A V F + + R + + C +N P RP+
Sbjct: 236 Q--QPWGNLNPAQVVAAVG-------FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSF 286
Query: 555 AEVLERIEEVV 565
A +++ + ++
Sbjct: 287 ATIMDLLRPLI 297
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 36 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 96 LLDYLREC--NRQEVSAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 148
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 209 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 259
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 260 AEIHQAFE 267
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 33/253 (13%)
Query: 329 AVKR--LKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
A+KR L+K Q SMDE + ++ + HPNI+ +E LV K S GS+L +
Sbjct: 39 AIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 98
Query: 387 LEAYI-EGKRDFPWKLRLSIAT---GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
++ + +G+ +IAT + +GL+++++ H ++K NILL E+
Sbjct: 99 IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ-----IHRDVKAGNILLGEDG 153
Query: 443 DPLISECGYSKFL--------DPKKTCLFSSNGYTAPEKTVSEQ-------GDVFSFGVI 487
I++ G S FL + + + + APE V EQ D++SFG+
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE--VMEQVRGYDFKADIWSFGIT 211
Query: 488 LLELLTGKTVEKTGIDLPKWVKAMVREEWTGE--VFDKEVAKAGRQWAFPLLNVALKCVS 545
+EL TG + + + + + E V DKE+ K ++ + C+
Sbjct: 212 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK---KYGKSFRKMISLCLQ 268
Query: 546 NSPDDRPTMAEVL 558
P+ RPT AE+L
Sbjct: 269 KDPEKRPTAAELL 281
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 41 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 100
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 101 LLDYLREC--NRQEVSAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 153
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 154 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 214 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 264
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 265 AEIHQAFE 272
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 36 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 96 LLDYLREC--NRQEVSAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 148
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 209 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 259
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 260 AEIHQAFE 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 33/253 (13%)
Query: 329 AVKR--LKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
A+KR L+K Q SMDE + ++ + HPNI+ +E LV K S GS+L +
Sbjct: 44 AIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 103
Query: 387 LEAYI-EGKRDFPWKLRLSIAT---GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
++ + +G+ +IAT + +GL+++++ H ++K NILL E+
Sbjct: 104 IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ-----IHRDVKAGNILLGEDG 158
Query: 443 DPLISECGYSKFL--------DPKKTCLFSSNGYTAPEKTVSEQ-------GDVFSFGVI 487
I++ G S FL + + + + APE V EQ D++SFG+
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE--VMEQVRGYDFKADIWSFGIT 216
Query: 488 LLELLTGKTVEKTGIDLPKWVKAMVREEWTGE--VFDKEVAKAGRQWAFPLLNVALKCVS 545
+EL TG + + + + + E V DKE+ K ++ + C+
Sbjct: 217 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK---KYGKSFRKMISLCLQ 273
Query: 546 NSPDDRPTMAEVL 558
P+ RPT AE+L
Sbjct: 274 KDPEKRPTAAELL 286
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 37 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 96
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 97 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 149
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 150 LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 209
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 210 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 260
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 261 AEIHQAFE 268
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 41 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 100
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 101 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 153
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 154 LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 214 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 264
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 265 AEIHQAFE 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 41 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 100
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 101 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 153
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 154 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 214 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 264
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 265 AEIHQAFE 272
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 34 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 93
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 94 LLDYLREC--NRQEVSAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 146
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 147 LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 206
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GID P V ++ ++ + E + + + L+ C +P DRP+
Sbjct: 207 GMSPYPGID-PSQVYELLEKD-----YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 257
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 258 AEIHQAFE 265
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 41 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 100
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 101 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 153
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 154 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 214 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 264
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 265 AEIHQAFE 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 36 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 96 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 148
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 209 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 259
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 260 AEIHQAFE 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 36 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 96 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 148
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 209 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 259
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 260 AEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 40 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 99
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 100 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 152
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 153 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 212
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 213 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 263
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 264 AEIHQAFE 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 38 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 97
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 98 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 150
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 151 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 211 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 261
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 262 AEIHQAFE 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 41 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 100
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 101 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 153
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 154 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 214 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 264
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 265 AEIHQAFE 272
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 49 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 108
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 109 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 161
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 162 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 221
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 222 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 272
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 273 AEIHQAFE 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 38 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 97
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 98 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 150
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 151 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 211 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 261
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 262 AEIHQAFE 269
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 34 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 93
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 94 LLDYLREC--NRQEVSAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 146
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 147 LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 206
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GID P V ++ ++ + E + + + L+ C +P DRP+
Sbjct: 207 GMSPYPGID-PSQVYELLEKD-----YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 257
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 258 AEIHQAFE 265
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 123/260 (47%), Gaps = 43/260 (16%)
Query: 317 LFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYK 376
++M AVK +K +S++ F + L+H ++ L T E ++ +
Sbjct: 198 VWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITE 256
Query: 377 YQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNI 436
+ + GSLL L++ K+ P KL + + IA+G+ F+ E++ H +L+ +NI
Sbjct: 257 FMAKGSLLDFLKSDEGSKQPLP-KL-IDFSAQIAEGMAFI-----EQRNYIHRDLRAANI 309
Query: 437 LLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPEK----TVSEQGDVFSFGVILLELL 492
L++ + L+ C + F + F +TAPE + + + DV+SFG++L+E++
Sbjct: 310 LVSAS---LV--CKIADFGLARVGAKFPIK-WTAPEAINFGSFTIKSDVWSFGILLMEIV 363
Query: 493 TGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSN 546
T + G+ P+ ++A+ R G + P L N+ ++C N
Sbjct: 364 TYGRIPYPGMSNPEVIRALER---------------GYRMPRPENCPEELYNIMMRCWKN 408
Query: 547 SPDDRPTMAEVLERIEEVVN 566
P++RPT E I+ V++
Sbjct: 409 RPEERPT----FEYIQSVLD 424
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 30/251 (11%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 34 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 93
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 94 LLDYLREC--NRQEVSAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 146
Query: 443 DPLISECGYSKFLDPKKTCLFSSNG-------YTAPEKTV----SEQGDVFSFGVILLEL 491
+++ G S+ + F+++ +TAPE S + DV++FGV+L E+
Sbjct: 147 LVKVADFGLSRLMTGDT---FTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 492 LTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDR 551
T GID P V ++ ++ + E + + + L+ C +P DR
Sbjct: 204 ATYGMSPYPGID-PSQVYELLEKD-----YRMERPEGCPEKVYELMRA---CWQWNPSDR 254
Query: 552 PTMAEVLERIE 562
P+ AE+ + E
Sbjct: 255 PSFAEIHQAFE 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 38 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 97
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 98 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 150
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 151 LVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 210
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 211 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 261
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 262 AEIHQAFE 269
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 37 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 95
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H NL+ +NIL+++
Sbjct: 96 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRNLRAANILVSDTL 142
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 143 SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 202
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 203 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 247
Query: 549 DDRPTM 554
+DRPT
Sbjct: 248 EDRPTF 253
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 24/248 (9%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGS 382
K S AVK LK+ + ++EF + + +KHPN++ L+ + ++ ++ + G+
Sbjct: 37 KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 96
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
LL L +++ + L +AT I+ ++++ E+K H +L N L+ EN
Sbjct: 97 LLDYLREC--NRQEVNAVVLLYMATQISSAMEYL-----EKKNFIHRDLAARNCLVGENH 149
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTG 494
+++ G S+ + + + TAPE S + DV++FGV+L E+ T
Sbjct: 150 LVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 209
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTM 554
GIDL + + + ++ + E + + + L+ C +P DRP+
Sbjct: 210 GMSPYPGIDLSQVYELLEKD------YRMERPEGCPEKVYELMRA---CWQWNPSDRPSF 260
Query: 555 AEVLERIE 562
AE+ + E
Sbjct: 261 AEIHQAFE 268
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 29/250 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIG---NLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++ +R++ L+HPNI+ + + +V +Y S GSL
Sbjct: 64 AVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR 123
Query: 386 LLEAYIEGKRD-FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
LL + G R+ + RLS+A +AKG+++++ N I H +LK N+L+++
Sbjct: 124 LL--HKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRDLKSPNLLVDKKYTV 178
Query: 445 LISECGYSK-----FLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTGK 495
+ + G S+ FL K + + APE + +E+ DV+SFGVIL EL T +
Sbjct: 179 KVCDFGLSRLKASXFLXSKXAA--GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236
Query: 496 TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMA 555
+ G P V A V F + + R + + C +N P RP+ A
Sbjct: 237 --QPWGNLNPAQVVAAVG-------FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFA 287
Query: 556 EVLERIEEVV 565
+++ + ++
Sbjct: 288 TIMDLLRPLI 297
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 49/261 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 41 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 99
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 100 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 146
Query: 443 DPLISECGYSKFL-DPKKTCLFSSN---GYTAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ + D + T + +TAPE T + + DV+SFG++L E++T
Sbjct: 147 SCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 206
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 207 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 549 DDRPTMAEVLERIEEVVNGND 569
+DRPT + +E+ +
Sbjct: 252 EDRPTFDYLRSVLEDFFTATE 272
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 36 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 94
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 95 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 141
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 142 SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 201
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 202 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 246
Query: 549 DDRPTM 554
+DRPT
Sbjct: 247 EDRPTF 252
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 42 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 100
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 101 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 147
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 148 SCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 207
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 208 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 252
Query: 549 DDRPTM 554
+DRPT
Sbjct: 253 EDRPTF 258
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 41 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 99
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 100 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 146
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 147 SCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 206
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 207 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 549 DDRPTM 554
+DRPT
Sbjct: 252 EDRPTF 257
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 43 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 101
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 102 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 148
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 149 SCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 208
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 209 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 253
Query: 549 DDRPTM 554
+DRPT
Sbjct: 254 EDRPTF 259
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 49/261 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 41 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 99
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 100 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 146
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 147 SCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 206
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 207 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 549 DDRPTMAEVLERIEEVVNGND 569
+DRPT + +E+ +
Sbjct: 252 EDRPTFDYLRSVLEDFFTATE 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 49/261 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 46 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 104
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 105 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 151
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 152 SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 211
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 212 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 256
Query: 549 DDRPTMAEVLERIEEVVNGND 569
+DRPT + +E+ +
Sbjct: 257 EDRPTFDYLRSVLEDFFTATE 277
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 49/261 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 50 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 108
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 109 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 155
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 156 SCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 215
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 216 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 260
Query: 549 DDRPTMAEVLERIEEVVNGND 569
+DRPT + +E+ +
Sbjct: 261 EDRPTFDYLRSVLEDFFTATE 281
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 41 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 99
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 100 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 146
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 147 SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 206
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 207 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 251
Query: 549 DDRPTM 554
+DRPT
Sbjct: 252 EDRPTF 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 33/242 (13%)
Query: 343 FSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA-----YIEGKRDF 397
F +RQ+ + HPNI+ L Y + LV +Y GSL ++L Y
Sbjct: 48 FIVELRQLSRVNHPNIVKL--YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105
Query: 398 PWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL-ISECGYSKFLD 456
W L+ S G+A Y S + K + H +LK N+LL L I + G + +
Sbjct: 106 SWCLQCS--QGVA------YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157
Query: 457 PKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLT-GKTVEKTGIDLPKWVKAM 511
T S + APE SE+ DVFS+G+IL E++T K ++ G
Sbjct: 158 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG-------GPA 210
Query: 512 VREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVN---GN 568
R W V + + P+ ++ +C S P RP+M E+++ + ++ G
Sbjct: 211 FRIMWA--VHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268
Query: 569 DE 570
DE
Sbjct: 269 DE 270
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 49/261 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 49 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 107
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 108 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 154
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 155 SCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 214
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 215 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 259
Query: 549 DDRPTMAEVLERIEEVVNGND 569
+DRPT + +E+ +
Sbjct: 260 EDRPTFDYLRSVLEDFFTATE 280
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 49/261 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 47 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 105
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 106 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 152
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 153 SCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 212
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 213 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 257
Query: 549 DDRPTMAEVLERIEEVVNGND 569
+DRPT + +E+ +
Sbjct: 258 EDRPTFDYLRSVLEDFFTATE 278
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 47 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 105
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 106 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 152
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 153 SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 212
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 213 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 257
Query: 549 DDRPTM 554
+DRPT
Sbjct: 258 EDRPTF 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 33/242 (13%)
Query: 343 FSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA-----YIEGKRDF 397
F +RQ+ + HPNI+ L Y + LV +Y GSL ++L Y
Sbjct: 49 FIVELRQLSRVNHPNIVKL--YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 106
Query: 398 PWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL-ISECGYSKFLD 456
W L+ S G+A Y S + K + H +LK N+LL L I + G + +
Sbjct: 107 SWCLQCS--QGVA------YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 158
Query: 457 PKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLT-GKTVEKTGIDLPKWVKAM 511
T S + APE SE+ DVFS+G+IL E++T K ++ G
Sbjct: 159 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG-------GPA 211
Query: 512 VREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVN---GN 568
R W V + + P+ ++ +C S P RP+M E+++ + ++ G
Sbjct: 212 FRIMWA--VHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 269
Query: 569 DE 570
DE
Sbjct: 270 DE 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 49/261 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK LK+ +S D F + L+H ++ L T E ++ +Y NGSL+ L+
Sbjct: 51 AVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLK 109
Query: 389 AYIEGKRDFPWKLRLSI------ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
P ++L+I A IA+G+ F+ EE+ H +L+ +NIL+++
Sbjct: 110 T--------PSGIKLTINKLLDMAAQIAEGMAFI-----EERNYIHRDLRAANILVSDTL 156
Query: 443 DPLISECGYSKFLDPKKTCLFSSNGY----TAPEK----TVSEQGDVFSFGVILLELLTG 494
I++ G ++ ++ + + TAPE T + + DV+SFG++L E++T
Sbjct: 157 SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 216
Query: 495 KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSP 548
+ G+ P+ ++ + R G + P L + C P
Sbjct: 217 GRIPYPGMTNPEVIQNLER---------------GYRMVRPDNCPEELYQLMRLCWKERP 261
Query: 549 DDRPTMAEVLERIEEVVNGND 569
+DRPT + +E+ +
Sbjct: 262 EDRPTFDYLRSVLEDFFTATE 282
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 47/288 (16%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLKKLQVSMD--EFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS V K A+K LK +F +G HPNI+ L + +
Sbjct: 30 VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP 89
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
+++ +Y NGSL + L +G+ F + + GI G+ ++ + + H +
Sbjct: 90 VMIITEYMENGSLDAFLRKN-DGR--FTVIQLVGMLRGIGSGMKYL-----SDMSYVHRD 141
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +TAPE + + D
Sbjct: 142 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 201
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKA---GRQWAFP-- 535
V+S+G+++ E+++ + P W ++ +++V KA G + P
Sbjct: 202 VWSYGIVMWEVMSYG-------ERPYW-----------DMSNQDVIKAIEEGYRLPPPMD 243
Query: 536 ----LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSS 579
L + L C DRP +++ +++++ + R S SS
Sbjct: 244 CPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGSESS 291
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 47/288 (16%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLKKLQVSMD--EFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS V K A+K LK +F +G HPNI+ L + +
Sbjct: 24 VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP 83
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
+++ +Y NGSL + L +G+ F + + GI G+ ++ + + H +
Sbjct: 84 VMIITEYMENGSLDAFLRKN-DGR--FTVIQLVGMLRGIGSGMKYL-----SDMSYVHRD 135
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +TAPE + + D
Sbjct: 136 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 195
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKA---GRQWAFP-- 535
V+S+G+++ E+++ + P W ++ +++V KA G + P
Sbjct: 196 VWSYGIVMWEVMSYG-------ERPYW-----------DMSNQDVIKAIEEGYRLPPPMD 237
Query: 536 ----LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSS 579
L + L C DRP +++ +++++ + R S SS
Sbjct: 238 CPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGSESS 285
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 47/288 (16%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLKKLQVSMD--EFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS V K A+K LK +F +G HPNI+ L + +
Sbjct: 45 VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP 104
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
+++ +Y NGSL + L +G+ F + + GI G+ ++ + + H +
Sbjct: 105 VMIITEYMENGSLDAFLRKN-DGR--FTVIQLVGMLRGIGSGMKYL-----SDMSAVHRD 156
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +TAPE + + D
Sbjct: 157 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 216
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKA---GRQWAFP-- 535
V+S+G+++ E+++ + P W ++ +++V KA G + P
Sbjct: 217 VWSYGIVMWEVMSYG-------ERPYW-----------DMSNQDVIKAIEEGYRLPPPMD 258
Query: 536 ----LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSS 579
L + L C DRP +++ +++++ + R S SS
Sbjct: 259 CPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGSESS 306
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 21/186 (11%)
Query: 323 KNSAVYAVKRLKKLQVSMD---EFSQTMRQIGNL--KHPNILPLVCYNSTNEEKLLVYKY 377
K + +A+K LKK V MD E + +++ +L +HP + + C T E V +Y
Sbjct: 40 KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEY 99
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNIL 437
+ G L+ +I+ F A I GL F++ K I + +LKL NIL
Sbjct: 100 LNGGDLM----YHIQSCHKFDLSRATFYAAEIILGLQFLHSKG-----IVYRDLKLDNIL 150
Query: 438 LNENEDPLISECGYSK--FLDPKKTCLF-SSNGYTAPEKTVSEQG----DVFSFGVILLE 490
L+++ I++ G K L KT F + Y APE + ++ D +SFGV+L E
Sbjct: 151 LDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210
Query: 491 LLTGKT 496
+L G++
Sbjct: 211 MLIGQS 216
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKK--LQVSMDEFSQTMRQIGNLKHPNILPLVCYNST 367
S +C V + A+K LK + +F +G HPNI+ L +
Sbjct: 62 SGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121
Query: 368 NEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIP 427
++V +Y NGSL + L + +G+ F + + G+ G+ ++ +
Sbjct: 122 GRLAMIVTEYMENGSLDTFLRTH-DGQ--FTIMQLVGMLRGVGAGMRYL-----SDLGYV 173
Query: 428 HGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSE 477
H +L N+L++ N +S+ G S+ L+ +++ G +TAPE +T S
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSS 233
Query: 478 QGDVFSFGVILLELLT 493
DV+SFGV++ E+L
Sbjct: 234 ASDVWSFGVVMWEVLA 249
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 84
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ + P + +A IA G+ ++ E H
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 137
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 198 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 243
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 39/283 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 84
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ + P + +A IA G+ ++ E H
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 137
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLD-----PKKTCLFSSNGYTAPEKTV----SEQG 479
+L+ +NIL+ EN +++ G ++ ++ ++ F +TAPE + + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKS 196
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP---- 535
DV+SFG++L EL T V G MV EV D +V + R P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPE 242
Query: 536 -LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 39/283 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 16 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 73
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ + P + +A IA G+ ++ E H
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 126
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLD-----PKKTCLFSSNGYTAPEKTV----SEQG 479
+L+ +NIL+ EN +++ G ++ ++ ++ F +TAPE + + +
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKS 185
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP---- 535
DV+SFG++L EL T V G MV EV D +V + R P
Sbjct: 186 DVWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPE 231
Query: 536 -LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 232 SLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 274
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 18 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 75
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ + P + +A IA G+ ++ E H
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 128
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 189 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 234
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 235 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 276
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 121 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGFVHRD 172
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 233 VWSYGIVLWEVMS 245
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 39/283 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 84
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ + P + +A IA G+ ++ E H
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 137
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLD-----PKKTCLFSSNGYTAPEKTV----SEQG 479
+L+ +NIL+ EN +++ G ++ ++ ++ F +TAPE + + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKS 196
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP---- 535
DV+SFG++L EL T V G MV EV D +V + R P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPE 242
Query: 536 -LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 29/171 (16%)
Query: 343 FSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLR 402
F + ++ + L+HPN+L + ++ + +Y G+L ++++ +PW R
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQR 110
Query: 403 LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL------- 455
+S A IA G+ +++ + I H +L N L+ EN++ ++++ G ++ +
Sbjct: 111 VSFAKDIASGMAYLHSMN-----IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 456 ---------DPKKTCLFSSNGY-TAPE----KTVSEQGDVFSFGVILLELL 492
D KK N Y APE ++ E+ DVFSFG++L E++
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 194 GQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 251
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ + P + +A IA G+ ++ E H
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 304
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G + ++ + + TAPE + + + D
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 365 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 410
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 411 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQPGEN 452
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 21/186 (11%)
Query: 323 KNSAVYAVKRLKKLQVSMD---EFSQTMRQIGNL--KHPNILPLVCYNSTNEEKLLVYKY 377
K + +A+K LKK V MD E + +++ +L +HP + + C T E V +Y
Sbjct: 41 KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEY 100
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNIL 437
+ G L+ +I+ F A I GL F++ K I + +LKL NIL
Sbjct: 101 LNGGDLM----YHIQSCHKFDLSRATFYAAEIILGLQFLHSKG-----IVYRDLKLDNIL 151
Query: 438 LNENEDPLISECGYSK---FLDPKKTCLFSSNGYTAPEKTVSEQG----DVFSFGVILLE 490
L+++ I++ G K D K + Y APE + ++ D +SFGV+L E
Sbjct: 152 LDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 211
Query: 491 LLTGKT 496
+L G++
Sbjct: 212 MLIGQS 217
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 84
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ + P + +A IA G+ ++ E H
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 137
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 198 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 243
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 49 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 108
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 109 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 160
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 161 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 220
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 221 VWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 32 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 91
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 92 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 143
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 144 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 203
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 204 VWSYGIVLWEVMS 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 121 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 172
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 233 VWSYGIVLWEVMS 245
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 17 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 74
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ P + +A IA G+ ++ E H
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 127
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 188 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 233
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 234 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 59 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 118
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 119 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 170
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 171 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 230
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 231 VWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 121 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 172
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 233 VWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 121 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 172
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 233 VWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 121 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 172
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 233 VWSYGIVLWEVMS 245
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 250
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ P + +A IA G+ ++ E H
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 303
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 364 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 409
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGEN 451
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 20 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 77
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ P + +A IA G+ ++ E H
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 130
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 191 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 236
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 237 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 278
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 112/253 (44%), Gaps = 35/253 (13%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +K+ +S DEF + + + NL H ++ L + ++ +Y +NG LL+ L
Sbjct: 37 AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR 96
Query: 389 AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
E + F + L + + + ++++ E K H +L N L+N+ +S+
Sbjct: 97 ---EMRHRFQTQQLLEMCKDVCEAMEYL-----ESKQFLHRDLAARNCLVNDQGVVKVSD 148
Query: 449 CGYSKF-LDPKKTCLFSSN---GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKT 500
G S++ LD + T S ++ PE S + D+++FGV++ E+ +
Sbjct: 149 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS------- 201
Query: 501 GIDLPKWVKAMVREEWTGEVFDKEVAKAGRQW-----AFPLLNVALKCVSNSPDDRPTMA 555
+ M E +T + +A+ R + + + + C D+RPT
Sbjct: 202 -------LGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 254
Query: 556 EVLERIEEVVNGN 568
+L I +V++ N
Sbjct: 255 ILLSNILDVMDEN 267
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 39/283 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + ++H ++ L Y +E
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVVSE 84
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ + P + +A IA G+ ++ E H
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 137
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLD-----PKKTCLFSSNGYTAPEKTV----SEQG 479
+L+ +NIL+ EN +++ G ++ ++ ++ F +TAPE + + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKS 196
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP---- 535
DV+SFG++L EL T V G MV EV D +V + R P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPE 242
Query: 536 -LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 250
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ P + +A IA G+ ++ E H
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 303
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 364 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 409
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGEN 451
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 39/283 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 84
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ + P + +A IA G+ ++ E H
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 137
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLD-----PKKTCLFSSNGYTAPEKTV----SEQG 479
+L +NIL+ EN +++ G ++ ++ ++ F +TAPE + + +
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKS 196
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP---- 535
DV+SFG++L EL T V G MV EV D +V + R P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPE 242
Query: 536 -LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 276 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 333
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ P + +A IA G+ ++ E H
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 386
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 447 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 492
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 493 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPGEN 534
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 317 LFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYK 376
++M NS AVK LK +S+ F + + L+H ++ L + E ++ +
Sbjct: 29 VWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITE 88
Query: 377 YQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNI 436
Y + GSLL L++ GK P KL + + IA+G+ ++ E K H +L+ +N+
Sbjct: 89 YMAKGSLLDFLKSDEGGKVLLP-KL-IDFSAQIAEGMAYI-----ERKNYIHRDLRAANV 141
Query: 437 LLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKT----VSEQGDVFSFGVIL 488
L++E+ I++ G ++ ++ + + TAPE + + DV+SFG++L
Sbjct: 142 LVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILL 201
Query: 489 LELLTGKTVEKTG 501
E++T + G
Sbjct: 202 YEIVTYGKIPYPG 214
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 193 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 250
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S GSLL L+ P + +A IA G+ ++ E H
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 303
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 364 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 409
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 451
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 39/283 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 84
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S G LL L+ + P + +A IA G+ ++ E H
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 137
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLD-----PKKTCLFSSNGYTAPEKTV----SEQG 479
+L+ +NIL+ EN +++ G ++ ++ ++ F +TAPE + + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKS 196
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP---- 535
DV+SFG++L EL T V G MV EV D +V + R P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPE 242
Query: 536 -LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKK--LQVSMDEFSQTMRQIGNLKHPNILPLVCYNST 367
S +C V + A+K LK + +F +G HPNI+ L +
Sbjct: 62 SGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121
Query: 368 NEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIP 427
++V +Y NGSL + L + +G+ F + + G+ G+ ++ +
Sbjct: 122 GRLAMIVTEYMENGSLDTFLRTH-DGQ--FTIMQLVGMLRGVGAGMRYL-----SDLGYV 173
Query: 428 HGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSE 477
H +L N+L++ N +S+ G S+ L+ ++ G +TAPE +T S
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSS 233
Query: 478 QGDVFSFGVILLELLT 493
DV+SFGV++ E+L
Sbjct: 234 ASDVWSFGVVMWEVLA 249
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 121 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 172
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G ++ L+ +++ G +T+PE + + D
Sbjct: 173 LAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 233 VWSYGIVLWEVMS 245
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 39/283 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 27 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 84
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y S G LL L+ + P + +A IA G+ ++ E H
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYV-----ERMNYVH 137
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLD-----PKKTCLFSSNGYTAPEKTV----SEQG 479
+L+ +NIL+ EN +++ G ++ ++ ++ F +TAPE + + +
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK-WTAPEAALYGRFTIKS 196
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP---- 535
DV+SFG++L EL T V G MV EV D +V + R P
Sbjct: 197 DVWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPE 242
Query: 536 -LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 31/245 (12%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
AVK +K+ +S DEF Q + + L HP ++ S +V +Y SNG LL+ L
Sbjct: 36 AVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR 95
Query: 389 AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
++ GK P +L L + + +G+ F+ E H +L N L++ + +S+
Sbjct: 96 SH--GKGLEPSQL-LEMCYDVCEGMAFL-----ESHQFIHRDLAARNCLVDRDLCVKVSD 147
Query: 449 CGYSKF-LDPKKTCLFSSNG------YTAPEK----TVSEQGDVFSFGVILLELLTGKTV 497
G +++ LD + SS G ++APE S + DV++FG+++ E+ ++
Sbjct: 148 FGMTRYVLDDQYV---SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF---SL 201
Query: 498 EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEV 557
K DL + +++ ++ +A + + C P+ RPT ++
Sbjct: 202 GKMPYDLYTNSEVVLKVSQGHRLYRPHLASD------TIYQIMYSCWHELPEKRPTFQQL 255
Query: 558 LERIE 562
L IE
Sbjct: 256 LSSIE 260
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 41/254 (16%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +K+ +S DEF + + + NL H ++ L + ++ +Y +NG LL+ L
Sbjct: 37 AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR 96
Query: 389 AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
E + F + L + + + ++++ E K H +L N L+N+ +S+
Sbjct: 97 ---EMRHRFQTQQLLEMCKDVCEAMEYL-----ESKQFLHRDLAARNCLVNDQGVVKVSD 148
Query: 449 CGYSKF-LDPKKTCLFSSNG------YTAPE----KTVSEQGDVFSFGVILLELLTGKTV 497
G S++ LD + T SS G ++ PE S + D+++FGV++ E+ +
Sbjct: 149 FGLSRYVLDDEYT---SSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---- 201
Query: 498 EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQW-----AFPLLNVALKCVSNSPDDRP 552
+ M E +T + +A+ R + + + + C D+RP
Sbjct: 202 ----------LGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERP 251
Query: 553 TMAEVLERIEEVVN 566
T +L I +V++
Sbjct: 252 TFKILLSNILDVMD 265
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 35/251 (13%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +K+ +S DEF + + + NL H ++ L + ++ +Y +NG LL+ L
Sbjct: 52 AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR 111
Query: 389 AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
E + F + L + + + ++++ E K H +L N L+N+ +S+
Sbjct: 112 ---EMRHRFQTQQLLEMCKDVCEAMEYL-----ESKQFLHRDLAARNCLVNDQGVVKVSD 163
Query: 449 CGYSKF-LDPKKTCLFSSN---GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKT 500
G S++ LD ++T S ++ PE S + D+++FGV++ E+ +
Sbjct: 164 FGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS------- 216
Query: 501 GIDLPKWVKAMVREEWTGEVFDKEVAKAGRQW-----AFPLLNVALKCVSNSPDDRPTMA 555
+ M E +T + +A+ R + + + + C D+RPT
Sbjct: 217 -------LGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 269
Query: 556 EVLERIEEVVN 566
+L I +V++
Sbjct: 270 ILLSNILDVMD 280
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 121 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 172
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G + L+ +++ G +T+PE + + D
Sbjct: 173 LAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 233 VWSYGIVLWEVMS 245
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 29/252 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 38 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYH 96
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L A + F K + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 97 HLHA---SETKFEMKKLIDIARQTARGMDYLHAKS-----IIHRDLKSNNIFLHEDNTVK 148
Query: 446 ISECGYSKFLDPKKTC-----LFSSNGYTAPE-------KTVSEQGDVFSFGVILLELLT 493
I + G + L S + APE S Q DV++FG++L EL+T
Sbjct: 149 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPT 553
G+ + + I+ + MV +++K + + +C+ D+RP+
Sbjct: 209 GQ-LPYSNINNRDQIIEMVGR----GSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPS 263
Query: 554 MAEVLERIEEVV 565
+L IEE+
Sbjct: 264 FPRILAEIEELA 275
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 35/251 (13%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +K+ +S DEF + + + NL H ++ L + ++ +Y +NG LL+ L
Sbjct: 32 AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR 91
Query: 389 AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
E + F + L + + + ++++ E K H +L N L+N+ +S+
Sbjct: 92 ---EMRHRFQTQQLLEMCKDVCEAMEYL-----ESKQFLHRDLAARNCLVNDQGVVKVSD 143
Query: 449 CGYSKF-LDPKKTCLFSSN---GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKT 500
G S++ LD + T S ++ PE S + D+++FGV++ E+ +
Sbjct: 144 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS------- 196
Query: 501 GIDLPKWVKAMVREEWTGEVFDKEVAKAGRQW-----AFPLLNVALKCVSNSPDDRPTMA 555
+ M E +T + +A+ R + + + + C D+RPT
Sbjct: 197 -------LGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 249
Query: 556 EVLERIEEVVN 566
+L I +V++
Sbjct: 250 ILLSNILDVMD 260
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 43/259 (16%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 50 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYH 108
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L A + F K + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 109 HLHA---SETKFEMKKLIDIARQTARGMDYLHAKS-----IIHRDLKSNNIFLHEDNTVK 160
Query: 446 ISECGYSK-------------------FLDPKKTCLFSSNGYTAPEKTVSEQGDVFSFGV 486
I + G + ++ P+ + SN Y S Q DV++FG+
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY-------SFQSDVYAFGI 213
Query: 487 ILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSN 546
+L EL+TG+ + + I+ + MV +++K + + +C+
Sbjct: 214 VLYELMTGQ-LPYSNINNRDQIIEMVGR----GSLSPDLSKVRSNCPKRMKRLMAECLKK 268
Query: 547 SPDDRPTMAEVLERIEEVV 565
D+RP+ +L IEE+
Sbjct: 269 KRDERPSFPRILAEIEELA 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 322 LKNSAVYAVKRL--------KKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLL 373
+K+ +V A+K L ++ EF + + + NL HPNI+ L Y + +
Sbjct: 41 VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRM 98
Query: 374 VYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKL 433
V ++ G L L ++ W ++L + IA G+++M N+ I H +L+
Sbjct: 99 VMEFVPCGDLYHRL---LDKAHPIKWSVKLRLMLDIALGIEYM---QNQNPPIVHRDLRS 152
Query: 434 SNILLNENED--PL---ISECGYSKFLDPKKTCLFSSNGYTAPE------KTVSEQGDVF 482
NI L ++ P+ +++ G S+ + L + + APE ++ +E+ D +
Sbjct: 153 PNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 483 SFGVILLELLTGK-TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVAL 541
SF +IL +LTG+ ++ K++ M+REE ++ R NV
Sbjct: 213 SFAMILYTILTGEGPFDEYSYGKIKFIN-MIREEGLRPTIPEDCPPRLR-------NVIE 264
Query: 542 KCVSNSPDDRPTMAEVLERIEEV 564
C S P RP + +++ + E+
Sbjct: 265 LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 35/251 (13%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +K+ +S DEF + + + NL H ++ L + ++ +Y +NG LL+ L
Sbjct: 36 AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR 95
Query: 389 AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
E + F + L + + + ++++ E K H +L N L+N+ +S+
Sbjct: 96 ---EMRHRFQTQQLLEMCKDVCEAMEYL-----ESKQFLHRDLAARNCLVNDQGVVKVSD 147
Query: 449 CGYSKF-LDPKKTCLFSSN---GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKT 500
G S++ LD + T S ++ PE S + D+++FGV++ E+ +
Sbjct: 148 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS------- 200
Query: 501 GIDLPKWVKAMVREEWTGEVFDKEVAKAGRQW-----AFPLLNVALKCVSNSPDDRPTMA 555
+ M E +T + +A+ R + + + + C D+RPT
Sbjct: 201 -------LGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 253
Query: 556 EVLERIEEVVN 566
+L I +V++
Sbjct: 254 ILLSNILDVMD 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +K+ +S D+F + + L HP ++ L LV+++ +G L
Sbjct: 55 AIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC----LS 110
Query: 389 AYIEGKRD-FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLIS 447
Y+ +R F + L + + +G+ ++ EE + H +L N L+ EN+ +S
Sbjct: 111 DYLRTQRGLFAAETLLGMCLDVCEGMAYL-----EEACVIHRDLAARNCLVGENQVIKVS 165
Query: 448 ECGYSKF-LDPKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLELLT-GK 495
+ G ++F LD + T SS G P K S + DV+SFGV++ E+ + GK
Sbjct: 166 DFGMTRFVLDDQYT---SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 222
Query: 496 TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMA 555
+ + +V + TG F + + ++N C P+DRP +
Sbjct: 223 IPYENRSN-----SEVVEDISTG--FRLYKPRLASTHVYQIMN---HCWKERPEDRPAFS 272
Query: 556 EVLERIEEV 564
+L ++ E+
Sbjct: 273 RLLRQLAEI 281
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 35/251 (13%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +K+ +S DEF + + + NL H ++ L + ++ +Y +NG LL+ L
Sbjct: 43 AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR 102
Query: 389 AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
E + F + L + + + ++++ E K H +L N L+N+ +S+
Sbjct: 103 ---EMRHRFQTQQLLEMCKDVCEAMEYL-----ESKQFLHRDLAARNCLVNDQGVVKVSD 154
Query: 449 CGYSKF-LDPKKTCLFSSN---GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKT 500
G S++ LD + T S ++ PE S + D+++FGV++ E+ +
Sbjct: 155 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS------- 207
Query: 501 GIDLPKWVKAMVREEWTGEVFDKEVAKAGRQW-----AFPLLNVALKCVSNSPDDRPTMA 555
+ M E +T + +A+ R + + + + C D+RPT
Sbjct: 208 -------LGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 260
Query: 556 EVLERIEEVVN 566
+L I +V++
Sbjct: 261 ILLSNILDVMD 271
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 43/259 (16%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 50 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYH 108
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L A + F K + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 109 HLHA---SETKFEMKKLIDIARQTARGMDYLHAKS-----IIHRDLKSNNIFLHEDNTVK 160
Query: 446 ISECGYSK-------------------FLDPKKTCLFSSNGYTAPEKTVSEQGDVFSFGV 486
I + G + ++ P+ + SN Y S Q DV++FG+
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY-------SFQSDVYAFGI 213
Query: 487 ILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSN 546
+L EL+TG+ + + I+ + MV +++K + + +C+
Sbjct: 214 VLYELMTGQ-LPYSNINNRDQIIEMVGR----GSLSPDLSKVRSNCPKRMKRLMAECLKK 268
Query: 547 SPDDRPTMAEVLERIEEVV 565
D+RP+ +L IEE+
Sbjct: 269 KRDERPSFPRILAEIEELA 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 322 LKNSAVYAVKRL--------KKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLL 373
+K+ +V A+K L ++ EF + + + NL HPNI+ L Y + +
Sbjct: 41 VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRM 98
Query: 374 VYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKL 433
V ++ G L L ++ W ++L + IA G+++M N+ I H +L+
Sbjct: 99 VMEFVPCGDLYHRL---LDKAHPIKWSVKLRLMLDIALGIEYM---QNQNPPIVHRDLRS 152
Query: 434 SNILLNENED--PL---ISECGYSKFLDPKKTCLFSSNGYTAPE------KTVSEQGDVF 482
NI L ++ P+ +++ G S+ + L + + APE ++ +E+ D +
Sbjct: 153 PNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 483 SFGVILLELLTGK-TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVAL 541
SF +IL +LTG+ ++ K++ M+REE ++ R NV
Sbjct: 213 SFAMILYTILTGEGPFDEYSYGKIKFIN-MIREEGLRPTIPEDCPPRLR-------NVIE 264
Query: 542 KCVSNSPDDRPTMAEVLERIEEV 564
C S P RP + +++ + E+
Sbjct: 265 LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 35/251 (13%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +K+ +S DEF + + + NL H ++ L + ++ +Y +NG LL+ L
Sbjct: 52 AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR 111
Query: 389 AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
E + F + L + + + ++++ E K H +L N L+N+ +S+
Sbjct: 112 ---EMRHRFQTQQLLEMCKDVCEAMEYL-----ESKQFLHRDLAARNCLVNDQGVVKVSD 163
Query: 449 CGYSKF-LDPKKTCLFSSN---GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKT 500
G S++ LD + T S ++ PE S + D+++FGV++ E+ +
Sbjct: 164 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS------- 216
Query: 501 GIDLPKWVKAMVREEWTGEVFDKEVAKAGRQW-----AFPLLNVALKCVSNSPDDRPTMA 555
+ M E +T + +A+ R + + + + C D+RPT
Sbjct: 217 -------LGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 269
Query: 556 EVLERIEEVVN 566
+L I +V++
Sbjct: 270 ILLSNILDVMD 280
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 118/274 (43%), Gaps = 47/274 (17%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 38 VCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKP 97
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V +Y NGSL + L+ + F + + GI+ G+ ++ + H +
Sbjct: 98 VMIVTEYMENGSLDTFLK---KNDGQFTVIQLVGMLRGISAGMKYL-----SDMGYVHRD 149
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +TAPE + + D
Sbjct: 150 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASD 209
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKA---GRQWAFP-- 535
V+S+G+++ E+++ + P W E+ +++V KA G + P
Sbjct: 210 VWSYGIVMWEVVSYG-------ERPYW-----------EMTNQDVIKAVEEGYRLPSPMD 251
Query: 536 ----LLNVALKCVSNSPDDRPTMAEVLERIEEVV 565
L + L C + RP E++ +++++
Sbjct: 252 CPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 47 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 106
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+A+ E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 107 LQAHAE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 157
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 215
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 216 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 274
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 275 NVNQRPSFRDLALRVDQI 292
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 33/184 (17%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRD 396
+++ Q + LKHPNI+ L VC N LV ++ G L +L GKR
Sbjct: 49 TIENVRQEAKLFAMLKHPNIIALRGVCLKEPN--LCLVMEFARGGPLNRVLS----GKR- 101
Query: 397 FPWKLRLSIATGIAKGLDFMYQKSNEEKTIP--HGNLKLSNILLNE--------NEDPLI 446
P + ++ A IA+G+++++ +E +P H +LK SNIL+ + N+ I
Sbjct: 102 IPPDILVNWAVQIARGMNYLH----DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157
Query: 447 SECGYSKFLDPKKTCLFSSNG---YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEK 499
++ G ++ + +T S+ G + APE S+ DV+S+GV+L ELLTG+ V
Sbjct: 158 TDFGLAR--EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE-VPF 214
Query: 500 TGID 503
GID
Sbjct: 215 RGID 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 39/283 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 24 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 81
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y + GSLL L+ P + +S IA G+ ++ E H
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ--IASGMAYV-----ERMNYVH 134
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLD-----PKKTCLFSSNGYTAPEKTV----SEQG 479
+L+ +NIL+ EN +++ G ++ ++ ++ F +TAPE + + +
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK-WTAPEAALYGRFTIKS 193
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP---- 535
DV+SFG++L EL T V G MV EV D +V + R P
Sbjct: 194 DVWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPE 239
Query: 536 -LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 240 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 282
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 22/195 (11%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLKK--LQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPN++ L + +
Sbjct: 49 VCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP 108
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
+++ ++ NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 109 VMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYL-----ADMNYVHRD 160
Query: 431 LKLSNILLNENEDPLISECGYSKFL-----DPKKTCLFSSN---GYTAPE----KTVSEQ 478
L NIL+N N +S+ G S+FL DP T +TAPE + +
Sbjct: 161 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 220
Query: 479 GDVFSFGVILLELLT 493
DV+S+G+++ E+++
Sbjct: 221 SDVWSYGIVMWEVMS 235
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
Q ++M + A+K LK +S + F Q + + L+H ++ L Y +E
Sbjct: 24 GQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSE 81
Query: 370 EKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
E + +V +Y + GSLL L+ P + +S IA G+ ++ E H
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ--IASGMAYV-----ERMNYVH 134
Query: 429 GNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGD 480
+L+ +NIL+ EN +++ G ++ ++ + + TAPE + + + D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP----- 535
V+SFG++L EL T V G MV EV D +V + R P
Sbjct: 195 VWSFGILLTELTTKGRVPYPG---------MVNR----EVLD-QVERGYRMPCPPECPES 240
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSN 577
L ++ +C P++RPT + +E+ + + + N
Sbjct: 241 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGEN 282
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V + NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 121 VMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGAVHRD 172
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 233 VWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 32 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 91
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V + NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 92 VMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 143
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 144 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 203
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 204 VWSYGIVLWEVMS 216
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 91/193 (47%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPN++ L + +
Sbjct: 59 VCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKP 118
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V ++ NG+L + L + +G+ F + + GIA G+ ++ + H +
Sbjct: 119 VMIVIEFMENGALDAFLRKH-DGQ--FTVIQLVGMLRGIAAGMRYL-----ADMGYVHRD 170
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ ++ ++++ G +TAPE + + D
Sbjct: 171 LAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASD 230
Query: 481 VFSFGVILLELLT 493
V+S+G+++ E+++
Sbjct: 231 VWSYGIVMWEVMS 243
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 324 NSAVYAVKRLKK-LQVSMDEFSQTMRQ---IGNLKHPNILPLVCYNSTNEEKLLVYKYQS 379
N YA+K LKK + V + + T + + + HP I+ + ++ ++ Y
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89
Query: 380 NGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLN 439
G L SLL + FP + A + L++++ K I + +LK NILL+
Sbjct: 90 GGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSKD-----IIYRDLKPENILLD 140
Query: 440 ENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTGK 495
+N I++ G++K++ L + Y APE K ++ D +SFG+++ E+L G
Sbjct: 141 KNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 200
Query: 496 T 496
T
Sbjct: 201 T 201
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPNI+ L + ++
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
++V + NGSL S L + F + + GIA G+ ++ + H +
Sbjct: 121 VMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYL-----SDMGYVHRD 172
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGD 480
L NIL+N N +S+ G S+ L+ +++ G +T+PE + + D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 481 VFSFGVILLELLT 493
V+S+G++L E+++
Sbjct: 233 VWSYGIVLWEVMS 245
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 45 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 104
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H NL NIL+ ENE+ +
Sbjct: 105 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRNLATRNILV-ENENRVK 155
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 213
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 214 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 272
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 273 NVNQRPSFRDLALRVDQI 290
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 45/239 (18%)
Query: 350 IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGI 409
+G H NI+ L S + +++ +Y NG+L L E +F + + GI
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR---EKDGEFSVLQLVGMLRGI 156
Query: 410 AKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-- 467
A G+ ++ H +L NIL+N N +S+ G S+ L+ ++++G
Sbjct: 157 AAGMKYL-----ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 468 ----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+TAPE + + DV+SFG+++ E++T + P W E
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG-------ERPYW-----------E 253
Query: 520 VFDKEVAKA---GRQWAFPL------LNVALKCVSNSPDDRPTMAEVLERIEEVVNGND 569
+ + EV KA G + P+ + ++C RP A+++ +++++ D
Sbjct: 254 LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 22/195 (11%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLKK--LQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+CS + K A+K LK + +F +G HPN++ L + +
Sbjct: 23 VCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP 82
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
+++ ++ NGSL S L + F + + GIA G+ ++ + H
Sbjct: 83 VMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYL-----ADMNYVHRA 134
Query: 431 LKLSNILLNENEDPLISECGYSKFL-----DPKKTCLFSSN---GYTAPE----KTVSEQ 478
L NIL+N N +S+ G S+FL DP T +TAPE + +
Sbjct: 135 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 194
Query: 479 GDVFSFGVILLELLT 493
DV+S+G+++ E+++
Sbjct: 195 SDVWSYGIVMWEVMS 209
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 36/263 (13%)
Query: 322 LKNSAVYAVKRL--------KKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLL 373
+K+ +V A+K L ++ EF + + + NL HPNI+ L Y + +
Sbjct: 41 VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRM 98
Query: 374 VYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKL 433
V ++ G L L ++ W ++L + IA G+++M N+ I H +L+
Sbjct: 99 VMEFVPCGDLYHRL---LDKAHPIKWSVKLRLMLDIALGIEYM---QNQNPPIVHRDLRS 152
Query: 434 SNILLNENED--PL---ISECGYSKFLDPKKTCLFSSNGYTAPE------KTVSEQGDVF 482
NI L ++ P+ +++ S+ + L + + APE ++ +E+ D +
Sbjct: 153 PNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 483 SFGVILLELLTGK-TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVAL 541
SF +IL +LTG+ ++ K++ M+REE ++ R NV
Sbjct: 213 SFAMILYTILTGEGPFDEYSYGKIKFIN-MIREEGLRPTIPEDCPPRLR-------NVIE 264
Query: 542 KCVSNSPDDRPTMAEVLERIEEV 564
C S P RP + +++ + E+
Sbjct: 265 LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 30/255 (11%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R KNS + A+K L K Q+ +R+ +L+HPNIL L Y +
Sbjct: 22 GNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDST 81
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ + F + + T +A L + + K + H
Sbjct: 82 RVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKK-----VIHR 132
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++ L + Y PE + E+ D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSL 192
Query: 485 GVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
GV+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 193 GVLCYEFLVGKPPFEANTYQDTY-KRISRVEFTFPDFVTEGAR----------DLISRLL 241
Query: 545 SNSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 242 KHNPSQRPMLREVLE 256
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 22/195 (11%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLKK--LQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+C K + A+K LK + EF +G +HPNI+ L + +
Sbjct: 32 VCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMP 91
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
+++ ++ NG+L S L F + + GIA G+ ++ E + H +
Sbjct: 92 VMILTEFMENGALDSFLRL---NDGQFTVIQLVGMLRGIASGMRYL-----AEMSYVHRD 143
Query: 431 LKLSNILLNENEDPLISECGYSKFL-----DPKKTCLFSSN---GYTAPE----KTVSEQ 478
L NIL+N N +S+ G S+FL DP +T +TAPE + +
Sbjct: 144 LAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSA 203
Query: 479 GDVFSFGVILLELLT 493
D +S+G+++ E+++
Sbjct: 204 SDAWSYGIVMWEVMS 218
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +++ +S ++F + + L HP ++ L LV+++ +G L
Sbjct: 33 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----S 88
Query: 389 AYIEGKRD-FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLIS 447
Y+ +R F + L + + +G+ ++ EE + H +L N L+ EN+ +S
Sbjct: 89 DYLRTQRGLFAAETLLGMCLDVCEGMAYL-----EEACVIHRDLAARNCLVGENQVIKVS 143
Query: 448 ECGYSKF-LDPKKTCLFSSNGYTAPEKTVS----------EQGDVFSFGVILLELLT-GK 495
+ G ++F LD + T SS G P K S + DV+SFGV++ E+ + GK
Sbjct: 144 DFGMTRFVLDDQYT---SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200
Query: 496 TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMA 555
+ + +V + TG F + + ++N C P+DRP +
Sbjct: 201 IPYENRSN-----SEVVEDISTG--FRLYKPRLASTHVYQIMN---HCWKERPEDRPAFS 250
Query: 556 EVLERIEEV 564
+L ++ E+
Sbjct: 251 RLLRQLAEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +++ +S ++F + + L HP ++ L LV+++ +G L
Sbjct: 35 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----S 90
Query: 389 AYIEGKRD-FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLIS 447
Y+ +R F + L + + +G+ ++ EE + H +L N L+ EN+ +S
Sbjct: 91 DYLRTQRGLFAAETLLGMCLDVCEGMAYL-----EEACVIHRDLAARNCLVGENQVIKVS 145
Query: 448 ECGYSKF-LDPKKTCLFSSNGYTAPEKTVS----------EQGDVFSFGVILLELLT-GK 495
+ G ++F LD + T SS G P K S + DV+SFGV++ E+ + GK
Sbjct: 146 DFGMTRFVLDDQYT---SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
Query: 496 TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMA 555
+ + +V + TG F + + ++N C P+DRP +
Sbjct: 203 IPYENRSN-----SEVVEDISTG--FRLYKPRLASTHVYQIMN---HCWKERPEDRPAFS 252
Query: 556 EVLERIEEV 564
+L ++ E+
Sbjct: 253 RLLRQLAEI 261
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 317 LFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYK 376
++M NS AVK LK +S+ F + + L+H ++ L + E ++ +
Sbjct: 28 VWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 87
Query: 377 YQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNI 436
+ + GSLL L++ GK P KL + + IA+G+ ++ E K H +L+ +N+
Sbjct: 88 FMAKGSLLDFLKSDEGGKVLLP-KL-IDFSAQIAEGMAYI-----ERKNYIHRDLRAANV 140
Query: 437 LLNENEDPLISECGYSKFLDPKKTCLFSSNGY----TAPEKT----VSEQGDVFSFGVIL 488
L++E+ I++ G ++ ++ + + TAPE + + +V+SFG++L
Sbjct: 141 LVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILL 200
Query: 489 LELLT 493
E++T
Sbjct: 201 YEIVT 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +++ +S ++F + + L HP ++ L LV+++ +G L
Sbjct: 38 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----S 93
Query: 389 AYIEGKRD-FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLIS 447
Y+ +R F + L + + +G+ ++ EE + H +L N L+ EN+ +S
Sbjct: 94 DYLRTQRGLFAAETLLGMCLDVCEGMAYL-----EEACVIHRDLAARNCLVGENQVIKVS 148
Query: 448 ECGYSKF-LDPKKTCLFSSNGYTAPEKTVS----------EQGDVFSFGVILLELLT-GK 495
+ G ++F LD + T SS G P K S + DV+SFGV++ E+ + GK
Sbjct: 149 DFGMTRFVLDDQYT---SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205
Query: 496 TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMA 555
+ + +V + TG F + + ++N C P+DRP +
Sbjct: 206 IPYENRSN-----SEVVEDISTG--FRLYKPRLASTHVYQIMN---HCWRERPEDRPAFS 255
Query: 556 EVLERIEEV 564
+L ++ E+
Sbjct: 256 RLLRQLAEI 264
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 44 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 103
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 104 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 154
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 212
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 213 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 271
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 272 NVNQRPSFRDLALRVDQI 289
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 62 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 121
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 122 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 172
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 230
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 231 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 289
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 290 NVNQRPSFRDLALRVDQI 307
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 49 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 108
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 109 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 159
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 217
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 218 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 276
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 277 NVNQRPSFRDLALRVDQI 294
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 43 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 102
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 103 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 153
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 211
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 212 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 270
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 271 NVNQRPSFRDLALRVDQI 288
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 42 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 101
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 102 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 152
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 210
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 211 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 269
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 270 NVNQRPSFRDLALRVDQI 287
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 51 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 110
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 111 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 161
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 219
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 220 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 278
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 279 NVNQRPSFRDLALRVDQI 296
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 62 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 121
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 122 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 172
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 230
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 231 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 289
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 290 NVNQRPSFRDLALRVDQI 307
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 48 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 107
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 108 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 158
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 216
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 217 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 275
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 276 NVNQRPSFRDLALRVDQI 293
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 44 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 103
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 104 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 154
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 212
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 213 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 271
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 272 NVNQRPSFRDLALRVDQI 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 47 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 106
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 107 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 157
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 215
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 216 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 274
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 275 NVNQRPSFRDLALRVDQI 292
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 22/195 (11%)
Query: 313 ICSSLFMVRLKNSAVYAVKRLKK--LQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE 370
+C K + A+K LK + EF +G +HPNI+ L + +
Sbjct: 30 VCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMP 89
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
+++ ++ NG+L S L F + + GIA G+ ++ E + H +
Sbjct: 90 VMILTEFMENGALDSFLRL---NDGQFTVIQLVGMLRGIASGMRYL-----AEMSYVHRD 141
Query: 431 LKLSNILLNENEDPLISECGYSKFL-----DPKKTCLFSSN---GYTAPE----KTVSEQ 478
L NIL+N N +S+ G S+FL DP T +TAPE + +
Sbjct: 142 LAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSA 201
Query: 479 GDVFSFGVILLELLT 493
D +S+G+++ E+++
Sbjct: 202 SDAWSYGIVMWEVMS 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 50 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 109
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 110 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 160
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 218
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 219 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 277
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 278 NVNQRPSFRDLALRVDQI 295
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 28 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G + L+ + F + + T +A L + + K + H +
Sbjct: 88 VYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 138
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 199 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 247
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 248 HNPSQRPMLREVLE 261
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 44 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 103
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 104 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 154
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 212
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 213 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 271
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 272 NVNQRPSFRDLALRVDQI 289
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ +Y GSL
Sbjct: 75 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 134
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 135 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 185
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 243
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 244 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 302
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 303 NVNQRPSFRDLALRVDQI 320
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 44/286 (15%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 24 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 83
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ + F + + T +A L + + K + H +
Sbjct: 84 VYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 134
Query: 431 LKLSNILLNENEDPLISECGYS-KFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 135 IKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 486 VILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
V+ E L GK T ++T K + R E+T F E A+ ++
Sbjct: 195 VLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------DL 237
Query: 540 ALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSMES 585
+ + ++P RP + EVLE + N + + N +S +S
Sbjct: 238 ISRLLKHNPSQRPMLREVLE--HPWITANSSKPSNSQNKESASKQS 281
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 28 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ + F + + T +A L + + K + H +
Sbjct: 88 VYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 138
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLG 198
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 199 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 247
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 248 HNPSQRPXLREVLE 261
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 32/280 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 23 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ F + + T +A L + + K + H +
Sbjct: 83 VYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHRD 133
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 194 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 242
Query: 546 NSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSMES 585
++P RP + EVLE + N + + N +S +S
Sbjct: 243 HNPSQRPMLREVLE--HPWITANSSKPSNCQNKESASKQS 280
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 30/279 (10%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 23 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ F + + T +A L + + K + H +
Sbjct: 83 VYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHRD 133
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 194 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 242
Query: 546 NSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSME 584
++P RP + EVLE N + + + S+ +++E
Sbjct: 243 HNPSQRPMLREVLEHPWITANSSKPSNCQNKESAAAALE 281
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 26 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 85
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 86 RVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHR 136
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++T L + Y PE + E+ D++S
Sbjct: 137 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196
Query: 485 GVILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L GK T ++T K + R E+T F E A+ +
Sbjct: 197 GVLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------D 239
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++P RP + EVLE
Sbjct: 240 LISRLLKHNPSQRPMLREVLE 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 26 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ F + + T +A L + + K + H +
Sbjct: 86 VYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHRD 136
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 197 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 245
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 246 HNPSQRPMLREVLE 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 25 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 84
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 85 RVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHR 135
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++T L + Y PE + E+ D++S
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 195
Query: 485 GVILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L GK T ++T K + R E+T F E A+ +
Sbjct: 196 GVLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------D 238
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++P RP + EVLE
Sbjct: 239 LISRLLKHNPSQRPMLREVLE 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 21 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 80
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 81 RVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHR 131
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++T L + Y PE + E+ D++S
Sbjct: 132 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 191
Query: 485 GVILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L GK T ++T K + R E+T F E A+ +
Sbjct: 192 GVLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------D 234
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++P RP + EVLE
Sbjct: 235 LISRLLKHNPSQRPMLREVLE 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 28 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ + F + + T +A L + + K + H +
Sbjct: 88 VYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 138
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 199 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 247
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 248 HNPSQRPMLREVLE 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 81
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 82 RVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHR 132
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++T L + Y PE + E+ D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSL 192
Query: 485 GVILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L GK T ++T K + R E+T F E A+ +
Sbjct: 193 GVLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------D 235
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++P RP + EVLE
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 40 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 99
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ F + + T +A L + + K + H +
Sbjct: 100 VYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHRD 150
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 151 IKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 210
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 211 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 259
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 260 HNPSQRPMLREVLE 273
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +++ +S ++F + + L HP ++ L LV+++ +G L
Sbjct: 35 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----S 90
Query: 389 AYIEGKRD-FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLIS 447
Y+ +R F + L + + +G+ ++ EE ++ H +L N L+ EN+ +S
Sbjct: 91 DYLRTQRGLFAAETLLGMCLDVCEGMAYL-----EEASVIHRDLAARNCLVGENQVIKVS 145
Query: 448 ECGYSKF-LDPKKTCLFSSNGYTAPEKTVS----------EQGDVFSFGVILLELLT-GK 495
+ G ++F LD + T SS G P K S + DV+SFGV++ E+ + GK
Sbjct: 146 DFGMTRFVLDDQYT---SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
Query: 496 TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMA 555
+ + +V + TG F + + ++N C P+DRP +
Sbjct: 203 IPYENRSN-----SEVVEDISTG--FRLYKPRLASTHVYQIMN---HCWKERPEDRPAFS 252
Query: 556 EVLERIEEV 564
+L ++ +
Sbjct: 253 RLLRQLAAI 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 49 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 108
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ F + + T +A L + + K + H +
Sbjct: 109 VYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHRD 159
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 160 IKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 220 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 268
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 269 HNPSQRPMLREVLE 282
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 23 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ + F + + T +A L + + K + H +
Sbjct: 83 VYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 133
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 194 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 242
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 243 HNPSQRPMLREVLE 256
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 333 LKKLQVSMDE----FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSL 386
+KKLQ S +E F + + + +L+H NI+ VCY++ L+ ++ GSL
Sbjct: 47 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREY 106
Query: 387 LEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL- 445
L+ + E R KL L + I KG++++ K H +L NIL+ ENE+ +
Sbjct: 107 LQKHKE--RIDHIKL-LQYTSQICKGMEYL-----GTKRYIHRDLATRNILV-ENENRVK 157
Query: 446 ISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGK 495
I + G +K L +P ++ +F + E S DV+SFGV+L EL T
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-- 215
Query: 496 TVEKTGIDLPKWVKAMVREEWTGE--VFD-----KEVAKAGRQWAFP--LLNVALKCVSN 546
+EK+ P M+ + G+ VF K + R P + + +C +N
Sbjct: 216 YIEKSK-SPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 274
Query: 547 SPDDRPTMAEVLERIEEV 564
+ + RP+ ++ R++++
Sbjct: 275 NVNQRPSFRDLALRVDQI 292
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 42/260 (16%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 28 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ + F + + T +A L + + K + H +
Sbjct: 88 VYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 138
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 486 VILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
V+ E L GK T ++T K + R E+T F E A+ ++
Sbjct: 199 VLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------DL 241
Query: 540 ALKCVSNSPDDRPTMAEVLE 559
+ + ++P RP + EVLE
Sbjct: 242 ISRLLKHNPSQRPMLREVLE 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 26 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ F + + T +A L + + K + H +
Sbjct: 86 VYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHRD 136
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I+ G+S ++T L + Y PE + E+ D++S G
Sbjct: 137 IKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 197 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 245
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 246 HNPSQRPMLREVLE 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 25 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 84
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ F + + T +A L + + K + H +
Sbjct: 85 VYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHRD 135
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I+ G+S ++T L + Y PE + E+ D++S G
Sbjct: 136 IKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 195
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 196 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 244
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 245 HNPSQRPMLREVLE 258
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 24 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 83
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ + F + + T +A L + + K + H +
Sbjct: 84 VYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 134
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 195 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 243
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 244 HNPSQRPMLREVLE 257
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 32/280 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 23 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 82
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ F + + T +A L + + K + H +
Sbjct: 83 VYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHRD 133
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++T L + Y PE + E+ D++S G
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 194 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 242
Query: 546 NSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSMES 585
++P RP + EVLE + N + + N +S +S
Sbjct: 243 HNPSQRPMLREVLE--HPWITANSSKPSNCQNKESASKQS 280
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 35/249 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE 388
A+K +++ +S ++F + + L HP ++ L LV ++ +G L
Sbjct: 36 AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCL----S 91
Query: 389 AYIEGKRD-FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLIS 447
Y+ +R F + L + + +G+ ++ EE + H +L N L+ EN+ +S
Sbjct: 92 DYLRTQRGLFAAETLLGMCLDVCEGMAYL-----EEACVIHRDLAARNCLVGENQVIKVS 146
Query: 448 ECGYSKF-LDPKKTCLFSSNGYTAPEKTVS----------EQGDVFSFGVILLELLT-GK 495
+ G ++F LD + T SS G P K S + DV+SFGV++ E+ + GK
Sbjct: 147 DFGMTRFVLDDQYT---SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
Query: 496 TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMA 555
+ + +V + TG F + + ++N C P+DRP +
Sbjct: 204 IPYENRSN-----SEVVEDISTG--FRLYKPRLASTHVYQIMN---HCWRERPEDRPAFS 253
Query: 556 EVLERIEEV 564
+L ++ E+
Sbjct: 254 RLLRQLAEI 262
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 354 KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGL 413
+H NIL + Y ST + +V ++ SL L IE K F + IA A+G+
Sbjct: 89 RHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHI-IETK--FEMIKLIDIARQTAQGM 144
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLD-----PKKTCLFSSNGY 468
D+++ KS I H +LK +NI L+E+ I + G + + L S +
Sbjct: 145 DYLHAKS-----IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 469 TAPE-------KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVF 521
APE S Q DV++FG++L EL+TG+ + + I+ + MV +
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMVGRGY----L 254
Query: 522 DKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIE 562
+++K + + +C+ D+RP ++L IE
Sbjct: 255 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 81
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 82 RVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHR 132
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++ L + Y PE + E+ D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSL 192
Query: 485 GVILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L GK T ++T K + R E+T F E A+ +
Sbjct: 193 GVLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------D 235
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++P RP + EVLE
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 26 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 85
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ F + + T +A L + + K + H +
Sbjct: 86 VYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHRD 136
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++ L + Y PE + E+ D++S G
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 197 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 245
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 246 HNPSQRPMLREVLE 259
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 29/249 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 36 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYH 94
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L IE K F + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 95 HLHI-IETK--FEMIKLIDIARQTAQGMDYLHAKS-----IIHRDLKSNNIFLHEDLTVK 146
Query: 446 ISECGYSKFLD-----PKKTCLFSSNGYTAPE-------KTVSEQGDVFSFGVILLELLT 493
I + G + + L S + APE S Q DV++FG++L EL+T
Sbjct: 147 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPT 553
G+ + + I+ + MV + +++K + + +C+ D+RP
Sbjct: 207 GQ-LPYSNINNRDQIIFMVGRGY----LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 261
Query: 554 MAEVLERIE 562
++L IE
Sbjct: 262 FPQILASIE 270
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 26/221 (11%)
Query: 354 KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGL 413
+H NIL + Y ST + +V ++ SL L IE K F + IA A+G+
Sbjct: 90 RHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHI-IETK--FEMIKLIDIARQTAQGM 145
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTC-----LFSSNGY 468
D+++ KS I H +LK +NI L+E+ I + G + L S +
Sbjct: 146 DYLHAKS-----IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 469 TAPE-------KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVF 521
APE S Q DV++FG++L EL+TG+ + + I+ + MV +
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINNRDQIIFMVGRGY----L 255
Query: 522 DKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIE 562
+++K + + +C+ D+RP ++L IE
Sbjct: 256 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 29/249 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 39 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYH 97
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L IE K F + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 98 HLHI-IETK--FEMIKLIDIARQTAQGMDYLHAKS-----IIHRDLKSNNIFLHEDLTVK 149
Query: 446 ISECGYSKFLD-----PKKTCLFSSNGYTAPE-------KTVSEQGDVFSFGVILLELLT 493
I + G + + L S + APE S Q DV++FG++L EL+T
Sbjct: 150 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPT 553
G+ + + I+ + MV + +++K + + +C+ D+RP
Sbjct: 210 GQ-LPYSNINNRDQIIFMVGRGY----LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 264
Query: 554 MAEVLERIE 562
++L IE
Sbjct: 265 FPQILASIE 273
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R K + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 19 GNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 78
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 79 RVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHR 129
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++T L + Y PE + E+ D++S
Sbjct: 130 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 189
Query: 485 GVILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L GK T ++T K + R E+T F E A+ +
Sbjct: 190 GVLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------D 232
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++P RP + EVLE
Sbjct: 233 LISRLLKHNPSQRPMLREVLE 253
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 42/260 (16%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 28 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 87
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G + L+ + F + + T +A L + + K + H +
Sbjct: 88 VYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 138
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++ L + Y PE + E+ D++S G
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 486 VILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
V+ E L GK T ++T K + R E+T F E A+ ++
Sbjct: 199 VLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------DL 241
Query: 540 ALKCVSNSPDDRPTMAEVLE 559
+ + ++P RP + EVLE
Sbjct: 242 ISRLLKHNPSQRPMLREVLE 261
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 62 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYH 120
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L IE K F + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 121 HLHI-IETK--FEMIKLIDIARQTAQGMDYLHAKS-----IIHRDLKSNNIFLHEDLTVK 172
Query: 446 ISECGY----SKFLDPKK-TCLFSSNGYTAPE-------KTVSEQGDVFSFGVILLELLT 493
I + G S++ + L S + APE S Q DV++FG++L EL+T
Sbjct: 173 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPT 553
G+ + + I+ + MV + +++K + + +C+ D+RP
Sbjct: 233 GQ-LPYSNINNRDQIIFMVGRGY----LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 287
Query: 554 MAEVLERIE 562
++L IE
Sbjct: 288 FPQILASIE 296
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW----- 399
+ M+ IG KH NI+ L+ + + ++ +Y S G+L L+A +F +
Sbjct: 85 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 400 -------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS 452
K +S A +A+G++++ K K I H +L N+L+ E+ I++ G +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASK----KCI-HRDLAARNVLVTEDNVMKIADFGLA 197
Query: 453 KFLDPKKTCLFSSNG-----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + ++NG + APE + + Q DV+SFGV+L E+ T G+
Sbjct: 198 RDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 504 LPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ + K +++E G DK L + C P RPT +++E ++
Sbjct: 258 VEELFK-LLKE---GHRMDKPSNCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
Query: 564 VV 565
+V
Sbjct: 309 IV 310
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 54 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYH 112
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L IE K F + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 113 HLHI-IETK--FEMIKLIDIARQTAQGMDYLHAKS-----IIHRDLKSNNIFLHEDLTVK 164
Query: 446 ISECGY----SKFLDPKK-TCLFSSNGYTAPE-------KTVSEQGDVFSFGVILLELLT 493
I + G S++ + L S + APE S Q DV++FG++L EL+T
Sbjct: 165 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPT 553
G+ + + I+ + MV + +++K + + +C+ D+RP
Sbjct: 225 GQ-LPYSNINNRDQIIFMVGRGY----LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 279
Query: 554 MAEVLERIE 562
++L IE
Sbjct: 280 FPQILASIE 288
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 331 KRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAY 390
++L++++ + + +RQ+ HP+I+ L+ ++ LV+ G L Y
Sbjct: 137 EQLEEVREATRRETHILRQVAG--HPHIITLIDSYESSSFMFLVFDLMRKGELFD----Y 190
Query: 391 IEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECG 450
+ K K SI + + + F++ + I H +LK NILL++N +S+ G
Sbjct: 191 LTEKVALSEKETRSIMRSLLEAVSFLHANN-----IVHRDLKPENILLDDNMQIRLSDFG 245
Query: 451 YSKFLDPKKTC--LFSSNGYTAPE----------KTVSEQGDVFSFGVILLELLTG 494
+S L+P + L + GY APE ++ D+++ GVIL LL G
Sbjct: 246 FSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 29/249 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 34 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYH 92
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L IE K F + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 93 HLHI-IETK--FEMIKLIDIARQTAQGMDYLHAKS-----IIHRDLKSNNIFLHEDLTVK 144
Query: 446 ISECGYSKFLD-----PKKTCLFSSNGYTAPE-------KTVSEQGDVFSFGVILLELLT 493
I + G + + L S + APE S Q DV++FG++L EL+T
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPT 553
G+ + + I+ + MV + +++K + + +C+ D+RP
Sbjct: 205 GQ-LPYSNINNRDQIIFMVGRGY----LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 259
Query: 554 MAEVLERIE 562
++L IE
Sbjct: 260 FPQILASIE 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 29/249 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 39 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYH 97
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L IE K F + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 98 HLHI-IETK--FEMIKLIDIARQTAQGMDYLHAKS-----IIHRDLKSNNIFLHEDLTVK 149
Query: 446 ISECGYSKFLD-----PKKTCLFSSNGYTAPE-------KTVSEQGDVFSFGVILLELLT 493
I + G + + L S + APE S Q DV++FG++L EL+T
Sbjct: 150 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPT 553
G+ + + I+ + MV + +++K + + +C+ D+RP
Sbjct: 210 GQ-LPYSNINNRDQIIFMVGRGY----LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 264
Query: 554 MAEVLERIE 562
++L IE
Sbjct: 265 FPQILASIE 273
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 120/280 (42%), Gaps = 51/280 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 63 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 120
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ F+ K H +L N +L+E
Sbjct: 121 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-----ASKKFVHRDLAARNCMLDEK 170
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLE 490
+++ G ++ LD + + + G P K + + DV+SFGV+L E
Sbjct: 171 FTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 230
Query: 491 LLTGKT---VEKTGIDLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 231 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 275
Query: 545 SNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSME 584
+ RP+ +E++ RI + + H N+++ +++
Sbjct: 276 HPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVNVK 315
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 24 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 83
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ + F + + T +A L + + K + H +
Sbjct: 84 VYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 134
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++ L + Y PE + E+ D++S G
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 195 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 243
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 244 HNPSQRPMLREVLE 257
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK + K Q++ + R++ +K HPNI+ L T + LV +Y S G +
Sbjct: 43 AVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 386 LLEAYIEGK-RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
L A+ K ++ K R I + + +Q K I H +LK N+LL+ + +
Sbjct: 103 YLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ-----KFIVHRDLKAENLLLDADMNI 152
Query: 445 LISECGYS-KFLDPKKTCLF-SSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S +F K F S Y APE K + DV+S GVIL L++G
Sbjct: 153 KIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 21/177 (11%)
Query: 329 AVKRLKKLQV---SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK + K Q+ S+ + + +R + L HPNI+ L T + LV +Y S G +
Sbjct: 44 AVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 103
Query: 386 LLEAYIEGK-RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
L A+ K ++ K R I + + +QK I H +LK N+LL+ + +
Sbjct: 104 YLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKY-----IVHRDLKAENLLLDGDMNI 153
Query: 445 LISECGYS-KFLDPKKTCLF-SSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S +F K F S Y APE K + DV+S GVIL L++G
Sbjct: 154 KIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK + K Q++ + R++ +K HPNI+ L T + LV +Y S G +
Sbjct: 43 AVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 386 LLEAYIEGK-RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
L A+ K ++ K R I + + +Q K I H +LK N+LL+ + +
Sbjct: 103 YLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ-----KFIVHRDLKAENLLLDADMNI 152
Query: 445 LISECGYS-KFLDPKKTCLF-SSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S +F K F S Y APE K + DV+S GVIL L++G
Sbjct: 153 KIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 22 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 81
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 82 RVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHR 132
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++ L + Y PE + E+ D++S
Sbjct: 133 DIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL 192
Query: 485 GVILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L GK T ++T K + R E+T F E A+ +
Sbjct: 193 GVLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------D 235
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++P RP + EVLE
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 34 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYH 92
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L IE K F + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 93 HLHI-IETK--FEMIKLIDIARQTAQGMDYLHAKS-----IIHRDLKSNNIFLHEDLTVK 144
Query: 446 ISECGY----SKFLDPKK-TCLFSSNGYTAPE-------KTVSEQGDVFSFGVILLELLT 493
I + G S++ + L S + APE S Q DV++FG++L EL+T
Sbjct: 145 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPT 553
G+ + + I+ + MV + +++K + + +C+ D+RP
Sbjct: 205 GQ-LPYSNINNRDQIIFMVGRGY----LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 259
Query: 554 MAEVLERIE 562
++L IE
Sbjct: 260 FPQILASIE 268
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 29/249 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK L + + ++G L+ H NIL + Y ST + +V ++ SL
Sbjct: 34 AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYH 92
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L IE K F + IA A+G+D+++ KS I H +LK +NI L+E+
Sbjct: 93 HLHI-IETK--FEMIKLIDIARQTAQGMDYLHAKS-----IIHRDLKSNNIFLHEDLTVK 144
Query: 446 ISECGYSKFLD-----PKKTCLFSSNGYTAPE-------KTVSEQGDVFSFGVILLELLT 493
I + G + + L S + APE S Q DV++FG++L EL+T
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPT 553
G+ + + I+ + MV + +++K + + +C+ D+RP
Sbjct: 205 GQ-LPYSNINNRDQIIFMVGRGY----LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 259
Query: 554 MAEVLERIE 562
++L IE
Sbjct: 260 FPQILASIE 268
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 25 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 84
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ + F + + T +A L + + K + H +
Sbjct: 85 VYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 135
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++ L + Y PE + E+ D++S G
Sbjct: 136 IKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 195
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 196 VLCYEFLVGKPPFEANTYQETY-KRISRVEFTFPDFVTEGAR----------DLISRLLK 244
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 245 HNPSQRPMLREVLE 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 25 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 84
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 85 RVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-----VIHR 135
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++ L + Y PE + E+ D++S
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL 195
Query: 485 GVILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L GK T ++T K + R E+T F E A+ +
Sbjct: 196 GVLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------D 238
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++P RP + EVLE
Sbjct: 239 LISRLLKHNPSQRPMLREVLE 259
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW----- 399
+ M+ IG KH NI+ L+ + + ++ +Y S G+L L+A ++ +
Sbjct: 78 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 400 -------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS 452
K +S A +A+G++++ K K I H +L N+L+ E+ I++ G +
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASK----KCI-HRDLAARNVLVTEDNVMKIADFGLA 190
Query: 453 KFLDPKKTCLFSSNG-----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + ++NG + APE + + Q DV+SFGV+L E+ T G+
Sbjct: 191 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 250
Query: 504 LPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ + K +++E G DK L + C P RPT +++E ++
Sbjct: 251 VEELFK-LLKE---GHRMDKPSNCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 301
Query: 564 VV 565
+V
Sbjct: 302 IV 303
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW----- 399
+ M+ IG KH NI+ L+ + + ++ +Y S G+L L+A ++ +
Sbjct: 74 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 400 -------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS 452
K +S A +A+G++++ K K I H +L N+L+ E+ I++ G +
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASK----KCI-HRDLAARNVLVTEDNVMKIADFGLA 186
Query: 453 KFLDPKKTCLFSSNG-----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + ++NG + APE + + Q DV+SFGV+L E+ T G+
Sbjct: 187 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 246
Query: 504 LPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ + K +++E G DK L + C P RPT +++E ++
Sbjct: 247 VEELFK-LLKE---GHRMDKPSNCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 297
Query: 564 VV 565
+V
Sbjct: 298 IV 299
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW----- 399
+ M+ IG KH NI+ L+ + + ++ +Y S G+L L+A ++ +
Sbjct: 85 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 400 -------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS 452
K +S A +A+G++++ K K I H +L N+L+ E+ I++ G +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASK----KCI-HRDLAARNVLVTEDNVMKIADFGLA 197
Query: 453 KFLDPKKTCLFSSNG-----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + ++NG + APE + + Q DV+SFGV+L E+ T G+
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 504 LPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ + K +++E G DK L + C P RPT +++E ++
Sbjct: 258 VEELFK-LLKE---GHRMDKPSNCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
Query: 564 VV 565
+V
Sbjct: 309 IV 310
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW----- 399
+ M+ IG KH NI+ L+ + + ++ +Y S G+L L+A ++ +
Sbjct: 77 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 400 -------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS 452
K +S A +A+G++++ K K I H +L N+L+ E+ I++ G +
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASK----KCI-HRDLAARNVLVTEDNVMKIADFGLA 189
Query: 453 KFLDPKKTCLFSSNG-----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + ++NG + APE + + Q DV+SFGV+L E+ T G+
Sbjct: 190 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 249
Query: 504 LPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ + K +++E G DK L + C P RPT +++E ++
Sbjct: 250 VEELFK-LLKE---GHRMDKPSNCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 300
Query: 564 VV 565
+V
Sbjct: 301 IV 302
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 47/253 (18%)
Query: 328 YAVKRLKKLQVSMDEFSQTMRQIG---NLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
Y +K + ++S E ++ R++ N+KHPNI V Y + EE NGSL
Sbjct: 52 YVIKEINISRMSSKEREESRREVAVLANMKHPNI---VQYRESFEE---------NGSLY 99
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIA----KGLDFMYQ-----KSNEEKTIPHGNLKLSN 435
+++ Y EG F R++ G+ + LD+ Q K ++ I H ++K N
Sbjct: 100 IVMD-YCEGGDLFK---RINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQN 155
Query: 436 ILLNENEDPLISECGYSKFLDP----KKTCLFSSNGYTAPE----KTVSEQGDVFSFGVI 487
I L ++ + + G ++ L+ + C+ + Y +PE K + + D+++ G +
Sbjct: 156 IFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICENKPYNNKSDIWALGCV 214
Query: 488 LLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNS 547
L EL T K + G +K +V + +G +++ L ++ + +
Sbjct: 215 LYELCTLKHAFEAG-----SMKNLVLKIISG-----SFPPVSLHYSYDLRSLVSQLFKRN 264
Query: 548 PDDRPTMAEVLER 560
P DRP++ +LE+
Sbjct: 265 PRDRPSVNSILEK 277
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW----- 399
+ M+ IG KH NI+ L+ + + ++ +Y S G+L L+A ++ +
Sbjct: 85 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 400 -------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS 452
K +S A +A+G++++ K K I H +L N+L+ E+ I++ G +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASK----KCI-HRDLAARNVLVTEDNVMKIADFGLA 197
Query: 453 KFLDPKKTCLFSSNG-----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + ++NG + APE + + Q DV+SFGV+L E+ T G+
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 504 LPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ + K +++E G DK L + C P RPT +++E ++
Sbjct: 258 VEELFK-LLKE---GHRMDKPSNCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
Query: 564 VV 565
+V
Sbjct: 309 IV 310
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV-SMDEFSQTMRQ---IGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + ++ R+ + L HP + L +E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 106 KLYFGLSYAKNGCLLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 156
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ S+ D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSD 216
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 387 LEAYIEGKR--DFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
LE +IE +R L L + I KG+D+++ K + H +LK SNI L + +
Sbjct: 121 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-----LIHRDLKPSNIFLVDTKQV 175
Query: 445 LISECGYSKFL--DPKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLELLTGKTVE 498
I + G L D K+T + Y +PE+ S+ + D+++ G+IL ELL V
Sbjct: 176 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VC 232
Query: 499 KTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVL 558
T + K+ + R+ ++FDK+ + K +S P+DRP +E+L
Sbjct: 233 DTAFETSKFFTDL-RDGIISDIFDKKEK-----------TLLQKLLSKKPEDRPNTSEIL 280
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 280 EVRRSELVFFVNEKERFK--LDDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQ 337
E +R L F+ +K++ DD E ++L + +F V K S + ++L L+
Sbjct: 46 EQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLE 104
Query: 338 VSMDEFSQTMRQIGNLKH---PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGK 394
+ +Q +R++ L P I+ ++ E + ++ GSL +L+ G+
Sbjct: 105 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR 162
Query: 395 RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-K 453
P ++ ++ + KGL ++ E+ I H ++K SNIL+N + + + G S +
Sbjct: 163 --IPEQILGKVSIAVIKGLTYL----REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 216
Query: 454 FLDPKKTCLFSSNGYTAPEKT----VSEQGDVFSFGVILLELLTGK 495
+D + Y +PE+ S Q D++S G+ L+E+ G+
Sbjct: 217 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 280 EVRRSELVFFVNEKERFK--LDDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQ 337
E +R L F+ +K++ DD E ++L + +F V K S + ++L L+
Sbjct: 11 EQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLE 69
Query: 338 VSMDEFSQTMRQIGNLKH---PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGK 394
+ +Q +R++ L P I+ ++ E + ++ GSL +L+ G+
Sbjct: 70 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR 127
Query: 395 RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-K 453
P ++ ++ + KGL ++ +K I H ++K SNIL+N + + + G S +
Sbjct: 128 --IPEQILGKVSIAVIKGLTYLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQ 181
Query: 454 FLDPKKTCLFSSNGYTAPEKT----VSEQGDVFSFGVILLELLTGK 495
+D + Y +PE+ S Q D++S G+ L+E+ G+
Sbjct: 182 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 25 GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 84
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ + F + + T +A L + + K + H
Sbjct: 85 RVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHR 135
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL + I++ G+S ++ L + Y PE + E+ D++S
Sbjct: 136 DIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSL 195
Query: 485 GVILLELLTGK------TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L GK T ++T K + R E+T F E A+ +
Sbjct: 196 GVLCYEFLVGKPPFEANTYQET-------YKRISRVEFTFPDFVTEGAR----------D 238
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++P RP + EVLE
Sbjct: 239 LISRLLKHNPSQRPMLREVLE 259
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW----- 399
+ M+ IG KH NI+ L+ + + ++ +Y S G+L L+A ++ +
Sbjct: 70 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 400 -------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS 452
K +S A +A+G++++ K K I H +L N+L+ E+ I++ G +
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLASK----KCI-HRDLAARNVLVTEDNVMKIADFGLA 182
Query: 453 KFLDPKKTCLFSSNG-----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + ++NG + APE + + Q DV+SFGV+L E+ T G+
Sbjct: 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 242
Query: 504 LPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ + K +++E G DK L + C P RPT +++E ++
Sbjct: 243 VEELFK-LLKE---GHRMDKPSNCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 293
Query: 564 VV 565
+V
Sbjct: 294 IV 295
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW----- 399
+ M+ IG KH NI+ L+ + + ++ +Y S G+L L+A ++ +
Sbjct: 126 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 400 -------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS 452
K +S A +A+G++++ K K I H +L N+L+ E+ I++ G +
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASK----KCI-HRDLAARNVLVTEDNVMKIADFGLA 238
Query: 453 KFLDPKKTCLFSSNG-----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + ++NG + APE + + Q DV+SFGV+L E+ T G+
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298
Query: 504 LPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ + K +++E G DK L + C P RPT +++E ++
Sbjct: 299 VEELFK-LLKE---GHRMDKPSNCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 349
Query: 564 VV 565
+V
Sbjct: 350 IV 351
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIITLLGACTQDGPLYVIVEY 122
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 178
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 179 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 288
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQI---GNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK + K Q++ + R++ L HPNI+ L T + LV +Y S G +
Sbjct: 43 AVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFD 102
Query: 386 LLEAYIEGK-RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
L A+ K ++ K R I + + +Q K I H +LK N+LL+ + +
Sbjct: 103 YLVAHGRXKEKEARAKFR-----QIVSAVQYCHQ-----KFIVHRDLKAENLLLDADXNI 152
Query: 445 LISECGYS-KFLDPKKTCLF-SSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S +F K F + Y APE K + DV+S GVIL L++G
Sbjct: 153 KIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 148 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 254
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDR 573
+ + +A + L C P RPT +E++E + ++ N ++DR
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK + K Q++ + R++ +K HPNI+ L T + LV +Y S G +
Sbjct: 43 AVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 386 LLEAYIEGK-RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
L A+ K ++ K R I + + +Q K I H +LK N+LL+ + +
Sbjct: 103 YLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ-----KFIVHRDLKAENLLLDADMNI 152
Query: 445 LISECGYS-KFLDPKKTCLF-SSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S +F K F + Y APE K + DV+S GVIL L++G
Sbjct: 153 KIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AV+ + K Q++ + R++ +K HPNI+ L T + LV +Y S G +
Sbjct: 43 AVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 386 LLEAYIEGK-RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
L A+ K ++ K R I + + +Q K I H +LK N+LL+ + +
Sbjct: 103 YLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ-----KFIVHRDLKAENLLLDADMNI 152
Query: 445 LISECGYS-KFLDPKKTCLF-SSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S +F K F S Y APE K + DV+S GVIL L++G
Sbjct: 153 KIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 148 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 254
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDR 573
+ + +A + L C P RPT +E++E + ++ N ++DR
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 111 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEY 168
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 224
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 225 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 283
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 284 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 334
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 335 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK + K Q++ + R++ +K HPNI+ L T + LV +Y S G +
Sbjct: 36 AVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 95
Query: 386 LLEAYIEGK-RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
L A+ K ++ K R I + + +Q K I H +LK N+LL+ + +
Sbjct: 96 YLVAHGWMKEKEARAKFR-----QIVSAVQYCHQ-----KFIVHRDLKAENLLLDADMNI 145
Query: 445 LISECGYS-KFLDPKKTCLF-SSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S +F K F S Y APE K + DV+S GVIL L++G
Sbjct: 146 KIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 52 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEY 109
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 110 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 165
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 166 I-HRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 224
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 225 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 275
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 276 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 329 AVKRLKKLQV---SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
A+K + K Q+ S+ + + +R + L HPNI+ L T + L+ +Y S G +
Sbjct: 41 AIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD 100
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L A+ K K S I + + +QK I H +LK N+LL+ + +
Sbjct: 101 YLVAHGRMKE----KEARSKFRQIVSAVQYCHQKR-----IVHRDLKAENLLLDADMNIK 151
Query: 446 ISECGYS-KFLDPKKTCLF-SSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S +F K F S Y APE K + DV+S GVIL L++G
Sbjct: 152 IADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEY 122
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 178
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 179 I-HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 288
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIIHLLGACTQDGPLYVIVEY 122
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 178
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 179 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 288
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW----- 399
+ M+ IG KH NI+ L+ + + ++ +Y S G+L L+A ++ +
Sbjct: 85 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 400 -------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS 452
K +S A +A+G++++ K K I H +L N+L+ E+ I++ G +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASK----KCI-HRDLAARNVLVTEDNVMKIADFGLA 197
Query: 453 KFLDPKKTCLFSSNG-----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + ++NG + APE + + Q DV+SFGV+L E+ T G+
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 504 LPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ + K +++E G DK L + C P RPT +++E ++
Sbjct: 258 VEELFK-LLKE---GHRMDKPSNCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
Query: 564 VV 565
+V
Sbjct: 309 IV 310
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 54 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEY 111
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 112 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 167
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 168 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 226
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 227 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 277
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 278 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEY 122
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 178
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 179 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 288
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 51/280 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 60 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 117
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ F+ K H +L N +L+E
Sbjct: 118 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-----ASKKFVHRDLAARNCMLDEK 167
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + DV+SFGV+L E
Sbjct: 168 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 227
Query: 491 LLTGKT---VEKTGIDLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 228 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 272
Query: 545 SNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSME 584
+ RP+ +E++ RI + + H N+++ +++
Sbjct: 273 HPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVNVK 312
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 57 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEY 114
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 115 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 170
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 171 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 229
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 230 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 280
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 281 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 51/280 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 62 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 119
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ F+ K H +L N +L+E
Sbjct: 120 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-----ASKKFVHRDLAARNCMLDEK 169
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + DV+SFGV+L E
Sbjct: 170 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 230 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 274
Query: 545 SNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSME 584
+ RP+ +E++ RI + + H N+++ +++
Sbjct: 275 HPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVNVK 314
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 51/280 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 62 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 119
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ F+ K H +L N +L+E
Sbjct: 120 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-----ASKKFVHRDLAARNCMLDEK 169
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + DV+SFGV+L E
Sbjct: 170 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
Query: 491 LLTGKT---VEKTGIDLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 230 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 274
Query: 545 SNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSME 584
+ RP+ +E++ RI + + H N+++ +++
Sbjct: 275 HPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVNVK 314
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 42/269 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEY 122
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 178
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 179 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYT 237
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 288
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVV 565
+ C P RPT +++E ++ ++
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEY 122
Query: 378 QSNGSLLSLLEAY----IEGKRD--------FPWKLRLSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A +E D +K +S +A+G++++ +K
Sbjct: 123 ASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 178
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 179 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 288
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 282 RRSELVFFVNEKERFK--LDDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVS 339
+R L F+ +K++ DD E ++L + +F V K S + ++L L++
Sbjct: 5 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIK 63
Query: 340 MDEFSQTMRQIGNLKH---PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRD 396
+Q +R++ L P I+ ++ E + ++ GSL +L+ G+
Sbjct: 64 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR-- 119
Query: 397 FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFL 455
P ++ ++ + KGL ++ E+ I H ++K SNIL+N + + + G S + +
Sbjct: 120 IPEQILGKVSIAVIKGLTYL----REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 175
Query: 456 DPKKTCLFSSNGYTAPEKT----VSEQGDVFSFGVILLELLTGK 495
D + Y +PE+ S Q D++S G+ L+E+ G+
Sbjct: 176 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 51/280 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 67 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 124
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ F+ K H +L N +L+E
Sbjct: 125 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-----ASKKFVHRDLAARNCMLDEK 174
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + DV+SFGV+L E
Sbjct: 175 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 234
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 235 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 279
Query: 545 SNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSME 584
+ RP+ +E++ RI + + H N+++ +++
Sbjct: 280 HPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVNVK 319
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 30/254 (11%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 49 NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR 108
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G++ L+ + F + + T +A L + + K + H +
Sbjct: 109 VYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSKR-----VIHRD 159
Query: 431 LKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++ L + Y PE + E+ D++S G
Sbjct: 160 IKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVS 545
V+ E L GK + + K + R E+T F E A+ ++ + +
Sbjct: 220 VLCYEFLVGKPPFEANT-YQETYKRISRVEFTFPDFVTEGAR----------DLISRLLK 268
Query: 546 NSPDDRPTMAEVLE 559
++P RP + EVLE
Sbjct: 269 HNPSQRPMLREVLE 282
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 65/295 (22%)
Query: 302 LEATADLRSQTICSSLF--MVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLK---HP 356
+EA+ + S I S F + + K AVK LK + + ++F ++ L+ H
Sbjct: 33 IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHV 92
Query: 357 NILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFM 416
NIL + Y T + +V ++ SL L + F + IA A+G+D++
Sbjct: 93 NILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYL 148
Query: 417 YQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS----------KFLDPKKTCLFSSN 466
+ K+ I H ++K +NI L+E I + G + + P + L
Sbjct: 149 HAKN-----IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL---- 199
Query: 467 GYTAPE-------KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE S Q DV+S+G++L EL+TG +LP + +
Sbjct: 200 -WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG--------ELP---YSHINNR---- 243
Query: 520 VFDKEVAKAGRQWAFPLLNVALK------------CVSNSPDDRPTMAEVLERIE 562
D+ + GR +A P L+ K CV ++RP ++L IE
Sbjct: 244 --DQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R + S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 26 GNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 85
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 86 RVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYCHSKR-----VIHR 136
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL N + I++ G+S ++T L + Y PE + E+ D++S
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196
Query: 485 GVILLELLTG------KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L G T ++T + + R E+T F E A+ +
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQET-------YRRISRVEFTFPDFVTEGAR----------D 239
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++ R T+AEVLE
Sbjct: 240 LISRLLKHNASQRLTLAEVLE 260
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 44 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 103
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 104 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 154
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSD 214
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 215 LWALGCIIYQLVAG 228
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 51/280 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 63 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 120
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ F+ K H +L N +L+E
Sbjct: 121 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-----ASKKFVHRDLAARNCMLDEK 170
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + DV+SFGV+L E
Sbjct: 171 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 230
Query: 491 LLTGKT---VEKTGIDLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 231 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 275
Query: 545 SNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSME 584
+ RP+ +E++ RI + + H N+++ +++
Sbjct: 276 HPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVNVK 315
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 21/177 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AV+ + K Q++ + R++ +K HPNI+ L T + LV +Y S G +
Sbjct: 43 AVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 386 LLEAYIEGK-RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
L A+ K ++ K R I + + +Q K I H +LK N+LL+ + +
Sbjct: 103 YLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ-----KFIVHRDLKAENLLLDADMNI 152
Query: 445 LISECGYS-KFLDPKKTCLF-SSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S +F K F S Y APE K + DV+S GVIL L++G
Sbjct: 153 KIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ +Y
Sbjct: 65 KEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEY 122
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 178
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 179 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 288
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVAY 122
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 178
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 179 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 288
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 51/280 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 121 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 178
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ F+ K H +L N +L+E
Sbjct: 179 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-----ASKKFVHRDLAARNCMLDEK 228
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + DV+SFGV+L E
Sbjct: 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 288
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 289 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 333
Query: 545 SNSPDDRPTMAEVLERIEEVVNGNDERDRDHSNSSFSSME 584
+ RP+ +E++ RI + + H N+++ +++
Sbjct: 334 HPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVNVK 373
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPLV--CYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRD 396
S + M IG+L H +I+ L+ C S+ + LV +Y GSLL + + +
Sbjct: 58 SFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ---LVTQYLPLGSLLDHVRQH---RGA 111
Query: 397 FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLD 456
+L L+ IAKG+ ++ EE + H NL N+LL +++ G + L
Sbjct: 112 LGPQLLLNWGVQIAKGMYYL-----EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166
Query: 457 PKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLELLTGKTVEKTGIDL 504
P L S T P K + + Q DV+S+GV + EL+T G+ L
Sbjct: 167 PDDKQLLYSEAKT-PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 223
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 329 AVKRLKKLQV---SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
A+K + K Q+ S+ + + +R + L HPNI+ L T + L+ +Y S G +
Sbjct: 44 AIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD 103
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L A+ K K S I + + +QK I H +LK N+LL+ + +
Sbjct: 104 YLVAHGRMKE----KEARSKFRQIVSAVQYCHQKR-----IVHRDLKAENLLLDADMNIK 154
Query: 446 ISECGYSK--FLDPKKTCLFSSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG 494
I++ G+S + K + Y APE K + DV+S GVIL L++G
Sbjct: 155 IADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 22/174 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG- 467
+AKG++F+ + K I H +L NILL+E I + G ++ + + +
Sbjct: 148 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 468 ----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 254
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDR 573
+ + +A + L C P RPT +E++E + ++ N ++DR
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 47 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 106
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 107 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 157
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD 217
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 218 LWALGCIIYQLVAG 231
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 42/270 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMD-----EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
K + AVK LK D + M+ IG KH NI+ L+ + + ++ Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVGY 122
Query: 378 QSNGSLLSLLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKT 425
S G+L L A ++ + + +S +A+G++++ +K
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL----ASQKC 178
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPE----KTVS 476
I H +L N+L+ EN I++ G ++ ++ ++NG + APE + +
Sbjct: 179 I-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 477 EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPL 536
Q DV+SFGV++ E+ T GI + + K +++E G DK L
Sbjct: 238 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKE---GHRMDKPANCTNE-----L 288
Query: 537 LNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ C P RPT +++E ++ ++
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 22/174 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG- 467
+AKG++F+ + K I H +L NILL+E I + G ++ + + +
Sbjct: 148 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 468 ----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 254
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDR 573
+ + +A + L C P RPT +E++E + ++ N ++DR
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 39/264 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKL-LVYKYQSNGSLLSLL 387
A+K LK +S + F + + + LKH ++ L Y +EE + +V +Y + GSLL L
Sbjct: 37 AIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFL 94
Query: 388 EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLIS 447
+ EG R + +A +A G+ ++ E H +L+ +NIL+ I+
Sbjct: 95 KDG-EG-RALKLPNLVDMAAQVAAGMAYI-----ERMNYIHRDLRSANILVGNGLICKIA 147
Query: 448 ECGYSKFLDPKKTCLFSSNGY----TAPEKTV----SEQGDVFSFGVILLELLTGKTVEK 499
+ G ++ ++ + + TAPE + + + DV+SFG++L EL+T V
Sbjct: 148 DFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPY 207
Query: 500 TGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSPDDRPT 553
G++ EV ++ + G + P L + + C P++RPT
Sbjct: 208 PGMN-------------NREVLEQ--VERGYRMPCPQDCPISLHELMIHCWKKDPEERPT 252
Query: 554 MAEVLERIEEVVNGNDERDRDHSN 577
+ +E+ + + + N
Sbjct: 253 FEYLQSFLEDYFTATEPQYQPGEN 276
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 106 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 156
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPLV--CYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRD 396
S + M IG+L H +I+ L+ C S+ + LV +Y GSLL + + +
Sbjct: 76 SFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ---LVTQYLPLGSLLDHVRQH---RGA 129
Query: 397 FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLD 456
+L L+ IAKG+ ++ EE + H NL N+LL +++ G + L
Sbjct: 130 LGPQLLLNWGVQIAKGMYYL-----EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 184
Query: 457 PKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLELLTGKTVEKTGIDL 504
P L S T P K + + Q DV+S+GV + EL+T G+ L
Sbjct: 185 PDDKQLLYSEAKT-PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 241
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 44 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 103
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 104 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 154
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 215 LWALGCIIYQLVAG 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 22/200 (11%)
Query: 308 LRSQTICSSLFMVRLKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVC 363
L + +++ L S YA+K L+K + + ++ + L HP + L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 364 YNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEE 423
+E+ Y NG LL YI F I L++++ K
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 150
Query: 424 KTIPHGNLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKT 474
I H +LK NILLNE+ I++ G +K L P + + Y +P EK+
Sbjct: 151 --IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 475 VSEQGDVFSFGVILLELLTG 494
+ D+++ G I+ +L+ G
Sbjct: 209 ACKSSDLWALGCIIYQLVAG 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 16/184 (8%)
Query: 320 VRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKH---PNILPLVCYNSTNEEKLLVYK 376
V+ + S + ++L L++ +Q +R++ L P I+ ++ E + +
Sbjct: 35 VQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 94
Query: 377 YQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNI 436
+ GSL +L+ E KR P ++ ++ + +GL ++ +K I H ++K SNI
Sbjct: 95 HMDGGSLDQVLK---EAKR-IPEEILGKVSIAVLRGLAYLREKHQ----IMHRDVKPSNI 146
Query: 437 LLNENEDPLISECGYS-KFLDPKKTCLFSSNGYTAPEKT----VSEQGDVFSFGVILLEL 491
L+N + + + G S + +D + Y APE+ S Q D++S G+ L+EL
Sbjct: 147 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVEL 206
Query: 492 LTGK 495
G+
Sbjct: 207 AVGR 210
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 106 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 156
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSD 216
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 28 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 87
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 88 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 138
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 139 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 198
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 199 LWALGCIIYQLVAG 212
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 44 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 103
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 104 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 154
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 215 LWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 106 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 156
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 328 YAVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
YAVK + K + S +R++ LK HPNI+ L + +V + + G L
Sbjct: 50 YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE-- 442
+ I+ KR F I + G+ +M++ + I H +LK NILL E
Sbjct: 110 ---DEIIKRKR-FSEHDAARIIKQVFSGITYMHKHN-----IVHRDLKPENILLESKEKD 160
Query: 443 -DPLISECGYSKFL--DPKKTCLFSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG-- 494
D I + G S + K + Y APE T E+ DV+S GVIL LL+G
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTP 220
Query: 495 -----------KTVE--KTGIDLPKW 507
K VE K DLP+W
Sbjct: 221 PFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 23 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 82
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 83 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 133
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 134 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 193
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 194 LWALGCIIYQLVAG 207
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 49 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 108
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 109 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 159
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 160 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 219
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 220 LWALGCIIYQLVAG 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 47 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 106
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 107 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 157
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 217
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 218 LWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 106 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 156
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 106 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 156
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV-SMDEFSQTMRQ---IGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + ++ R+ + L HP + L +E
Sbjct: 43 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 102
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 103 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 153
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD 213
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 214 LWALGCIIYQLVAG 227
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 51 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDE 110
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 111 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 161
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 221
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 222 LWALGCIIYQLVAG 235
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 24 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 83
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 84 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 134
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 135 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 194
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 195 LWALGCIIYQLVAG 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 21 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 80
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 81 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 131
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 132 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 191
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 192 LWALGCIIYQLVAG 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 328 YAVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
YAVK + K + S +R++ LK HPNI+ L + +V + + G L
Sbjct: 50 YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE-- 442
+ I+ KR F I + G+ +M++ + I H +LK NILL E
Sbjct: 110 ---DEIIKRKR-FSEHDAARIIKQVFSGITYMHKHN-----IVHRDLKPENILLESKEKD 160
Query: 443 -DPLISECGYSKFL--DPKKTCLFSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG-- 494
D I + G S + K + Y APE T E+ DV+S GVIL LL+G
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTP 220
Query: 495 -----------KTVE--KTGIDLPKW 507
K VE K DLP+W
Sbjct: 221 PFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV----SMDEFSQTMRQIGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + + ++ + L HP + L +E
Sbjct: 22 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 81
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 82 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 132
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 133 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 192
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 193 LWALGCIIYQLVAG 206
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 328 YAVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
YAVK + K + S +R++ LK HPNI+ L + +V + + G L
Sbjct: 50 YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE-- 442
+ I+ KR F I + G+ +M++ + I H +LK NILL E
Sbjct: 110 ---DEIIKRKR-FSEHDAARIIKQVFSGITYMHKHN-----IVHRDLKPENILLESKEKD 160
Query: 443 -DPLISECGYSKFL--DPKKTCLFSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG-- 494
D I + G S + K + Y APE T E+ DV+S GVIL LL+G
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTP 220
Query: 495 -----------KTVE--KTGIDLPKW 507
K VE K DLP+W
Sbjct: 221 PFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 315 SSLFMVR-LKNSAVYAVKRLKKLQV-SMDEFSQTMRQ---IGNLKHPNILPLVCYNSTNE 369
S++ + R L S YA+K L+K + ++ R+ + L HP + L +E
Sbjct: 43 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 102
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
+ Y NG LL YI F I L++++ K I H
Sbjct: 103 KLYFGLSYAKNGELLK----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG-----IIHR 153
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP-----KKTCLFSSNGYTAP----EKTVSEQGD 480
+LK NILLNE+ I++ G +K L P + + Y +P EK+ + D
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 213
Query: 481 VFSFGVILLELLTG 494
+++ G I+ +L+ G
Sbjct: 214 LWALGCIIYQLVAG 227
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 43/251 (17%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLL----EAYIEGKRDFPWK 400
+ M +G +H NI+ L+ + L++ +Y G LL+ L EA ++ + P +
Sbjct: 101 KIMSHLG--QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 401 LR--LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPK 458
LR L ++ +A+G+ F+ K H ++ N+LL I + G ++ +
Sbjct: 159 LRDLLHFSSQVAQGMAFL-----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
Query: 459 KTCLFSSNG-----YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVK 509
+ N + APE + Q DV+S+G++L E+ + + L +
Sbjct: 214 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS--------LGLNPYPG 265
Query: 510 AMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSPDDRPTMAEVLERIEE 563
+V ++ ++ K G Q A P + ++ C + P RPT ++ ++E
Sbjct: 266 ILVNSKFY------KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 319
Query: 564 VVNGNDERDRD 574
D R+RD
Sbjct: 320 QAQ-EDRRERD 329
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 140 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWY 194
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 253
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 254 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 314 FAQYHDPDDEPVADPYDQSFES 335
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 136 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWY 190
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 249
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 310 FAQYHDPDDEPVADPYDQSFES 331
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 139 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 252
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 313 FAQYHDPDDEPVADPYDQSFES 334
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 299 DDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKH--- 355
DD E ++L + +F V K S + ++L L++ +Q +R++ L
Sbjct: 5 DDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDF 415
P I+ ++ E + ++ GSL +L+ G+ P ++ ++ + KGL +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR--IPEQILGKVSIAVIKGLTY 119
Query: 416 MYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFLDPKKTCLFSSNGYTAPEKT 474
+ E+ I H ++K SNIL+N + + + G S + +D + Y +PE+
Sbjct: 120 L----REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 475 ----VSEQGDVFSFGVILLELLTGK 495
S Q D++S G+ L+E+ G+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 139 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 252
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 313 FAQYHDPDDEPVADPYDQSFES 334
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D ++ SF S
Sbjct: 308 FAQYHDPDDEPVADPTDQSFES 329
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 68/288 (23%)
Query: 322 LKNSAVY---AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVY 375
LK A Y AVK LK+ S E + + LK HP+++ L S + LL+
Sbjct: 47 LKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105
Query: 376 KYQSNGSLLSLLEAYIEGKRDFPWKLR-----------------------LSIATGIAKG 412
+Y GSL L E ++ P L +S A I++G
Sbjct: 106 EYAKYGSLRGFLR---ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQG 162
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG----- 467
+ ++ E ++ H +L NIL+ E IS+ G S+ + + + + S G
Sbjct: 163 MQYL-----AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK 217
Query: 468 YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDK 523
+ A E + Q DV+SFGV+L E++T GI + +F+
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-------------LFN- 263
Query: 524 EVAKAGRQWAFP------LLNVALKCVSNSPDDRPTMAEVLERIEEVV 565
+ K G + P + + L+C PD RP A++ + +E+++
Sbjct: 264 -LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 145 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 199
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 258
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 259 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 318
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 319 FAQYHDPDDEPVADPYDQSFES 340
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 299 DDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKH--- 355
DD E ++L + +F V K S + ++L L++ +Q +R++ L
Sbjct: 5 DDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDF 415
P I+ ++ E + ++ GSL +L+ G+ P ++ ++ + KGL +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR--IPEQILGKVSIAVIKGLTY 119
Query: 416 MYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFLDPKKTCLFSSNGYTAPEKT 474
+ E+ I H ++K SNIL+N + + + G S + +D + Y +PE+
Sbjct: 120 L----REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 475 ----VSEQGDVFSFGVILLELLTGK 495
S Q D++S G+ L+E+ G+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 31/195 (15%)
Query: 323 KNSAVYAVKRLKKLQVSM-DEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNG 381
K+ + AVK LK ++ +F + + NL+H +I+ + ++V++Y +G
Sbjct: 43 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 382 SLLSLLEAY-------IEGK-RDFPWKLRLS----IATGIAKGLDFMYQKSNEEKTIPHG 429
L L A+ ++G+ R +L LS IA+ IA G+ ++ + H
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL-----ASQHFVHR 157
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTA-------PE----KTVSEQ 478
+L N L+ N I + G S+ D T + G+T PE + + +
Sbjct: 158 DLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE 215
Query: 479 GDVFSFGVILLELLT 493
DV+SFGVIL E+ T
Sbjct: 216 SDVWSFGVILWEIFT 230
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 157 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 263
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
+ + +A + L C P RPT +E++E + ++ N ++D
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 159 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 265
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
+ + +A + L C P RPT +E++E + ++ N ++D
Sbjct: 266 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 318
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 157 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 263
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
+ + +A + L C P RPT +E++E + ++ N ++D
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 61 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 118
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 119 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 168
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + DV+SFGV+L E
Sbjct: 169 FTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 228
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 229 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 273
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 274 HPKAEMRPSFSELVSRISAI 293
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 299 DDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKH--- 355
DD E ++L + +F V K S + ++L L++ +Q +R++ L
Sbjct: 5 DDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDF 415
P I+ ++ E + ++ GSL +L+ G+ P ++ ++ + KGL +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR--IPEQILGKVSIAVIKGLTY 119
Query: 416 MYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFLDPKKTCLFSSNGYTAPEKT 474
+ E+ I H ++K SNIL+N + + + G S + +D + Y +PE+
Sbjct: 120 L----REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 475 ----VSEQGDVFSFGVILLELLTGK 495
S Q D++S G+ L+E+ G+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 299 DDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKH--- 355
DD E ++L + +F V K S + ++L L++ +Q +R++ L
Sbjct: 5 DDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDF 415
P I+ ++ E + ++ GSL +L+ G+ P ++ ++ + KGL +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR--IPEQILGKVSIAVIKGLTY 119
Query: 416 MYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFLDPKKTCLFSSNGYTAPEKT 474
+ E+ I H ++K SNIL+N + + + G S + +D + Y +PE+
Sbjct: 120 L----REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 475 ----VSEQGDVFSFGVILLELLTGK 495
S Q D++S G+ L+E+ G+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 299 DDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKH--- 355
DD E ++L + +F V K S + ++L L++ +Q +R++ L
Sbjct: 5 DDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDF 415
P I+ ++ E + ++ GSL +L+ G+ P ++ ++ + KGL +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR--IPEQILGKVSIAVIKGLTY 119
Query: 416 MYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFLDPKKTCLFSSNGYTAPEKT 474
+ E+ I H ++K SNIL+N + + + G S + +D + Y +PE+
Sbjct: 120 L----REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL 175
Query: 475 ----VSEQGDVFSFGVILLELLTGK 495
S Q D++S G+ L+E+ G+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 194 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 300
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
+ + +A + L C P RPT +E++E + ++ N ++D
Sbjct: 301 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 353
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNE 369
++++ R + S + A+K L K Q+ +R+ +L+HPNIL L Y
Sbjct: 26 GNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 85
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L+ +Y G++ L+ F + + T +A L + + K + H
Sbjct: 86 RVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSYCHSKR-----VIHR 136
Query: 430 NLKLSNILLNENEDPLISECGYSKFL-DPKKTCLFSSNGYTAPE----KTVSEQGDVFSF 484
++K N+LL N + I++ G+S ++ L + Y PE + E+ D++S
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196
Query: 485 GVILLELLTG------KTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLN 538
GV+ E L G T ++T + + R E+T F E A+ +
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQET-------YRRISRVEFTFPDFVTEGAR----------D 239
Query: 539 VALKCVSNSPDDRPTMAEVLE 559
+ + + ++ R T+AEVLE
Sbjct: 240 LISRLLKHNASQRLTLAEVLE 260
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPQDQSFES 329
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 140 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 253
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 254 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 314 FAQYHDPDDEPVADPYDQSFES 335
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 59 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 116
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 117 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 166
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + + DV+SFGV+L E
Sbjct: 167 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 226
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 227 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 271
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 272 HPKAEMRPSFSELVSRISAI 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 61 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 118
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 119 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 168
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + + DV+SFGV+L E
Sbjct: 169 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 228
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 229 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 273
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 274 HPKAEMRPSFSELVSRISAI 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 62 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 119
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 120 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 169
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + + DV+SFGV+L E
Sbjct: 170 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 230 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 274
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 275 HPKAEMRPSFSELVSRISAI 294
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 207 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 313
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
+ + +A + L C P RPT +E++E + ++ N ++D
Sbjct: 314 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 366
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 140 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 253
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 254 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 314 FAQYHDPDDEPVADPYDQSFES 335
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 130 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 243
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 244 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 304 FAQYHDPDDEPVADPYDQSFES 325
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 60 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS-PLVVLPYMKHGDL 117
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 118 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 167
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + + DV+SFGV+L E
Sbjct: 168 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 227
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 228 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 272
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 273 HPKAEMRPSFSELVSRISAI 292
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 209 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 315
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
+ + +A + L C P RPT +E++E + ++ N ++D
Sbjct: 316 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 368
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 54 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 111
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 112 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 161
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + + DV+SFGV+L E
Sbjct: 162 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 221
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 222 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 266
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 267 HPKAEMRPSFSELVSRISAI 286
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 117/288 (40%), Gaps = 68/288 (23%)
Query: 322 LKNSAVY---AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVY 375
LK A Y AVK LK+ S E + + LK HP+++ L S + LL+
Sbjct: 47 LKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105
Query: 376 KYQSNGSLLSLLEAYIEGKRDFPWKLR-----------------------LSIATGIAKG 412
+Y GSL L E ++ P L +S A I++G
Sbjct: 106 EYAKYGSLRGFLR---ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQG 162
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG----- 467
+ ++ E + H +L NIL+ E IS+ G S+ + + + + S G
Sbjct: 163 MQYL-----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVK 217
Query: 468 YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDK 523
+ A E + Q DV+SFGV+L E++T GI + +F+
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-------------LFN- 263
Query: 524 EVAKAGRQWAFP------LLNVALKCVSNSPDDRPTMAEVLERIEEVV 565
+ K G + P + + L+C PD RP A++ + +E+++
Sbjct: 264 -LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 62 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 119
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 120 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 169
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + DV+SFGV+L E
Sbjct: 170 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 230 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 274
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 275 HPKAEMRPSFSELVSRISAI 294
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 132 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 186
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 245
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 246 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 305
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 306 FAQYHDPDDEPVADPYDQSFES 327
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 154 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 208
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 267
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 268 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 328 FAQYHDPDDEPVADPYDQSFES 349
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 57 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 114
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 115 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 164
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + + DV+SFGV+L E
Sbjct: 165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 224
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 225 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 269
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 270 HPKAEMRPSFSELVSRISAI 289
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 81 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 138
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 139 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 188
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + + DV+SFGV+L E
Sbjct: 189 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 248
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 249 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 293
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 294 HPKAEMRPSFSELVSRISAI 313
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 157 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 211
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 270
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 271 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 330
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 331 FAQYHDPDDEPVADPYDQSFES 352
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPRDQSFES 329
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 117/288 (40%), Gaps = 68/288 (23%)
Query: 322 LKNSAVY---AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVY 375
LK A Y AVK LK+ S E + + LK HP+++ L S + LL+
Sbjct: 47 LKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105
Query: 376 KYQSNGSLLSLLEAYIEGKRDFPWKLR-----------------------LSIATGIAKG 412
+Y GSL L E ++ P L +S A I++G
Sbjct: 106 EYAKYGSLRGFLR---ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQG 162
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG----- 467
+ ++ E + H +L NIL+ E IS+ G S+ + + + + S G
Sbjct: 163 MQYL-----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK 217
Query: 468 YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDK 523
+ A E + Q DV+SFGV+L E++T GI + +F+
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-------------LFN- 263
Query: 524 EVAKAGRQWAFP------LLNVALKCVSNSPDDRPTMAEVLERIEEVV 565
+ K G + P + + L+C PD RP A++ + +E+++
Sbjct: 264 -LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 154 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 208
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 267
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 268 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 328 FAQYHDPDDEPVADPYDQSFES 349
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 144 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 198
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 257
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 258 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 317
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 318 FAQYHDPDDEPVADPYDQSFES 339
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 139 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 193
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 252
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 313 FAQYHDPDDEPVADPYDQSFES 334
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 117/279 (41%), Gaps = 35/279 (12%)
Query: 287 VFFVNEKERFKLDDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQ-VSMDEFSQ 345
VF NE F ++L A +C + + +YA+K + K + V +E
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVC---IVQKNDTKKMYAMKYMNKQKCVERNEVRN 61
Query: 346 TMRQIG---NLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLR 402
+++ L+HP ++ L E+ +V G L L+ + K + ++
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE---TVK 118
Query: 403 LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL 462
L I + LD++ + + I H ++K NILL+E+ I++ + L P++T +
Sbjct: 119 LFICE-LVMALDYL-----QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQI 171
Query: 463 FSSNG---YTAPEKTVSEQGDVFSF-------GVILLELLTGKTVEKTGIDLPKWVKAMV 512
+ G Y APE S +G +SF GV ELL G+ P +++
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR--------PYHIRSST 223
Query: 513 REEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDR 551
+ F+ V W+ ++++ K + +PD R
Sbjct: 224 SSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 140 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 253
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 254 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 314 FAQYHDPDDEPVADPYDQSFES 335
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 131 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 185
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 244
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 245 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 305 FAQYHDPDDEPVADPYDQSFES 326
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG- 467
+AKG++F+ + K I H +L NILL+E I + G ++ + + +
Sbjct: 157 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 468 ----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 263
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
+ + +A + L C P RPT +E++E + ++ N ++D
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 153 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 207
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 266
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 267 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 327 FAQYHDPDDEPVADPYDQSFES 348
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 294 ERFKLDDLLE----ATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQ 349
ER+K+ D L +T L TI + +++ A++ R K + ++ F + +
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILN----IKVAIKAIFIPPREK--EETLKRFEREVHN 64
Query: 350 IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGI 409
L H NI+ ++ + ++ LV +Y +L +E++ D I GI
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 410 AKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-- 467
D I H ++K NIL++ N+ I + G +K L +T L +N
Sbjct: 125 KHAHDM---------RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVL 173
Query: 468 ----YTAPEKTVSEQGD----VFSFGVILLELLTGK 495
Y +PE+ E D ++S G++L E+L G+
Sbjct: 174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 130 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 243
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 244 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 304 FAQYHDPDDEPVADPYDQSFES 325
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDE---FSQTMRQIGNL--KHPNILPLVCYNSTN 368
+ + +VRLK + +YA+K +KK V+ DE + QT + + HP ++ L T
Sbjct: 34 AKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 93
Query: 369 EEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
V +Y + G L+ +++ +R P + + I+ L++++ E+ I +
Sbjct: 94 SRLFFVIEYVNGGDLM----FHMQRQRKLPEEHARFYSAEISLALNYLH-----ERGIIY 144
Query: 429 GNLKLSNILLNENEDPLISECGYSK-FLDPKKTC--LFSSNGYTAPEKTVSEQG----DV 481
+LKL N+LL+ +++ G K L P T + Y APE E D
Sbjct: 145 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 204
Query: 482 FSFGVILLELLTGKT 496
++ GV++ E++ G++
Sbjct: 205 WALGVLMFEMMAGRS 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 130 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 243
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 304 FAQYHDPDDEPVADPYDQSFES 325
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG- 467
+AKG++F+ + K I H +L NILL+E I + G ++ + + +
Sbjct: 157 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 468 ----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 263
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
+ + +A + L C P RPT +E++E + ++ N ++D
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 51/260 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSL 383
AVK L ++ + E SQ + + + + HPN+L L +C S L+V Y +G L
Sbjct: 80 AVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDL 137
Query: 384 LSLL--EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
+ + E + +D + +AKG+ ++ K H +L N +L+E
Sbjct: 138 RNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL-----ASKKFVHRDLAARNCMLDEK 187
Query: 442 EDPLISECGYSK-FLDPKKTCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLE 490
+++ G ++ D + + + G P K + + + DV+SFGV+L E
Sbjct: 188 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 247
Query: 491 LLTGKTVEKTGI---DLPKWV---KAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCV 544
L+T + D+ ++ + +++ E+ + PL V LKC
Sbjct: 248 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------------PLYEVMLKCW 292
Query: 545 SNSPDDRPTMAEVLERIEEV 564
+ RP+ +E++ RI +
Sbjct: 293 HPKAEMRPSFSELVSRISAI 312
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 141 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 195
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 254
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 315 FAQYHDPDDEPVADPYDQSFES 336
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 131 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 185
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 244
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 245 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 305 FAQYHDPDDEPVADPYDQSFES 326
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 146 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 259
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 260 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 320 FAQYHDPDDEPVADPYDQSFES 341
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 136 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 249
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 310 FAQYHDPDDEPVADPYDQSFES 331
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 146 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 259
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 260 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 320 FAQYHDPDDEPVADPYDQSFES 341
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 153 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 207
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 266
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 267 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 327 FAQYHDPDDEPVADPYDQSFES 348
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDE---FSQTMRQIGNL--KHPNILPLVCYNSTN 368
+ + +VRLK + +YA+K +KK V+ DE + QT + + HP ++ L T
Sbjct: 19 AKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 78
Query: 369 EEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
V +Y + G L+ +++ +R P + + I+ L++++ E+ I +
Sbjct: 79 SRLFFVIEYVNGGDLM----FHMQRQRKLPEEHARFYSAEISLALNYLH-----ERGIIY 129
Query: 429 GNLKLSNILLNENEDPLISECGYSK-FLDPKKTC--LFSSNGYTAPEKTVSEQG----DV 481
+LKL N+LL+ +++ G K L P T + Y APE E D
Sbjct: 130 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 189
Query: 482 FSFGVILLELLTGKT 496
++ GV++ E++ G++
Sbjct: 190 WALGVLMFEMMAGRS 204
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 145 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 199
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 258
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 259 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 318
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 319 FAQYHDPDDEPVADPYDQSFES 340
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 139 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 193
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 252
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 253 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 313 FAQYHDPDDEPVADPYDQSFES 334
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 136 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 249
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 310 FAQYHDPDDEPVADPYDQSFES 331
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 133 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 187
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 246
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 247 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 306
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 307 FAQYHDPDDEPVADPYDQSFES 328
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 136 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 249
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 250 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 310 FAQYHDPDDEPVADPYDQSFES 331
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG- 467
+AKG++F+ + K I H +L NILL+E I + G ++ + + +
Sbjct: 157 VAKGMEFLASR----KXI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 468 ----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 263
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
+ + +A + L C P RPT +E++E + ++ N ++D
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 146 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 259
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 260 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 320 FAQYHDPDDEPVADPYDQSFES 341
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 299 DDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKH--- 355
DD E ++L + +F V K S + ++L L++ +Q +R++ L
Sbjct: 8 DDDFEKISELGAGN-GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 66
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDF 415
P I+ ++ E + ++ GSL +L+ G+ P ++ ++ + KGL +
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGR--IPEQILGKVSIAVIKGLTY 122
Query: 416 MYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFLDPKKTCLFSSNGYTAPEKT 474
+ E+ I H ++K SNIL+N + + + G S + +D + Y +PE+
Sbjct: 123 L----REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERL 178
Query: 475 ----VSEQGDVFSFGVILLELLTGK 495
S Q D++S G+ L+E+ G+
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDE---FSQTMRQIGNL--KHPNILPLVCYNSTN 368
+ + +VRLK + +YA+K +KK V+ DE + QT + + HP ++ L T
Sbjct: 23 AKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 82
Query: 369 EEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
V +Y + G L+ +++ +R P + + I+ L++++ E+ I +
Sbjct: 83 SRLFFVIEYVNGGDLM----FHMQRQRKLPEEHARFYSAEISLALNYLH-----ERGIIY 133
Query: 429 GNLKLSNILLNENEDPLISECGYSK-FLDPKKTC--LFSSNGYTAPEKTVSEQG----DV 481
+LKL N+LL+ +++ G K L P T + Y APE E D
Sbjct: 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW 193
Query: 482 FSFGVILLELLTGKT 496
++ GV++ E++ G++
Sbjct: 194 WALGVLMFEMMAGRS 208
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPFDQSFES 329
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 49/258 (18%)
Query: 329 AVKRLKKLQVSMD--EFSQTMRQIGNL-KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
A+KR+K+ D +F+ + + L HPNI+ L+ L +Y +G+LL
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 386 LLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKTIPHGNLKL 433
L + D + + L A +A+G+D++ QK H NL
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-----FIHRNLAA 167
Query: 434 SNILLNENEDPLISECGYSKFLD--PKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVI 487
NIL+ EN I++ G S+ + KKT + A E + DV+S+GV+
Sbjct: 168 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 227
Query: 488 LLELLT-------GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVA 540
L E+++ G T + LP+ + EV+D +
Sbjct: 228 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYD----------------LM 271
Query: 541 LKCVSNSPDDRPTMAEVL 558
+C P +RP+ A++L
Sbjct: 272 RQCWREKPYERPSFAQIL 289
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 108/261 (41%), Gaps = 44/261 (16%)
Query: 326 AVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEE-KLLVYKYQSNGSLL 384
A+ ++ R+ ++Q ++ F + + L HPN+L L+ E ++ Y +G LL
Sbjct: 53 AIKSLSRITEMQ-QVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLL 111
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
+ + +R+ K +S +A+G++++ E+ H +L N +L+E+
Sbjct: 112 QFIRS---PQRNPTVKDLISFGLQVARGMEYL-----AEQKFVHRDLAARNCMLDESFTV 163
Query: 445 LISECGYSK-FLDPKKTCLFSSNGYTAPEK----------TVSEQGDVFSFGVILLELLT 493
+++ G ++ LD + + P K + + DV+SFGV+L ELLT
Sbjct: 164 KVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
Query: 494 GKTVEKTGIDLPKWVKAMVREEWTGEVFD-KEVAKAGRQWAFP------LLNVALKCVSN 546
ID FD GR+ P L V +C
Sbjct: 224 RGAPPYRHID----------------PFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEA 267
Query: 547 SPDDRPTMAEVLERIEEVVNG 567
P RPT ++ +E++V+
Sbjct: 268 DPAVRPTFRVLVGEVEQIVSA 288
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 265 SKSPPQVMDIEEVRPEVRRSELVFFVNE-KERFKLDDLLEATADLRSQTICSSLFMVRLK 323
S + P M +E RP R EL + E ER++ L ++CSS +K
Sbjct: 22 SAAAPFTMSHKE-RPTFYRQELNKTIWEVPERYQT---LSPVGSGAYGSVCSS---YDVK 74
Query: 324 NSAVYAVKRLKKLQVSMDEFSQTMRQI---GNLKHPNIL-------PLVCYNSTNEEKLL 373
+ AVK+L + S+ +T R++ ++KH N++ P N+ L+
Sbjct: 75 SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLV 134
Query: 374 VYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKL 433
+ ++ + + + + F + I +GL +++ I H +LK
Sbjct: 135 THLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIHSAD-----IIHRDLKP 182
Query: 434 SNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPEKTVSEQG-----DVFSFGVIL 488
SN+ +NE+ + I + G ++ D + T ++ Y APE ++ D++S G I+
Sbjct: 183 SNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIM 242
Query: 489 LELLTGKTV 497
ELLTG+T+
Sbjct: 243 AELLTGRTL 251
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G + D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP 548
K +++ R + P +N A + +P
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANP 279
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 342 EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKL 401
+F Q R + HPNI+ L+ + + +V + G L+ L EG R K
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGAR-LRVKT 214
Query: 402 RLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTC 461
L + A G++++ E K H +L N L+ E IS+ G S+ +
Sbjct: 215 LLQMVGDAAAGMEYL-----ESKCCIHRDLAARNCLVTEKNVLKISDFGMSR---EEADG 266
Query: 462 LFSSNG--------YTAPEKT----VSEQGDVFSFGVILLELLT 493
+++++G +TAPE S + DV+SFG++L E +
Sbjct: 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 110/282 (39%), Gaps = 64/282 (22%)
Query: 329 AVKRLKKLQVSMD---EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK LK+ + S D +F + + +PNI+ L+ + + L+++Y + G L
Sbjct: 81 AVKMLKE-EASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 386 LLEAYIE------GKRDFPWKLRLS--------------IATGIAKGLDFMYQKSNEEKT 425
L + D + R+S IA +A G+ ++ E+
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL-----SERK 194
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTA-----------PEKT 474
H +L N L+ EN I++ G S+ ++S++ Y A P ++
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLSRN-------IYSADYYKADGNDAIPIRWMPPES 247
Query: 475 V-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAG 529
+ + + DV+++GV+L E+ + G M EE V D +
Sbjct: 248 IFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG---------MAHEEVIYYVRDGNILACP 298
Query: 530 RQWAFPLLNVALKCVSNSPDDRPTMA---EVLERIEEVVNGN 568
L N+ C S P DRP+ +L+R+ E G
Sbjct: 299 ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT 340
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 43/255 (16%)
Query: 324 NSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPL-VCYNSTNEEKLLVYKYQSNGS 382
+ Y +KR+K + ++ + ++ + L H NI+ C++ + + K S
Sbjct: 35 DGKTYVIKRVK---YNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91
Query: 383 LLSL-----------LEAYIEGKR--DFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHG 429
L LE +IE +R L L + I KG+D+++ K + +
Sbjct: 92 TKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-----LINR 146
Query: 430 NLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNGYTAPEKTVSE----QGDVFS 483
+LK SNI L + + I + G L D K+ + Y +PE+ S+ + D+++
Sbjct: 147 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYA 206
Query: 484 FGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKC 543
G+IL ELL V T + K+ + R+ ++FDK+ + K
Sbjct: 207 LGLILAELLH---VCDTAFETSKFFTDL-RDGIISDIFDKKEK-----------TLLQKL 251
Query: 544 VSNSPDDRPTMAEVL 558
+S P+DRP +E+L
Sbjct: 252 LSKKPEDRPNTSEIL 266
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + ++ Y
Sbjct: 130 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWY 184
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 243
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 244 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 304 FAQYHDPDDEPVADPYDQSFES 325
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMDE---FSQTMRQIGNL--KHPNILPLVCYNSTN 368
+ + +VRLK + +YA++ +KK V+ DE + QT + + HP ++ L T
Sbjct: 66 AKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 125
Query: 369 EEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
V +Y + G L+ +++ +R P + + I+ L++++ E+ I +
Sbjct: 126 SRLFFVIEYVNGGDLM----FHMQRQRKLPEEHARFYSAEISLALNYLH-----ERGIIY 176
Query: 429 GNLKLSNILLNENEDPLISECGYSK-FLDPKKT--CLFSSNGYTAPEKTVSEQG----DV 481
+LKL N+LL+ +++ G K L P T + Y APE E D
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 236
Query: 482 FSFGVILLELLTGKT 496
++ GV++ E++ G++
Sbjct: 237 WALGVLMFEMMAGRS 251
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 153 VAKGMEFLASR----KXI-HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFXRR 259
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGN 568
+ + +A + L C P RPT +E++E + ++ N
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 315 SSLFMVRLKNSA-VYAVKRLKKLQVSMD---EFSQTMRQIGNL--KHPNILPLVCYNSTN 368
+ + R+K + +YAVK LKK + D E + T ++I +L HP + L C T
Sbjct: 37 GKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP 96
Query: 369 EEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPH 428
+ V ++ + G L+ +I+ R F A I L F++ +K I +
Sbjct: 97 DRLFFVMEFVNGGDLM----FHIQKSRRFDEARARFYAAEIISALMFLH-----DKGIIY 147
Query: 429 GNLKLSNILLNENEDPLISECGYSK--FLDPKKTCLF-SSNGYTAP----EKTVSEQGDV 481
+LKL N+LL+ +++ G K + T F + Y AP E D
Sbjct: 148 RDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDW 207
Query: 482 FSFGVILLELLTG 494
++ GV+L E+L G
Sbjct: 208 WAMGVLLYEMLCG 220
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 21/163 (12%)
Query: 342 EFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKL 401
+F Q R + HPNI+ L+ + + +V + G L+ L EG R K
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGAR-LRVKT 214
Query: 402 RLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTC 461
L + A G++++ E K H +L N L+ E IS+ G S+ +
Sbjct: 215 LLQMVGDAAAGMEYL-----ESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGV 267
Query: 462 LFSSNG-------YTAPEKT----VSEQGDVFSFGVILLELLT 493
+S G +TAPE S + DV+SFG++L E +
Sbjct: 268 XAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 319 MVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPLVCYNSTNEEKLLVY 375
+ R + +YA+K LKK + + + +T + + ++ HP ++ L T + L+
Sbjct: 50 VTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLIL 109
Query: 376 KYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSN 435
+ G L + L + + ++ +A +A GLD ++ I + +LK N
Sbjct: 110 DFLRGGDLFTRLSKEVMFTEE---DVKFYLAE-LALGLDHLHSLG-----IIYRDLKPEN 160
Query: 436 ILLNENEDPLISECGYSKFLDPKKTCLFSSNG---YTAPEKTVSEQG-----DVFSFGVI 487
ILL+E +++ G SK + +S G Y APE V+ QG D +S+GV+
Sbjct: 161 ILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE-VVNRQGHSHSADWWSYGVL 219
Query: 488 LLELLTG 494
+ E+LTG
Sbjct: 220 MFEMLTG 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I G ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 342 EFSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW 399
EF + ++ HP+++ L VC + T + LV + +G LL + E K +
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ---LVTQLMPHGCLLEYVH---EHKDNIGS 116
Query: 400 KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK 459
+L L+ IAKG+ ++ EE+ + H +L N+L+ I++ G ++ L+ +
Sbjct: 117 QLLLNWCVQIAKGMMYL-----EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
Query: 460 TCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLELLT 493
++++G P K + + Q DV+S+GV + EL+T
Sbjct: 172 K-EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 153 VAKGMEFLASR----KXI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 259
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGN 568
+ + +A + L C P RPT +E++E + ++ N
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 24/164 (14%)
Query: 342 EFSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW 399
EF + ++ HP+++ L VC + T + LV + +G LL + E K +
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ---LVTQLMPHGCLLEYVH---EHKDNIGS 139
Query: 400 KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK 459
+L L+ IAKG+ ++ EE+ + H +L N+L+ I++ G ++ L+ +
Sbjct: 140 QLLLNWCVQIAKGMMYL-----EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 194
Query: 460 TCLFSSNGYTAPEKTV----------SEQGDVFSFGVILLELLT 493
++++G P K + + Q DV+S+GV + EL+T
Sbjct: 195 K-EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 403 LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL 462
+S + +A+G++F+ + K I H +L NILL+EN ++ C + D K
Sbjct: 202 ISYSFQVARGMEFL----SSRKCI-HRDLAARNILLSENN--VVKICDFGLARDIYKNPD 254
Query: 463 FSSNG-------YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAM 511
+ G + APE K S + DV+S+GV+L E+ + G+ + + +
Sbjct: 255 YVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSR 314
Query: 512 VREEWTGEVFDKEVAKAGRQWAFP-LLNVALKCVSNSPDDRPTMAEVLERIEEVV 565
+RE + +++ P + + L C P +RP AE++E++ +++
Sbjct: 315 LREG---------MRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFP 398
+MD+F + + + +L H N++ L T K+ V + GSLL L + + F
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH---QGHFL 113
Query: 399 WKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPK 458
A +A+G+ ++ E K H +L N+LL + I + G + L P+
Sbjct: 114 LGTLSRYAVQVAEGMGYL-----ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQ 167
Query: 459 KTCLFSSN-------GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKW 507
+ + APE +T S D + FGV L E+ T G++ +
Sbjct: 168 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 227
Query: 508 VKAMVREEWTGEVFDKEVAKAGRQWAFP--LLNVALKCVSNSPDDRPTMAEV 557
+ + DKE + R P + NV ++C ++ P+DRPT +
Sbjct: 228 LHKI----------DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFP 398
+MD+F + + + +L H N++ L T K+ V + GSLL L + + F
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH---QGHFL 113
Query: 399 WKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPK 458
A +A+G+ ++ E K H +L N+LL + I + G + L P+
Sbjct: 114 LGTLSRYAVQVAEGMGYL-----ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQ 167
Query: 459 KTCLFSSN-------GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKW 507
+ + APE +T S D + FGV L E+ T G++ +
Sbjct: 168 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 227
Query: 508 VKAMVREEWTGEVFDKEVAKAGRQWAFP--LLNVALKCVSNSPDDRPTMAEV 557
+ + DKE + R P + NV ++C ++ P+DRPT +
Sbjct: 228 LHKI----------DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFP 398
+MD+F + + + +L H N++ L T K+ V + GSLL L + + F
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH---QGHFL 109
Query: 399 WKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPK 458
A +A+G+ ++ E K H +L N+LL + I + G + L P+
Sbjct: 110 LGTLSRYAVQVAEGMGYL-----ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQ 163
Query: 459 KTCLFSSN-------GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKW 507
+ + APE +T S D + FGV L E+ T G++ +
Sbjct: 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
Query: 508 VKAMVREEWTGEVFDKEVAKAGRQWAFP--LLNVALKCVSNSPDDRPTMAEV 557
+ + DKE + R P + NV ++C ++ P+DRPT +
Sbjct: 224 LHKI----------DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFP 398
+MD+F + + + +L H N++ L T K+ V + GSLL L + + F
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH---QGHFL 109
Query: 399 WKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPK 458
A +A+G+ ++ E K H +L N+LL + I + G + L P+
Sbjct: 110 LGTLSRYAVQVAEGMGYL-----ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQ 163
Query: 459 KTCLFSSN-------GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKW 507
+ + APE +T S D + FGV L E+ T G++ +
Sbjct: 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
Query: 508 VKAMVREEWTGEVFDKEVAKAGRQWAFP--LLNVALKCVSNSPDDRPTMAEV 557
+ + DKE + R P + NV ++C ++ P+DRPT +
Sbjct: 224 LHKI----------DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 202 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 308
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGN 568
+ + +A + L C P RPT +E++E + ++ N
Sbjct: 309 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
A+K ++K VS S+ + ++ LK HPNI+ L + LV + G L
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE-DP 444
I + F I + G+ ++++ + I H +LK N+LL E D
Sbjct: 126 ----EIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN-----IVHRDLKPENLLLESKEKDA 176
Query: 445 LIS--ECGYSKFLDPKKTC--LFSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG 494
LI + G S + +K + Y APE K E+ DV+S GVIL LL G
Sbjct: 177 LIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDP---KKTCLF 463
+AKG++F+ + K I H +L NILL+E I + G ++ + DP +K
Sbjct: 200 VAKGMEFLASR----KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 464 SSNGYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE + + Q DV+SFGV+L E+ + G+ + EE+
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------IDEEFCRR 306
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGN 568
+ + +A + L C P RPT +E++E + ++ N
Sbjct: 307 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 355
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 49/258 (18%)
Query: 329 AVKRLKKLQVSMD--EFSQTMRQIGNL-KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
A+KR+K+ D +F+ + + L HPNI+ L+ L +Y +G+LL
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 386 LLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKTIPHGNLKL 433
L + D + + L A +A+G+D++ QK H +L
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-----FIHRDLAA 160
Query: 434 SNILLNENEDPLISECGYSKFLD--PKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVI 487
NIL+ EN I++ G S+ + KKT + A E + DV+S+GV+
Sbjct: 161 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 220
Query: 488 LLELLT-------GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVA 540
L E+++ G T + LP+ + EV+D +
Sbjct: 221 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYD----------------LM 264
Query: 541 LKCVSNSPDDRPTMAEVL 558
+C P +RP+ A++L
Sbjct: 265 RQCWREKPYERPSFAQIL 282
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 33/232 (14%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFP 398
+MD+F + + + +L H N++ L T K+ V + GSLL L + + F
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH---QGHFL 119
Query: 399 WKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPK 458
A +A+G+ ++ E K H +L N+LL + I + G + L P+
Sbjct: 120 LGTLSRYAVQVAEGMGYL-----ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQ 173
Query: 459 KTCLFSSN-------GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKW 507
+ + APE +T S D + FGV L E+ T G++ +
Sbjct: 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233
Query: 508 VKAMVREEWTGEVFDKEVAKAGRQWAFP--LLNVALKCVSNSPDDRPTMAEV 557
+ + DKE + R P + NV ++C ++ P+DRPT +
Sbjct: 234 LHKI----------DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + ++ Y
Sbjct: 154 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWY 208
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 267
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 268 KKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 328 FAQYHDPDDEPVADPYDQSFES 349
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 37/233 (15%)
Query: 341 DEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRD---F 397
+ F + + L H +++ +E +LV ++ GSL + Y++ ++
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSL----DTYLKKNKNCINI 112
Query: 398 PWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP 457
WKL +A +A + F+ EE T+ HGN+ NILL ED + K DP
Sbjct: 113 LWKLE--VAKQLAAAMHFL-----EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165
Query: 458 -------KKTCLFSSNGYTAPE-----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLP 505
K L + PE K ++ D +SFG L E+ +G + +D
Sbjct: 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ 225
Query: 506 KWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVL 558
+ ++ F ++ + A L N+ C+ PD RP+ ++
Sbjct: 226 RKLQ-----------FYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAII 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 49/258 (18%)
Query: 329 AVKRLKKLQVSMD--EFSQTMRQIGNL-KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
A+KR+K+ D +F+ + + L HPNI+ L+ L +Y +G+LL
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115
Query: 386 LLEAYIEGKRDFPWKLR------------LSIATGIAKGLDFMYQKSNEEKTIPHGNLKL 433
L + D + + L A +A+G+D++ QK H +L
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-----FIHRDLAA 170
Query: 434 SNILLNENEDPLISECGYSKFLD--PKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVI 487
NIL+ EN I++ G S+ + KKT + A E + DV+S+GV+
Sbjct: 171 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 230
Query: 488 LLELLT-------GKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVA 540
L E+++ G T + LP+ + EV+D +
Sbjct: 231 LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYD----------------LM 274
Query: 541 LKCVSNSPDDRPTMAEVL 558
+C P +RP+ A++L
Sbjct: 275 RQCWREKPYERPSFAQIL 292
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 31/231 (13%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFP 398
+MD+F + + + +L H N++ L T K+ V + GSLL L + + F
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH---QGHFL 109
Query: 399 WKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPK 458
A +A+G+ ++ E K H +L N+LL + I + G + L
Sbjct: 110 LGTLSRYAVQVAEGMGYL-----ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 459 KTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWV 508
+ APE +T S D + FGV L E+ T G++ + +
Sbjct: 165 DDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
Query: 509 KAMVREEWTGEVFDKEVAKAGRQWAFP--LLNVALKCVSNSPDDRPTMAEV 557
+ DKE + R P + NV ++C ++ P+DRPT +
Sbjct: 225 HKI----------DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ D + ++ Y
Sbjct: 157 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWY 211
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 270
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 271 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 330
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 331 FAQYHDPDDEPVADPYDQSFES 352
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 45/260 (17%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNL----KHPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
AVK LK DE M ++ + +H NI+ L+ + L++ +Y G LL
Sbjct: 72 AVKMLKS-TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 385 SLL----EAYIEGKRDFPWKLR--LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL 438
+ L EA ++ + P +LR L ++ +A+G+ F+ K H ++ N+LL
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL-----ASKNCIHRDVAARNVLL 185
Query: 439 NENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPEK----TVSEQGDVFSFGVILL 489
I + G ++ + + N + APE + Q DV+S+G++L
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 245
Query: 490 ELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKC 543
E+ + + L + +V ++ ++ K G Q A P + ++ C
Sbjct: 246 EIFS--------LGLNPYPGILVNSKFY------KLVKDGYQMAQPAFAPKNIYSIMQAC 291
Query: 544 VSNSPDDRPTMAEVLERIEE 563
+ P RPT ++ ++E
Sbjct: 292 WALEPTHRPTFQQICSFLQE 311
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 39/212 (18%)
Query: 362 VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRD---FPWKLRLSIATGIAKGLDFMYQ 418
VC+ +E +LV ++ GSL + Y++ ++ WKL +A +A + F+
Sbjct: 80 VCF--CGDENILVQEFVKFGSL----DTYLKKNKNCINILWKLE--VAKQLAWAMHFL-- 129
Query: 419 KSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP-------KKTCLFSSNGYTAP 471
EE T+ HGN+ NILL ED + K DP K L + P
Sbjct: 130 ---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 472 E-----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVA 526
E K ++ D +SFG L E+ +G + +D + K E D+
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR--KLQFYE-------DRHQL 237
Query: 527 KAGRQWAFPLLNVALKCVSNSPDDRPTMAEVL 558
A + A L N+ C+ PD RP+ ++
Sbjct: 238 PAPK--AAELANLINNCMDYEPDHRPSFRAII 267
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 31/231 (13%)
Query: 339 SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFP 398
+MD+F + + + +L H N++ L T K+ V + GSLL L + + F
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH---QGHFL 119
Query: 399 WKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPK 458
A +A+G+ ++ E K H +L N+LL + I + G + L
Sbjct: 120 LGTLSRYAVQVAEGMGYL-----ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174
Query: 459 KTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWV 508
+ APE +T S D + FGV L E+ T G++ + +
Sbjct: 175 DDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 234
Query: 509 KAMVREEWTGEVFDKEVAKAGRQWAFP--LLNVALKCVSNSPDDRPTMAEV 557
+ DKE + R P + NV ++C ++ P+DRPT +
Sbjct: 235 HKI----------DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 28/175 (16%)
Query: 352 NLKHPNILPLVCY----NSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+KH NIL + S + + L+ + GSL L+A + W IA
Sbjct: 74 GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNELCHIAE 128
Query: 408 GIAKGLDFMYQ-----KSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTC- 461
+A+GL ++++ K + I H ++K N+LL N I++ G + + K+
Sbjct: 129 TMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAG 188
Query: 462 ----LFSSNGYTAP---EKTVSEQGDVF------SFGVILLELLTGKTVEKTGID 503
+ Y AP E ++ Q D F + G++L EL + T +D
Sbjct: 189 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
+ KGL +++ + H +LK N+ +NE+ + I + G ++ D + T + Y
Sbjct: 153 MLKGLKYIHSAG-----VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWY 207
Query: 469 TAPEKTVS-----EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDK 523
APE +S + D++S G I+ E+LTGKT+ K L + + + G F +
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267
Query: 524 EV-AKAGRQWAFPLLNVALKCVSN-SPDDRPTMAEVLERIEEV 564
++ KA + + L K + P P A++LE++ E+
Sbjct: 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLEL 310
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
+ KGL +++ + H +LK N+ +NE+ + I + G ++ D + T + Y
Sbjct: 135 MLKGLKYIHSAG-----VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWY 189
Query: 469 TAPEKTVS-----EQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDK 523
APE +S + D++S G I+ E+LTGKT+ K L + + + G F +
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249
Query: 524 EV-AKAGRQWAFPLLNVALKCVSN-SPDDRPTMAEVLERIEEV 564
++ KA + + L K + P P A++LE++ E+
Sbjct: 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLEL 292
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 53/227 (23%)
Query: 299 DDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNL----K 354
+D+L A R QT + L S YAVK ++K + S+ R++ L
Sbjct: 18 EDVLGEGAHARVQTC------INLITSQEYAVKIIEKQPGHIR--SRVFREVEMLYQCQG 69
Query: 355 HPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLD 414
H N+L L+ + + LV++ GS+LS +I +R F + +A LD
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILS----HIHKRRHFNELEASVVVQDVASALD 125
Query: 415 FMYQKSNEEKTIPHGNLKLSNIL----------------------LNENEDP-----LIS 447
F++ K I H +LK NIL LN + P L++
Sbjct: 126 FLHNKG-----IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT 180
Query: 448 ECGYSKFLDPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTG 494
CG ++++ P+ FS ++ D++S GVIL LL+G
Sbjct: 181 PCGSAEYMAPEVVEAFSEEA-----SIYDKRCDLWSLGVILYILLSG 222
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 53/227 (23%)
Query: 299 DDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNL----K 354
+D+L A R QT + L S YAVK ++K + S+ R++ L
Sbjct: 18 EDVLGEGAHARVQTC------INLITSQEYAVKIIEKQPGHIR--SRVFREVEMLYQCQG 69
Query: 355 HPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLD 414
H N+L L+ + + LV++ GS+LS +I +R F + +A LD
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILS----HIHKRRHFNELEASVVVQDVASALD 125
Query: 415 FMYQKSNEEKTIPHGNLKLSNIL----------------------LNENEDP-----LIS 447
F++ K I H +LK NIL LN + P L++
Sbjct: 126 FLHNKG-----IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180
Query: 448 ECGYSKFLDPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTG 494
CG ++++ P+ FS ++ D++S GVIL LL+G
Sbjct: 181 PCGSAEYMAPEVVEAFSEEA-----SIYDKRCDLWSLGVILYILLSG 222
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 353 LKHPNILPLVCY----NSTNEEKLLVYKYQSNGSLLSLLEAY---IEGKRDFPWKLRLSI 405
L+H NIL + N T + LV Y +GSL L Y +EG KL LS
Sbjct: 60 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI----KLALST 115
Query: 406 ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL--- 462
A+G+A L + + I H +LK NIL+ +N I++ G + D +
Sbjct: 116 ASGLAH-LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 174
Query: 463 ----FSSNGYTAPEKTVS----------EQGDVFSFGVILLEL 491
+ Y APE ++ D+++ G++ E+
Sbjct: 175 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 323 KNSAVYAVKRLKKLQVSMDEFSQTMRQIG---NLKHPNILPLVCYNSTNEEKLLVYKYQS 379
K + VY + KL S +R+I LKH NI+ L T + LV+++
Sbjct: 27 KTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD 86
Query: 380 NGSLLSLLEAYIEGKR--DFPWKLRLSIAT----GIAKGLDFMYQKSNEEKTIPHGNLKL 433
N L+ Y++ + + P L L++ + +GL F + E I H +LK
Sbjct: 87 ND-----LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH-----ENKILHRDLKP 136
Query: 434 SNILLNENEDPLISECGYSK-FLDPKKTCLFSSN----GYTAPE-----KTVSEQGDVFS 483
N+L+N+ + + G ++ F P T FSS Y AP+ +T S D++S
Sbjct: 137 QNLLINKRGQLKLGDFGLARAFGIPVNT--FSSEVVTLWYRAPDVLMGSRTYSTSIDIWS 194
Query: 484 FGVILLELLTGKTV 497
G IL E++TGK +
Sbjct: 195 CGCILAEMITGKPL 208
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 353 LKHPNILPLVCY----NSTNEEKLLVYKYQSNGSLLSLLEAY---IEGKRDFPWKLRLSI 405
L+H NIL + N T + LV Y +GSL L Y +EG KL LS
Sbjct: 57 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI----KLALST 112
Query: 406 ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL--- 462
A+G+A L + + I H +LK NIL+ +N I++ G + D +
Sbjct: 113 ASGLAH-LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 171
Query: 463 ----FSSNGYTAPEKTVS----------EQGDVFSFGVILLEL 491
+ Y APE ++ D+++ G++ E+
Sbjct: 172 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 353 LKHPNILPLVCY----NSTNEEKLLVYKYQSNGSLLSLLEAY---IEGKRDFPWKLRLSI 405
L+H NIL + N T + LV Y +GSL L Y +EG KL LS
Sbjct: 55 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI----KLALST 110
Query: 406 ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL--- 462
A+G+A L + + I H +LK NIL+ +N I++ G + D +
Sbjct: 111 ASGLAH-LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 169
Query: 463 ----FSSNGYTAPEKTVS----------EQGDVFSFGVILLEL 491
+ Y APE ++ D+++ G++ E+
Sbjct: 170 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 353 LKHPNILPLVCY----NSTNEEKLLVYKYQSNGSLLSLLEAY---IEGKRDFPWKLRLSI 405
L+H NIL + N T + LV Y +GSL L Y +EG KL LS
Sbjct: 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI----KLALST 109
Query: 406 ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL--- 462
A+G+A L + + I H +LK NIL+ +N I++ G + D +
Sbjct: 110 ASGLAH-LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 168
Query: 463 ----FSSNGYTAPEKTVS----------EQGDVFSFGVILLEL 491
+ Y APE ++ D+++ G++ E+
Sbjct: 169 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Query: 312 TICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQI---GNLKHPNIL-------PL 361
++CS+ + RL+ AVK+L + S+ +T R++ +LKH N++ P
Sbjct: 43 SVCSA-YDARLRQKV--AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPA 99
Query: 362 VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSN 421
+E L+ ++ + + +A + F + + +GL +++
Sbjct: 100 TSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-------LVYQLLRGLKYIHSAG- 151
Query: 422 EEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPEKTV-----S 476
I H +LK SN+ +NE+ + I + G ++ D + T ++ Y APE + +
Sbjct: 152 ----IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 477 EQGDVFSFGVILLELLTGKTV 497
+ D++S G I+ ELL GK +
Sbjct: 208 QTVDIWSVGCIMAELLQGKAL 228
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ + T ++ Y
Sbjct: 141 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 254
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 315 FAQYHDPDDEPVADPYDQSFES 336
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 353 LKHPNILPLVCY----NSTNEEKLLVYKYQSNGSLLSLLEAY---IEGKRDFPWKLRLSI 405
L+H NIL + N T + LV Y +GSL L Y +EG KL LS
Sbjct: 80 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI----KLALST 135
Query: 406 ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL--- 462
A+G+A L + + I H +LK NIL+ +N I++ G + D +
Sbjct: 136 ASGLAH-LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 194
Query: 463 ----FSSNGYTAPEKTVS----------EQGDVFSFGVILLEL 491
+ Y APE ++ D+++ G++ E+
Sbjct: 195 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + ++ D + T ++ Y
Sbjct: 134 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWY 188
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 247
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP--------------DDRPTMAEVLER-- 560
K +++ R + P +N A + +P D R T A+ L
Sbjct: 248 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
Query: 561 IEEVVNGNDERDRDHSNSSFSS 582
+ + +DE D + SF S
Sbjct: 308 FAQYHDPDDEPVADPYDQSFES 329
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 353 LKHPNILPLVCY----NSTNEEKLLVYKYQSNGSLLSLLEAY---IEGKRDFPWKLRLSI 405
L+H NIL + N T + LV Y +GSL L Y +EG KL LS
Sbjct: 93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI----KLALST 148
Query: 406 ATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL--- 462
A+G+A L + + I H +LK NIL+ +N I++ G + D +
Sbjct: 149 ASGLAH-LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 207
Query: 463 ----FSSNGYTAPEKTVS----------EQGDVFSFGVILLEL 491
+ Y APE ++ D+++ G++ E+
Sbjct: 208 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 321 RLKNSAVYAVKRLKK-LQVSMDEFSQTMRQIGNLKHPNILPLV-----CYNSTNEEKLLV 374
R +YAVK LKK + + D+ TM + L P P + C+ T + V
Sbjct: 41 RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFV 99
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+Y + G L+ +I+ F + A IA GL F+ + K I + +LKL
Sbjct: 100 MEYVNGGDLMY----HIQQVGRFKEPHAVFYAAEIAIGLFFL-----QSKGIIYRDLKLD 150
Query: 435 NILLNENEDPLISECGYSK--FLDPKKTCLF-SSNGYTAPE----KTVSEQGDVFSFGVI 487
N++L+ I++ G K D T F + Y APE + + D ++FGV+
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 210
Query: 488 LLELLTGKT 496
L E+L G+
Sbjct: 211 LYEMLAGQA 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 29/198 (14%)
Query: 322 LKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNL-KHPNILPLVCY----NSTNEEKLLVYK 376
L + YA+KR+ + E +Q + L HPNIL LV Y E L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 377 YQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNI 436
+ G+L + +E + L + GI +GL+ ++ K H +LK +NI
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-----YAHRDLKPTNI 165
Query: 437 LLNENEDPLISECGYSK----FLDPKKTCLFSSN--------GYTAPEK-------TVSE 477
LL + P++ + G ++ + L + Y APE + E
Sbjct: 166 LLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDE 225
Query: 478 QGDVFSFGVILLELLTGK 495
+ DV+S G +L ++ G+
Sbjct: 226 RTDVWSLGCVLYAMMFGE 243
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 336 LQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKR 395
++ D+F ++ I ++K+ L + +E ++Y+Y N S+L E + +
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 396 DFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL 455
++ + + + I K + + + EK I H ++K SNIL+++N +S+ G S+++
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
Query: 456 DPKKTCLFSSNG---YTAPEKTVSEQG------DVFSFGVIL 488
KK + S G + PE +E D++S G+ L
Sbjct: 203 VDKK--IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 321 RLKNSAVYAVKRLKK-LQVSMDEFSQTMRQIGNLKHPNILPLV-----CYNSTNEEKLLV 374
R +YAVK LKK + + D+ TM + L P P + C+ T + V
Sbjct: 362 RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFV 420
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+Y + G L+ +I+ F + A IA GL F+ + K I + +LKL
Sbjct: 421 MEYVNGGDLM----YHIQQVGRFKEPHAVFYAAEIAIGLFFL-----QSKGIIYRDLKLD 471
Query: 435 NILLNENEDPLISECGYSK--FLDPKKTCLF-SSNGYTAPE----KTVSEQGDVFSFGVI 487
N++L+ I++ G K D T F + Y APE + + D ++FGV+
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 531
Query: 488 LLELLTGKT 496
L E+L G+
Sbjct: 532 LYEMLAGQA 540
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Query: 312 TICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQI---GNLKHPNIL-------PL 361
++CS+ + RL+ AVK+L + S+ +T R++ +LKH N++ P
Sbjct: 43 SVCSA-YDARLRQKV--AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPA 99
Query: 362 VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSN 421
+E L+ ++ + + +A + F + + +GL +++
Sbjct: 100 TSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-------LVYQLLRGLKYIHSAG- 151
Query: 422 EEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPEKTV-----S 476
I H +LK SN+ +NE+ + I + G ++ D + T ++ Y APE + +
Sbjct: 152 ----IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 477 EQGDVFSFGVILLELLTGKTV 497
+ D++S G I+ ELL GK +
Sbjct: 208 QTVDIWSVGCIMAELLQGKAL 228
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 352 NLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS-LLEAYIEGKRDFPWKLRLSIATGIA 410
+KHPNI+ L + L+ + S G L ++E +RD RL I
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RL-----IF 123
Query: 411 KGLDFMYQKSNEEKTIPHGNLKLSNIL---LNENEDPLISECGYSKFLDPKK--TCLFSS 465
+ LD + K + I H +LK N+L L+E+ +IS+ G SK DP + +
Sbjct: 124 QVLDAV--KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 466 NGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
GY APE K S+ D +S GVI LL G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 352 NLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS-LLEAYIEGKRDFPWKLRLSIATGIA 410
+KHPNI+ L + L+ + S G L ++E +RD RL I
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RL-----IF 123
Query: 411 KGLDFMYQKSNEEKTIPHGNLKLSNIL---LNENEDPLISECGYSKFLDPKK--TCLFSS 465
+ LD + K + I H +LK N+L L+E+ +IS+ G SK DP + +
Sbjct: 124 QVLDAV--KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 466 NGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
GY APE K S+ D +S GVI LL G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 352 NLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS-LLEAYIEGKRDFPWKLRLSIATGIA 410
+KHPNI+ L + L+ + S G L ++E +RD RL I
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RL-----IF 123
Query: 411 KGLDFMYQKSNEEKTIPHGNLKLSNIL---LNENEDPLISECGYSKFLDPKK--TCLFSS 465
+ LD + K + I H +LK N+L L+E+ +IS+ G SK DP + +
Sbjct: 124 QVLDAV--KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 466 NGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
GY APE K S+ D +S GVI LL G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 324 NSAVYAVKRLKKLQVSMDEFSQTMRQIGNLK--HPNILPL---VCYNSTNEEKLLVYKYQ 378
A+ AVK+L+ D+ R+I LK H + + V Y E LV +Y
Sbjct: 35 TGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 379 SNGSLLSLLE---AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSN 435
+G L L+ A ++ R L ++ I KG++++ + H +L N
Sbjct: 93 PSGCLRDFLQRHRARLDASR------LLLYSSQICKGMEYL-----GSRRCVHRDLAARN 141
Query: 436 ILLNENEDPLISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFG 485
IL+ I++ G +K L +P ++ +F + + S Q DV+SFG
Sbjct: 142 ILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 201
Query: 486 VILLELLT 493
V+L EL T
Sbjct: 202 VVLYELFT 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 293 KERFKLDDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQ--- 349
K +F +DD + L + +N + A+K L K Q+ + +R+
Sbjct: 8 KRKFTIDDF-DIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 350 -IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATG 408
+L+HPNIL + Y + L+ ++ G L L+ + G+ F + +
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GR--FDEQRSATFMEE 122
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP-KKTCLFSSNG 467
+A L + + E+ + H ++K N+L+ + I++ G+S ++ + +
Sbjct: 123 LADALHYCH-----ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLD 177
Query: 468 YTAPE----KTVSEQGDVFSFGVILLELLTG 494
Y PE KT E+ D++ GV+ E L G
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 293 KERFKLDDLLEATADLRSQTICSSLFMVRLK-NSAVYAVKRLKKLQVSMDEFSQTMRQ-- 349
K +F +DD + ++++ R K N + A+K L K Q+ + +R+
Sbjct: 9 KRKFTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 66
Query: 350 --IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+L+HPNIL + Y + L+ ++ G L L+ + G+ F + +
Sbjct: 67 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GR--FDEQRSATFME 122
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP-KKTCLFSSN 466
+A L + + E+ + H ++K N+L+ + I++ G+S ++ + +
Sbjct: 123 ELADALHYCH-----ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 177
Query: 467 GYTAPE----KTVSEQGDVFSFGVILLELLTG 494
Y PE KT E+ D++ GV+ E L G
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 352 NLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS-LLEAYIEGKRDFPWKLRLSIATGIA 410
+KHPNI+ L + L+ + S G L ++E +RD RL I
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS---RL-----IF 123
Query: 411 KGLDFMYQKSNEEKTIPHGNLKLSNIL---LNENEDPLISECGYSKFLDPKK--TCLFSS 465
+ LD + K + I H +LK N+L L+E+ +IS+ G SK DP + +
Sbjct: 124 QVLDAV--KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 466 NGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
GY APE K S+ D +S GVI LL G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 301 LLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILP 360
++EATA ++ + V++ + + +R + M E + + +GN H NI+
Sbjct: 62 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSEL-KVLSYLGN--HMNIVN 114
Query: 361 LVCYNSTNEEKLLVYKYQSNGSLLSLL----EAYIEGKRD----------FPWKLRLSIA 406
L+ + L++ +Y G LL+ L +++I K + LS +
Sbjct: 115 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 174
Query: 407 TGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSN 466
+AKG+ F+ K H +L NILL I + G ++ + + N
Sbjct: 175 YQVAKGMAFL-----ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 467 G-----YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT 517
+ APE + + DV+S+G+ L EL + + G+ + M++E +
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF- 288
Query: 518 GEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ E A A + ++ C P RPT ++++ IE+ ++
Sbjct: 289 -RMLSPEHAPA------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 330
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ + T ++ Y
Sbjct: 141 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 254
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP 548
K +++ R + P +N A + +P
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANP 286
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
I +GL +++ I H +LK SN+ +NE+ + I + G ++ + T ++ Y
Sbjct: 141 ILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 469 TAPEKTV-----SEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT--GEVF 521
APE + ++ D++S G I+ ELLTG+T+ G D +K ++R T E+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL-FPGTDHIDQLKLILRLVGTPGAELL 254
Query: 522 DKEVAKAGRQW-----AFPLLNVALKCVSNSP 548
K +++ R + P +N A + +P
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANP 286
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 293 KERFKLDDLLEATADLRSQTICSSLFMVRLK-NSAVYAVKRLKKLQVSMDEFSQTMRQ-- 349
K +F +DD + ++++ R K N + A+K L K Q+ + +R+
Sbjct: 8 KRKFTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 350 --IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+L+HPNIL + Y + L+ ++ G L L+ + G+ F + +
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GR--FDEQRSATFME 121
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP-KKTCLFSSN 466
+A L + + E+ + H ++K N+L+ + I++ G+S ++ + +
Sbjct: 122 ELADALHYCH-----ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 176
Query: 467 GYTAPE----KTVSEQGDVFSFGVILLELLTG 494
Y PE KT E+ D++ GV+ E L G
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 133 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEY 187
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 30/201 (14%)
Query: 312 TICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQI---GNLKHPNIL-------PL 361
++CS+ + RL+ AVK+L + S+ +T R++ +LKH N++ P
Sbjct: 35 SVCSA-YDARLRQKV--AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPA 91
Query: 362 VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSN 421
+E L+ ++ + + +A + F + + +GL +++
Sbjct: 92 TSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-------LVYQLLRGLKYIHSAG- 143
Query: 422 EEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPEKTV-----S 476
I H +LK SN+ +NE+ + I + G ++ D + T ++ Y APE + +
Sbjct: 144 ----IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 477 EQGDVFSFGVILLELLTGKTV 497
+ D++S G I+ ELL GK +
Sbjct: 200 QTVDIWSVGCIMAELLQGKAL 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 133 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 135 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 133 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 323 KNSAVYAVKRLKKL-QVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNG 381
++ + AVK LK + +F + + NL+H +I+ + ++V++Y +G
Sbjct: 41 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 382 SLLSLLEAY-----IEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLK 432
L L A+ + + + P +L L IA IA G+ ++ + H +L
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL-----ASQHFVHRDLA 155
Query: 433 LSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTA-------PE----KTVSEQGDV 481
N L+ EN I + G S+ D T + G+T PE + + + DV
Sbjct: 156 TRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV 213
Query: 482 FSFGVILLELLT 493
+S GV+L E+ T
Sbjct: 214 WSLGVVLWEIFT 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 153 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 45/277 (16%)
Query: 319 MVRLKNSAVYAVKRLK------KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKL 372
+++ + AVK LK + + M E + + +GN H NI+ L+ + L
Sbjct: 47 LIKSDAAMTVAVKMLKPSAHLTEREALMSEL-KVLSYLGN--HMNIVNLLGACTIGGPTL 103
Query: 373 LVYKYQSNGSLLSLL----EAYIEGKRD----------FPWKLRLSIATGIAKGLDFMYQ 418
++ +Y G LL+ L +++I K + LS + +AKG+ F+
Sbjct: 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL-- 161
Query: 419 KSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPEK 473
K H +L NILL I + G ++ + + N + APE
Sbjct: 162 ---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPES 218
Query: 474 ----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAG 529
+ + DV+S+G+ L EL + + G+ + M++E + + E A A
Sbjct: 219 IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF--RMLSPEHAPA- 275
Query: 530 RQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ ++ C P RPT ++++ IE+ ++
Sbjct: 276 -----EMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 137 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 137 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 290 VNEK-ERFKLDDLL---EATADLRSQTICSSLFMV--RLKNSAVYAVKRLKKLQVSMDEF 343
+ EK E FK+ +LL R+++I + L + + A+Y ++++Q +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 344 SQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRL 403
Q LKHP+IL L Y + LV + NG + L+ + + F
Sbjct: 66 CQ-------LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV---KPFSENEAR 115
Query: 404 SIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS---KFLDPKKT 460
I G+ +++ I H +L LSN+LL N + I++ G + K K
Sbjct: 116 HFMHQIITGMLYLHSHG-----ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170
Query: 461 CLFSSNGYTAPE-KTVSEQG---DVFSFGVILLELLTGK 495
L + Y +PE T S G DV+S G + LL G+
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 50/275 (18%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNL----KHPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
AVK LK DE M ++ + +H NI+ L+ + L++ +Y G LL
Sbjct: 80 AVKMLKS-TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 385 SLLE----------AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+ L A+ + L ++ +A+G+ F+ K H ++
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL-----ASKNCIHRDVAAR 193
Query: 435 NILLNENEDPLISECGYSKFLDPKKTCLFSSNG-----YTAPEK----TVSEQGDVFSFG 485
N+LL I + G ++ + + N + APE + Q DV+S+G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 486 VILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNV 539
++L E+ + + L + +V ++ ++ K G Q A P + ++
Sbjct: 254 ILLWEIFS--------LGLNPYPGILVNSKFY------KLVKDGYQMAQPAFAPKNIYSI 299
Query: 540 ALKCVSNSPDDRPTMAEVLERIEEVVNGNDERDRD 574
C + P RPT ++ ++E D R+RD
Sbjct: 300 MQACWALEPTHRPTFQQICSFLQEQAQ-EDRRERD 333
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPE----KTVSEQGD 480
H +LKL N+ LN++ D I + G + +F +K L + Y APE K S + D
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVA 540
++S G IL LL GK +T +++ + + E++ VA A +
Sbjct: 225 IWSLGCILYTLLVGKPPFETSCLKETYIR-IKKNEYSVPRHINPVASA----------LI 273
Query: 541 LKCVSNSPDDRPTMAEVL 558
+ + P RP++AE+L
Sbjct: 274 RRMLHADPTLRPSVAELL 291
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 342 EFSQTMRQIGNLKHPNILPLV--CYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW 399
+F++ ++ HPN+LP++ C + L+ + GSL ++L D
Sbjct: 53 DFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQ 112
Query: 400 KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFLDPK 458
++ A +A+G+ F++ E IP L +++++E+ IS F P
Sbjct: 113 AVKF--ALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG 167
Query: 459 KTCLFSSNGYTA----PEKTVSEQGDVFSFGVILLELLT 493
+ + A PE T D++SF V+L EL+T
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 324 NSAVYAVKRLKKLQVSMDEFSQTMRQIGNLK--HPNILPL---VCYNSTNEEKLLVYKYQ 378
A+ AVK+L+ D+ R+I LK H + + V Y + LV +Y
Sbjct: 38 TGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 95
Query: 379 SNGSLLSLLE---AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSN 435
+G L L+ A ++ R L ++ I KG++++ + H +L N
Sbjct: 96 PSGCLRDFLQRHRARLDASR------LLLYSSQICKGMEYL-----GSRRCVHRDLAARN 144
Query: 436 ILLNENEDPLISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFG 485
IL+ I++ G +K L +P ++ +F + + S Q DV+SFG
Sbjct: 145 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 204
Query: 486 VILLELLT 493
V+L EL T
Sbjct: 205 VVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 324 NSAVYAVKRLKKLQVSMDEFSQTMRQIGNLK--HPNILPL---VCYNSTNEEKLLVYKYQ 378
A+ AVK+L+ D+ R+I LK H + + V Y + LV +Y
Sbjct: 51 TGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 379 SNGSLLSLLE---AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSN 435
+G L L+ A ++ R L ++ I KG++++ + H +L N
Sbjct: 109 PSGCLRDFLQRHRARLDASR------LLLYSSQICKGMEYL-----GSRRCVHRDLAARN 157
Query: 436 ILLNENEDPLISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFG 485
IL+ I++ G +K L +P ++ +F + + S Q DV+SFG
Sbjct: 158 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 217
Query: 486 VILLELLT 493
V+L EL T
Sbjct: 218 VVLYELFT 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 301 LLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILP 360
++EATA ++ + V++ + + +R + M E + + +GN H NI+
Sbjct: 55 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSEL-KVLSYLGN--HMNIVN 107
Query: 361 LVCYNSTNEEKLLVYKYQSNGSLLSLL----EAYIEGKRD----------FPWKLRLSIA 406
L+ + L++ +Y G LL+ L +++I K + LS +
Sbjct: 108 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 167
Query: 407 TGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSN 466
+AKG+ F+ K H +L NILL I + G ++ + + N
Sbjct: 168 YQVAKGMAFL-----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 467 G-----YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT 517
+ APE + + DV+S+G+ L EL + + G+ + M++E +
Sbjct: 223 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF- 281
Query: 518 GEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ E A A + ++ C P RPT ++++ IE+ ++
Sbjct: 282 -RMLSPEHAPA------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 323
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 324 NSAVYAVKRLKKLQVSMDEFSQTMRQIGNLK--HPNILPL---VCYNSTNEEKLLVYKYQ 378
A+ AVK+L+ D+ R+I LK H + + V Y + LV +Y
Sbjct: 39 TGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 96
Query: 379 SNGSLLSLLE---AYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSN 435
+G L L+ A ++ R L ++ I KG++++ + H +L N
Sbjct: 97 PSGCLRDFLQRHRARLDASR------LLLYSSQICKGMEYL-----GSRRCVHRDLAARN 145
Query: 436 ILLNENEDPLISECGYSKFL----------DPKKTCLFSSNGYTAPEKTVSEQGDVFSFG 485
IL+ I++ G +K L +P ++ +F + + S Q DV+SFG
Sbjct: 146 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFG 205
Query: 486 VILLELLT 493
V+L EL T
Sbjct: 206 VVLYELFT 213
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPE----KTVSEQGD 480
H +LKL N+ LN++ D I + G + +F +K L + Y APE K S + D
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVA 540
++S G IL LL GK +T +++ + + E++ VA A +
Sbjct: 225 IWSLGCILYTLLVGKPPFETSCLKETYIR-IKKNEYSVPRHINPVASA----------LI 273
Query: 541 LKCVSNSPDDRPTMAEVL 558
+ + P RP++AE+L
Sbjct: 274 RRMLHADPTLRPSVAELL 291
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 301 LLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILP 360
++EATA ++ + V++ + + +R + M E + + +GN H NI+
Sbjct: 57 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSEL-KVLSYLGN--HMNIVN 109
Query: 361 LVCYNSTNEEKLLVYKYQSNGSLLSLL----EAYIEGKRD----------FPWKLRLSIA 406
L+ + L++ +Y G LL+ L +++I K + LS +
Sbjct: 110 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 169
Query: 407 TGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSN 466
+AKG+ F+ K H +L NILL I + G ++ + + N
Sbjct: 170 YQVAKGMAFL-----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 467 G-----YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT 517
+ APE + + DV+S+G+ L EL + + G+ + M++E +
Sbjct: 225 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF- 283
Query: 518 GEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ E A A + ++ C P RPT ++++ IE+ ++
Sbjct: 284 -RMLSPEHAPA------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 325
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 301 LLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILP 360
++EATA ++ + V++ + + +R + M E + + +GN H NI+
Sbjct: 62 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSEL-KVLSYLGN--HMNIVN 114
Query: 361 LVCYNSTNEEKLLVYKYQSNGSLLSLL----EAYIEGKRD----------FPWKLRLSIA 406
L+ + L++ +Y G LL+ L +++I K + LS +
Sbjct: 115 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 174
Query: 407 TGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSN 466
+AKG+ F+ K H +L NILL I + G ++ + + N
Sbjct: 175 YQVAKGMAFL-----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 467 G-----YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWT 517
+ APE + + DV+S+G+ L EL + + G+ + M++E +
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF- 288
Query: 518 GEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEEVVN 566
+ E A A + ++ C P RPT ++++ IE+ ++
Sbjct: 289 -RMLSPEHAPA------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 330
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 373 LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT---GIAKGLDFMYQKSNEEKTIPHG 429
++ +Y GS L LL A G D IAT I KGLD+++ EK I H
Sbjct: 98 IIMEYLGGGSALDLLRA---GPFD-----EFQIATMLKEILKGLDYLH----SEKKI-HR 144
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTAPE----KTVSEQGDVF 482
++K +N+LL+E D +++ G + L K+ + + APE + D++
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIW 204
Query: 483 SFGVILLELLTGK 495
S G+ +EL G+
Sbjct: 205 SLGITAIELAKGE 217
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGN---LKHP 356
D E D+ S + M +++ + AVK +++ + +DE R+I N L+HP
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-KIDE--NVKREIINHRSLRHP 74
Query: 357 NILPLVCYNSTNEEKLLVYKYQSNGSLLSLL---EAYIEGKRDFPWKLRLSIATGIAKGL 413
NI+ T +V +Y S G L + + E + F ++ +S G+
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GV 127
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC--GYSK--FLDPKKTCLFSSNGYT 469
+ + + H +LKL N LL+ + P + C GYSK L + + Y
Sbjct: 128 SYCHAMQ-----VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI 182
Query: 470 APEKTVSEQ-----GDVFSFGVILLELLTG 494
APE + ++ DV+S GV L +L G
Sbjct: 183 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 135 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 137 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 133 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 135 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 229
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGN---LKHP 356
D E D+ S + M +++ + AVK +++ + +DE R+I N L+HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-KIDE--NVKREIINHRSLRHP 75
Query: 357 NILPLVCYNSTNEEKLLVYKYQSNGSLLSLL---EAYIEGKRDFPWKLRLSIATGIAKGL 413
NI+ T +V +Y S G L + + E + F ++ +S G+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GV 128
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC--GYSK--FLDPKKTCLFSSNGYT 469
+ + + H +LKL N LL+ + P + C GYSK L + + Y
Sbjct: 129 SYCHAMQ-----VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYI 183
Query: 470 APEKTVSEQ-----GDVFSFGVILLELLTG 494
APE + ++ DV+S GV L +L G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 328 YAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLL 387
+AVK + K + E + + + G +HPNI+ L + +V + G LL
Sbjct: 50 FAVKIIDKSKRDPTEEIEILLRYG--QHPNIITLKDVYDDGKYVYVVTELMKGGELLD-- 105
Query: 388 EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNIL-LNENEDP-- 444
I ++ F + ++ I K +++++ + + H +LK SNIL ++E+ +P
Sbjct: 106 --KILRQKFFSEREASAVLFTITKTVEYLHAQG-----VVHRDLKPSNILYVDESGNPES 158
Query: 445 -LISECGYSKFLDPKKTCLFS---SNGYTAPEKTVSEQG-----DVFSFGVILLELLTGK 495
I + G++K L + L + + + APE + QG D++S GV+L +LTG
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLERQGYDAACDIWSLGVLLYTMLTGY 217
Query: 496 TVEKTGID 503
T G D
Sbjct: 218 TPFANGPD 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 97/264 (36%), Gaps = 43/264 (16%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I L H NI+ + + + + ++ + + G L S
Sbjct: 65 AVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 124
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 125 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 178
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 179 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 491 LLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQ-----WAFPLLNVALKCVS 545
+ + + M + + + V GR P+ + +C
Sbjct: 239 IFS--------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 284
Query: 546 NSPDDRPTMAEVLERIEEVVNGND 569
+ P+DRP A +LERIE D
Sbjct: 285 HQPEDRPNFAIILERIEYCTQDPD 308
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 36/209 (17%)
Query: 329 AVKRLKKLQVSMDEFSQTM-RQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
AVK + K QV +++ R++ LK HPNI+ L + LV + + G L
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL---NEN 441
+ I KR F I + G+ +M++ I H +LK N+LL +++
Sbjct: 115 ---DEIISRKR-FSEVDAARIIRQVLSGITYMHKNK-----IVHRDLKPENLLLESKSKD 165
Query: 442 EDPLISECGYSKFLDPKKTCL--FSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG-- 494
+ I + G S + K + Y APE T E+ DV+S GVIL LL+G
Sbjct: 166 ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCP 225
Query: 495 -----------KTVEKTG--IDLPKWVKA 510
K VEK +LP+W K
Sbjct: 226 PFNGANEYDILKKVEKGKYTFELPQWKKV 254
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 137 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 29/247 (11%)
Query: 263 SPSKSPPQVMDIEEVRPEVRRSELVFFVNEKERFKLDDLLEATADLRSQTICS---SLFM 319
SP K P MD E S+ ++K K D+LL A +L S ++
Sbjct: 301 SPDKPRPMPMDTSVF--ESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYR 358
Query: 320 VRLKNSAVYAVKRLKK--LQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKY 377
+R K V A+K LK+ + +E + + + L +P I+ L+ E +LV +
Sbjct: 359 MRKKQIDV-AIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEM 416
Query: 378 QSNGSLLSLLEAYIEGKRD-FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNI 436
G L ++ GKR+ P + ++ G+ ++ EEK H NL N+
Sbjct: 417 AGGGPL----HKFLVGKREEIPVSNVAELLHQVSMGMKYL-----EEKNFVHRNLAARNV 467
Query: 437 LLNENEDPLISECGYSKFLDPKKTCLFSSNG------YTAPE----KTVSEQGDVFSFGV 486
LL IS+ G SK L + + + + APE + S + DV+S+GV
Sbjct: 468 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 527
Query: 487 ILLELLT 493
+ E L+
Sbjct: 528 TMWEALS 534
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 34/279 (12%)
Query: 294 ERFKLDDLLEATADLRS---QTICSSLFMVRLKNSAVYAVKRL----KKLQVSMDEFSQT 346
E F DD + +DLR + + F ++NS V A+K++ K+ + +
Sbjct: 6 ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65
Query: 347 MRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIA 406
+R + L+HPN + LV +Y GS LLE + K+ ++
Sbjct: 66 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLEVH---KKPLQEVEIAAVT 121
Query: 407 TGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSN 466
G +GL +++ + + H ++K NILL+E + + G + + P +
Sbjct: 122 HGALQGLAYLHSHN-----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-FVGTP 175
Query: 467 GYTAPEKTVS-EQG------DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE ++ ++G DV+S G+ +EL K P
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK---------PPLFNMNAMSALYHI 226
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVL 558
++ A W+ N C+ P DRPT +EVL
Sbjct: 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT-SEVL 264
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 131 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEK---LLVYKYQSNGSLLS 385
AVK +K + F + L+H N++ L+ EEK +V +Y + GSL+
Sbjct: 33 AVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL--GVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L + G+ L + + + ++++ E H +L N+L++E+
Sbjct: 90 YLRS--RGRSVLGGDCLLKFSLDVCEAMEYL-----EGNNFVHRDLAARNVLVSEDNVAK 142
Query: 446 ISECGYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLT 493
+S+ G +K + +TAPE K S + DV+SFG++L E+ +
Sbjct: 143 VSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 153 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 131 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 352 NLKHPNILPLVCYNSTNEEK---LLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATG 408
L+H N++ L+ EEK +V +Y + GSL+ L + G+ L +
Sbjct: 70 QLRHSNLVQLL--GVIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLD 125
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
+ + ++++ E H +L N+L++E+ +S+ G +K + +
Sbjct: 126 VCEAMEYL-----EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 180
Query: 469 TAPE----KTVSEQGDVFSFGVILLELLT 493
TAPE K S + DV+SFG++L E+ +
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 138 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 192
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 139 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 193
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 130 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 184
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 137 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEK---LLVYKYQSNGSLLS 385
AVK +K + F + L+H N++ L+ EEK +V +Y + GSL+
Sbjct: 220 AVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL--GVIVEEKGGLYIVTEYMAKGSLVD 276
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L + G+ L + + + ++++ E H +L N+L++E+
Sbjct: 277 YLRS--RGRSVLGGDCLLKFSLDVCEAMEYL-----EGNNFVHRDLAARNVLVSEDNVAK 329
Query: 446 ISECGYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLT 493
+S+ G +K + +TAPE K S + DV+SFG++L E+ +
Sbjct: 330 VSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 98/259 (37%), Gaps = 33/259 (12%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I L H NI+ + + + + ++ + + G L S
Sbjct: 79 AVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 138
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 139 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 192
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 491 LLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDD 550
+ + + K + ++ +G D G P+ + +C + P+D
Sbjct: 253 IFSLGYMPYPS----KSNQEVLEFVTSGGRMDPPKNCPG-----PVYRIMTQCWQHQPED 303
Query: 551 RPTMAEVLERIEEVVNGND 569
RP A +LERIE D
Sbjct: 304 RPNFAIILERIEYCTQDPD 322
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 327 VYAVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSL 383
+YA+K LKK + + + +T + + + HP I+ L T + L+ + G L
Sbjct: 54 LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL 113
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
+ L + + ++ +A +A LD ++ I + +LK NILL+E
Sbjct: 114 FTRLSKEVMFTEE---DVKFYLAE-LALALDHLHSLG-----IIYRDLKPENILLDEEGH 164
Query: 444 PLISECGYSK-FLDPKKTCLFSSNG---YTAPE----KTVSEQGDVFSFGVILLELLTG 494
+++ G SK +D +K +S G Y APE + ++ D +SFGV++ E+LTG
Sbjct: 165 IKLTDFGLSKESIDHEKKA-YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 327 VYAVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSL 383
+YA+K LKK + + + +T + + + HP I+ L T + L+ + G L
Sbjct: 55 LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL 114
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
+ L + + ++ +A +A LD ++ I + +LK NILL+E
Sbjct: 115 FTRLSKEVMFTEE---DVKFYLAE-LALALDHLHSLG-----IIYRDLKPENILLDEEGH 165
Query: 444 PLISECGYSK-FLDPKKTCLFSSNG---YTAPE----KTVSEQGDVFSFGVILLELLTG 494
+++ G SK +D +K +S G Y APE + ++ D +SFGV++ E+LTG
Sbjct: 166 IKLTDFGLSKESIDHEKKA-YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+L+N D I + G ++ DP+ T
Sbjct: 153 ILRGLKYIHSAN-----VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPE----KTVSEQGD 480
H +LKL N+ LN++ D I + G + +F +K L + Y APE K S + D
Sbjct: 149 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVD 208
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVA 540
++S G IL LL GK +T +++ + + E++ VA A +
Sbjct: 209 IWSLGCILYTLLVGKPPFETSCLKETYIR-IKKNEYSVPRHINPVASA----------LI 257
Query: 541 LKCVSNSPDDRPTMAEVL 558
+ + P RP++AE+L
Sbjct: 258 RRMLHADPTLRPSVAELL 275
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 327 VYAVKRLKKLQVSMDEFSQTMRQ---IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSL 383
+YA+K LKK + + + +T + + + HP I+ L T + L+ + G L
Sbjct: 54 LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL 113
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
+ L + + ++ +A +A LD ++ I + +LK NILL+E
Sbjct: 114 FTRLSKEVMFTEE---DVKFYLAE-LALALDHLHSLG-----IIYRDLKPENILLDEEGH 164
Query: 444 PLISECGYSK-FLDPKKTCLFSSNG---YTAPE----KTVSEQGDVFSFGVILLELLTG 494
+++ G SK +D +K +S G Y APE + ++ D +SFGV++ E+LTG
Sbjct: 165 IKLTDFGLSKESIDHEKKA-YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 141 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 195
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 196 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKK------TCL 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP T
Sbjct: 133 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 34/279 (12%)
Query: 294 ERFKLDDLLEATADLRS---QTICSSLFMVRLKNSAVYAVKRL----KKLQVSMDEFSQT 346
E F DD + +DLR + + F ++NS V A+K++ K+ + +
Sbjct: 45 ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 104
Query: 347 MRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIA 406
+R + L+HPN + LV +Y GS LLE + K+ ++
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLEVH---KKPLQEVEIAAVT 160
Query: 407 TGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSN 466
G +GL +++ + + H ++K NILL+E + + G + + P +
Sbjct: 161 HGALQGLAYLHSHN-----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-FVGTP 214
Query: 467 GYTAPEKTVS-EQG------DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGE 519
+ APE ++ ++G DV+S G+ +EL K P
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK---------PPLFNMNAMSALYHI 265
Query: 520 VFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVL 558
++ A W+ N C+ P DRPT +EVL
Sbjct: 266 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT-SEVL 303
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 329 AVKRLKKLQVSMDEFSQTM-RQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
AVK + K QV +++ R++ LK HPNI+ L + LV + + G L
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 137
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL---NEN 441
+ I KR F I + G+ +M++ I H +LK N+LL +++
Sbjct: 138 ---DEIISRKR-FSEVDAARIIRQVLSGITYMHKNK-----IVHRDLKPENLLLESKSKD 188
Query: 442 EDPLISECGYSKFLDPKKTCL--FSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG-- 494
+ I + G S + K + Y APE T E+ DV+S GVIL LL+G
Sbjct: 189 ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCP 248
Query: 495 -----------KTVEKTG--IDLPKWVK 509
K VEK +LP+W K
Sbjct: 249 PFNGANEYDILKKVEKGKYTFELPQWKK 276
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPE----KTVSEQGD 480
H +LKL N+ LN++ D I + G + +F +K L + Y APE K S + D
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 481 VFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVA 540
++S G IL LL GK +T +++ + + E++ VA A +
Sbjct: 225 IWSLGCILYTLLVGKPPFETSCLKETYIR-IKKNEYSVPRHINPVASA----------LI 273
Query: 541 LKCVSNSPDDRPTMAEVL 558
+ + P RP++AE+L
Sbjct: 274 RRMLHADPTLRPSVAELL 291
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 329 AVKRLKKLQVSMDEFSQTM-RQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
AVK + K QV +++ R++ LK HPNI+ L + LV + + G L
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 138
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL---NEN 441
+ I KR F I + G+ +M++ I H +LK N+LL +++
Sbjct: 139 ---DEIISRKR-FSEVDAARIIRQVLSGITYMHKNK-----IVHRDLKPENLLLESKSKD 189
Query: 442 EDPLISECGYSKFLDPKKTCL--FSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG-- 494
+ I + G S + K + Y APE T E+ DV+S GVIL LL+G
Sbjct: 190 ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCP 249
Query: 495 -----------KTVEKTG--IDLPKWVK 509
K VEK +LP+W K
Sbjct: 250 PFNGANEYDILKKVEKGKYTFELPQWKK 277
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 102/255 (40%), Gaps = 47/255 (18%)
Query: 345 QTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLE----------AYIEGK 394
+ M +G +H NI+ L+ + L++ +Y G LL+ L A+
Sbjct: 101 KIMSHLG--QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 395 RDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKF 454
+ L ++ +A+G+ F+ K H ++ N+LL I + G ++
Sbjct: 159 STASTRDLLHFSSQVAQGMAFL-----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 455 LDPKKTCLFSSNG-----YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLP 505
+ + N + APE + Q DV+S+G++L E+ + + L
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS--------LGLN 265
Query: 506 KWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSPDDRPTMAEVLE 559
+ +V ++ ++ K G Q A P + ++ C + P RPT ++
Sbjct: 266 PYPGILVNSKFY------KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319
Query: 560 RIEEVVNGNDERDRD 574
++E D R+RD
Sbjct: 320 FLQEQAQ-EDRRERD 333
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 34/212 (16%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGN---LKHP 356
D E D+ S + M +++ + AVK +++ + +DE R+I N L+HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE-KIDE--NVKREIINHRSLRHP 75
Query: 357 NILPLVCYNSTNEEKLLVYKYQSNGSLLSLL---EAYIEGKRDFPWKLRLSIATGIAKGL 413
NI+ T +V +Y S G L + + E + F ++ +S G+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GV 128
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC--GYSK----FLDPKKTCLFSSNG 467
+ + + H +LKL N LL+ + P + C GYSK PK T +
Sbjct: 129 SYCHAMQ-----VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPA 181
Query: 468 YTAPEKTVSEQ-----GDVFSFGVILLELLTG 494
Y APE + ++ DV+S GV L +L G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGN---LKHP 356
D E D+ + + M + + + AVK +++ + +DE R+I N L+HP
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE-KIDE--NVKREIINHRSLRHP 75
Query: 357 NILPLVCYNSTNEEKLLVYKYQSNGSLLSLL---EAYIEGKRDFPWKLRLSIATGIAKGL 413
NI+ T +V +Y S G L + + E + F ++ +S G+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GV 128
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPL--ISECGYSK--FLDPKKTCLFSSNGYT 469
+ + + H +LKL N LL+ + P I++ GYSK L + + Y
Sbjct: 129 SYAHAMQ-----VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYI 183
Query: 470 APEKTVSEQ-----GDVFSFGVILLELLTG 494
APE + ++ DV+S GV L +L G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGN---LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
AVK +++ ++DE Q R+I N L+HPNI+ T ++ +Y S G L
Sbjct: 49 AVKYIER-GAAIDENVQ--REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE 105
Query: 386 LL---EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
+ + E + F ++ LS G+ + + I H +LKL N LL+ +
Sbjct: 106 RICNAGRFSEDEARFFFQQLLS-------GVSYCHSMQ-----ICHRDLKLENTLLDGSP 153
Query: 443 DPLISEC--GYSK--FLDPKKTCLFSSNGYTAPEKTVSEQ-----GDVFSFGVILLELLT 493
P + C GYSK L + + Y APE + ++ DV+S GV L +L
Sbjct: 154 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLV 213
Query: 494 G 494
G
Sbjct: 214 G 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 36/209 (17%)
Query: 329 AVKRLKKLQVSMDEFSQTM-RQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
AVK + K QV +++ R++ LK HPNI+ L + LV + + G L
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 120
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL---NEN 441
I ++ F I + G+ +M++ I H +LK N+LL +++
Sbjct: 121 D----EIISRKRFSEVDAARIIRQVLSGITYMHKNK-----IVHRDLKPENLLLESKSKD 171
Query: 442 EDPLISECGYSKFLDPKKTCL--FSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG-- 494
+ I + G S + K + Y APE T E+ DV+S GVIL LL+G
Sbjct: 172 ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCP 231
Query: 495 -----------KTVE--KTGIDLPKWVKA 510
K VE K +LP+W K
Sbjct: 232 PFNGANEYDILKKVEKGKYTFELPQWKKV 260
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 24/207 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNIL 359
D E D+ S + M +++ + AVK +++ + + + +L+HPNI+
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIV 78
Query: 360 PLVCYNSTNEEKLLVYKYQSNGSLLSLL---EAYIEGKRDFPWKLRLSIATGIAKGLDFM 416
T +V +Y S G L + + E + F ++ +S G+ +
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------GVSYC 131
Query: 417 YQKSNEEKTIPHGNLKLSNILLNENEDPLISEC--GYSK--FLDPKKTCLFSSNGYTAPE 472
+ + H +LKL N LL+ + P + C GYSK L + + Y APE
Sbjct: 132 HAMQ-----VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 186
Query: 473 KTVSEQ-----GDVFSFGVILLELLTG 494
+ ++ DV+S GV L +L G
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 23/188 (12%)
Query: 321 RLKNSAVYAVKRLKK-LQVSMDEFSQTM---RQIGNLKHPNILPLV--CYNSTNEEKLLV 374
R +YA+K LKK + + D+ TM R + L P L + C+ T + V
Sbjct: 40 RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQ-TVDRLYFV 98
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+Y + G L+ +I+ F + A I+ GL F++++ I + +LKL
Sbjct: 99 MEYVNGGDLMY----HIQQVGKFKEPQAVFYAAEISIGLFFLHKRG-----IIYRDLKLD 149
Query: 435 NILLNENEDPLISECGYSK--FLDPKKTCLF-SSNGYTAPE----KTVSEQGDVFSFGVI 487
N++L+ I++ G K +D T F + Y APE + + D +++GV+
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 488 LLELLTGK 495
L E+L G+
Sbjct: 210 LYEMLAGQ 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 131
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 132 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 85/217 (39%), Gaps = 34/217 (15%)
Query: 301 LLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILP 360
LLE A R + + M ++ ++ + Q + FS +KH N+L
Sbjct: 19 LLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTP-----GMKHENLLQ 73
Query: 361 LVCYNSTNE----EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFM 416
+ E L+ + GSL L+ I W +A +++GL ++
Sbjct: 74 FIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYL 128
Query: 417 YQK------SNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKT-----CLFSS 465
++ + +I H + K N+LL + ++++ G + +P K +
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT 188
Query: 466 NGYTAP---EKTVSEQGDVF------SFGVILLELLT 493
Y AP E ++ Q D F + G++L EL++
Sbjct: 189 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGXLLDYVR---EHKDNIGSQYLLNWCV 125
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 126 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 33/259 (12%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 79 AVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 138
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 139 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 192
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 491 LLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDD 550
+ + + K + ++ +G D G P+ + +C + P+D
Sbjct: 253 IFSLGYMPYPS----KSNQEVLEFVTSGGRMDPPKNCPG-----PVYRIMTQCWQHQPED 303
Query: 551 RPTMAEVLERIEEVVNGND 569
RP A +LERIE D
Sbjct: 304 RPNFAIILERIEYCTQDPD 322
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 33/259 (12%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 56 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 115
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 116 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 169
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 170 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 229
Query: 491 LLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDD 550
+ + + K + ++ +G D G P+ + +C + P+D
Sbjct: 230 IFSLGYMPYPS----KSNQEVLEFVTSGGRMDPPKNCPG-----PVYRIMTQCWQHQPED 280
Query: 551 RPTMAEVLERIEEVVNGND 569
RP A +LERIE D
Sbjct: 281 RPNFAIILERIEYCTQDPD 299
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 124
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 125 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 125
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 126 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 118
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 119 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 128
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 129 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 39/262 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 64 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSF 123
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 124 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 177
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 491 LLTGKTV---EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNS 547
+ + + K+ ++ ++V +G D G P+ + +C +
Sbjct: 238 IFSLGYMPYPSKSNQEVLEFVT-------SGGRMDPPKNCPG-----PVYRIMTQCWQHQ 285
Query: 548 PDDRPTMAEVLERIEEVVNGND 569
P+DRP A +LERIE D
Sbjct: 286 PEDRPNFAIILERIEYCTQDPD 307
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 127
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 128 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 39/262 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 65 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 124
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 125 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 178
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 179 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 491 LLTGKTV---EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNS 547
+ + + K+ ++ ++V +G D G P+ + +C +
Sbjct: 239 IFSLGYMPYPSKSNQEVLEFVT-------SGGRMDPPKNCPG-----PVYRIMTQCWQHQ 286
Query: 548 PDDRPTMAEVLERIEEVVNGND 569
P+DRP A +LERIE D
Sbjct: 287 PEDRPNFAIILERIEYCTQDPD 308
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 126
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 127 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 88/224 (39%), Gaps = 48/224 (21%)
Query: 309 RSQTICSSLFMVRLKNSAVY---------------AVKRLKKLQVSMDEFSQTMRQI--- 350
+ I S F VR S Y A+K +KK Q +S + I
Sbjct: 30 KEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKF 89
Query: 351 -----------GNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW 399
+L HPNI+ L + LV ++ G L I + F
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQ----IINRHKFDE 145
Query: 400 KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL----ISECGYSKFL 455
+I I G+ ++++ + I H ++K NILL EN++ L I + G S F
Sbjct: 146 CDAANIMKQILSGICYLHKHN-----IVHRDIKPENILL-ENKNSLLNIKIVDFGLSSFF 199
Query: 456 --DPKKTCLFSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG 494
D K + Y APE K +E+ DV+S GVI+ LL G
Sbjct: 200 SKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 39/262 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 64 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 123
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 124 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 177
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 491 LLTGKTV---EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNS 547
+ + + K+ ++ ++V +G D G P+ + +C +
Sbjct: 238 IFSLGYMPYPSKSNQEVLEFVT-------SGGRMDPPKNCPG-----PVYRIMTQCWQHQ 285
Query: 548 PDDRPTMAEVLERIEEVVNGND 569
P+DRP A +LERIE D
Sbjct: 286 PEDRPNFAIILERIEYCTQDPD 307
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 134
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 135 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 233
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 63/162 (38%), Gaps = 36/162 (22%)
Query: 352 NLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGI 409
NL H NI+ +C L+ ++ +GSL L + K K +L A I
Sbjct: 79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP---KNKNKINLKQQLKYAVQI 135
Query: 410 AKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKT--------- 460
KG+D++ + H +L N+L+ I + G +K ++ K
Sbjct: 136 CKGMDYLGSRQ-----YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRD 190
Query: 461 ---------CLFSSNGYTAPEKTVSEQGDVFSFGVILLELLT 493
CL S Y A DV+SFGV L ELLT
Sbjct: 191 SPVFWYAPECLMQSKFYIA--------SDVWSFGVTLHELLT 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 128
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 129 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 126
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 127 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 33/259 (12%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 79 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSF 138
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 139 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 192
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 491 LLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDD 550
+ + + K + ++ +G D G P+ + +C + P+D
Sbjct: 253 IFSLGYMPYPS----KSNQEVLEFVTSGGRMDPPKNCPG-----PVYRIMTQCWQHQPED 303
Query: 551 RPTMAEVLERIEEVVNGND 569
RP A +LERIE D
Sbjct: 304 RPNFAIILERIEYCTQDPD 322
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 33/259 (12%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 71 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 130
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 131 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 184
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 185 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 244
Query: 491 LLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDD 550
+ + + K + ++ +G D G P+ + +C + P+D
Sbjct: 245 IFSLGYMPYPS----KSNQEVLEFVTSGGRMDPPKNCPG-----PVYRIMTQCWQHQPED 295
Query: 551 RPTMAEVLERIEEVVNGND 569
RP A +LERIE D
Sbjct: 296 RPNFAIILERIEYCTQDPD 314
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 124
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 125 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPEKTVSEQG----- 479
H +LKL N+ LNE+ + I + G + ++ +K L + Y APE +S++G
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSFEV 196
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
DV+S G I+ LL GK +T +++ + + E++ VA + Q
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETSCLKETYLR-IKKNEYSIPKHINPVAASLIQ-------- 247
Query: 540 ALKCVSNSPDDRPTMAEVL 558
K + P RPT+ E+L
Sbjct: 248 --KMLQTDPTARPTINELL 264
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 127
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 128 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 346 TMRQIGNLK----HPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKL 401
T++++ L+ HPNI+ L TN LV+ G L Y+ K K
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD----YLTEKVTLSEKE 125
Query: 402 RLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP--KK 459
I + + + +++ + I H +LK NILL+++ + +++ G+S LDP K
Sbjct: 126 TRKIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL 180
Query: 460 TCLFSSNGYTAPE----------KTVSEQGDVFSFGVILLELLTG 494
+ + Y APE ++ D++S GVI+ LL G
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 158
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 159 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 257
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 131
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 132 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 130
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 131 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 229
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 126
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 127 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 39/262 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 91 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 150
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 151 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 204
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 205 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 264
Query: 491 LLTGKTV---EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNS 547
+ + + K+ ++ ++V +G D G P+ + +C +
Sbjct: 265 IFSLGYMPYPSKSNQEVLEFVT-------SGGRMDPPKNCPG-----PVYRIMTQCWQHQ 312
Query: 548 PDDRPTMAEVLERIEEVVNGND 569
P+DRP A +LERIE D
Sbjct: 313 PEDRPNFAIILERIEYCTQDPD 334
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 33/259 (12%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 65 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 124
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 125 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 178
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 179 PGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 491 LLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDD 550
+ + + K + ++ +G D G P+ + +C + P+D
Sbjct: 239 IFSLGYMPYPS----KSNQEVLEFVTSGGRMDPPKNCPG-----PVYRIMTQCWQHQPED 289
Query: 551 RPTMAEVLERIEEVVNGND 569
RP A +LERIE D
Sbjct: 290 RPNFAIILERIEYCTQDPD 308
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPEKTVSEQG----- 479
H +LKL N+ LNE+ + I + G + ++ +K L + Y APE +S++G
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSFEV 220
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
DV+S G I+ LL GK +T +++ + + E++ VA + Q
Sbjct: 221 DVWSIGCIMYTLLVGKPPFETSCLKETYLR-IKKNEYSIPKHINPVAASLIQ-------- 271
Query: 540 ALKCVSNSPDDRPTMAEVL 558
K + P RPT+ E+L
Sbjct: 272 --KMLQTDPTARPTINELL 288
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGXLLDYVR---EHKDNIGSQYLLNWCV 124
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 125 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 126
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 127 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 63/162 (38%), Gaps = 36/162 (22%)
Query: 352 NLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGI 409
NL H NI+ +C L+ ++ +GSL L + K K +L A I
Sbjct: 67 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP---KNKNKINLKQQLKYAVQI 123
Query: 410 AKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKT--------- 460
KG+D++ + H +L N+L+ I + G +K ++ K
Sbjct: 124 CKGMDYL-----GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRD 178
Query: 461 ---------CLFSSNGYTAPEKTVSEQGDVFSFGVILLELLT 493
CL S Y A DV+SFGV L ELLT
Sbjct: 179 SPVFWYAPECLMQSKFYIA--------SDVWSFGVTLHELLT 212
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 124
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 125 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPEKTVSEQG----- 479
H +LKL N+ LNE+ + I + G + ++ +K L + Y APE +S++G
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKGHSFEV 202
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
DV+S G I+ LL GK +T +++ + + E++ VA + Q
Sbjct: 203 DVWSIGCIMYTLLVGKPPFETSCLKETYLR-IKKNEYSIPKHINPVAASLIQ-------- 253
Query: 540 ALKCVSNSPDDRPTMAEVL 558
K + P RPT+ E+L
Sbjct: 254 --KMLQTDPTARPTINELL 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 131
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 132 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 127
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 128 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 124
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 125 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPEKTVSEQG----- 479
H +LKL N+ LNE+ + I + G + ++ +K L + Y APE +S++G
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKGHSFEV 198
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
DV+S G I+ LL GK +T +++ + + E++ VA + Q
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLR-IKKNEYSIPKHINPVAASLIQ-------- 249
Query: 540 ALKCVSNSPDDRPTMAEVL 558
K + P RPT+ E+L
Sbjct: 250 --KMLQTDPTARPTINELL 266
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 124
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 125 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 39/262 (14%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 81 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 140
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 141 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 194
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 195 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 254
Query: 491 LLTGKTV---EKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNS 547
+ + + K+ ++ ++V +G D G P+ + +C +
Sbjct: 255 IFSLGYMPYPSKSNQEVLEFVT-------SGGRMDPPKNCPG-----PVYRIMTQCWQHQ 302
Query: 548 PDDRPTMAEVLERIEEVVNGND 569
P+DRP A +LERIE D
Sbjct: 303 PEDRPNFAIILERIEYCTQDPD 324
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 127
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 128 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 346 TMRQIGNLK----HPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKL 401
T++++ L+ HPNI+ L TN LV+ G L Y+ K K
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD----YLTEKVTLSEKE 125
Query: 402 RLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP---- 457
I + + + +++ + I H +LK NILL+++ + +++ G+S LDP
Sbjct: 126 TRKIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL 180
Query: 458 KKTCLFSSNGYTAPE----------KTVSEQGDVFSFGVILLELLTG 494
++ C + Y APE ++ D++S GVI+ LL G
Sbjct: 181 REVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPEKTVSEQG----- 479
H +LKL N+ LNE+ + I + G + ++ +K L + Y APE +S++G
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHSFEV 222
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
DV+S G I+ LL GK +T +++ + + E++ VA + Q
Sbjct: 223 DVWSIGCIMYTLLVGKPPFETSCLKETYLR-IKKNEYSIPKHINPVAASLIQ-------- 273
Query: 540 ALKCVSNSPDDRPTMAEVL 558
K + P RPT+ E+L
Sbjct: 274 --KMLQTDPTARPTINELL 290
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 131
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 132 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 37/160 (23%)
Query: 421 NEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFLDP-KKTCLFSSNGYTAPEK---TV 475
E I H ++K SNILL+ + + + + G S + +D KT Y APE+ +
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 201
Query: 476 SEQG-----DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDK--EVAKA 528
S QG DV+S G+ L EL TG+ PKW VFD+ +V K
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGR------FPYPKW----------NSVFDQLTQVVKG 245
Query: 529 G---------RQWAFPLLNVALKCVSNSPDDRPTMAEVLE 559
R+++ +N C++ RP E+L+
Sbjct: 246 DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 96/264 (36%), Gaps = 43/264 (16%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 82 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 141
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 142 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 195
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 196 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 255
Query: 491 LLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQ-----WAFPLLNVALKCVS 545
+ + + M + + + V GR P+ + +C
Sbjct: 256 IFS--------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 301
Query: 546 NSPDDRPTMAEVLERIEEVVNGND 569
+ P+DRP A +LERIE D
Sbjct: 302 HQPEDRPNFAIILERIEYCTQDPD 325
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 126
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 127 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 428 HGNLKLSNILLNENEDPLISECGYS---KFLDPKKTCLFSSNGYTAPEKTVSEQG----- 479
H +LKL N+ LNE+ + I + G + ++ +K L + Y APE +S++G
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKGHSFEV 198
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
DV+S G I+ LL GK +T +++ + + E++ VA + Q
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLR-IKKNEYSIPKHINPVAASLIQ-------- 249
Query: 540 ALKCVSNSPDDRPTMAEVL 558
K + P RPT+ E+L
Sbjct: 250 --KMLQTDPTARPTINELL 266
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L+HP ++ L + E +++Y++ S G L E + + + KG
Sbjct: 105 LRHPTLVNLHDAFEDDNEMVMIYEFMSGG---ELFEKVADEHNKMSEDEAVEYMRQVCKG 161
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLN---ENEDPLISECGYSKFLDPKKTCLFSSNG-- 467
L M+ E H +LK NI+ NE LI + G + LDPK++ ++
Sbjct: 162 LCHMH-----ENNYVHLDLKPENIMFTTKRSNELKLI-DFGLTAHLDPKQSVKVTTGTAE 215
Query: 468 YTAPE----KTVSEQGDVFSFGVILLELLTG 494
+ APE K V D++S GV+ LL+G
Sbjct: 216 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 42/268 (15%)
Query: 347 MRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIA 406
+R + LKHPN++ L+ LV++Y + ++L L+ Y +R P L SI
Sbjct: 53 IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY-CDHTVLHELDRY---QRGVPEHLVKSIT 108
Query: 407 TGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL---F 463
+ ++F ++ + H ++K NIL+ ++ + + G+++ L
Sbjct: 109 WQTLQAVNFCHKHN-----CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163
Query: 464 SSNGYTAPEKTVSEQG-----DVFSFGVILLELLTG-------------KTVEKTGIDL- 504
++ Y +PE V + DV++ G + ELL+G + KT DL
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLI 223
Query: 505 PKWVKAMVREEWTG--EVFDKEVAKAGR----QWAFPLLNVALKCVSNSPDDRPTMAEVL 558
P+ + ++ ++ D E + ++P L + C+ P +R T ++L
Sbjct: 224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
Query: 559 -----ERIEEVVNGNDERDRDHSNSSFS 581
E I E+ + E D+ N F
Sbjct: 284 HHPYFENIREIEDLAKEHDKPAENLYFQ 311
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 149
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IAKG++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 150 QIAKGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 248
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 35/205 (17%)
Query: 315 SSLFMVR----LKNSAVYAVKRLKKLQV----SMDEFSQTMRQI-GNLKHPNILPLVCYN 365
+F+VR +YA+K LKK + E ++T RQ+ +++ L + Y
Sbjct: 68 GKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYA 127
Query: 366 STNEEKL-LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATG-IAKGLDFMYQKSNEE 423
E KL L+ Y + G L + L +R+ + + I G I L+ +++
Sbjct: 128 FQTETKLHLILDYINGGELFTHLS-----QRERFTEHEVQIYVGEIVLALEHLHKLG--- 179
Query: 424 KTIPHGNLKLSNILLNENEDPLISECGYSK-FLDPKKTCLFSSNG---YTAPEKTVSEQG 479
I + ++KL NILL+ N ++++ G SK F+ + + G Y AP+ + G
Sbjct: 180 --IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD--IVRGG 235
Query: 480 DV--------FSFGVILLELLTGKT 496
D +S GV++ ELLTG +
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGAS 260
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 96/264 (36%), Gaps = 43/264 (16%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ--IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSL 386
AVK L ++ DE M I H NI+ + + + + ++ + + G L S
Sbjct: 105 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 164
Query: 387 LEAYIEGKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
L + P L L +A IA G ++ EE H ++ N LL
Sbjct: 165 LRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL-----EENHFIHRDIAARNCLLTCPG 218
Query: 443 DPLISECG--------YSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDVFSFGVILLE 490
+++ G Y K C + PE + + + D +SFGV+L E
Sbjct: 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 278
Query: 491 LLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQ-----WAFPLLNVALKCVS 545
+ + + M + + + V GR P+ + +C
Sbjct: 279 IFS--------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 324
Query: 546 NSPDDRPTMAEVLERIEEVVNGND 569
+ P+DRP A +LERIE D
Sbjct: 325 HQPEDRPNFAIILERIEYCTQDPD 348
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK Q V +E + + + + HPNI+ L + +L+ + S
Sbjct: 40 YAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSG 99
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + S I G+++++ K I H +LK NI+L +
Sbjct: 100 GELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKK-----IAHFDLKPENIMLLD 150
Query: 441 NEDPL----ISECGYSKFLDP--KKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P+ + + G + ++ + +F + + APE E + D++S GVI
Sbjct: 151 KNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 491 LLTGKT 496
LL+G +
Sbjct: 211 LLSGAS 216
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L+HP ++ L + E +++Y++ S G L E + + + KG
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGG---ELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLN---ENEDPLISECGYSKFLDPKKTCLFSSNG-- 467
L M+ E H +LK NI+ NE LI + G + LDPK++ ++
Sbjct: 268 LCHMH-----ENNYVHLDLKPENIMFTTKRSNELKLI-DFGLTAHLDPKQSVKVTTGTAE 321
Query: 468 YTAPE----KTVSEQGDVFSFGVILLELLTG 494
+ APE K V D++S GV+ LL+G
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTC------L 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP
Sbjct: 137 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTC------L 462
I +GL +++ + + H +LK SN+LLN D I + G ++ DP
Sbjct: 138 ILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
++ Y APE ++ +G D++S G IL E+L+ + +
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 346 TMRQIGNLK----HPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKL 401
T++++ L+ HPNI+ L TN LV+ G L Y+ K K
Sbjct: 57 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD----YLTEKVTLSEKE 112
Query: 402 RLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP---- 457
I + + + +++ + I H +LK NILL+++ + +++ G+S LDP
Sbjct: 113 TRKIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL 167
Query: 458 KKTCLFSSNGYTAPE----------KTVSEQGDVFSFGVILLELLTG 494
++ C + Y APE ++ D++S GVI+ LL G
Sbjct: 168 REVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEK---LLVYKYQSNGSLLS 385
AVK +K + F + L+H N++ L+ EEK +V +Y + GSL+
Sbjct: 39 AVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLL--GVIVEEKGGLYIVTEYMAKGSLVD 95
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L + G+ L + + + ++++ E H +L N+L++E+
Sbjct: 96 YLRS--RGRSVLGGDCLLKFSLDVCEAMEYL-----EGNNFVHRDLAARNVLVSEDNVAK 148
Query: 446 ISECGYSKFLDPKKTCLFSSNGYTAPEK----TVSEQGDVFSFGVILLELLT 493
+S+ G +K + +TAPE S + DV+SFG++L E+ +
Sbjct: 149 VSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 328 YAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLL 387
+AVK + K + E + + + G +HPNI+ L + +V + G LL
Sbjct: 50 FAVKIIDKSKRDPTEEIEILLRYG--QHPNIITLKDVYDDGKYVYVVTELXKGGELLD-- 105
Query: 388 EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNIL-LNENEDP-- 444
I ++ F + ++ I K +++++ + + H +LK SNIL ++E+ +P
Sbjct: 106 --KILRQKFFSEREASAVLFTITKTVEYLHAQG-----VVHRDLKPSNILYVDESGNPES 158
Query: 445 -LISECGYSKFLDPKKTCL----FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTG 494
I + G++K L + L +++N + APE + QG D++S GV+L LTG
Sbjct: 159 IRICDFGFAKQLRAENGLLXTPCYTAN-FVAPE-VLERQGYDAACDIWSLGVLLYTXLTG 216
Query: 495 KTVEKTGID 503
T G D
Sbjct: 217 YTPFANGPD 225
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 353 LKHPNILPLVCYNSTNEEK----LLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATG 408
L+H NIL + + T+ L+ Y GSL L+ ++ LSIA+G
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL-RIVLSIASG 117
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKF-------LDPKKTC 461
+A L + + I H +LK NIL+ +N I++ G + LD
Sbjct: 118 LAH-LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 462 LFSSNGYTAPE---KTVS-------EQGDVFSFGVILLEL 491
+ Y APE +T+ ++ D+++FG++L E+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 353 LKHPNILPLVCYNSTNEEK----LLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATG 408
L+H NIL + + T+ L+ Y GSL L+ ++ LSIA+G
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL-RIVLSIASG 117
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKF-------LDPKKTC 461
+A L + + I H +LK NIL+ +N I++ G + LD
Sbjct: 118 LAH-LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 462 LFSSNGYTAPE---KTVS-------EQGDVFSFGVILLEL 491
+ Y APE +T+ ++ D+++FG++L E+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 106/263 (40%), Gaps = 44/263 (16%)
Query: 326 AVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPL--VCYNSTNE---EKLLVYKYQSN 380
AV +K Q ++EF + + HPN++ L VC +++ + +++ +
Sbjct: 66 AVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKY 125
Query: 381 GSLLS-LLEAYIE-GKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL 438
G L + LL + +E G + P + L IA G++++ SN + H +L N +L
Sbjct: 126 GDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SN--RNFLHRDLAARNCML 180
Query: 439 NENEDPLISECGYSKFLDPKKTCLFSSNGY----------------TAPEKTVSEQGDVF 482
++ +++ G SK ++S + Y + ++ + + DV+
Sbjct: 181 RDDMTVCVADFGLSK-------KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVW 233
Query: 483 SFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALK 542
+FGV + E+ T G+ E + K L +
Sbjct: 234 AFGVTMWEIATRGMTPYPGVQ---------NHEMYDYLLHGHRLKQPEDCLDELYEIMYS 284
Query: 543 CVSNSPDDRPTMAEVLERIEEVV 565
C P DRPT + + ++E+++
Sbjct: 285 CWRTDPLDRPTFSVLRLQLEKLL 307
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 411 KGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTA 470
KGL +++ I H +LK N+ +NE+ + I + G ++ D + + Y A
Sbjct: 139 KGLRYIHAAG-----IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRA 193
Query: 471 PEKTV-----SEQGDVFSFGVILLELLTGKTVEK 499
PE + ++ D++S G I+ E++TGKT+ K
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK 227
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 14/150 (9%)
Query: 350 IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGI 409
+ L HPN++ + E +V + G L +++ + + KR P + +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 410 AKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG-- 467
L+ M+ + + H ++K +N+ + + + G +F K T S G
Sbjct: 146 CSALEHMHSRR-----VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTP 200
Query: 468 -YTAPEKTVSEQG-----DVFSFGVILLEL 491
Y +PE+ + E G D++S G +L E+
Sbjct: 201 YYMSPER-IHENGYNFKSDIWSLGCLLYEM 229
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 353 LKHPNILPLVCYNSTNEEK----LLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATG 408
L+H NIL + + T+ L+ Y GSL L+ ++ LSIA+G
Sbjct: 88 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL-RIVLSIASG 146
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKF-------LDPKKTC 461
+A L + + I H +LK NIL+ +N I++ G + LD
Sbjct: 147 LAH-LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 205
Query: 462 LFSSNGYTAPE---KTVS-------EQGDVFSFGVILLEL 491
+ Y APE +T+ ++ D+++FG++L E+
Sbjct: 206 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 291 NEKERFKLDDLLEATADLRSQTICS---SLFMVRLKNSAVYAVKRLKK--LQVSMDEFSQ 345
++K K D+LL A +L S ++ +R K V A+K LK+ + +E +
Sbjct: 1 DKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTEEMMR 59
Query: 346 TMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRD-FPWKLRLS 404
+ + L +P I+ L+ E +LV + G L ++ GKR+ P
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPL----HKFLVGKREEIPVSNVAE 114
Query: 405 IATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFS 464
+ ++ G+ ++ EEK H +L N+LL IS+ G SK L + +
Sbjct: 115 LLHQVSMGMKYL-----EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 169
Query: 465 SNG------YTAPE----KTVSEQGDVFSFGVILLELLT 493
+ + APE + S + DV+S+GV + E L+
Sbjct: 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 373 LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT---GIAKGLDFMYQKSNEEKTIPHG 429
++ +Y GS L LLE G D IAT I KGLD+++ EK I H
Sbjct: 82 IIMEYLGGGSALDLLEP---GPLD-----ETQIATILREILKGLDYLHS----EKKI-HR 128
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTAPE----KTVSEQGDVF 482
++K +N+LL+E+ + +++ G + L K+ + + APE + D++
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 188
Query: 483 SFGVILLELLTGK 495
S G+ +EL G+
Sbjct: 189 SLGITAIELARGE 201
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 343 FSQTMRQIGNLKHPNILPLVCYNSTNEEK------LLVYKYQSNGSLLSLLEAYIEGKRD 396
F + + L HP I+ Y++ E +V +Y +L ++ + EG
Sbjct: 59 FRREAQNAAALNHPAIV--AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGP-- 112
Query: 397 FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLD 456
K + + + L+F +Q I H ++K +NI+++ + + G ++ +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Query: 457 ------PKKTCLFSSNGYTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPK 506
+ + + Y +PE+ +V + DV+S G +L E+LTG+ TG D P
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP-PFTG-DSPD 225
Query: 507 WVK-AMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDR-PTMAEVLERIEEV 564
V VRE+ E A L V LK ++ +P++R T AE+ + V
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSAD------LDAVVLKALAKNPENRYQTAAEMRADLVRV 279
Query: 565 VNG 567
NG
Sbjct: 280 HNG 282
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 302 LEATADLRSQTICSSLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILP 360
LE ++ S T C ++ +R + + V AVK++++ + +E + + + + + P
Sbjct: 27 LENLGEMGSGT-CGQVWKMRFRKTGHVIAVKQMRR-SGNKEENKRILMDLDVVLKSHDCP 84
Query: 361 LV--CYNS--TNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFM 416
+ C+ + TN + + + G+ L+ ++G P ++ + I K L ++
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGP--IPERILGKMTVAIVKALYYL 140
Query: 417 YQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNGYTAPEKT 474
+K + H ++K SNILL+E + + G S L D K Y APE+
Sbjct: 141 KEKHG----VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 475 ---------VSEQGDVFSFGVILLELLTGK 495
+ DV+S G+ L+EL TG+
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 343 FSQTMRQIGNLKHPNILPLVCYNSTNEEK------LLVYKYQSNGSLLSLLEAYIEGKRD 396
F + + L HP I+ Y++ E +V +Y +L ++ + EG
Sbjct: 59 FRREAQNAAALNHPAIV--AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGP-- 112
Query: 397 FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLD 456
K + + + L+F +Q I H ++K +NIL++ + + G ++ +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANILISATNAVKVVDFGIARAIA 167
Query: 457 ------PKKTCLFSSNGYTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPK 506
+ + + Y +PE+ +V + DV+S G +L E+LTG+ TG D P
Sbjct: 168 DSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP-PFTG-DSPV 225
Query: 507 WVK-AMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDR-PTMAEVLERIEEV 564
V VRE+ E A L V LK ++ +P++R T AE+ + V
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSAD------LDAVVLKALAKNPENRYQTAAEMRADLVRV 279
Query: 565 VNG 567
NG
Sbjct: 280 HNG 282
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 373 LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT---GIAKGLDFMYQKSNEEKTIPHG 429
++ +Y GS L LLE G D IAT I KGLD+++ EK I H
Sbjct: 97 IIMEYLGGGSALDLLEP---GPLD-----ETQIATILREILKGLDYLHS----EKKI-HR 143
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTAPE----KTVSEQGDVF 482
++K +N+LL+E+ + +++ G + L K+ + + APE + D++
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIW 203
Query: 483 SFGVILLELLTGK 495
S G+ +EL G+
Sbjct: 204 SLGITAIELARGE 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 33/236 (13%)
Query: 337 QVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS-LLEAYIEGKR 395
QV M++ + + +L HPNI+ + +V + G LL ++ A GK
Sbjct: 61 QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK- 119
Query: 396 DFPWKLRLSIATGIAKGLDFMYQKSN-----EEKTIPHGNLKLSNILLNEN--EDPL-IS 447
+++ G L M Q N + + H +LK NIL + P+ I
Sbjct: 120 --------ALSEGYVAEL--MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKII 169
Query: 448 ECGYSKFL--DPKKTCLFSSNGYTAPE---KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ G ++ D T + Y APE + V+ + D++S GV++ LLTG + TG
Sbjct: 170 DFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTG-CLPFTGT 228
Query: 503 DLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVL 558
L + V+++ T + + A R +++ + ++ P+ RP+ A+VL
Sbjct: 229 SLEE-----VQQKATYK--EPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 12/159 (7%)
Query: 342 EFSQTMRQIGNLKHPNILPLV--CYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW 399
+F++ ++ HPN+LP++ C + L+ + GSL ++L D
Sbjct: 53 DFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQ 112
Query: 400 KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFLDPK 458
++ ++ A+G F++ E IP L ++ ++E+ IS F P
Sbjct: 113 AVKFAL--DXARGXAFLH---TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPG 167
Query: 459 KTCLFSSNGYTA----PEKTVSEQGDVFSFGVILLELLT 493
+ + A PE T D +SF V+L EL+T
Sbjct: 168 RXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/318 (18%), Positives = 126/318 (39%), Gaps = 54/318 (16%)
Query: 291 NEKERFKLDDLLEAT---ADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTM 347
NEK F ++L A + + ++ F + +++ + ++ K DE M
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 348 RQIGNL----KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPW---- 399
++ + +H NI+ L+ + L++ +Y G LL+ L ++ +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 400 --------KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGY 451
+ L ++ +A+G+ F+ K H ++ N+LL I + G
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFL-----ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 212
Query: 452 SKFLDPKKTCLFSSNG-----YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGI 502
++ + + N + APE + Q DV+S+G++L E+ + +
Sbjct: 213 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS--------L 264
Query: 503 DLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSPDDRPTMAE 556
L + +V ++ ++ K G Q A P + ++ C + P RPT +
Sbjct: 265 GLNPYPGILVNSKFY------KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQ 318
Query: 557 VLERIEEVVNGNDERDRD 574
+ ++E D R+RD
Sbjct: 319 ICSFLQEQAQ-EDRRERD 335
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 316 SLFMVRLKNSA-VYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEE 370
++++ R K S + A+K L K Q+ + +R+ +L HPNIL L Y
Sbjct: 38 NVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRR 97
Query: 371 KLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L+ +Y G L L+ F + +I +A L + + K + H +
Sbjct: 98 IYLILEYAPRGELYKELQKSC----TFDEQRTATIMEELADALMYCHGKK-----VIHRD 148
Query: 431 LKLSNILLNENEDPLISECGYSKFLDP-KKTCLFSSNGYTAPE----KTVSEQGDVFSFG 485
+K N+LL + I++ G+S ++ + + Y PE + +E+ D++ G
Sbjct: 149 IKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIG 208
Query: 486 VILLELLTG 494
V+ ELL G
Sbjct: 209 VLCYELLVG 217
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 323 KNSAVYAVKRLKKLQVSM-DEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNG 381
++ + AVK LK+ S +F + + L+H +I+ + L+V++Y +G
Sbjct: 40 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 382 SLLSLLEAY------IEGKRDF---PWKLR--LSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L L ++ + G D P L L++A+ +A G+ ++ H +
Sbjct: 100 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-----AGLHFVHRD 154
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTA-------PE----KTVSEQG 479
L N L+ + I + G S+ D T + G T PE + + +
Sbjct: 155 LATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 212
Query: 480 DVFSFGVILLELLT 493
DV+SFGV+L E+ T
Sbjct: 213 DVWSFGVVLWEIFT 226
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 32/202 (15%)
Query: 310 SQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLK----HPNILPLVCYN 365
S +IC V K++ +AVK + K M+ + T ++I LK HPNI+ L
Sbjct: 23 SFSICRKC--VHKKSNQAFAVKIISK---RME--ANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 366 STNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKT 425
LV + + G L I+ K+ F I + + M+ +
Sbjct: 76 HDQLHTFLVMELLNGGELFE----RIKKKKHFSETEASYIMRKLVSAVSHMH-----DVG 126
Query: 426 IPHGNLKLSNILLNENEDPL---ISECGYSKFLDPK----KTCLFSSNGYTAPE----KT 474
+ H +LK N+L + D L I + G+++ P KT F+ + Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH-YAAPELLNQNG 185
Query: 475 VSEQGDVFSFGVILLELLTGKT 496
E D++S GVIL +L+G+
Sbjct: 186 YDESCDLWSLGVILYTMLSGQV 207
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 350 IGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT 407
+ ++ +P++ L +C ST + L+ + G LL + E K + + L+
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCV 121
Query: 408 GIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNG 467
IA+G++++ E++ + H +L N+L+ + I++ G +K L ++ + G
Sbjct: 122 QIAEGMNYL-----EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 468 -----YTAPE----KTVSEQGDVFSFGVILLELLTGKTVEKTGI 502
+ A E + + Q DV+S+GV + EL+T + GI
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 220
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 354 KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGL 413
K+PNI+ + +E +V +Y + GSL ++ + R + + L
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QAL 130
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTA 470
+F++ SN+ + H N+K NILL + +++ G+ + P K++ + + + A
Sbjct: 131 EFLH--SNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 185
Query: 471 PE----KTVSEQGDVFSFGVILLELLTGK 495
PE K + D++S G++ +E++ G+
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 323 KNSAVYAVKRLKKLQVSM-DEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNG 381
++ + AVK LK+ S +F + + L+H +I+ + L+V++Y +G
Sbjct: 46 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 382 SLLSLLEAY------IEGKRDF---PWKLR--LSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L L ++ + G D P L L++A+ +A G+ ++ H +
Sbjct: 106 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-----AGLHFVHRD 160
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTA-------PE----KTVSEQG 479
L N L+ + I + G S+ D T + G T PE + + +
Sbjct: 161 LATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 218
Query: 480 DVFSFGVILLELLT 493
DV+SFGV+L E+ T
Sbjct: 219 DVWSFGVVLWEIFT 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 39/200 (19%)
Query: 373 LVYKYQSNGSLLSLL------EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTI 426
++ +Y GS L LL E YI +I I KGLD+++ E+ I
Sbjct: 94 IIMEYLGGGSALDLLKPGPLEETYIA-----------TILREILKGLDYLHS----ERKI 138
Query: 427 PHGNLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTAPE----KTVSEQG 479
H ++K +N+LL+E D +++ G + L K+ + + APE +
Sbjct: 139 -HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 480 DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNV 539
D++S G+ +EL G E DL + + + + + +K P
Sbjct: 198 DIWSLGITAIELAKG---EPPNSDLHPMRVLFLIPKNSPPTLEGQHSK-------PFKEF 247
Query: 540 ALKCVSNSPDDRPTMAEVLE 559
C++ P RPT E+L+
Sbjct: 248 VEACLNKDPRFRPTAKELLK 267
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 373 LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT---GIAKGLDFMYQKSNEEKTIPHG 429
++ +Y GS L LLE G D IAT I KGLD+++ EK I H
Sbjct: 82 IIMEYLGGGSALDLLEP---GPLD-----ETQIATILREILKGLDYLHS----EKKI-HR 128
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTAPE----KTVSEQGDVF 482
++K +N+LL+E+ + +++ G + L K+ + + APE + D++
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIW 188
Query: 483 SFGVILLELLTGK 495
S G+ +EL G+
Sbjct: 189 SLGITAIELARGE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 373 LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIAT---GIAKGLDFMYQKSNEEKTIPHG 429
++ +Y GS L LLE G D IAT I KGLD+++ EK I H
Sbjct: 102 IIMEYLGGGSALDLLEP---GPLD-----ETQIATILREILKGLDYLHS----EKKI-HR 148
Query: 430 NLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTAPE----KTVSEQGDVF 482
++K +N+LL+E+ + +++ G + L K+ + + APE + D++
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 208
Query: 483 SFGVILLELLTGK 495
S G+ +EL G+
Sbjct: 209 SLGITAIELARGE 221
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 323 KNSAVYAVKRLKKLQVSM-DEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNG 381
++ + AVK LK+ S +F + + L+H +I+ + L+V++Y +G
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 382 SLLSLLEAY------IEGKRDF---PWKLR--LSIATGIAKGLDFMYQKSNEEKTIPHGN 430
L L ++ + G D P L L++A+ +A G+ ++ H +
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-----AGLHFVHRD 183
Query: 431 LKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYT-------APE----KTVSEQG 479
L N L+ + I + G S+ D T + G T PE + + +
Sbjct: 184 LATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 241
Query: 480 DVFSFGVILLELLT 493
DV+SFGV+L E+ T
Sbjct: 242 DVWSFGVVLWEIFT 255
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 343 FSQTMRQIGNLKHPNILPLVCYNSTNEEK------LLVYKYQSNGSLLSLLEAYIEGKRD 396
F + + L HP I+ Y++ E +V +Y +L ++ + EG
Sbjct: 59 FRREAQNAAALNHPAIV--AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGP-- 112
Query: 397 FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLD 456
K + + + L+F +Q I H ++K +NI+++ + + G ++ +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Query: 457 ------PKKTCLFSSNGYTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPK 506
+ + + Y +PE+ +V + DV+S G +L E+LTG+ TG D P
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP-PFTG-DSPV 225
Query: 507 WVK-AMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDR-PTMAEVLERIEEV 564
V VRE+ E A L V LK ++ +P++R T AE+ + V
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSAD------LDAVVLKALAKNPENRYQTAAEMRADLVRV 279
Query: 565 VNG 567
NG
Sbjct: 280 HNG 282
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 46/260 (17%)
Query: 346 TMRQIG---NLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLR 402
MR+I L+H N++ L+ + LV+++ + ++L LE + G +++
Sbjct: 71 AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNG---LDYQVV 126
Query: 403 LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL 462
I G+ F + + I H ++K NIL++++ + + G+++ L
Sbjct: 127 QKYLFQIINGIGFCHSHN-----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY 181
Query: 463 ---FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTVEKTGIDLPKWVKAMV-- 512
++ Y APE V + DV++ G ++ E+ G+ + D+ + M+
Sbjct: 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCL 241
Query: 513 -----REEWTGEVFDKEVAKAGRQWA-----------FP-----LLNVALKCVSNSPDDR 551
R + E+F+K AG + +P ++++A KC+ PD R
Sbjct: 242 GNLIPRHQ---ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKR 298
Query: 552 PTMAEVLERIEEVVNGNDER 571
P AE+L ++G ER
Sbjct: 299 PFCAELLHHDFFQMDGFAER 318
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 343 FSQTMRQIGNLKHPNILPLVCYNSTNEEK------LLVYKYQSNGSLLSLLEAYIEGKRD 396
F + + L HP I+ Y++ E +V +Y +L ++ + EG
Sbjct: 76 FRREAQNAAALNHPAIV--AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGP-- 129
Query: 397 FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLD 456
K + + + L+F +Q I H ++K +NI+++ + + G ++ +
Sbjct: 130 MTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANIMISATNAVKVMDFGIARAIA 184
Query: 457 ------PKKTCLFSSNGYTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPK 506
+ + + Y +PE+ +V + DV+S G +L E+LTG+ TG D P
Sbjct: 185 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP-PFTG-DSPV 242
Query: 507 WVK-AMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDR-PTMAEVLERIEEV 564
V VRE+ E A L V LK ++ +P++R T AE+ + V
Sbjct: 243 SVAYQHVREDPIPPSARHEGLSAD------LDAVVLKALAKNPENRYQTAAEMRADLVRV 296
Query: 565 VNG 567
NG
Sbjct: 297 HNG 299
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 343 FSQTMRQIGNLKHPNILPLVCYNSTNEEK------LLVYKYQSNGSLLSLLEAYIEGKRD 396
F + + L HP I+ Y++ E +V +Y +L ++ + EG
Sbjct: 59 FRREAQNAAALNHPAIV--AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGP-- 112
Query: 397 FPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLD 456
K + + + L+F +Q I H ++K +NI+++ + + G ++ +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Query: 457 ------PKKTCLFSSNGYTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPK 506
+ + + Y +PE+ +V + DV+S G +L E+LTG+ TG D P
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP-PFTG-DSPV 225
Query: 507 WVK-AMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDR-PTMAEVLERIEEV 564
V VRE+ E A L V LK ++ +P++R T AE+ + V
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSAD------LDAVVLKALAKNPENRYQTAAEMRADLVRV 279
Query: 565 VNG 567
NG
Sbjct: 280 HNG 282
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 43/200 (21%)
Query: 328 YAVKRLK--KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS 385
YA+KR++ +++ ++ + ++ + L+HP I V Y + EK K Q + +
Sbjct: 33 YAIKRIRLPNRELAREKVMREVKALAKLEHPGI---VRYFNAWLEKNTTEKLQPSSPKVY 89
Query: 386 L-----------LEAYIEGKRDFPWKLR---LSIATGIAKGLDFMYQKSNEEKTIPHGNL 431
L L+ ++ G+ + R L I IA+ ++F++ K + H +L
Sbjct: 90 LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-----LMHRDL 144
Query: 432 KLSNILLNENEDPLISECGYSKFLD---------------PKKTCLFSSNGYTAPEK--- 473
K SNI ++ + + G +D + T + Y +PE+
Sbjct: 145 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG 204
Query: 474 -TVSEQGDVFSFGVILLELL 492
+ S + D+FS G+IL ELL
Sbjct: 205 NSYSHKVDIFSLGLILFELL 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 43/246 (17%)
Query: 343 FSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGK--RDF--- 397
F + + L HP I V +T E + G L ++ Y++G RD
Sbjct: 59 FRREAQNAAALNHPAI---VAVYATGEAE------TPAGPLPYIVMEYVDGVTLRDIVHT 109
Query: 398 --PW--KLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK 453
P K + + + L+F +Q I H ++K +NI+++ + + G ++
Sbjct: 110 EGPMTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANIMISATNAVKVMDFGIAR 164
Query: 454 FLD------PKKTCLFSSNGYTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGID 503
+ + + + Y +PE+ +V + DV+S G +L E+LTG+ TG D
Sbjct: 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP-PFTG-D 222
Query: 504 LPKWVK-AMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDR-PTMAEVLERI 561
P V VRE+ E A L V LK ++ +P++R T AE+ +
Sbjct: 223 SPVSVAYQHVREDPIPPSARHEGLSAD------LDAVVLKALAKNPENRYQTAAEMRADL 276
Query: 562 EEVVNG 567
V NG
Sbjct: 277 VRVHNG 282
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS +E + + + ++HPNI+ L + +L+ + S
Sbjct: 33 YAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 92
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K I G+ +++ K I H +LK NI+L +
Sbjct: 93 GELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR-----IAHFDLKPENIMLLD 143
Query: 441 NEDP----LISECGYSKFLDPKKTC--LFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P + + G + ++ +F + + APE E + D++S GVI
Sbjct: 144 KNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 203
Query: 491 LLTGKT 496
LL+G +
Sbjct: 204 LLSGAS 209
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 124/314 (39%), Gaps = 60/314 (19%)
Query: 291 NEKERFKLDDLLEAT---ADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTM 347
NEK F ++L A + + ++ F + +++ + ++ K DE M
Sbjct: 23 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 82
Query: 348 RQIGNL----KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEG---------- 393
++ + +H NI+ L+ + L++ +Y G LL+ L E
Sbjct: 83 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 394 ------KRDF-PWKLR--LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDP 444
K D P +LR L ++ +A+G+ F+ K H ++ N+LL
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL-----ASKNCIHRDVAARNVLLTNGHVA 197
Query: 445 LISECGYSKFLDPKKTCLFSSNG-----YTAPEK----TVSEQGDVFSFGVILLELLTGK 495
I + G ++ + + N + APE + Q DV+S+G++L E+ +
Sbjct: 198 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-- 255
Query: 496 TVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFP------LLNVALKCVSNSPD 549
+ L + +V ++ ++ K G Q A P + ++ C + P
Sbjct: 256 ------LGLNPYPGILVNSKFY------KLVKDGYQMAQPAFAPKNIYSIMQACWALEPT 303
Query: 550 DRPTMAEVLERIEE 563
RPT ++ ++E
Sbjct: 304 HRPTFQQICSFLQE 317
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS +E + + + ++HPNI+ L + +L+ + S
Sbjct: 40 YAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 99
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K I G+ +++ K I H +LK NI+L +
Sbjct: 100 GELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR-----IAHFDLKPENIMLLD 150
Query: 441 NEDP----LISECGYSKFLDPKKTC--LFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P + + G + ++ +F + + APE E + D++S GVI
Sbjct: 151 KNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 491 LLTGKT 496
LL+G +
Sbjct: 211 LLSGAS 216
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 409 IAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGY 468
IAKG+ ++ E+ + H +L N+L+ I++ G ++ LD +T + ++G
Sbjct: 128 IAKGMSYL-----EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET-EYHADGG 181
Query: 469 TAPEKTV----------SEQGDVFSFGVILLELLTGKTVEKTGI 502
P K + + Q DV+S+GV + EL+T GI
Sbjct: 182 KVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGI 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 36/208 (17%)
Query: 329 AVKRLKKLQVSMDEFSQTM-RQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
AVK + K QV +++ R++ LK HPNI L + LV + + G L
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL---NEN 441
+ I KR F I + G+ + ++ I H +LK N+LL +++
Sbjct: 115 DEI---ISRKR-FSEVDAARIIRQVLSGITYXHKNK-----IVHRDLKPENLLLESKSKD 165
Query: 442 EDPLISECGYSKFLDPKKTCL--FSSNGYTAPE---KTVSEQGDVFSFGVILLELLTG-- 494
+ I + G S + K + Y APE T E+ DV+S GVIL LL+G
Sbjct: 166 ANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCP 225
Query: 495 -----------KTVEKTG--IDLPKWVK 509
K VEK +LP+W K
Sbjct: 226 PFNGANEYDILKKVEKGKYTFELPQWKK 253
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 45/216 (20%)
Query: 341 DEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLL--------EAYIE 392
+EF L+HPN++ L+ + ++ +++ Y S+G L L +
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 393 GKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
R L + + IA G++++ + H +L N+L+ + + IS+
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYL-----SSHHVVHKDLATRNVLVYDKLNVKISD 188
Query: 449 CGYSKFLDPKKTCLFSSNG-----YTAPEKTV----SEQGDVFSFGVIL----------- 488
G + + N + APE + S D++S+GV+L
Sbjct: 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
Query: 489 --------LELLTGKTVEKTGIDLPKWVKAMVREEW 516
+E++ + V D P WV A++ E W
Sbjct: 249 CGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECW 284
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 288 FFVNEKERFKLDDLLEATADLRSQTICSSLFMVRLKNSA-VYAVKRLKKL---QVSMDEF 343
++++ R L D E ++L + S ++ + K + YA+K LKK ++ E
Sbjct: 41 YWIDGSNRDALSDFFEVESEL-GRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEI 99
Query: 344 SQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLS-LLEAYIEGKRDFPWKLR 402
+R L HPNI+ L T E LV + + G L ++E +RD
Sbjct: 100 GVLLR----LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERD-----A 150
Query: 403 LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLN--ENEDPL-ISECGYSKFLDP-- 457
I + + +++ E I H +LK N+L + PL I++ G SK ++
Sbjct: 151 ADAVKQILEAVAYLH-----ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205
Query: 458 --KKTCLFSSNGYTAPEK----TVSEQGDVFSFGVILLELLTG 494
K C + GY APE + D++S G+I LL G
Sbjct: 206 LMKTVC--GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS +E + + + ++HPNI+ L + +L+ + S
Sbjct: 54 YAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 113
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K I G+ +++ K I H +LK NI+L +
Sbjct: 114 GELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR-----IAHFDLKPENIMLLD 164
Query: 441 NEDP----LISECGYSKFLDPKKTC--LFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P + + G + ++ +F + + APE E + D++S GVI
Sbjct: 165 KNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 224
Query: 491 LLTGKT 496
LL+G +
Sbjct: 225 LLSGAS 230
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 354 KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGL 413
K+PNI+ + +E +V +Y + GSL ++ + R + + L
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QAL 129
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTA 470
+F++ SN+ + H ++K NILL + +++ G+ + P K++ + + + A
Sbjct: 130 EFLH--SNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 184
Query: 471 PE----KTVSEQGDVFSFGVILLELLTGK 495
PE K + D++S G++ +E++ G+
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 45/216 (20%)
Query: 341 DEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLL--------EAYIE 392
+EF L+HPN++ L+ + ++ +++ Y S+G L L +
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 393 GKRDFPWKLR----LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISE 448
R L + + IA G++++ + H +L N+L+ + + IS+
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYL-----SSHHVVHKDLATRNVLVYDKLNVKISD 171
Query: 449 CGYSKFLDPKKTCLFSSNG-----YTAPEKTV----SEQGDVFSFGVIL----------- 488
G + + N + APE + S D++S+GV+L
Sbjct: 172 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
Query: 489 --------LELLTGKTVEKTGIDLPKWVKAMVREEW 516
+E++ + V D P WV A++ E W
Sbjct: 232 CGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECW 267
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 41/199 (20%)
Query: 335 KLQVSMDEFSQTMR-QIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEG 393
K+ ++D + + R +I L+H N NST ++ ++ +G + + E
Sbjct: 46 KIVKNVDRYCEAARSEIQVLEHLNTTDP---NSTFRCVQMLEWFEHHGHICIVFELLGLS 102
Query: 394 KRDF-------PWKLR--LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE---- 440
DF P++L +A I K ++F++ SN+ + H +LK NIL +
Sbjct: 103 TYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH--SNK---LTHTDLKPENILFVQSDYT 157
Query: 441 ---------------NEDPLISECGYSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDV 481
N D + + G + + D + L S+ Y APE + S+ DV
Sbjct: 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDV 217
Query: 482 FSFGVILLELLTGKTVEKT 500
+S G IL+E G TV T
Sbjct: 218 WSIGCILIEYYLGFTVFPT 236
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 354 KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGL 413
K+PNI+ + +E +V +Y + GSL ++ + R + + L
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QAL 129
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTA 470
+F++ SN+ + H ++K NILL + +++ G+ + P K++ + + + A
Sbjct: 130 EFLH--SNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 184
Query: 471 PE----KTVSEQGDVFSFGVILLELLTGK 495
PE K + D++S G++ +E++ G+
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 39/202 (19%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQIGNLK---HPNILPLVCYNSTNEEK------LLVYKYQS 379
AVK LK ++ + + +R+ +K HP++ LV + + K +++ +
Sbjct: 55 AVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMK 114
Query: 380 NGSLLSLLEAYIEGKRDF--PWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNIL 437
+G L + L A G+ F P + + IA G++++ + H +L N +
Sbjct: 115 HGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL-----SSRNFIHRDLAARNCM 169
Query: 438 LNENEDPLISECGYSKFLDP----KKTCL------------FSSNGYTAPEKTVSEQGDV 481
L E+ +++ G S+ + ++ C + N YT DV
Sbjct: 170 LAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTV-------HSDV 222
Query: 482 FSFGVILLELLTGKTVEKTGID 503
++FGV + E++T GI+
Sbjct: 223 WAFGVTMWEIMTRGQTPYAGIE 244
>pdb|3U0T|D Chain D, Fab-Antibody Complex
pdb|3U0T|B Chain B, Fab-Antibody Complex
Length = 217
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 291 NEKERFKLDDLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQI 350
N K +L D + T D + T+ L +R +++AVY L L V + +
Sbjct: 57 NTKYAPRLQDRVTMTRDTSTSTVYMELSSLRSEDTAVYYCASLYSLPVYWGQGTTVTVSS 116
Query: 351 GNLKHPNILPLV-CYNSTNEE 370
+ K P++ PL C ST+E
Sbjct: 117 ASTKGPSVFPLAPCSRSTSES 137
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 354 KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGL 413
K+PNI+ + +E +V +Y + GSL ++ + R + + L
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QAL 130
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTA 470
+F++ SN+ + H ++K NILL + +++ G+ + P K++ + + + A
Sbjct: 131 EFLH--SNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 185
Query: 471 PE----KTVSEQGDVFSFGVILLELLTGK 495
PE K + D++S G++ +E++ G+
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 23 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 82
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ S L ++A P L S + +GL F + + H +LK
Sbjct: 83 FEFLSM-DLKDFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 134
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 195 IFAEMVTRRAL 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 24 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 83
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ S L ++A P L S + +GL F + + H +LK
Sbjct: 84 FEFLSM-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPE 135
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 196 IFAEMVTRRAL 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 24 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 83
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ S L ++A P L S + +GL F + + H +LK
Sbjct: 84 FEFLSM-DLKDFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 135
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 196 IFAEMVTRRAL 206
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 74 HATNIVGIRLENMNLSGIIDAETLCKLRHLRVVSLARNLIQGRIPTSISNCRRLTYXXXX 133
+ TN+ I L N L+G I + + +L +L ++ L+ N G IP + +CR L +
Sbjct: 488 NCTNLNWISLSNNRLTGEI-PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 546
Query: 134 XXXXXGAVP 142
G +P
Sbjct: 547 TNLFNGTIP 555
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 88 LSGIIDAETLCKLRHLRVVSLARNLIQGRIPTSISNCRRLTYXXXXXXXXXGAVPXXXXX 147
LSG I E + + +L +++L N I G IP + + R L G +P
Sbjct: 644 LSGYIPKE-IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Query: 148 XXXXXXXDISNNHFAATSPD 167
D+SNN+ + P+
Sbjct: 703 LTMLTEIDLSNNNLSGPIPE 722
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 87 NLSGIIDAETLCKLRHLRVVSLARNLIQGRIPTSISN 123
N SG + +TL K+R L+V+ L+ N G +P S++N
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTN 365
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 95 ETLCKLRHLRVVSLARNLIQGRIPTSISNCRRLTYXXXXXXXXXGAVPXXXXXXXXXXXX 154
+ L ++ L + L N + G IP+ +SNC L + G +P
Sbjct: 460 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519
Query: 155 DISNNHFAATSP 166
+SNN F+ P
Sbjct: 520 KLSNNSFSGNIP 531
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 22 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 81
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ S L ++A P L S + +GL F + + H +LK
Sbjct: 82 FEFLSM-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPE 133
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 194 IFAEMVTRRAL 204
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 74 HATNIVGIRLENMNLSGIIDAETLCKLRHLRVVSLARNLIQGRIPTSISNCRRLTYXXXX 133
+ TN+ I L N L+G I + + +L +L ++ L+ N G IP + +CR L +
Sbjct: 485 NCTNLNWISLSNNRLTGEI-PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 543
Query: 134 XXXXXGAVP 142
G +P
Sbjct: 544 TNLFNGTIP 552
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 88 LSGIIDAETLCKLRHLRVVSLARNLIQGRIPTSISNCRRLTYXXXXXXXXXGAVPXXXXX 147
LSG I E + + +L +++L N I G IP + + R L G +P
Sbjct: 641 LSGYIPKE-IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 699
Query: 148 XXXXXXXDISNNHFAATSPD 167
D+SNN+ + P+
Sbjct: 700 LTMLTEIDLSNNNLSGPIPE 719
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 87 NLSGIIDAETLCKLRHLRVVSLARNLIQGRIPTSISN 123
N SG + +TL K+R L+V+ L+ N G +P S++N
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTN 362
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 95 ETLCKLRHLRVVSLARNLIQGRIPTSISNCRRLTYXXXXXXXXXGAVPXXXXXXXXXXXX 154
+ L ++ L + L N + G IP+ +SNC L + G +P
Sbjct: 457 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 516
Query: 155 DISNNHFAATSP 166
+SNN F+ P
Sbjct: 517 KLSNNSFSGNIP 528
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 347 MRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDF--PWKLRLS 404
+R + + HPNIL L EE + Y + + L I +R P ++
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY- 138
Query: 405 IATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDPKKTCL 462
I GL ++ E + H +L NILL +N D I + ++ D KT
Sbjct: 139 FMYHILLGLHVLH-----EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHY 193
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
+ Y APE + +G D++S G ++ E+ K +
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 24 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 83
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L + ++A P L S + +GL F + + H +LK
Sbjct: 84 FEFLHQ-DLKTFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 135
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 196 IFAEMVTRRAL 206
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 347 MRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDF--PWKLRLS 404
+R + + HPNIL L EE + Y + + L I +R P ++
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY- 138
Query: 405 IATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK--FLDPKKTCL 462
I GL ++ E + H +L NILL +N D I + ++ D KT
Sbjct: 139 FMYHILLGLHVLH-----EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHY 193
Query: 463 FSSNGYTAPEKTVSEQG-----DVFSFGVILLELLTGKTV 497
+ Y APE + +G D++S G ++ E+ K +
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 20 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 79
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ + L + ++A P L S + +GL F + + H +LK
Sbjct: 80 FEH-VHQDLKTFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 131
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 192 IFAEMVTRRAL 202
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 31/171 (18%)
Query: 370 EKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQK----SNEEKT 425
E LLV +Y NGSL L + W +A + +GL +++ + + +
Sbjct: 86 EYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLHTELPRGDHYKPA 140
Query: 426 IPHGNLKLSNILLNENEDPLISECGYS------KFLDP--KKTCLFSSNG---YTAPE-- 472
I H +L N+L+ + +IS+ G S + + P + S G Y APE
Sbjct: 141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL 200
Query: 473 ---------KTVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVRE 514
++ +Q D+++ G+I E+ T G +P++ A E
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTE 251
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 354 KHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGL 413
K+PNI+ + +E +V +Y + GSL ++ + R + + L
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QAL 129
Query: 414 DFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP---KKTCLFSSNGYTA 470
+F++ SN+ + H ++K NILL + +++ G+ + P K++ + + + A
Sbjct: 130 EFLH--SNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMA 184
Query: 471 PE----KTVSEQGDVFSFGVILLELLTGK 495
PE K + D++S G++ +E++ G+
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 81 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLSFCHSHR-----VLHRDLKPQ 132
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 193 IFAEMVTRRAL 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 81 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 132
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 193 IFAEMVTRRAL 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 20 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 79
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 80 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 131
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 192 IFAEMVTRRAL 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 20 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 79
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 80 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 131
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 192 IFAEMVTRRAL 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 81 FEFLHQ-DLKDFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPE 132
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 193 IFAEMVTRRAL 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 25 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 84
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 85 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 136
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 137 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 196
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 197 IFAEMVTRRAL 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 81 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 132
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 193 IFAEMVTRRAL 203
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L+HP+I+ L + +E ++V +Y N L YI + + I
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISA 125
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP----KKTCLFSSNGY 468
+++ ++ I H +LK N+LL+E+ + I++ G S + K +C S Y
Sbjct: 126 VEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNY 178
Query: 469 TAPEKTVSE-----QGDVFSFGVILLELL 492
APE + + DV+S GVIL +L
Sbjct: 179 AAPEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L+HP+I+ L + +E ++V +Y N L YI + + I
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISA 124
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP----KKTCLFSSNGY 468
+++ ++ I H +LK N+LL+E+ + I++ G S + K +C S Y
Sbjct: 125 VEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNY 177
Query: 469 TAPEKTVSE-----QGDVFSFGVILLELL 492
APE + + DV+S GVIL +L
Sbjct: 178 AAPEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 22 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 81
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 82 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 133
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 194 IFAEMVTRRAL 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 20 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 79
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 80 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 131
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 192 IFAEMVTRRAL 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 24 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 83
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 84 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 135
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 196 IFAEMVTRRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 23 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 82
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 83 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 134
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 195 IFAEMVTRRAL 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 23 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 82
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 83 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 134
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 195 IFAEMVTRRAL 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 22 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 81
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 82 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 133
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 194 IFAEMVTRRAL 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L+HP+I+ L + +E ++V +Y N L YI + + I
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISA 119
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP----KKTCLFSSNGY 468
+++ ++ I H +LK N+LL+E+ + I++ G S + K +C S Y
Sbjct: 120 VEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNY 172
Query: 469 TAPEKT-----VSEQGDVFSFGVILLELL 492
APE + DV+S GVIL +L
Sbjct: 173 AAPEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L+HP+I+ L + +E ++V +Y N L YI + + I
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISA 115
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP----KKTCLFSSNGY 468
+++ ++ I H +LK N+LL+E+ + I++ G S + K +C S Y
Sbjct: 116 VEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNY 168
Query: 469 TAPEKT-----VSEQGDVFSFGVILLELL 492
APE + DV+S GVIL +L
Sbjct: 169 AAPEVISGKLYAGPEVDVWSCGVILYVML 197
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 24 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 83
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 84 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 135
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 196 IFAEMVTRRAL 206
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 81 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 132
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 193 IFAEMVTRRAL 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 81 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 132
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 193 IFAEMVTRRAL 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 81 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 132
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 193 IFAEMVTRRAL 203
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 33/189 (17%)
Query: 324 NSAVYAVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEEKLLVYKYQS 379
A A+K +KK V+ S + + L HPNI+ L + LV +
Sbjct: 28 TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYR 87
Query: 380 NGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL- 438
G L I ++ F I + G ++++ + I H +LK N+LL
Sbjct: 88 GGELFD----EIILRQKFSEVDAAVIMKQVLSGTTYLHKHN-----IVHRDLKPENLLLE 138
Query: 439 NENEDPLISECGYSKFLDPKKTCLFSSNG----------YTAPE---KTVSEQGDVFSFG 485
+++ D LI K +D + F G Y APE K E+ DV+S G
Sbjct: 139 SKSRDALI------KIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCG 192
Query: 486 VILLELLTG 494
VIL LL G
Sbjct: 193 VILYILLCG 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 20 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 79
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 80 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 131
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 191
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 192 IFAEMVTRRAL 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 22 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 81
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 82 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 133
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 194 IFAEMVTRRAL 204
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 24 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 83
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ + L ++A P L S + +GL F + + H +LK
Sbjct: 84 FEH-VDQDLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 135
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 195
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 196 IFAEMVTRRAL 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 22 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 81
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 82 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPE 133
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 193
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 194 IFAEMVTRRAL 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 81 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 132
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 192
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 193 IFAEMVTRRAL 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 25 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 84
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 85 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 136
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 137 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 196
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 197 IFAEMVTRRAL 207
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 23 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 82
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 83 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPE 134
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 194
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 195 IFAEMVTRRAL 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 21 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 81 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 132
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGC 192
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 193 IFAEMVTRRAL 203
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 344 SQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWK 400
S +R+I LK HPNI+ L+ T + LV+++ L ++A P
Sbjct: 47 STAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA--SALTGIPLP 103
Query: 401 LRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK-FLDPKK 459
L S + +GL F + + H +LK N+L+N +++ G ++ F P +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 460 TCLFS--SNGYTAPE-----KTVSEQGDVFSFGVILLELLTGKTV 497
T + Y APE K S D++S G I E++T + +
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 343 FSQTMRQIGNLKHPNILPLV-CYNSTNEEK---LLVYKYQSNGSLLSLLEAYIEGKRDFP 398
F + + L+HPNI+ + ST + K +LV + ++G+L + L+ + K
Sbjct: 72 FKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXK---- 127
Query: 399 WKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL-ISECGYSKFLDP 457
K+ S I KGL F++ ++ I H +LK NI + + I + G +
Sbjct: 128 IKVLRSWCRQILKGLQFLHTRT---PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184
Query: 458 K-KTCLFSSNGYTAPE---KTVSEQGDVFSFGVILLELLT 493
+ + + APE + E DV++FG LE T
Sbjct: 185 SFAKAVIGTPEFXAPEXYEEKYDESVDVYAFGXCXLEXAT 224
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 344 SQTMRQIGNLK---HPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWK 400
S +R+I LK HPNI+ L+ T + LV+++ L ++A P
Sbjct: 46 STAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDA--SALTGIPLP 102
Query: 401 LRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK-FLDPKK 459
L S + +GL F + + H +LK N+L+N +++ G ++ F P +
Sbjct: 103 LIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 460 TCLFS--SNGYTAPE-----KTVSEQGDVFSFGVILLELLTGKTV 497
T + Y APE K S D++S G I E++T + +
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 33/184 (17%)
Query: 329 AVKRLKKLQVSMDEFSQTMRQ----IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLL 384
A+K +KK V+ S + + L HPNI+ L + LV + G L
Sbjct: 50 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 109
Query: 385 SLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILL-NENED 443
I ++ F I + G ++++ + I H +LK N+LL +++ D
Sbjct: 110 D----EIILRQKFSEVDAAVIMKQVLSGTTYLHKHN-----IVHRDLKPENLLLESKSRD 160
Query: 444 PLISECGYSKFLDPKKTCLFSSNG----------YTAPE---KTVSEQGDVFSFGVILLE 490
LI K +D + F G Y APE K E+ DV+S GVIL
Sbjct: 161 ALI------KIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYI 214
Query: 491 LLTG 494
LL G
Sbjct: 215 LLCG 218
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 28 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 87
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 88 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 139
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 199
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 200 IFAEMVTRRAL 210
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 321 RLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNLK---HPNILPLVCYNSTNEEKLLV 374
+ +N V LKK+++ + S +R+I LK HPNI+ L+ T + LV
Sbjct: 28 KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 87
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
+++ L ++A P L S + +GL F + + H +LK
Sbjct: 88 FEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQ 139
Query: 435 NILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-----KTVSEQGDVFSFGV 486
N+L+N +++ G ++ F P +T + Y APE K S D++S G
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGC 199
Query: 487 ILLELLTGKTV 497
I E++T + +
Sbjct: 200 IFAEMVTRRAL 210
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 35/176 (19%)
Query: 353 LKHPNILPLVCYN----STNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATG 408
++H NIL + + + + L+ Y NGSL L++ + L +A
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYS 142
Query: 409 IAKGLDFMYQK---SNEEKTIPHGNLKLSNILLNENEDPLISECGYS-KFL------DPK 458
GL ++ + + + I H +LK NIL+ +N I++ G + KF+ D
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 459 KTCLFSSNGYTAPEKTVSE-----------QGDVFSFGVILLEL----LTGKTVEK 499
+ Y PE + E D++SFG+IL E+ ++G VE+
Sbjct: 203 PNTRVGTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 41/199 (20%)
Query: 335 KLQVSMDEFSQTMR-QIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEG 393
K+ ++D + + R +I L+H N NST ++ ++ +G + + E
Sbjct: 46 KIVKNVDRYCEAARSEIQVLEHLNTTDP---NSTFRCVQMLEWFEHHGHICIVFELLGLS 102
Query: 394 KRDF-------PWKLRL--SIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE---- 440
DF P++L +A I K ++F++ SN+ + H +LK NIL +
Sbjct: 103 TYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH--SNK---LTHTDLKPENILFVQSDYT 157
Query: 441 ---------------NEDPLISECGYSKFLDPKKTCLFSSNGYTAPEKTV----SEQGDV 481
N D + + G + + D + L Y APE + S+ DV
Sbjct: 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDV 217
Query: 482 FSFGVILLELLTGKTVEKT 500
+S G IL+E G TV T
Sbjct: 218 WSIGCILIEYYLGFTVFPT 236
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 319 MVRLKNSAVYAVKRLKKLQVSMDE---FSQTMRQI---GNLKHPNILPLVCYNSTNEEKL 372
+ + KN + + LK++++ D+ S +R+I LKH NI+ L ++++
Sbjct: 18 VFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT 77
Query: 373 LVYKYQSNGSLLSLLEAYIEG-KRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNL 431
LV+++ L+ Y + D ++ S + KGL F + ++ + H +L
Sbjct: 78 LVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-----VLHRDL 127
Query: 432 KLSNILLNENEDPLISECGYSKFLDPKKTCLFS---SNGYTAPE-----KTVSEQGDVFS 483
K N+L+N N + +++ G ++ C + + Y P+ K S D++S
Sbjct: 128 KPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187
Query: 484 FGVILLELLTGKTVEKTGIDLPKWVKAMVR-------EEW 516
G I EL G D+ +K + R E+W
Sbjct: 188 AGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 31/107 (28%)
Query: 415 FMYQ-----KSNEEKTIPHGNLKLSNILLNENEDPL-ISECGYSKFLDPKKT-------- 460
FMYQ K + H +LK +N+ +N + L I + G ++ +DP +
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 461 ----------CLFSSNGYTAPEKTVSEQGDVFSFGVILLELLTGKTV 497
L S N YT K + D+++ G I E+LTGKT+
Sbjct: 185 LVTKWYRSPRLLLSPNNYT---KAI----DMWAAGCIFAEMLTGKTL 224
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 17/99 (17%)
Query: 411 KGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLF----- 463
+GL +M+ + H +LK SN+L+NEN + I + G ++ L P + F
Sbjct: 169 RGLKYMHSAQ-----VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 223
Query: 464 SSNGYTAPEKTVS-----EQGDVFSFGVILLELLTGKTV 497
++ Y APE +S + D++S G I E+L + +
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 29/184 (15%)
Query: 333 LKKLQVSMDEFSQTMRQIGNLK----HPNIL----PLVCYN--STNEEKLLVYKYQSNGS 382
+K + V+ DE + ++I LK H NI + N +++ LV ++ GS
Sbjct: 54 IKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS 113
Query: 383 LLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENE 442
+ L++ W I I +GL ++Q + H ++K N+LL EN
Sbjct: 114 VTDLIKNTKGNTLKEEWIA--YICREILRGLSHLHQHK-----VIHRDIKGQNVLLTENA 166
Query: 443 DPLISECGYSKFLD---PKKTCLFSSNGYTAPE---------KTVSEQGDVFSFGVILLE 490
+ + + G S LD ++ + + APE T + D++S G+ +E
Sbjct: 167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
Query: 491 LLTG 494
+ G
Sbjct: 227 MAEG 230
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 17/99 (17%)
Query: 411 KGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLF----- 463
+GL +M+ + H +LK SN+L+NEN + I + G ++ L P + F
Sbjct: 170 RGLKYMHSAQ-----VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 464 SSNGYTAPEKTVS-----EQGDVFSFGVILLELLTGKTV 497
++ Y APE +S + D++S G I E+L + +
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 263
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 87/206 (42%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y + G + S L + E F + ++ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 160 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLDPKKTC--LFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 38 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 97
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 98 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 148
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 208
Query: 491 LLTGKT 496
LL+G +
Sbjct: 209 LLSGAS 214
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y G + S L + E F + ++ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 160 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y G + S L + E F + ++ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 160 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLDPKKTC--LFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 38 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 97
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 98 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 148
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 208
Query: 491 LLTGKT 496
LL+G +
Sbjct: 209 LLSGAS 214
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 24/109 (22%)
Query: 403 LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDP---KK 459
L I IA+ ++F++ K + H +LK SNI ++ + + G +D ++
Sbjct: 167 LHIFIQIAEAVEFLHSKG-----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 460 TCL------------FSSNGYTAPEK----TVSEQGDVFSFGVILLELL 492
T L + Y +PE+ S + D+FS G+IL ELL
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y G + S L + E F + ++ +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 161 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPE 209
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y G + S L + E F + ++ +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS 160
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 161 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 209
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 71/184 (38%), Gaps = 37/184 (20%)
Query: 350 IGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGI 409
+ NL+H +I L T + +V +Y G L YI + + + I
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD----YIISQDRLSEEETRVVFRQI 117
Query: 410 AKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPK-------KTCL 462
+ +++ + H +LK N+L +E + + G PK +TC
Sbjct: 118 VSAVAYVHSQG-----YAHRDLKPENLLFDEYHKLKLIDFGLCA--KPKGNKDYHLQTCC 170
Query: 463 FSSNGYTAPE-----KTVSEQGDVFSFGVILLELLTG-------------KTVEKTGIDL 504
S Y APE + + DV+S G++L L+ G K + + D+
Sbjct: 171 -GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDV 229
Query: 505 PKWV 508
PKW+
Sbjct: 230 PKWL 233
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y G + S L + E F + ++ +
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 145
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 146 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPE 194
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLD--PKKTCLFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D + +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 32/220 (14%)
Query: 319 MVRLKNSAVYAVKRLKKLQVSMDE---FSQTMRQI---GNLKHPNILPLVCYNSTNEEKL 372
+ + KN + + LK++++ D+ S +R+I LKH NI+ L ++++
Sbjct: 18 VFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT 77
Query: 373 LVYKYQSNGSLLSLLEAYIEG-KRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNL 431
LV+++ L+ Y + D ++ S + KGL F + ++ + H +L
Sbjct: 78 LVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-----VLHRDL 127
Query: 432 KLSNILLNENEDPLISECGYSKFLDPKKTCLFS---SNGYTAPE-----KTVSEQGDVFS 483
K N+L+N N + ++ G ++ C + + Y P+ K S D++S
Sbjct: 128 KPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187
Query: 484 FGVILLELLTGKTVEKTGIDLPKWVKAMVR-------EEW 516
G I EL G D+ +K + R E+W
Sbjct: 188 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 91 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 145
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 101 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 155
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 109 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 163
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 164 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 95 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 149
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 150 AKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 111 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 165
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 111 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 165
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 116
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 117 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 95 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 149
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 150 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 5 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 64
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 65 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 124
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L++E +++
Sbjct: 125 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDEQGYIQVTDF 172
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 173 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2FSR|A Chain A, Crystal Structure Of The Acetyltransferase From
Agrobacterium Tumefaciens Str. C58
Length = 195
Score = 32.0 bits (71), Expect = 0.93, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 482 FSFGVILLEL-LTGKTVEKTGID----LP-KWVKAMVREEWTGEVFDKEVAKAGRQWAFP 535
F G + ++L TG+ + + GI+ P K + ++ E G + E A A R WAF
Sbjct: 83 FGHGALXIDLGETGECIGQIGINHGPLFPEKELGWLLYEGHEGRGYAAEAAVALRDWAFE 142
Query: 536 LLNVALKCVSNSPDDRPTMAEVLERI 561
LN+ SP +R + A V ERI
Sbjct: 143 TLNLPTLVSYVSPQNRKS-AAVAERI 167
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y G + S L + E F + ++ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 160 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 89 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 143
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 144 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF-----MVRLKNSAVYAVKRLKKL 336
F KE F K ++ + TA L R +TI + F + ++ YA+K L K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIKVADF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 39 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 98
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 99 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 159 FXEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 206
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 207 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y G + S L + E F + ++ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 160 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 116
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 117 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 116
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 117 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I + + G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 120 --YLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y G + S L + E F + ++ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 159
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 160 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 119 --YLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 26/186 (13%)
Query: 328 YAVKRLKKLQ-------VSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSN 380
YA K +KK + VS ++ + + + ++HPN++ L + +L+ + +
Sbjct: 39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAG 98
Query: 381 GSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
G L L K + I G+ +++ I H +LK NI+L +
Sbjct: 99 GELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLD 149
Query: 441 NEDP----LISECGYSKFLDPKKTC--LFSSNGYTAPEKTVSE----QGDVFSFGVILLE 490
P I + G + +D +F + + APE E + D++S GVI
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 491 LLTGKT 496
LL+G +
Sbjct: 210 LLSGAS 215
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF-----MVRLKNSAVYAVKRLKKL 336
F KE F K ++ + TA L R +TI + F + ++ YA+K L K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIKVADF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 300 DLLEATADLRSQTICSSLFMVRLKNSAVYAVKRLKKLQV-SMDEFSQTM---RQIGNLKH 355
D E L + + + + ++ YA+K L K +V + + T+ R + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 356 PNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA---YIEGKRDFPWKLRLSIATGIAKG 412
P ++ L N +V +Y G + S L + E F + ++ +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS 160
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPE 472
LD +Y+ +LK N+L+++ +++ G++K + + L + Y APE
Sbjct: 161 LDLIYR-----------DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 209
Query: 473 ----KTVSEQGDVFSFGVILLELLTG 494
K ++ D ++ GV++ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FXEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FXEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FAEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FXEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 23/106 (21%)
Query: 415 FMYQKSNEEKT-----IPHGNLKLSNILLNENEDPLISECGYSKFLDPKK---------- 459
F+YQ K + H +LK SN+L+N N D + + G ++ +D
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 460 ---TCLFSSNGYTAPEKTV-----SEQGDVFSFGVILLELLTGKTV 497
T ++ Y APE + S DV+S G IL EL + +
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 454 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 508
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 509 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 384 LSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENED 443
L L Y++ R K + + ++ G+ ++ EE H +L N+LL
Sbjct: 453 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-----EESNFVHRDLAARNVLLVTQHY 507
Query: 444 PLISECGYSKFLDPKKTCLFSSN------GYTAPE----KTVSEQGDVFSFGVILLELLT 493
IS+ G SK L + + + APE S + DV+SFGV++ E +
Sbjct: 508 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 116
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 117 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 13 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 72
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 73 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 132
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 133 FXEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 180
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 181 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 23/106 (21%)
Query: 415 FMYQKSNEEKT-----IPHGNLKLSNILLNENEDPLISECGYSKFLDPKK---------- 459
F+YQ K + H +LK SN+L+N N D + + G ++ +D
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 460 ---TCLFSSNGYTAPEKTV-----SEQGDVFSFGVILLELLTGKTV 497
T ++ Y APE + S DV+S G IL EL + +
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 115
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 116 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 28/203 (13%)
Query: 307 DLRSQTICSSLFMVRLKNS-AVYAVKRLKKLQVS--MDEFSQT----MRQIGNLKHPNIL 359
D + ++++ R KN+ + A+K++K S D ++T ++ + L HPNI+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 360 PLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDF--PWKLRLSIATGIAKGLDFMY 417
L+ LV+ + LE I+ P ++ + + +GL++++
Sbjct: 76 GLLDAFGHKSNISLVFDFMETD-----LEVIIKDNSLVLTPSHIKAYMLMTL-QGLEYLH 129
Query: 418 QKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSK-FLDPKKTCLFS--SNGYTAPE-- 472
Q I H +LK +N+LL+EN +++ G +K F P + + Y APE
Sbjct: 130 QH-----WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELL 184
Query: 473 ---KTVSEQGDVFSFGVILLELL 492
+ D+++ G IL ELL
Sbjct: 185 FGARMYGVGVDMWAVGCILAELL 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 116
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 117 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 116
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 117 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 116
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 117 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 117
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 118 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I + + G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 120 --YLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I + + G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 119
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 120 --YLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 117
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 118 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 117
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 118 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 119 --YLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 117
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 118 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 117
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 118 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I P + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAG 116
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+ +++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 117 VVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF-----MVRLKNSAVYAVKRLKKL 336
F KE F K ++ + TA L R +TI + F + ++ YA+K L K
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIKVADF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 119 --YLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 353 LKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKG 412
L H N++ + + L +Y S G L +E I + + G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV-- 118
Query: 413 LDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFL--DPKKTCLFSSNG--- 467
+++ I H ++K N+LL+E ++ IS+ G + + ++ L G
Sbjct: 119 --YLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 468 YTAPE-----KTVSEQGDVFSFGVILLELLTGK 495
Y APE + +E DV+S G++L +L G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 19 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 78
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 138
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 139 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 186
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 328 YAVKRLKKLQV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSL 383
YA+K L K +V + + T+ R + + P ++ L N +V +Y G +
Sbjct: 62 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 384 LSLLEA---YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
S L + E F + ++ + LD +Y+ +LK N+L+++
Sbjct: 122 FSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQ 169
Query: 441 NEDPLISECGYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
+++ G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 170 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 39 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 98
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 99 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 159 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 206
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 207 GFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 23/106 (21%)
Query: 415 FMYQKSNEEKT-----IPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTC-------- 461
F+YQ K + H +LK SN+L+N N D + + G ++ +D
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 462 -----LFSSNGYTAPEKTV-----SEQGDVFSFGVILLELLTGKTV 497
++ Y APE + S DV+S G IL EL + +
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K + YA+K L K
Sbjct: 39 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 98
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y G + S L
Sbjct: 99 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 158
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 159 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 206
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 207 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 317 LFMVRLKNSAVYAVKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKL---- 372
+F +L S A+K++ + + + Q MR + KHPN++ L + +N +K
Sbjct: 56 VFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIV---KHPNVVDLKAFFYSNGDKKDEVF 112
Query: 373 --LVYKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGN 430
LV +Y ++ Y + K+ P L + + L +++ I H +
Sbjct: 113 LNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-----ICHRD 166
Query: 431 LKLSNILLNENEDPL-ISECGYSKFL---DPKKTCLFSSNGYTAPE-----KTVSEQGDV 481
+K N+LL+ L + + G +K L +P + + S Y APE + D+
Sbjct: 167 IKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI-CSRYYRAPELIFGATNYTTNIDI 225
Query: 482 FSFGVILLELLTGKTV--EKTGID 503
+S G ++ EL+ G+ + ++GID
Sbjct: 226 WSTGCVMAELMQGQPLFPGESGID 249
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 330 VKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA 389
V +LK+++ +++E + ++Q N P ++ L N +V +Y G + S L
Sbjct: 80 VVKLKQIEHTLNE--KRIQQAVNF--PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR 135
Query: 390 ---YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLI 446
+ E F + ++ + LD +Y+ +LK N+L+++ +
Sbjct: 136 IGRFSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIKV 183
Query: 447 SECGYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
++ G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 184 ADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K + YA+K L K
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 78
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y G + S L
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 139 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 186
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K + YA+K L K
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 78
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y G + S L
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 139 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 186
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 319 MVRLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNL-KHPNILPLVCYNSTNEEKLLV 374
+ R K + Y R L+ +E F Q + L HPNI+P + E +V
Sbjct: 29 LARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 88
Query: 375 YKYQSNGSLLSLL-EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKL 433
+ + GS L+ +++G + I G+ K LD+++ H ++K
Sbjct: 89 TSFMAYGSAKDLICTHFMDGMNELAIAY---ILQGVLKALDYIHHMG-----YVHRSVKA 140
Query: 434 SNILLN 439
S+IL++
Sbjct: 141 SHILIS 146
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 328 YAVKRLKKLQV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSL 383
YA+K L K +V + + T+ R + + P ++ L N +V +Y G +
Sbjct: 62 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 121
Query: 384 LSLLEA---YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNE 440
S L + E F + ++ + LD +Y+ +LK N+L+++
Sbjct: 122 FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQ 169
Query: 441 NEDPLISECGYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
+++ G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 170 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K + YA+K L K
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQ 78
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y G + S L
Sbjct: 79 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR 138
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 139 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 186
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 187 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 104/252 (41%), Gaps = 31/252 (12%)
Query: 323 KNSAVYAVKRLK-KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNG 381
+ A+ A K ++ K + ++++ + + HP I+ L+ + + ++ ++ G
Sbjct: 34 ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGG 93
Query: 382 SLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
++ +++ +E R + + + L+F++ K I H +LK N+L+
Sbjct: 94 AVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHSKR-----IIHRDLKAGNVLMTLE 145
Query: 442 EDPLISECGYS----KFLDPKKTCLFSSNGYTAPEKTVSE---------QGDVFSFGVIL 488
D +++ G S K L K+ + + APE + E + D++S G+ L
Sbjct: 146 GDIRLADFGVSAKNLKTLQ-KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 204
Query: 489 LELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSP 548
+E+ I+ P +R D +W+ + + +P
Sbjct: 205 IEM--------AQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNP 256
Query: 549 DDRPTMAEVLER 560
+ RP+ A++LE
Sbjct: 257 ETRPSAAQLLEH 268
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 104/252 (41%), Gaps = 31/252 (12%)
Query: 323 KNSAVYAVKRLK-KLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNG 381
+ A+ A K ++ K + ++++ + + HP I+ L+ + + ++ ++ G
Sbjct: 42 ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGG 101
Query: 382 SLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNEN 441
++ +++ +E R + + + L+F++ K I H +LK N+L+
Sbjct: 102 AVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHSKR-----IIHRDLKAGNVLMTLE 153
Query: 442 EDPLISECGYS----KFLDPKKTCLFSSNGYTAPEKTVSE---------QGDVFSFGVIL 488
D +++ G S K L K+ + + APE + E + D++S G+ L
Sbjct: 154 GDIRLADFGVSAKNLKTLQ-KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 212
Query: 489 LELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSP 548
+E+ I+ P +R D +W+ + + +P
Sbjct: 213 IEM--------AQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNP 264
Query: 549 DDRPTMAEVLER 560
+ RP+ A++LE
Sbjct: 265 ETRPSAAQLLEH 276
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 343 FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWK 400
+ Q + + L H +I+ C + + LV +Y GSL L + G
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL--- 119
Query: 401 LRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECG---------- 450
L A I +G+ +++ + H NL N+LL+ + I + G
Sbjct: 120 --LLFAQQICEGMAYLHSQH-----YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 451 YSKFLDPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLT 493
Y + + + +F E DV+SFGV L ELLT
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 343 FSQTMRQIGNLKHPNILPL--VCYNSTNEEKLLVYKYQSNGSLLSLLEAYIEGKRDFPWK 400
+ Q + + L H +I+ C + + LV +Y GSL L + G
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL--- 119
Query: 401 LRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECG---------- 450
L A I +G+ +++ + H NL N+LL+ + I + G
Sbjct: 120 --LLFAQQICEGMAYLHAQH-----YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 451 YSKFLDPKKTCLFSSNGYTAPEKTVSEQGDVFSFGVILLELLT 493
Y + + + +F E DV+SFGV L ELLT
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 20/176 (11%)
Query: 329 AVKRLKKLQV-SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLL 387
A K++ K V +D F Q + + +L HPNI+ L N + LV + + G L
Sbjct: 38 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE-- 95
Query: 388 EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEK-TIPHGNLKLSNILL--NENEDP 444
+ KR F R S A I K D + + K + H +LK N L + + P
Sbjct: 96 --RVVHKRVF----RESDAARIMK--DVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP 147
Query: 445 L-ISECGYSKFLDPKKT--CLFSSNGYTAP---EKTVSEQGDVFSFGVILLELLTG 494
L + + G + P K + Y +P E + D +S GV++ LL G
Sbjct: 148 LKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 319 MVRLKNSAVYAVKRLKKLQVSMDE---FSQTMRQIGNL-KHPNILPLVCYNSTNEEKLLV 374
+ R K + Y R L+ +E F Q + L HPNI+P + E +V
Sbjct: 45 LARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104
Query: 375 YKYQSNGSLLSLL-EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKL 433
+ + GS L+ +++G + I G+ K LD+++ H ++K
Sbjct: 105 TSFMAYGSAKDLICTHFMDGMNELAIAY---ILQGVLKALDYIHHMG-----YVHRSVKA 156
Query: 434 SNILLN 439
S+IL++
Sbjct: 157 SHILIS 162
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 288 FFVNEKERF--KLDDLLEATADL----RSQTICSSLF----MVRLKNSA-VYAVKRLKKL 336
F KE F K + + TA L R +T+ + F +V+ K S YA+K L K
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQ 77
Query: 337 QV-SMDEFSQTM---RQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA--- 389
+V + + T+ R + + P ++ L N +V +Y + G + S L
Sbjct: 78 KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 390 YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISEC 449
+ E F + ++ + LD +Y+ +LK N+L+++ +++
Sbjct: 138 FSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQVTDF 185
Query: 450 GYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
G++K + + L + Y APE K ++ D ++ GV++ ++ G
Sbjct: 186 GFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 330 VKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA 389
V +LK+++ +++E R + + P ++ L N +V +Y G + S L
Sbjct: 79 VVKLKQIEHTLNE----KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 390 ---YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLI 446
+ E F + ++ + LD +Y+ +LK N+L+++ +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQV 182
Query: 447 SECGYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
++ G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 183 TDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/190 (17%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 317 LFMVRLKNSAVYAVKRL--KKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLV 374
++ + K ++V A ++ K + ++++ + + + HPNI+ L+ ++
Sbjct: 26 VYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWIL 85
Query: 375 YKYQSNGSLLSLLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLS 434
++ + G++ +++ +E +R + L++++ + I H +LK
Sbjct: 86 IEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLH-----DNKIIHRDLKAG 137
Query: 435 NILLNENEDPLISECGYS----KFLDPKKTCLFSSNGYTAPEKTVSE---------QGDV 481
NIL + D +++ G S + ++ + + APE + E + DV
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 197
Query: 482 FSFGVILLEL 491
+S G+ L+E+
Sbjct: 198 WSLGITLIEM 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 20/176 (11%)
Query: 329 AVKRLKKLQV-SMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLL 387
A K++ K V +D F Q + + +L HPNI+ L N + LV + + G L
Sbjct: 55 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE-- 112
Query: 388 EAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEK-TIPHGNLKLSNILL--NENEDP 444
+ KR F R S A I K D + + K + H +LK N L + + P
Sbjct: 113 --RVVHKRVF----RESDAARIMK--DVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP 164
Query: 445 L-ISECGYSKFLDPKKT--CLFSSNGYTAP---EKTVSEQGDVFSFGVILLELLTG 494
L + + G + P K + Y +P E + D +S GV++ LL G
Sbjct: 165 LKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 330 VKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA 389
V +LK+++ +++E R + + P ++ L N +V +Y G + S L
Sbjct: 79 VVKLKQIEHTLNE----KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 390 ---YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLI 446
+ E F + ++ + LD +Y+ +LK N+L+++ +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQV 182
Query: 447 SECGYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
++ G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 183 TDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 330 VKRLKKLQVSMDEFSQTMRQIGNLKHPNILPLVCYNSTNEEKLLVYKYQSNGSLLSLLEA 389
V +LK+++ +++E R + + P ++ L N +V +Y G + S L
Sbjct: 79 VVKLKQIEHTLNE----KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 390 ---YIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLI 446
+ E F + ++ + LD +Y+ +LK N+L+++ +
Sbjct: 135 IGRFSEPHARF-YAAQIVLTFEYLHSLDLIYR-----------DLKPENLLIDQQGYIQV 182
Query: 447 SECGYSKFLDPKKTCLFSSNGYTAPE----KTVSEQGDVFSFGVILLELLTG 494
++ G++K + + L + Y APE K ++ D ++ GV++ E+ G
Sbjct: 183 TDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VGL|B Chain B, Ap2 Clathrin Adaptor Core
pdb|2JKR|B Chain B, Ap2 Clathrin Adaptor Core With Dileucine Peptide Rm(
Phosphos)qikrllse
pdb|2JKR|E Chain E, Ap2 Clathrin Adaptor Core With Dileucine Peptide Rm(
Phosphos)qikrllse
pdb|2JKT|B Chain B, Ap2 Clathrin Adaptor Core With Cd4 Dileucine Peptide Rm(
Phosphos)eikrllse Q To E Mutant
pdb|2JKT|E Chain E, Ap2 Clathrin Adaptor Core With Cd4 Dileucine Peptide Rm(
Phosphos)eikrllse Q To E Mutant
Length = 591
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
LLE+++EG D +++L++ T I K +K +E + + L L+ ++++P
Sbjct: 465 LLESFLEGFHDESTQVQLTLLTAIVK---LFLKKPSETQELVQQVLSLAT---QDSDNPD 518
Query: 446 ISECGYSKFLDPKKTCLFSSNGYTAPEKTVSEQ 478
+ + GY + L S++ TA E +SE+
Sbjct: 519 LRDRGYIYWR------LLSTDPVTAKEVVLSEK 545
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 29/127 (22%)
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPK--KTCLFSSNGYTAPEKTVS----EQG 479
I H +LK SNI++ + I + G ++ T + Y APE + E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 480 DVFSFGVILLELLTG--------------KTVEKTGIDLPKWVKAMV---------REEW 516
D++S GVI+ E++ G K +E+ G P+++K + R ++
Sbjct: 207 DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
Query: 517 TGEVFDK 523
G F+K
Sbjct: 267 AGYSFEK 273
>pdb|2XA7|B Chain B, Ap2 Clathrin Adaptor Core In Active Complex With Cargo
Peptides
Length = 592
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
LLE+++EG D +++L++ T I K +K +E + + L L+ ++++P
Sbjct: 465 LLESFLEGFHDESTQVQLTLLTAIVK---LFLKKPSETQELVQQVLSLAT---QDSDNPD 518
Query: 446 ISECGYSKFLDPKKTCLFSSNGYTAPEKTVSEQ 478
+ + GY + L S++ TA E +SE+
Sbjct: 519 LRDRGYIYWR------LLSTDPVTAKEVVLSEK 545
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 29/127 (22%)
Query: 426 IPHGNLKLSNILLNENEDPLISECGYSKFLDPK--KTCLFSSNGYTAPEKTVS----EQG 479
I H +LK SNI++ + I + G ++ T + Y APE + E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 480 DVFSFGVILLELLTG--------------KTVEKTGIDLPKWVKAMV---------REEW 516
D++S GVI+ E++ G K +E+ G P+++K + R ++
Sbjct: 207 DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
Query: 517 TGEVFDK 523
G F+K
Sbjct: 267 AGYSFEK 273
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 403 LSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPLISECGYSKFLDPKKTCL 462
+ +A IA G+ ++ N K + H +L N ++ E+ I + G ++ D +T
Sbjct: 163 IQMAGEIADGMAYL----NANKFV-HRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 215
Query: 463 FSSNG-------YTAPEK----TVSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAM 511
+ G + +PE + DV+SFGV+L E+ T G+ + ++ +
Sbjct: 216 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 275
Query: 512 VREEWTGEVFDKEVAKAGRQWAFPLLNVALKCVSNSPDDRPTMAEVLERIEE 563
+ G + DK F L+ + C +P RP+ E++ I+E
Sbjct: 276 ME----GGLLDK--PDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 318
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 31/145 (21%)
Query: 386 LLEAYIEGKRDFPWKLRLSIATGIAKGLDFMYQKSNEEKTIPHGNLKLSNILLNENEDPL 445
L + Y + F K L ++ I L++++ E HG++K SN+LLN
Sbjct: 138 LQKIYEANAKRFSRKTVLQLSLRILDILEYIH-----EHEYVHGDIKASNLLLNYKNPDQ 192
Query: 446 ISECGY-------------SKFLDPKK--------TCLFSSNGYTAPEKTVSEQGDVFSF 484
+ Y + DPK+ T + + NG AP S +GD+
Sbjct: 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG-VAP----SRRGDLEIL 247
Query: 485 GVILLELLTGKTVEKTGIDLPKWVK 509
G +++ LTG + + PK+V+
Sbjct: 248 GYCMIQWLTGHLPWEDNLKDPKYVR 272
>pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21
Length = 816
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 417 YQKSNEEKTIPHG--NLKLSNILLNENEDPLISECGYSKFLDPKKTCLFSSNGYTAPEKT 474
Y K ++K I N SNI L +D ++ C ++D + T L + N A K
Sbjct: 78 YAKPPKDKKIKEAGTNFGSSNIPL---QDKCVTICHGYNYIDLEWTHLVAENSSVA--KK 132
Query: 475 VSEQGDVFSFGVILLELLTGKTVEKTGIDLPKWVKAMVREEWTGEVFDKEVAKAGRQWAF 534
SE+ VFS+ LL L + L +W K R T E+ ++ Q
Sbjct: 133 WSEE--VFSYAYNLLSLNKNQ--------LGEWEKLYFRLT-TVEMEKNKIPVKAIQ--- 178
Query: 535 PLLNVALKCVSNSPDDRPTMAEVLERIEEVVNGNDERD 572
KC+S DDR +++ LE+I ND D
Sbjct: 179 -------KCLSKDKDDRARISKALEKIGWPSGKNDAID 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,579,581
Number of Sequences: 62578
Number of extensions: 647229
Number of successful extensions: 3117
Number of sequences better than 100.0: 775
Number of HSP's better than 100.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 593
Number of HSP's that attempted gapping in prelim test: 2309
Number of HSP's gapped (non-prelim): 823
length of query: 608
length of database: 14,973,337
effective HSP length: 104
effective length of query: 504
effective length of database: 8,465,225
effective search space: 4266473400
effective search space used: 4266473400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)