Citrus Sinensis ID: 042950

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
Protein Sequence
MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSVKKQKYYTASGRKGQHQNLANMAIAYNGRPVAQMKPPPMKAVVQWNDESREWFLRPIQNLEPGRIHKKFG
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHccccccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHcccccHHHHHHHHHHHcccccccccHHHHHccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccc
Coil and Loop (DISEMBL)
maelllfrplfqgtdEAEQMYKICSVLGNPTMDSWADELRQAMLSGvnlselmpsaSKDAINLIESlcswdpckrptAAEALQHLFFKrclyapphirsvpavatTTRGMLkqqgagieaealpnpniakqlspldiimvvqpknsvkkqkyytasgrkgqhqNLANMAiayngrpvaqmkpppmkavVQWNDESREWflrpiqnlepgrihkkfg
Flexible Loop (DISEMBL)
MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSVKKQKYYTasgrkgqhqnLANMAIAYNGRPVAQMKPPPMKAVVQWNDESREWFlrpiqnlepgrihkkfg
Low Complexity Region (SEG)
MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSVKKQKYYTASGRKGQHQNLANMAIAYNGRPVAQMKPPPMKAVVQWNDESREWFLRPIQNLEPGRIHKKFG
Disordered region (IsUnstruct)
***LLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELM***SKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLK***************IAKQLSPLDIIMVVQP********YY************ANMAIAYN*************AVVQWNDESREWFLRPIQ************
Disordered Region (DISOPRED)
MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP**************************************************************************************************************************
Disordered Region (DISEMBL)
MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSVKKQKYYTASGRKGQHQNLANMAIAYNGRPVAQMKPPPMKAVVQWNDESREWFLRPIQNLEPGRIHKKFG
Disordered Region (DISPRO)
MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHI***********************************************************************************************************NLEP********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSVKKQKYYTASGRKGQHQNLANMAIAYNGRPVAQMKPPPMKAVVQWNDESREWFLRPIQNLEPGRIHKKFG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	216	2.2.26 [Sep-21-2011]
Q6Z8C8	459	Cyclin-dependent kinase F	yes	no	0.625	0.294	0.415	8e-27
P20794	623	Serine/threonine-protein	no	no	0.652	0.226	0.339	4e-18
Q84SN3	433	Cyclin-dependent kinase F	no	no	0.435	0.217	0.441	1e-17
P20793	622	Serine/threonine-protein	yes	no	0.606	0.210	0.361	2e-17
Q04859	622	Serine/threonine-protein	no	no	0.407	0.141	0.437	2e-17
Q55FJ6	507	Probable serine/threonine	yes	no	0.407	0.173	0.424	2e-17
P43294	443	Serine/threonine-protein	no	no	0.402	0.196	0.431	2e-15
Q62726	629	Serine/threonine-protein	no	no	0.407	0.139	0.427	2e-14
Q9JKV2	629	Serine/threonine-protein	no	no	0.407	0.139	0.427	2e-14
Q9UPZ9	632	Serine/threonine-protein	no	no	0.407	0.139	0.406	4e-14

>sp|Q6Z8C8|CDKF4_ORYSJ Cyclin-dependent kinase F-4 OS=Oryza sativa subsp. japonica GN=CDKF-4 PE=2 SV=1

 Score =  120 bits (301), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 86/154 (55%), Gaps = 19/154 (12%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAELL   PLF GT EA+++ KIC+V+G+P   SW   L  A         +SG  L+E+
Sbjct: 189 MAELLTLHPLFPGTSEADEILKICNVIGSPDEQSWPQGLSLAETMKFQFPQVSGNQLAEV 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAV--------- 103
           M S S +A++LI SLCSWDPCKRP AAE LQH FF+ C + PP +RS   V         
Sbjct: 249 MTSVSSEAVDLISSLCSWDPCKRPKAAEVLQHTFFQGCTFVPPTVRSKAGVLPKTPPCVG 308

Query: 104 --ATTTRGMLKQQGAGIEAEALPNPNIAKQLSPL 135
               +  GM ++   G  +   P+ N + + S L
Sbjct: 309 VKGVSEHGMPRRYSTGTLSTTKPHSNASLKSSGL 342

Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 3

>sp|P20794|MAK_HUMAN Serine/threonine-protein kinase MAK OS=Homo sapiens GN=MAK PE=1 SV=2

 Score = 91.7 bits (226), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 15/156 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--------ELRQAMLSGVNLSEL 52
           MAEL + RPLF GT E ++++KIC VLG P    W +          R      +NL  L
Sbjct: 190 MAELYMLRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCVPINLKTL 249

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGM-- 110
           +P+AS +AI L+  + +WDP KRPTA++AL+H +F+      P    + +  +  + +  
Sbjct: 250 IPNASNEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGPSSNHLESKQSLNKQLQP 309

Query: 111 LKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNS 146
           L+ + + +E E  P P+I  Q     ++   QPK S
Sbjct: 310 LESKPSLVEVEPKPLPDIIDQ-----VVGQPQPKTS 340

Essential for the regulation of ciliary length and required for the long-term survival of photoreceptors (By similarity). Phosphorylates FZR1 in a cell cycle-dependent manner. Plays a role in the transcriptional coactivation of AR. Could play an important function in spermatogenesis. May play a role in chromosomal stability in prostate cancer cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q84SN3|CDKF3_ORYSJ Cyclin-dependent kinase F-3 OS=Oryza sativa subsp. japonica GN=CDKF-3 PE=2 SV=1

 Score = 90.1 bits (222), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 8/102 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN--------LSEL 52
           +AEL    PLF G  E +Q+YKIC+VLG P    W + +     S  N        L EL
Sbjct: 189 LAELFTLSPLFPGGSETDQLYKICAVLGTPDHTVWPEGMNLPRSSSFNFFQIPPRNLWEL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP 94
           +P+A+ +AI+LI+ LCSWDP +RPTA ++LQH FF    + P
Sbjct: 249 IPNATLEAIDLIQQLCSWDPRRRPTAEQSLQHPFFNVGNWVP 290

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P20793|MAK_RAT Serine/threonine-protein kinase MAK OS=Rattus norvegicus GN=Mak PE=1 SV=2

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 10/141 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--------ELRQAMLSGVNLSEL 52
           MAEL  FRPLF GT E ++++KIC VLG P    W +          R      +NL  L
Sbjct: 190 MAELYTFRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCIPINLKTL 249

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGML- 111
           +P+AS +AI L+  + +WDP KRPTA++AL+H +F+      P    + A  T  + +  
Sbjct: 250 IPNASSEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGPSAHHLDAKQTLHKQLQP 309

Query: 112 -KQQGAGIEAEALPNPNIAKQ 131
            + + +  E +  P PNI  Q
Sbjct: 310 PEPKPSSSERDPKPLPNILDQ 330

Essential for the regulation of ciliary length and required for the long-term survival of photoreceptors (By similarity). Could play an important function in spermatogenesis. Phosphorylates FZR1 in a cell cycle-dependent manner (By similarity). Plays a role in the transcriptional coactivation of AR.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q04859|MAK_MOUSE Serine/threonine-protein kinase MAK OS=Mus musculus GN=Mak PE=1 SV=2

 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 8/96 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--------ELRQAMLSGVNLSEL 52
           MAEL  FRPLF GT E ++++KIC VLG P    W +          R      +NL  L
Sbjct: 190 MAELYTFRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCIPINLKTL 249

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +P+AS +AI L+  + +WDP KRPTA++AL+H +F+
Sbjct: 250 IPNASSEAIQLMTEMLNWDPKKRPTASQALKHPYFQ 285

Essential for the regulation of ciliary length and required for the long-term survival of photoreceptors. Could have an important function in sensory cells and in spermatogenesis. May participate in signaling pathways used in visual and olfactory sensory transduction. Phosphorylates FZR1 in a cell cycle-dependent manner. Plays a role in the transcriptional coactivation of AR.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q55FJ6|Y8078_DICDI Probable serine/threonine-protein kinase DDB_G0268078 OS=Dictyostelium discoideum GN=DDB_G0268078 PE=3 SV=1

 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 11/99 (11%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-----------L 49
           MAEL   +P+F G+ E +Q++KIC+++G+PT  +W D ++ A   G             L
Sbjct: 189 MAELYSLKPMFPGSSEIDQLFKICTIMGSPTSATWIDGIKLANSMGFTFPNVQPPSINPL 248

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           S L+P+A++DAI LI  L  +DP KRPT  +ALQH +FK
Sbjct: 249 STLLPNANQDAIELITDLLQYDPLKRPTPLQALQHRYFK 287

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|P43294|MHK_ARATH Serine/threonine-protein kinase MHK OS=Arabidopsis thaliana GN=MHK PE=2 SV=2

 Score = 82.8 bits (203), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 8/95 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--------ELRQAMLSGVNLSEL 52
           +AEL    PLF G  E +Q+YKIC VLG P   ++ +         +         +++L
Sbjct: 197 LAELYALTPLFPGESEIDQLYKICCVLGKPDWTTFPEAKSISRIMSISHTEFPQTRIADL 256

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +P+A+ +AI+LI  LCSWDP KRPTA EAL H FF
Sbjct: 257 LPNAAPEAIDLINRLCSWDPLKRPTADEALNHPFF 291

May play a role in the regulation of plant growth and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q62726|ICK_RAT Serine/threonine-protein kinase ICK OS=Rattus norvegicus GN=Ick PE=1 SV=1

 Score = 79.3 bits (194), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 8/96 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
           MAE+   RPLF G  E + ++KIC VLG P    W +  +L  AM          NL  L
Sbjct: 190 MAEVYTLRPLFPGASEIDTIFKICQVLGTPKKTDWPEGYQLSSAMNFIWPQCIPNNLKTL 249

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +P+AS +AI L+  L  WDP KRPTA++AL++ +F+
Sbjct: 250 IPNASSEAIQLLRDLLQWDPKKRPTASQALRYPYFQ 285

May play a role in cardiac development.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q9JKV2|ICK_MOUSE Serine/threonine-protein kinase ICK OS=Mus musculus GN=Ick PE=2 SV=2

 Score = 79.3 bits (194), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 8/96 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
           MAE+   RPLF G  E + ++KIC VLG P    W +  +L  AM          NL  L
Sbjct: 190 MAEVYTLRPLFPGASEIDTIFKICQVLGTPKKTDWPEGYQLSSAMNFLWPQCIPNNLKTL 249

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +P+AS +AI L+  L  WDP KRPTA++AL++ +F+
Sbjct: 250 IPNASSEAIQLLRDLLQWDPKKRPTASQALRYPYFQ 285

May play a role in cardiac development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q9UPZ9|ICK_HUMAN Serine/threonine-protein kinase ICK OS=Homo sapiens GN=ICK PE=1 SV=1

 Score = 78.2 bits (191), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 8/96 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
           MAE+   RPLF G  E + ++KIC VLG P    W +  +L  AM          NL  L
Sbjct: 190 MAEVYTLRPLFPGASEIDTIFKICQVLGTPKKTDWPEGYQLSSAMNFRWPQCVPNNLKTL 249

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +P+AS +A+ L+  +  WDP KRPTA++AL++ +F+
Sbjct: 250 IPNASSEAVQLLRDMLQWDPKKRPTASQALRYPYFQ 285

May play a key role in the development of multiple organ systems and particularly in cardiac development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
357484657	449	Serine/threonine protein kinase ICK [Med	0.976	0.469	0.425	4e-42
255557681	455	mak, putative [Ricinus communis] gi|2235	0.972	0.461	0.413	1e-40
224074450	453	predicted protein [Populus trichocarpa]	0.972	0.463	0.428	5e-40
356496445	450	PREDICTED: cyclin-dependent kinase F-4-l	0.986	0.473	0.407	3e-39
356558874	450	PREDICTED: cyclin-dependent kinase F-4-l	0.902	0.433	0.420	6e-39
449456767	449	PREDICTED: cyclin-dependent kinase F-4-l	0.962	0.463	0.400	3e-37
356531493	455	PREDICTED: cyclin-dependent kinase F-4-l	0.981	0.465	0.392	6e-37
224073080	437	predicted protein [Populus trichocarpa]	0.981	0.485	0.403	5e-35
356559079	414	PREDICTED: cyclin-dependent kinase F-4-l	0.615	0.321	0.531	5e-35
145333417	404	putative serine/threonine protein kinase	0.935	0.5	0.404	8e-35

>gi|357484657|ref|XP_003612616.1| Serine/threonine protein kinase ICK [Medicago truncatula] gi|355513951|gb|AES95574.1| Serine/threonine protein kinase ICK [Medicago truncatula]

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/256 (42%), Positives = 140/256 (54%), Gaps = 45/256 (17%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAEL   RPLF G  EA+++YKIC V+GNPT DSWAD L+ A         L+GVNLS L
Sbjct: 189 MAELFSLRPLFPGASEADEIYKICGVIGNPTTDSWADGLKLARDINYQFPQLAGVNLSAL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATT-----T 107
           +PSAS  AI+LI+SLCSWDPCKRPTA+EALQH FF+ C Y PP +RS  AVA T     T
Sbjct: 249 IPSASDHAISLIQSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRSR-AVARTPPPAGT 307

Query: 108 RGMLKQQGAGIEAEAL---------------PNPNIAKQLSPLDIIMVVQPKN--SVKKQ 150
           RG L QQG      AL               P+  + ++L  ++   +   K+  +  + 
Sbjct: 308 RGALDQQGVKRYPGALHSSKPTNYFSSPKVQPSSGVQRKLDMVNQEGIKNEKSMKTTTQS 367

Query: 151 KY--------------YTASGRKGQHQNLANMAIAYNGRPVAQMKPPPMKAVVQWNDESR 196
           KY               T  G     + LANM+I    + + Q +PPPMKA V W+ ES 
Sbjct: 368 KYRHPGKESPTSVIKGRTIHGISETAERLANMSIGNRRQSMGQPRPPPMKAGVNWSSESP 427

Query: 197 EWFLRPIQNLEPGRIH 212
            + LRP   +  GR +
Sbjct: 428 NFMLRPAPQIPTGRTY 443

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557681|ref|XP_002519870.1| mak, putative [Ricinus communis] gi|223540916|gb|EEF42474.1| mak, putative [Ricinus communis]

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/259 (41%), Positives = 135/259 (52%), Gaps = 49/259 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAEL   RPLF GT EA+++YKIC+++G+PT DSWAD L  A           GV LS L
Sbjct: 189 MAELFTLRPLFPGTSEADEIYKICNIIGSPTKDSWADGLNLARAINYQFPQFGGVQLSAL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATT-----T 107
           +PSAS+DA+NLI+SLCSWDP KRP+A EALQH FF+ C Y PP +RS   V  T      
Sbjct: 249 IPSASEDAVNLIKSLCSWDPSKRPSAGEALQHPFFQSCFYVPPTLRSRAPVTRTPPSAGA 308

Query: 108 RGMLKQQGAGIEAEALPNPNIA-KQLSP-------------LDIIMVVQPKN-----SVK 148
           +  L+QQ A      L N  ++   +SP             LD++     +N     S  
Sbjct: 309 KCTLEQQYARRPTGPLSNSKVSPAYMSPKLNASLSTGVQRKLDLVNQDASRNDKSFRSST 368

Query: 149 KQKYYTASGRKGQHQNLAN-----------------MAIAYNGRPVAQMKPPPMKAVVQW 191
           KQ+ Y   GRK    N+ N                 MA+  N     Q +PPPMKA VQW
Sbjct: 369 KQQKYRPPGRKSPPTNIINKSRAARGVSDTADKFASMAVGSNRHSGLQQRPPPMKAGVQW 428

Query: 192 NDESREWFLRPIQNLEPGR 210
             ES + FLRP    + GR
Sbjct: 429 AAESGDMFLRPSHQFQAGR 447

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074450|ref|XP_002304373.1| predicted protein [Populus trichocarpa] gi|222841805|gb|EEE79352.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/257 (42%), Positives = 145/257 (56%), Gaps = 47/257 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAEL   RPLF GT EA+++YKICSV+G+PT D+WAD L  A          +GV+L  L
Sbjct: 189 MAELFTLRPLFPGTSEADEIYKICSVIGSPTTDTWADGLNLARAINYQFPQFAGVHLPTL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATT-----T 107
           +PSAS+DAINLI+SLCSWDPC RP+AA+ALQH FF+ C Y PP +R   A+  T     T
Sbjct: 249 IPSASEDAINLIKSLCSWDPCTRPSAADALQHPFFQSCFYVPPSLRPRAAITRTPASAGT 308

Query: 108 RGMLKQQ------GAGIEAE---ALPNPNIAKQLSP-----LDIIM--VVQPKNSVK--- 148
           +G L+QQ      GA   ++   + P+P +   LS      LD++     +P  S+K   
Sbjct: 309 KGGLEQQCGRNLPGALSNSKLTNSFPSPKLHASLSTGVQRKLDMVNQDSRKPDKSLKSST 368

Query: 149 KQKY---------YTASGR--KGQHQN---LANMAIAYNGRPVAQM-KPPPMKAVVQWND 193
           K +Y         + + GR  +G  +     A+M IA   + + Q  KPP MKA VQW  
Sbjct: 369 KPRYQPPGRKSPTFMSKGRVARGASETADKFASMTIASRRQSLGQQPKPPTMKAGVQWTG 428

Query: 194 ESREWFLRPIQNLEPGR 210
           ES   FLRP Q    GR
Sbjct: 429 ESGGMFLRPTQQFPHGR 445

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496445|ref|XP_003517078.1| PREDICTED: cyclin-dependent kinase F-4-like [Glycine max]

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/260 (40%), Positives = 137/260 (52%), Gaps = 47/260 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAEL   RPLF G  EA+++YKIC V+GNPT +SWAD L+ A         L+GV+LS L
Sbjct: 189 MAELFSLRPLFPGASEADEIYKICGVIGNPTFESWADGLKLARDINYQFPQLAGVHLSAL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATT-----T 107
           +PSAS DAI+LI SLCSWDPCKRPTA+EALQH FF+ C Y PP +R+  AVA T     T
Sbjct: 249 IPSASDDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRNR-AVARTPPPAGT 307

Query: 108 RGMLKQQGAGIEAEALPNPNIAKQLSP--------------LDIIMVVQPKNS----VKK 149
           RG L QQG    + ALP   ++   S               LD++     KN       K
Sbjct: 308 RGALDQQGVKRYSGALPTSKLSNNFSSMKLHPPLASGVQRKLDMVNQDGIKNEKPMRTTK 367

Query: 150 QKYY--------------TASGRKGQHQNLANMAIAYNGRPVAQMKPPP-MKAVVQWNDE 194
            KY               +  G     + L N++++   + + Q +PPP MKA   W  E
Sbjct: 368 PKYRQPGKDSPTSMNKGRSVRGVSETAEKLGNLSVSSRRQSMGQPRPPPPMKAGGNWISE 427

Query: 195 SREWFLRPIQNLEPGRIHKK 214
           S  + L P Q +  GR   +
Sbjct: 428 SGNFILGPAQQIPTGRTFAR 447

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558874|ref|XP_003547727.1| PREDICTED: cyclin-dependent kinase F-4-like [Glycine max]

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 128/240 (53%), Gaps = 45/240 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAEL   RPLF G+ EA+++YKICSVLG+PT +SWAD L+ A         L+GV+LS L
Sbjct: 189 MAELFTLRPLFPGSSEADEIYKICSVLGSPTTESWADGLKLARDINYQFPQLAGVHLSTL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVAT----TTR 108
           +PS S DAI+L+ SLCSWDPCKRPTAAE LQH FF+ C Y PP +R+     T     TR
Sbjct: 249 IPSRSDDAISLVTSLCSWDPCKRPTAAEVLQHPFFQSCFYIPPSLRTRAVTRTPPSAGTR 308

Query: 109 GMLKQQGAGIEAEALPNPNIAKQLSP--------------LDIIMV--VQPKNSVK--KQ 150
           G L + G    + ALPN  I    +               LD+     ++ K S+K  +Q
Sbjct: 309 GSLDRLGLKRYSGALPNTKITNNFTSPKVQASIASGVQRKLDMANEDGIKSKKSLKTTQQ 368

Query: 151 KYY---------------TASGRKGQHQNLANMAIAYNGRPVAQMKPPPMKAVVQWNDES 195
             Y               TA G     + L NM+I      + Q +PPPMKA V W  ES
Sbjct: 369 SKYRLPGKGSPTSINKGRTARGVSETAEKLVNMSIGTRRLSLGQTRPPPMKAGVNWISES 428

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456767|ref|XP_004146120.1| PREDICTED: cyclin-dependent kinase F-4-like [Cucumis sativus] gi|449520459|ref|XP_004167251.1| PREDICTED: cyclin-dependent kinase F-4-like [Cucumis sativus]

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/257 (40%), Positives = 136/257 (52%), Gaps = 49/257 (19%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAEL   RPLF G  E +Q+YKIC++LG PTMD+W+  L  A          +GV+LS +
Sbjct: 185 MAELFTLRPLFPGASETDQIYKICNILGTPTMDTWSGGLCLARNINYQFPQFNGVHLSVV 244

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATT-----T 107
           +PSAS DA+NLI SLCSWDP KRPTA EALQH FF+ C Y PP +R+ P +  T     T
Sbjct: 245 IPSASDDAVNLIASLCSWDPSKRPTAMEALQHPFFQSCYYVPPSLRARPPITRTPPSAGT 304

Query: 108 RGMLKQQGAGIEAEALPNPNIAKQLSP--------------LDIIMVVQPKN------SV 147
           + +L+QQ A     AL +  I    S               LD++     KN      +V
Sbjct: 305 KDVLEQQTAKKYPVALSDSRIGGNFSSPKLPALLSTGVQRKLDLMNQDLNKNDKTMKSTV 364

Query: 148 KKQKYY-------TASGRKGQH--------QNLANMAIAYNGRPVAQMKPPPMKAVVQWN 192
           ++QKY        T S  KG +        + LANM IA     + Q+ P PMKA V+W+
Sbjct: 365 RQQKYRPPVRNSPTNSIYKGNNVRGVSDTGEKLANMTIAPRKPTIGQL-PRPMKAGVRWS 423

Query: 193 DESREWFLRPIQNLEPG 209
             S +  +RP Q  + G
Sbjct: 424 SSSSDLLIRPAQEFQTG 440

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531493|ref|XP_003534312.1| PREDICTED: cyclin-dependent kinase F-4-like [Glycine max]

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/265 (39%), Positives = 136/265 (51%), Gaps = 53/265 (20%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAEL   RPLF G  EA+++YKIC V+GNPT +SWAD L+ A         L+GV+LS L
Sbjct: 189 MAELFSLRPLFPGASEADEIYKICGVIGNPTFESWADGLKLARDINYQFPQLAGVHLSAL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATT-----T 107
           +PSAS DAI+LI SLCSWDPCKRPTA+EALQH FF+ C Y PP +R+  AVA T     T
Sbjct: 249 IPSASDDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRNR-AVARTPPPAGT 307

Query: 108 RGMLKQQGAGIEAEALPNPNIAKQLSPLDI-------------------------IMVVQ 142
           RG L QQ     + ALP   ++   S + +                         +   +
Sbjct: 308 RGALDQQEVKRYSGALPTSKLSNNFSSMKLHPPLASGVQRKLDMVNQDGIKNEKPVRTTK 367

Query: 143 PKNSVKKQKYYTASGRKGQH--------QNLANMAIAYNGRP----VAQMK-PPPMKAVV 189
           PK     +     S  KG+         + L N+++  N R     + Q + PPPMKA  
Sbjct: 368 PKYRQPGKDSSPTSMSKGRSVRGVSETAEKLRNLSVT-NRRQSSIGIGQPRPPPPMKAGG 426

Query: 190 QWNDESREWFLRPIQNLEPGRIHKK 214
            W  ES  + L P Q +  GR   +
Sbjct: 427 NWISESGNFILGPAQQISTGRTFAR 451

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073080|ref|XP_002303962.1| predicted protein [Populus trichocarpa] gi|222841394|gb|EEE78941.1| predicted protein [Populus trichocarpa]

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 124/243 (51%), Gaps = 31/243 (12%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM--------LSGVNLSEL 52
           MAEL   RPLF GT EA QMYKICSVLG PTMDSWAD +  A           GV LS L
Sbjct: 189 MAELFTLRPLFPGTGEANQMYKICSVLGAPTMDSWADGIHLARTINYQFPEFDGVPLSAL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLK 112
           +PSAS+DAI+LI  LCSW+PC RPTA EAL+H FF+ C Y PP +R   A +  T G  +
Sbjct: 249 IPSASEDAISLISMLCSWNPCNRPTADEALKHPFFRSCFYIPPSLRFRDAASAGTSGESE 308

Query: 113 QQ------GA---GIEAEALPNPNIAKQLSPLDIIMVVQPKN---SVKKQKY-------- 152
           Q+      GA    I   + P+PN     S   +   +   N   S+  +++        
Sbjct: 309 QECYKRYHGALSNSILNHSFPSPNKLHAYSSTPVHRDLNRANQHVSIPAKQFRFGPQSSN 368

Query: 153 ---YTASGRKGQHQNLANMAIAYNGRPVAQMKPPPMKAVVQWNDESREWFLRPIQNLEPG 209
               TA G       L +M      + V Q +  P+KA  Q   ES + F+RP Q   P 
Sbjct: 369 MGGTTARGVSDTADTLPHMTNGSRKQFVVQSRLLPLKAGEQGIAESADMFIRPAQKFHPA 428

Query: 210 RIH 212
            I+
Sbjct: 429 TIY 431

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559079|ref|XP_003547829.1| PREDICTED: cyclin-dependent kinase F-4-like [Glycine max]

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 77/145 (53%), Positives = 95/145 (65%), Gaps = 12/145 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAEL   RPLF G+ EA+++YKICSV+G+PT +SWAD L+ A         L+ V+LS L
Sbjct: 189 MAELFTLRPLFPGSSEADEIYKICSVIGSPTTESWADGLKLARDINYQFPQLASVHLSTL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVAT----TTR 108
           +PS S DAI+L+ SLCSWDPCKRPTAAEALQH FF+ C Y PP +R+     T     TR
Sbjct: 249 IPSRSDDAISLVTSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTRAVTRTPPSAGTR 308

Query: 109 GMLKQQGAGIEAEALPNPNIAKQLS 133
           G L +QG    + ALPN  I    S
Sbjct: 309 GSLDRQGLKRYSGALPNTKITNNFS 333

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145333417|ref|NP_001078408.1| putative serine/threonine protein kinase [Arabidopsis thaliana] gi|332658743|gb|AEE84143.1| putative serine/threonine protein kinase [Arabidopsis thaliana]

 Score =  152 bits (384), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/262 (40%), Positives = 129/262 (49%), Gaps = 60/262 (22%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
           MAELL  RP+F G  EA+++YKICSV+G PT ++W + L  A         L GV LS L
Sbjct: 133 MAELLSLRPIFPGASEADEIYKICSVIGTPTEETWLEGLNLANTINYQFPQLPGVPLSSL 192

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATT-----T 107
           MPSAS+DAINLIE LCSWDP  RPTAAE LQH FF+ C Y PP +R  P+VA T      
Sbjct: 193 MPSASEDAINLIERLCSWDPSSRPTAAEVLQHPFFQSCFYVPPSLRPKPSVARTPPPVGP 252

Query: 108 RGMLKQQGAGIEAEALPNPN-IAKQLSP-------------LDIIMVVQPKN------SV 147
           RG  + Q       +L N       +SP             LD++     +N      SV
Sbjct: 253 RGSFEHQSVKRYPVSLANAKPFNSYVSPKSNAAFGSGVQRKLDMVNQDGTRNTKPVRSSV 312

Query: 148 KKQKY----------------YTASGRKGQHQNLANMAIAYNG---RPVA------QMKP 182
           +  KY                 T S        LANM I   G     V+      Q+KP
Sbjct: 313 RDSKYRPPGKKSPPASLNKNRVTRSSVSETADKLANMTIGATGSRRHSVSVVGQHQQLKP 372

Query: 183 PPMKAVVQWNDESREWFLRPIQ 204
           PPMKA   W  E+R+ FLRP Q
Sbjct: 373 PPMKA--GWVGETRDMFLRPTQ 392

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
TAIR|locus:2134746	464	AT4G19110 [Arabidopsis thalian	0.490	0.228	0.587	4e-37
TAIR|locus:2163583	499	AT5G45430 [Arabidopsis thalian	0.601	0.260	0.510	3.8e-35
UNIPROTKB|F1RV90	624	MAK "Uncharacterized protein"	0.805	0.278	0.331	2.3e-18
UNIPROTKB|Q8IXN4	457	MAK "MAK protein" [Homo sapien	0.652	0.308	0.346	4.8e-18
UNIPROTKB|P20794	623	MAK "Serine/threonine-protein	0.652	0.226	0.346	1e-17
RGD|3036	622	Mak "male germ cell-associated	0.606	0.210	0.368	1.3e-17
UNIPROTKB|P20793	622	Mak "Serine/threonine-protein	0.606	0.210	0.368	1.3e-17
UNIPROTKB|Q2YDJ7	382	MAK "Uncharacterized protein"	0.745	0.421	0.327	1.5e-17
MGI|MGI:96913	622	Mak "male germ cell-associated	0.606	0.210	0.368	1.7e-17
UNIPROTKB|E2RE89	589	MAK "Uncharacterized protein"	0.652	0.239	0.352	2.4e-17

TAIR|locus:2134746 AT4G19110 [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
 Identities = 67/114 (58%), Positives = 79/114 (69%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSEL 52
             MAELL  RP+F G  EA+++YKICSV+G PT ++W + L  A         L GV LS L
Sbjct:   189 MAELLSLRPIFPGASEADEIYKICSVIGTPTEETWLEGLNLANTINYQFPQLPGVPLSSL 248

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATT 106
             MPSAS+DAINLIE LCSWDP  RPTAAE LQH FF+ C Y PP +R  P+VA T
Sbjct:   249 MPSASEDAINLIERLCSWDPSSRPTAAEVLQHPFFQSCFYVPPSLRPKPSVART 302

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2163583 AT5G45430 [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 3.8e-35, Sum P(2) = 3.8e-35
 Identities = 72/141 (51%), Positives = 91/141 (64%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML--------SGVNLSEL 52
             MAELL  RPLF G  EA+++YKICSV+G+PT ++W + L  A +         GV+LS +
Sbjct:   189 MAELLSLRPLFPGASEADEIYKICSVIGSPTEETWLEGLNLASVINYQFPQFPGVHLSSV 248

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLK 112
             MP AS DA+NLIE LCSWDPC RPT AEALQH FF+ C Y PP +R  P ++   RG L+
Sbjct:   249 MPYASADAVNLIERLCSWDPCNRPTTAEALQHPFFQSCYYIPPSLR--PKLSEP-RGSLE 305

Query:   113 QQGAGIEAEALPNPNIAKQLS 133
             QQ +     A P  N  K L+
Sbjct:   306 QQQSVKRLPAAPTYNANKPLN 326

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0045727 "positive regulation of translation" evidence=RCA

UNIPROTKB|F1RV90 MAK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 231 (86.4 bits), Expect = 2.3e-18, P = 2.3e-18
 Identities = 65/196 (33%), Positives = 97/196 (49%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
             MAEL   RPLF GT E ++++KIC VLG P    W +  +L  +M       + +NL  L
Sbjct:   190 MAELYTLRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCAPINLKTL 249

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPP---HIRSVPAVATTTRG 109
             +P+AS +AI L+  + SWDP KRPTA++AL+H +F+      P   H+ S   +    + 
Sbjct:   250 IPNASNEAIQLMTEMLSWDPKKRPTASQALKHPYFQVGQVLGPSSHHLESKQPLNKQVQP 309

Query:   110 MLKQQGAG-IEAEALP--NPNIAKQLSPLDI---IMVVQPKNSVKKQKYYTASGRKGQHQ 163
             +  +   G +E + LP  N   A Q  P +    +  +QP      Q+      ++ Q Q
Sbjct:   310 LESKPSVGDLEPKLLPDINDQTAGQPQPRNSHQPLQSIQPPQDTSGQQAPKQQSQQKQPQ 369

Query:   164 NL-----ANMAIAYNG 174
              L      NM I  NG
Sbjct:   370 TLFPRIVKNMPIKPNG 385

GO:0072686 "mitotic spindle" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045494 "photoreceptor cell maintenance" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q8IXN4 MAK "MAK protein" [Homo sapiens (taxid:9606)]

 Score = 225 (84.3 bits), Expect = 4.8e-18, P = 4.8e-18
 Identities = 54/156 (34%), Positives = 86/156 (55%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
             MAEL + RPLF GT E ++++KIC VLG P    W +  +L  +M         +NL  L
Sbjct:   190 MAELYMLRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCVPINLKTL 249

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGM-- 110
             +P+AS +AI L+  + +WDP KRPTA++AL+H +F+      P    + +  +  + +  
Sbjct:   250 IPNASNEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGPSSNHLESKQSLNKQLQP 309

Query:   111 LKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNS 146
             L+ + + +E E  P P+I  Q     ++   QPK S
Sbjct:   310 LESKPSLVEVEPKPLPDIIDQ-----VVGQPQPKTS 340

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P20794 MAK "Serine/threonine-protein kinase MAK" [Homo sapiens (taxid:9606)]

 Score = 225 (84.3 bits), Expect = 1.0e-17, P = 1.0e-17
 Identities = 54/156 (34%), Positives = 86/156 (55%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
             MAEL + RPLF GT E ++++KIC VLG P    W +  +L  +M         +NL  L
Sbjct:   190 MAELYMLRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCVPINLKTL 249

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGM-- 110
             +P+AS +AI L+  + +WDP KRPTA++AL+H +F+      P    + +  +  + +  
Sbjct:   250 IPNASNEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGPSSNHLESKQSLNKQLQP 309

Query:   111 LKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNS 146
             L+ + + +E E  P P+I  Q     ++   QPK S
Sbjct:   310 LESKPSLVEVEPKPLPDIIDQ-----VVGQPQPKTS 340

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0007283 "spermatogenesis" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IDA;NAS

GO:0005524 "ATP binding" evidence=NAS

GO:0004672 "protein kinase activity" evidence=NAS

GO:0003713 "transcription coactivator activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0001917 "photoreceptor inner segment" evidence=IDA

GO:0045494 "photoreceptor cell maintenance" evidence=ISS

GO:0001750 "photoreceptor outer segment" evidence=ISS

GO:0072686 "mitotic spindle" evidence=IDA

GO:0030496 "midbody" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

RGD|3036 Mak "male germ cell-associated kinase" [Rattus norvegicus (taxid:10116)]

 Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 52/141 (36%), Positives = 78/141 (55%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
             MAEL  FRPLF GT E ++++KIC VLG P    W +  +L  +M         +NL  L
Sbjct:   190 MAELYTFRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCIPINLKTL 249

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGML- 111
             +P+AS +AI L+  + +WDP KRPTA++AL+H +F+      P    + A  T  + +  
Sbjct:   250 IPNASSEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGPSAHHLDAKQTLHKQLQP 309

Query:   112 -KQQGAGIEAEALPNPNIAKQ 131
              + + +  E +  P PNI  Q
Sbjct:   310 PEPKPSSSERDPKPLPNILDQ 330

GO:0001750 "photoreceptor outer segment" evidence=ISO;ISS

GO:0001917 "photoreceptor inner segment" evidence=ISO;ISS

GO:0003713 "transcription coactivator activity" evidence=ISO;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=ISO;ISS

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;ISS

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0030496 "midbody" evidence=ISO;ISS

GO:0045494 "photoreceptor cell maintenance" evidence=ISO;ISS

GO:0046777 "protein autophosphorylation" evidence=ISO;ISS

GO:0072686 "mitotic spindle" evidence=ISO;ISS

UNIPROTKB|P20793 Mak "Serine/threonine-protein kinase MAK" [Rattus norvegicus (taxid:10116)]

 Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 52/141 (36%), Positives = 78/141 (55%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
             MAEL  FRPLF GT E ++++KIC VLG P    W +  +L  +M         +NL  L
Sbjct:   190 MAELYTFRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCIPINLKTL 249

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGML- 111
             +P+AS +AI L+  + +WDP KRPTA++AL+H +F+      P    + A  T  + +  
Sbjct:   250 IPNASSEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGPSAHHLDAKQTLHKQLQP 309

Query:   112 -KQQGAGIEAEALPNPNIAKQ 131
              + + +  E +  P PNI  Q
Sbjct:   310 PEPKPSSSERDPKPLPNILDQ 330

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q2YDJ7 MAK "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 218 (81.8 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 57/174 (32%), Positives = 89/174 (51%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
             MAEL   RPLF GT E ++++KIC VLG P    W +  +L  +M         +NL  L
Sbjct:   190 MAELYTLRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCVPINLKTL 249

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPP---HIRSVPAVATTTRG 109
             +P+AS +AI L+  + +WDP KRPTA++AL+H +F+      P   H+ S   +    + 
Sbjct:   250 IPNASNEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGPSSHHLESKQPLNKLVQP 309

Query:   110 MLKQQGAGIEAEALPNPNIAKQLS-PLDIIMVVQPKNSVKKQKYYTASGRKGQH 162
              L+ + +  + E  P P+I  Q + P  +    QP  S++  +         QH
Sbjct:   310 -LEPKPSAADPEPQPLPDINDQAAGPPQLKNSHQPLRSIQPPQNVGVQPAPKQH 362

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

MGI|MGI:96913 Mak "male germ cell-associated kinase" [Mus musculus (taxid:10090)]

 Score = 223 (83.6 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 52/141 (36%), Positives = 77/141 (54%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
             MAEL  FRPLF GT E ++++KIC VLG P    W +  +L  +M         +NL  L
Sbjct:   190 MAELYTFRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCIPINLKTL 249

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK--RCLYAPPHIRSVPAVATTTRGM 110
             +P+AS +AI L+  + +WDP KRPTA++AL+H +F+  + L +  H              
Sbjct:   250 IPNASSEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGSSAHHLDTKQTLHKQLQP 309

Query:   111 LKQQGAGIEAEALPNPNIAKQ 131
             L+ + +  E +  P PNI  Q
Sbjct:   310 LEPKPSSSERDPKPLPNILDQ 330

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IDA

GO:0001917 "photoreceptor inner segment" evidence=ISO

GO:0003713 "transcription coactivator activity" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030496 "midbody" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0045494 "photoreceptor cell maintenance" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0072686 "mitotic spindle" evidence=ISO

GO:2001141 "regulation of RNA biosynthetic process" evidence=ISO

UNIPROTKB|E2RE89 MAK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 221 (82.9 bits), Expect = 2.4e-17, P = 2.4e-17
 Identities = 55/156 (35%), Positives = 84/156 (53%)

Query:     1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
             MAEL   RPLF GT E ++++KIC VLG P    W +  +L  +M         +NL  L
Sbjct:   190 MAELYTLRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCVPINLKTL 249

Query:    53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK--RCLYAPPHIRSVPAVATTTRGM 110
             +P+AS +AI L+  + +WDP KRPTA++AL+H +F+  + L    H   +          
Sbjct:   250 IPNASNEAIQLMTEMLNWDPKKRPTASQALKHQYFQVGQVLGPSSHHPELKQSLNKQVQP 309

Query:   111 LKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNS 146
             L+ + + ++ E+ P P+I  Q      +   QPKNS
Sbjct:   310 LESKPSLVDLESKPLPDINDQT-----VRQPQPKNS 340

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_III1771	hypothetical protein (453 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pg.C_scaffold_1033000001	hypothetical protein (371 aa)			•						0.407

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	216
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-34
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-21
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-21
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-21
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-19
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	9e-19
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-18
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-16
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	2e-15
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-15
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-15
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	5e-15
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-14
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-14
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-13
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-13
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	7e-13
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-12
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-12
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-12
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-12
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-12
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	6e-12
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-12
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	6e-12
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-12
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-11
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	6e-11
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-10
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-09
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-09
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	5e-09
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	5e-09
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-08
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-08
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-08
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-07
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-07
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-07
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-07
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	8e-07
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-06
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-06
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	5e-06
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	9e-06
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	3e-04
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	4e-04
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	7e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	0.001
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.001

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  121 bits (307), Expect = 8e-34
 Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 8/95 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM------LSGVNLSEL 52
           MAEL   RPLF G+ E +Q+YKICSVLG PT   W +  +L   +       +  +L +L
Sbjct: 189 MAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQL 248

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +P+AS +AI+LI+ +  WDP KRPTA++ALQH +F
Sbjct: 249 IPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 89.9 bits (224), Expect = 1e-21
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 10/96 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--------ELRQAMLSGVNLSEL 52
            AELLL  P   G  + +Q+ KI   LG PT ++W          E +        L ++
Sbjct: 193 FAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPF--PPTPLKQI 250

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            P+AS DA++L++ L + +P KR TA +AL+H +F 
Sbjct: 251 FPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 89.1 bits (222), Expect = 2e-21
 Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 7/94 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELR--QAMLS---GVNLSELM 53
            AE++  +PLF G  E +Q++KI  +LG PT +SW    +L   +         +L +++
Sbjct: 189 FAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVL 248

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           P    + I+L+  +  ++P KR +A EAL+H +F
Sbjct: 249 PRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 89.1 bits (222), Expect = 3e-21
 Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 9/97 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS---------GVNLSE 51
            AELL  +PLF G D  +Q+  I  VLG P+ +       +   +            LS+
Sbjct: 197 FAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSK 256

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           L P AS +AI+L+E +  +DP KR TA EAL H +  
Sbjct: 257 LFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLA 293

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 83.9 bits (208), Expect = 2e-19
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 10/96 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS---------GVNLSE 51
            AELL  RPLF G  E +Q++KI   LG P  + W  +      +         G+ L +
Sbjct: 189 FAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVW-PKFTSLARNYKFSFPKKAGMPLPK 247

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           L P+AS  A++L+  +  +DP KR TA +AL H +F
Sbjct: 248 LFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 82.6 bits (205), Expect = 9e-19
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLS------GVNLSE 51
           + E+LL +PLF GT    Q+ KI  V+G P+   ++S        ML          L E
Sbjct: 203 LGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDE 262

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L+P AS DA++L++ L  ++P KR TA EAL+H +  +
Sbjct: 263 LLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 81.1 bits (201), Expect = 2e-18
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 13/98 (13%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--ADELRQAMLSGVNLSELMPS--- 55
           +AEL L +P+FQG+ E EQ+ KI  + G+PT ++W    +L       +   +       
Sbjct: 192 LAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN--LKPKKPYKRRLR 249

Query: 56  ------ASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
                     A++L++ L + DP KR +A +ALQH +F
Sbjct: 250 EFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 5/92 (5%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADE---LRQAMLS--GVNLSELMPS 55
            AEL   RPLF+GT EA+Q+ KI  V+G P+ + W       R +  S    +    +P 
Sbjct: 196 FAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPE 255

Query: 56  ASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             ++ ++L++ + +++P KR +A EALQH +F
Sbjct: 256 ICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 73.6 bits (181), Expect = 2e-15
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 6/94 (6%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML------SGVNLSELMP 54
            AELL  +PLF G +E +Q+ +I  +LG P  D+W    +  +          +L  + P
Sbjct: 224 FAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFP 283

Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +AS DAI+L++SL   +P +R +A EAL+H +FK
Sbjct: 284 NASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317

Length = 335

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--------ADELRQAMLSGVNLSEL 52
            AELL   PLF G ++ EQ+  +   LG P  ++W         +++       + L E+
Sbjct: 191 FAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEI 250

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
            P AS +A++L++ L  +DP KR +AAEAL+H +F
Sbjct: 251 FPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 24/111 (21%)

Query: 1   MAELLLFRPLFQGTDE---------AEQMYKICSVLGNPTMDSWAD-----ELRQAMLS- 45
            AELL   P+F+G +           +Q+ +I  VLG PT   W D     E    M   
Sbjct: 206 FAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDF 265

Query: 46  ------GVNLS---ELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
                   +L+   E          +L+  L  +DP KR TA EAL+H +F
Sbjct: 266 KTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 7/92 (7%)

Query: 3   ELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS-------GVNLSELMPS 55
           E+L   PLF GT+E +Q+ KI  VLG P  +      +   ++       G  L +L+P+
Sbjct: 191 EILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPN 250

Query: 56  ASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           AS + ++L++ L ++DP +R TA +AL+H +F
Sbjct: 251 ASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAMLS------GVNLSEL 52
            AELL  +PLF G  E +Q+ KI  +LG PT   W    EL  A            L + 
Sbjct: 197 FAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKK 256

Query: 53  MPSASKD--AINLIESLCSWDPCKRPTAAEALQHLFF 87
            P+ S      +L+  L ++DP KR +A +AL+H +F
Sbjct: 257 FPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 68.9 bits (169), Expect = 7e-14
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW-------ADELRQA--MLSGVNLSE 51
           +AE+L  RPLF G D   Q+  I  VLG P+ +         A    ++      V  ++
Sbjct: 200 LAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNK 259

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
           L P+A   A++L++ + +++P KR T  EAL H
Sbjct: 260 LFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 19/102 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGV------------- 47
           MAELL  + LF G+D  +Q+ +I +++G P      +EL Q + S               
Sbjct: 206 MAELLTGKTLFPGSDHIDQLKRIMNLVGTPD-----EELLQKISSESARNYIQSLPQMPK 260

Query: 48  -NLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            +  E+   A+  AI+L+E +   DP KR TAAEAL H +  
Sbjct: 261 KDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 66.2 bits (162), Expect = 4e-13
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELM 53
            AE++  RPLF G  E +Q+++I   LG P  D W       + +      +  +LS+++
Sbjct: 190 FAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVV 249

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           P+  +D ++L+  +  +DP KR +A  ALQH +F
Sbjct: 250 PNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 65.7 bits (161), Expect = 5e-13
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 15/87 (17%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + ELL  +P F G +  +Q+  I  +LG P                        S S++A
Sbjct: 189 LYELLTGKPPFSGENILDQLQLIRRILGPPLEFDE---------------PKWSSGSEEA 233

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFF 87
            +LI+   + DP KRPTA E LQH +F
Sbjct: 234 KDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 65.6 bits (160), Expect = 7e-13
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 7/94 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQA--MLSGVNLSELM 53
           MAE++  RPLF GT+  +Q+ KI  ++G PT  +W       E +         +L +L 
Sbjct: 191 MAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLF 250

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           P A    I+L+  L   +P  R +A +ALQH +F
Sbjct: 251 PHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 9/95 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA--------DELRQ-AMLSGVNLSE 51
           +AELL  +P+F+G D  +Q+ +I  VLG P  ++ +        + +R    +       
Sbjct: 200 LAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFES 259

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLF 86
           + P+A+  A++L+E L ++DP KR +  EAL+H +
Sbjct: 260 IFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 9/95 (9%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW----ADELRQAMLS-----GVNLSEL 52
           AELL  +PLF G D   Q+  I  +LG+P+ +       ++ R+ + S       + + L
Sbjct: 200 AELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARL 259

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
            P A+  AI+L+E +  +DP KR T  EAL H + 
Sbjct: 260 FPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL 294

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMD----SWADELRQAMLS-----GVNLSEL 52
           AE+L  R LF G +   Q+  I SVLG+P+ +      +D +R+ + +      V  S++
Sbjct: 203 AEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKI 262

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
            P AS +A++L+  +  +DP +R T  +ALQH F  +
Sbjct: 263 FPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 63.6 bits (155), Expect = 4e-12
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 7/93 (7%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQ-----AMLSGVNLSELMP 54
           AE+   +PLF G  E +Q+++I  +LG PT D W     L             +L   + 
Sbjct: 193 AEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVK 252

Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +  +D ++L+E +  +DP KR +A +AL H +F
Sbjct: 253 NLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 63.2 bits (154), Expect = 5e-12
 Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 12/98 (12%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD----------ELRQAMLSGVNLS 50
           +AELL  +PL  G  E EQ+  I  +LG P    W             L +   +  NL 
Sbjct: 199 LAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYN--NLK 256

Query: 51  ELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
              P  S+  + L+  L  +DP KR TA EAL+  +FK
Sbjct: 257 HKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 63.1 bits (154), Expect = 6e-12
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--ADEL--RQAMLSGVN----LSEL 52
            AE+   RP+ QG  + +Q++ I  + G PT ++W     L   + + S  N    L E 
Sbjct: 217 FAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEER 276

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
                 + ++L+  L S DP KR TA++AL+H +F
Sbjct: 277 FGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 62.5 bits (153), Expect = 6e-12
 Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 18/87 (20%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + ELL  +P F G D+  +++K       P                          S +A
Sbjct: 186 LYELLTGKPPFPGDDQLLELFKKI-GKPKPPFPPP-----------------EWDISPEA 227

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFF 87
            +LI  L   DP KR TA EALQH FF
Sbjct: 228 KDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 63.4 bits (154), Expect = 6e-12
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 9/97 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA----DELRQAM-----LSGVNLSE 51
           MAE+L  +PLF+G D  +Q+ +I  V G P+ +       ++ +  +         +   
Sbjct: 206 MAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRS 265

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           L+P+A+  A+N++E +   D   R TAAEAL H +F+
Sbjct: 266 LLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFE 302

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 63.3 bits (154), Expect = 7e-12
 Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 14/115 (12%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN---------LSEL 52
           AE+L  +PLF G D   Q   I  +LG P  D       +  L  V           SE 
Sbjct: 197 AEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEK 256

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTT 107
             +A   AI+L+E +  +DP KR +AAEAL H +      AP H  +   VA   
Sbjct: 257 FKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL-----APYHDPTDEPVAEEK 306

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 62.5 bits (152), Expect = 1e-11
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 9/96 (9%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA---DELRQAMLSG------VNLSEL 52
           AE+L  +PLF G +   Q+  I  +LG P+ ++ +   +E  +  LS       V  S+ 
Sbjct: 199 AEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQK 258

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            P+A   A+ L+E L ++DP  RPTA EAL   +FK
Sbjct: 259 FPNADPLALRLLERLLAFDPKDRPTAEEALADPYFK 294

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 60.2 bits (146), Expect = 6e-11
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELMP 54
           AE++  +PLF G  E ++++KI  +LG P  ++W       + + A       +L+ ++P
Sbjct: 195 AEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVP 254

Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +     ++L+  +   DP KR TA  AL+H +FK
Sbjct: 255 TLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288

Length = 294

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 57.9 bits (140), Expect = 4e-10
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQ----AMLSGVNLSELMPS 55
           AE+   +PLF G  E +Q+  I  +LG PT   W    +LR           +LS  +P 
Sbjct: 203 AEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPD 262

Query: 56  ASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
            S + ++L++ +  +DP KR +A  AL H +F
Sbjct: 263 LSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMP------ 54
           MAELL   PLF G  + +Q+Y I   LG                +GV   E         
Sbjct: 192 MAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLER 251

Query: 55  ----SASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
                 S  A++ +++    DP +R T  E LQH +F
Sbjct: 252 RYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)

Query: 8   RPLFQGTDEAEQMYKICSVLGNPTMDSW------ADELRQAMLSGV-NLSELMPSASKDA 60
           RPLF G D  +Q+ +I  +LG PT +SW       D     M     +L  ++P  +   
Sbjct: 198 RPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTG 257

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFF 87
            +L+++L   +P +R +A EALQH +F
Sbjct: 258 RDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 55.0 bits (132), Expect = 5e-09
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 13/125 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-------SWADELRQAMLSGVNLSELM 53
           +AE++L  P+F G    +Q+ +I  VLG PT D       ++AD ++   +   +L ++ 
Sbjct: 261 IAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYAD-IKFPDVKPKDLKKVF 319

Query: 54  PSAS-KDAINLIESLCSWDPCKRPTAAEALQHLFFKR----CLYAPPHIRSVPAVATTTR 108
           P  +  DAIN I     ++P KR    EAL   FF      C+  P +I  +P +     
Sbjct: 320 PKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLPDLFNFCD 379

Query: 109 GMLKQ 113
             +K+
Sbjct: 380 AEIKE 384

Length = 440

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 54.8 bits (132), Expect = 5e-09
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 12/99 (12%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKIC-SVLGNPTMDSWADELRQAMLSGVN---------LS 50
            AE+L  +PLF G  E EQM  I  SV      D   +EL   + S V          L 
Sbjct: 209 FAEMLTGKPLFAGAHELEQMQLILESVPVVREEDR--NELLNVIPSFVRNDGGEPRRPLR 266

Query: 51  ELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           +L+P  + +A++ +E + +++P  R TA EAL H +   
Sbjct: 267 DLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLSGVNLSELMPS-- 55
            AELL  R LFQ     +Q+  I  +LG P+   M S  +  R  +L G +    +P   
Sbjct: 195 FAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLY 254

Query: 56  -----ASKDAINLIESLCSWDPCKRPTAAEALQH 84
                A+ +A++L+  +  +DP KR +AA+AL H
Sbjct: 255 TLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--ADELRQAMLS-----GVNLSELMP 54
           AE++  R LF G  E +Q+++I   LG P    W     L     S       + S+++P
Sbjct: 192 AEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVP 251

Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
              +D  +L+  +  +DP KR +A  AL H FF
Sbjct: 252 PLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 52.6 bits (126), Expect = 3e-08
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 9/96 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP-------TMDSWADELRQAM--LSGVNLSE 51
           MAE+L  + LF+G D  +Q+ +I  V G P         D  A    +++      + S 
Sbjct: 205 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFST 264

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           L P AS  A++L+E +   D  KR TA EAL+H +F
Sbjct: 265 LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN--------LSEL 52
           + EL   +P+FQ   E  Q+  I  + G+P    W D ++    + +         L E 
Sbjct: 208 LGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE 267

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLF 86
                  A++L++ + + DP KR TA EAL   +
Sbjct: 268 FSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD----------ELRQAMLSGVNLS 50
           MAE+    P+ QG  E  Q+  I  + G+ T + W            EL Q     V   
Sbjct: 214 MAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKER 273

Query: 51  ELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
                    A++LI+ L   DP KR  A  AL H FF
Sbjct: 274 LKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 208 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 265

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 266 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 11/94 (11%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLS--------ELM 53
           AE+   +PLF G  EA+Q+ KI  ++G P  D W    R   L     S         ++
Sbjct: 198 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP---RDVTLPRGAFSPRGPRPVQSVV 254

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           P   +    L+  + +++P KR +A  ALQH FF
Sbjct: 255 PEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 48.9 bits (117), Expect = 4e-07
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSE---------L 52
            E+L   PLF G  + +Q+Y I   LGN          +  + +G+ L E          
Sbjct: 192 TEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKR 251

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
            P  S   ++L +     DP  RP++++ L H FF
Sbjct: 252 FPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 48.1 bits (114), Expect = 8e-07
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 3   ELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN--------LSELMP 54
           E+   RPLF G+   EQ++ I  +LG PT ++W   L        N        L    P
Sbjct: 197 EMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAP 256

Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
               D   L+  L  ++  KR +A EA++H +F
Sbjct: 257 RLDSDGAELLSKLLQFEGRKRISAEEAMKHPYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 3   ELLLFRPLFQG-TDEAEQMYKICSVLGNPTMDSWA--------DELRQAMLSGVNLSELM 53
           E+   RPLF G TD  +Q++KI  VLG PT ++W                     L    
Sbjct: 196 EMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHA 255

Query: 54  PSASK--DAINLIESLCSWDPCKRPTAAEALQHLFF 87
           P   +      L      ++P KR +AAEA++H +F
Sbjct: 256 PRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 46.2 bits (109), Expect = 4e-06
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 3   ELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA-----DELRQAMLS---GVNLSELMP 54
           E+   RP+F G+   E+++ I  +LG PT ++W      +E R  +        L    P
Sbjct: 196 EMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAP 255

Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
               D I+L+ SL  ++   R +A  AL+H +F
Sbjct: 256 RLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 46.2 bits (109), Expect = 4e-06
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 9/96 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD---SWADELRQAMLSGV------NLSE 51
           MAELL  + LF G D  +Q+ +I  V+G P+ +     + E  +  +  +      +L +
Sbjct: 206 MAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKK 265

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  AI+L+E +   D  KR +A+EAL H +F
Sbjct: 266 IFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYF 301

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 45.8 bits (108), Expect = 5e-06
 Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 5/91 (5%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---RQAMLS--GVNLSELMPSA 56
           AE+   +PLF+G+ + +Q+ KI  V+G P  + W  ++   RQA  S     + + +   
Sbjct: 200 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI 259

Query: 57  SKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
            +   +L+    +++P KR +A  AL H +F
Sbjct: 260 DELGKDLLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 45.0 bits (106), Expect = 9e-06
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 11/107 (10%)

Query: 3   ELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA-----DELRQAMLSGVNLSELM---P 54
           E+   RPLF G+   ++++ I  +LG PT ++W      DE +           L+   P
Sbjct: 197 EMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAP 256

Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVP 101
               + I L+     ++  KR +A EA++H +F+        I S+P
Sbjct: 257 RLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL---GTRIHSLP 300

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 28/125 (22%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM---------LSGVNLSE 51
           M E++    LF GTD  +Q  KI   LG P+ D +   L+  +          +G +  E
Sbjct: 207 MGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS-DEFMSRLQPTVRNYVENRPKYAGYSFEE 265

Query: 52  LMPSA-------------SKDAINLIESLCSWDPCKRPTAAEALQHLFFK-----RCLYA 93
           L P               +  A +L+  +   DP KR +  +ALQH +         + A
Sbjct: 266 LFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSEVEA 325

Query: 94  PPHIR 98
           PP   
Sbjct: 326 PPPAP 330

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 21/121 (17%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLS-----GVNLSEL 52
           M EL+    +FQGTD  +Q  K+   LG P+   M+     +R  + +     G++  EL
Sbjct: 212 MGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEEL 271

Query: 53  MPS------------ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSV 100
            P              +  A +L+  +   DP KR +  EAL+H +     Y P    + 
Sbjct: 272 FPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI-TVWYDPAEAEAP 330

Query: 101 P 101
           P
Sbjct: 331 P 331

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 27/104 (25%)

Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGN--PTMDSWADELRQAMLSGVN----------- 48
           AELL  +PL+ G  + +Q+Y I   LG+  P         R   +   N           
Sbjct: 192 AELLTGQPLWPGKSDVDQLYLIRKTLGDLIP---------RHQQIFSTNQFFKGLSIPEP 242

Query: 49  -----LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
                L    P+ S  A++ ++     DP +R +  E L+H +F
Sbjct: 243 ETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 38.6 bits (91), Expect = 0.001
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 23/82 (28%)

Query: 3   ELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSA-SKDAI 61
           EL   +  F+G +  E   KI    G                        +PS  S +  
Sbjct: 195 ELCTLKHPFEGENLLELALKILK--GQYPP--------------------IPSQYSSELR 232

Query: 62  NLIESLCSWDPCKRPTAAEALQ 83
           NL+ SL   DP +RP+ A+ LQ
Sbjct: 233 NLVSSLLQKDPEERPSIAQILQ 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 39.0 bits (89), Expect = 0.001
 Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 15/99 (15%)

Query: 1   MAELLLFRPLFQGTDEA---EQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSAS 57
           + ELL   P F+G   +    Q  KI   L  P++ S                      S
Sbjct: 201 LYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLS------------PSNPELIS 248

Query: 58  KDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPH 96
           K A +L++ L + DP  R +++  L H            
Sbjct: 249 KAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESD 287

Length = 384

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	216
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.79
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.77
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.77
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.76
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.68
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.61
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.57
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.56
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.53
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.48
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.47
PTZ00036	440	glycogen synthase kinase; Provisional	99.42
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.39
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.35
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.33
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.33
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.32
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.29
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.25
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.25
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.23
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.23
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.22
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.21
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.21
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.21
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.2
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.2
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.17
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.17
PTZ00284	467	protein kinase; Provisional	99.17
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.14
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.13
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.12
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.11
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.11
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.11
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.11
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.11
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.11
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.1
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.09
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.09
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.09
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.09
KOG0605	550	consensus NDR and related serine/threonine kinases	99.07
PLN00009	294	cyclin-dependent kinase A; Provisional	99.07
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.06
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.05
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.03
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.03
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.03
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.03
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.02
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.02
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.02
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.01
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.99
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.98
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.96
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.96
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.95
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.91
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.9
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.89
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.89
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.89
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.88
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.86
KOG0610	459	consensus Putative serine/threonine protein kinase	98.86
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.86
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.85
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.85
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.84
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.83
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.83
PHA03212	391	serine/threonine kinase US3; Provisional	98.79
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.78
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.78
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.75
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.75
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.74
PHA03207	392	serine/threonine kinase US3; Provisional	98.72
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.71
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.69
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.68
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.67
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.67
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.66
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.66
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.65
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.64
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.61
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.61
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.6
KOG0575	592	consensus Polo-like serine/threonine protein kinas	98.6
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.6
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.6
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.57
KOG0578	550	consensus p21-activated serine/threonine protein k	98.56
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	98.56
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.55
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.55
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.54
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.54
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.53
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.53
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.53
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.53
PHA03209	357	serine/threonine kinase US3; Provisional	98.53
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.52
KOG0198	313	consensus MEKK and related serine/threonine protei	98.52
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.52
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.51
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.51
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.51
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.51
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.5
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.5
PHA03210	501	serine/threonine kinase US3; Provisional	98.48
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.48
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.48
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.47
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.47
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.47
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.46
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.46
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.45
KOG0581	364	consensus Mitogen-activated protein kinase kinase	98.45
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.45
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.45
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.45
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.45
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.45
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.45
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.44
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.44
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.44
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.44
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.43
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.43
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.42
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.42
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.42
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.42
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.42
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.41
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.41
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.41
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.41
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.41
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.41
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.4
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.4
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.4
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.39
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.38
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.38
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.38
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.37
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.37
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	98.36
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.36
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.36
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.35
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.35
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.35
PHA03211	461	serine/threonine kinase US3; Provisional	98.35
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.34
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.34
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.33
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.33
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.32
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.32
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.32
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.32
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.32
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.31
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.3
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.3
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.3
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.29
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.29
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.29
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.28
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.28
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.27
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.27
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.26
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.26
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.26
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.26
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.25
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.24
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.23
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.23
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.23
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.22
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.21
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.21
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.2
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.2
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.2
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	98.19
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.19
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.18
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.18
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.18
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.18
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.17
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.17
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.16
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.16
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.15
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.14
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.14
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.14
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.14
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.12
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.11
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.11
PTZ00283	496	serine/threonine protein kinase; Provisional	98.11
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.11
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.1
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.1
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.1
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.09
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.09
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.09
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.08
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.07
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.07
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.07
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.07
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.06
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.05
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.05
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.03
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.03
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.02
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.02
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.01
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	97.99
PTZ00267	478	NIMA-related protein kinase; Provisional	97.99
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	97.98
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	97.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	97.94
KOG0582	516	consensus Ste20-like serine/threonine protein kina	97.94
PHA02988	283	hypothetical protein; Provisional	97.92
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	97.92
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.87
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	97.86
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	97.85
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	97.84
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	97.84
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	97.82
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	97.71
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	97.69
KOG0201	467	consensus Serine/threonine protein kinase [Signal	97.68
KOG0589	426	consensus Serine/threonine protein kinase [General	97.55
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	97.54
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	97.52
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	97.5
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	97.49
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	97.48
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.48
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	97.48
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	97.47
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	97.47
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	97.44
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	97.43
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	97.43
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	97.43
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	97.43
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	97.42
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	97.42
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	97.39
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	97.37
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	97.37
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	97.36
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	97.35
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	97.33
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	97.32
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	97.32
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	97.3
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	97.3
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	97.3
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	97.29
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	97.29
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	97.29
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	97.28
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	97.28
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	97.27
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	97.25
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	97.24
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	97.23
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	97.23
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	97.23
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	97.22
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.22
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	97.21
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	97.21
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	97.2
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	97.2
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	97.19
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	97.19
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	97.18
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.15
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	97.15
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	97.13
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	97.12
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	97.12
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	97.11
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	97.1
PLN00181	793	protein SPA1-RELATED; Provisional	97.1
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	97.1
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	97.1
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	97.07
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	97.06
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	97.06
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	97.06
KOG0695	593	consensus Serine/threonine protein kinase [Signal	97.04
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	97.02
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	96.99
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	96.97
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	96.94
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	96.94
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	96.93
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	96.93
KOG0584	632	consensus Serine/threonine protein kinase [General	96.92
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	96.91
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	96.89
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	96.88
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	96.85
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	96.84
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	96.83
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	96.82
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	96.81
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	96.77
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	96.75
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	96.74
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	96.71
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	96.7
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	96.69
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	96.69
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	96.69
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	96.56
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	96.5
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	96.43
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	96.43
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	96.43
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	96.4
PHA02882	294	putative serine/threonine kinase; Provisional	96.35
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	96.34
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	96.34
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.26
KOG0590	601	consensus Checkpoint kinase and related serine/thr	96.21
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	96.18
KOG0611	668	consensus Predicted serine/threonine protein kinas	96.14
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	96.02
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	95.99
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	95.92
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	95.88
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	95.86
KOG0586	596	consensus Serine/threonine protein kinase [General	95.67
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	95.56
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	95.41
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	95.32
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	95.2
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	95.04
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	94.68
KOG0577	948	consensus Serine/threonine protein kinase [Signal	94.66
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	94.62
KOG0192	362	consensus Tyrosine kinase specific for activated (	94.62
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	93.85
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	93.81
KOG0606	1205	consensus Microtubule-associated serine/threonine	93.42
KOG0595	429	consensus Serine/threonine-protein kinase involved	93.1
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	93.02
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	92.89
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	92.24
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	91.9
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	91.51
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	90.56
KOG1989	738	consensus ARK protein kinase family [Signal transd	90.32
KOG0576	829	consensus Mitogen-activated protein kinase kinase	86.85
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	86.09
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	82.99

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=1.1e-19  Score=158.34  Aligned_cols=99  Identities=33%  Similarity=0.501  Sum_probs=87.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHH---------hhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---------RQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~---------~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      |+||++|+|||+|.+..+||..|++++|+|+++.+....         +++..++.++..+|++++++|+|||.+||++|
T Consensus       218 ~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fd  297 (359)
T KOG0660|consen  218 LAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFD  297 (359)
T ss_pred             HHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccC
Confidence            579999999999999999999999999999998776543         45688899999999999999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCCCCCCCCCCCCc
Q 042950           72 PCKRPTAAEALQHLFFKRCLYAPPHIRSVP  101 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~~~~~~~~~~~~  101 (216)
                      |.+|+||+|||+||||..  |..+...+.+
T Consensus       298 P~kRita~eAL~hPYl~~--~hdp~dEP~~  325 (359)
T KOG0660|consen  298 PKKRITAEEALAHPYLAP--YHDPEDEPVC  325 (359)
T ss_pred             ccccCCHHHHhcChhhhh--hcCCccCCCC
Confidence            999999999999999998  4544444433

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.77  E-value=2.2e-19  Score=151.60  Aligned_cols=91  Identities=38%  Similarity=0.659  Sum_probs=85.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc------cccCCCccccCCCCCHHHHHHHHhccccCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA------MLSGVNLSELMPSASKDAINLIESLCSWDPCK   74 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k   74 (216)
                      ++||+.|.|+|+|++++|||..|+..||+|.++.|+++..++      .++..++..+|+.++.+++|||.+||.|||.+
T Consensus       192 ~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~  271 (318)
T KOG0659|consen  192 FAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKK  271 (318)
T ss_pred             HHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchh
Confidence            589999999999999999999999999999999999998887      46777788899999999999999999999999


Q ss_pred             CCCHHHHHcCccccCCC
Q 042950           75 RPTAAEALQHLFFKRCL   91 (216)
Q Consensus        75 R~ta~eaL~HpfF~~~~   91 (216)
                      |+||.|||+|+||++.+
T Consensus       272 Rita~qaL~~~yf~~~P  288 (318)
T KOG0659|consen  272 RITASQALKHPYFKSLP  288 (318)
T ss_pred             cccHHHHhcchhhhcCC
Confidence            99999999999999844

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.77  E-value=6.2e-19  Score=153.99  Aligned_cols=125  Identities=27%  Similarity=0.388  Sum_probs=106.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh------hccccCCCccc-cCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR------QAMLSGVNLSE-LMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~------~~~~~~~~l~~-~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      ++||+.|+|+|+|++..+||..|++++|+|+.+++..+..      .+.+....|.+ ++...+++++||+.++|+|+|.
T Consensus       216 ~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~  295 (364)
T KOG0658|consen  216 MAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPS  295 (364)
T ss_pred             HHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChh
Confidence            5899999999999999999999999999999999876543      34777778877 4567999999999999999999


Q ss_pred             CCCCHHHHHcCccccCCCCCCCCCCCCccccchhhhhhhhhccccCCcCCCCCCCCCCCCHHHhhhccCchhhhh
Q 042950           74 KRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSVK  148 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~el~~~~q~~k~~~  148 (216)
                      +|++|.|||.||||++       ++...               .+++++.+.++ +|+|...++...++....|.
T Consensus       296 ~R~~~~~~l~h~fFde-------lr~~~---------------~~l~~g~~lp~-lf~f~~~e~~~~~~~~~~l~  347 (364)
T KOG0658|consen  296 KRLSALEALAHPFFDE-------LRDPN---------------TKLPNGRPLPP-LFNFKRAELGISPELVNVLI  347 (364)
T ss_pred             hcCCHHHHhcchhhHH-------hhCcC---------------ccCcCCCcCCC-ccCchHHHhccchHHHHhhc
Confidence            9999999999999999       44443               46667776665 99999999998888765554

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=7e-19  Score=158.04  Aligned_cols=98  Identities=49%  Similarity=0.822  Sum_probs=88.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +||+++.+|||+|.++.|||.+|+++||+|..+.|..+.++.        ...+.++..+++.++.++++||.+||.|||
T Consensus       200 ~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP  279 (538)
T KOG0661|consen  200 MAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDP  279 (538)
T ss_pred             HHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999999999876654        678889999999999999999999999999


Q ss_pred             CCCCCHHHHHcCccccCCCCCCCCCC
Q 042950           73 CKRPTAAEALQHLFFKRCLYAPPHIR   98 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~~~~~~~~~   98 (216)
                      ++||||.+||+||||+.........+
T Consensus       280 ~kRpTA~~al~~pffq~~~~~~~~a~  305 (538)
T KOG0661|consen  280 DKRPTASQALQHPFFQVGRASGSSAR  305 (538)
T ss_pred             ccCccHHHHhcCcccccccccccccc
Confidence            99999999999999997655543333

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.68  E-value=2.5e-17  Score=142.99  Aligned_cols=92  Identities=33%  Similarity=0.552  Sum_probs=80.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccc--------cCCCccccCCC--CCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML--------SGVNLSELMPS--ASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~--------~~~~l~~~~~~--~s~~~~dLL~~mL~~   70 (216)
                      ++||++++|||+|.++.|||.+|+.+||+|++..|+.+..++.+        +-..+...|+.  +++.+.|||.++|.|
T Consensus       268 ~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~  347 (419)
T KOG0663|consen  268 FAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTY  347 (419)
T ss_pred             HHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhcc
Confidence            57999999999999999999999999999999999988777722        23345556665  459999999999999


Q ss_pred             CCCCCCCHHHHHcCccccCCCC
Q 042950           71 DPCKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF~~~~~   92 (216)
                      ||.+|+||+|+|+|.||.+.+.
T Consensus       348 dP~kR~tA~~~L~h~~F~e~P~  369 (419)
T KOG0663|consen  348 DPGKRITAEDGLKHEYFRETPL  369 (419)
T ss_pred             CccccccHHHhhcccccccCCC
Confidence            9999999999999999998543

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.61  E-value=6e-16  Score=140.08  Aligned_cols=90  Identities=38%  Similarity=0.518  Sum_probs=80.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      |+||++|+|+|+|.++++||.+|+++||.|++..|+ ..++|        ...+..+.+.|..++..+++||.+||.+||
T Consensus       310 l~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP  388 (560)
T KOG0600|consen  310 LAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDP  388 (560)
T ss_pred             HHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCc
Confidence            579999999999999999999999999999999999 66666        223456777788899999999999999999


Q ss_pred             CCCCCHHHHHcCccccCCC
Q 042950           73 CKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~~   91 (216)
                      .+|.||.+||+|+||+..+
T Consensus       389 ~kR~tA~~aL~seyF~t~p  407 (560)
T KOG0600|consen  389 DKRGTASSALQSEYFTTEP  407 (560)
T ss_pred             cccccHHHHhcCcccccCC
Confidence            9999999999999996543

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.57  E-value=3e-15  Score=128.85  Aligned_cols=89  Identities=26%  Similarity=0.337  Sum_probs=78.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc---------cccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA---------MLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~---------~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ++||++|.|||+|.+++|||+.|.+.||...+....-+.+.+         .....+++..+++++..++||+++||.+|
T Consensus       192 ~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~d  271 (396)
T KOG0593|consen  192 FAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMD  271 (396)
T ss_pred             HHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCC
Confidence            479999999999999999999999999997777665554444         33456788889999999999999999999


Q ss_pred             CCCCCCHHHHHcCccccC
Q 042950           72 PCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~   89 (216)
                      |++|++++++|.|+||+.
T Consensus       272 P~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  272 PDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             ccccccHHHHhcChHHHH
Confidence            999999999999999976

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.56  E-value=1.6e-15  Score=132.05  Aligned_cols=91  Identities=33%  Similarity=0.614  Sum_probs=81.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccc-------c-CCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------S-GVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~-------~-~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      ++||+++++||+|.++.+|+..|++++|+|+++.|+....++.+       . +..+....+..++++.||+.+||+|||
T Consensus       211 faEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p  290 (323)
T KOG0594|consen  211 FAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDP  290 (323)
T ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCc
Confidence            47999999999999999999999999999999999998877722       2 556666777788999999999999999


Q ss_pred             CCCCCHHHHHcCccccCCC
Q 042950           73 CKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~~   91 (216)
                      .+|+||..||.|+||.+..
T Consensus       291 ~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  291 AKRISAKGALTHPYFSELP  309 (323)
T ss_pred             ccCcCHHHHhcChhhcccc
Confidence            9999999999999999853

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.53  E-value=1.3e-14  Score=134.60  Aligned_cols=89  Identities=31%  Similarity=0.491  Sum_probs=70.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc----------------c---------------------
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA----------------M---------------------   43 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~----------------~---------------------   43 (216)
                      +|||++|.|||+|+++.|||..|++++|.|+..++..+.+..                .                     
T Consensus       378 lAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~  457 (586)
T KOG0667|consen  378 LAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLER  457 (586)
T ss_pred             HHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccc
Confidence            689999999999999999999999999999998876543321                0                     


Q ss_pred             -c--cCCCccccCC-CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           44 -L--SGVNLSELMP-SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        44 -~--~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                       .  ....+...+. .....++|||++||.|||.+|+|+.+||+||||+.
T Consensus       458 ~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  458 RGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG  507 (586)
T ss_pred             cCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence             0  0112222233 23456799999999999999999999999999996

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.48  E-value=1.9e-14  Score=124.41  Aligned_cols=90  Identities=36%  Similarity=0.636  Sum_probs=73.9

Q ss_pred             CcccccCCCCCCCCC---------HHHHHHHHHHhhCCCCHHHHHHHHhhcc------------ccCCCccccCC---CC
Q 042950            1 MAELLLFRPLFQGTD---------EAEQMYKICSVLGNPTMDSWADELRQAM------------LSGVNLSELMP---SA   56 (216)
Q Consensus         1 L~ELltG~plF~g~s---------~~dql~~I~~ilG~p~~~~~~~~~~~~~------------~~~~~l~~~~~---~~   56 (216)
                      ++||++..|||.|..         ..||+.+|+++||+|+.+.|+...++|.            +...+|..++.   .-
T Consensus       230 faElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k  309 (438)
T KOG0666|consen  230 FAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVK  309 (438)
T ss_pred             HHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCC
Confidence            479999999998864         3689999999999999999999888871            12223333332   24


Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ++.+.+||.+||+|||.+|+||++||+|+||.+.
T Consensus       310 ~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  310 DPSALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             CchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence            6669999999999999999999999999999984

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.47  E-value=2.9e-14  Score=115.42  Aligned_cols=88  Identities=33%  Similarity=0.572  Sum_probs=78.3

Q ss_pred             cccc-cCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcccc-------CCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            2 AELL-LFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS-------GVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         2 ~ELl-tG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~-------~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      +|+. .|+|||+|.+-.|||.+|+.++|+|+++.|+.+..++.+.       ..+|..+.++.+....|||+++|.-+|.
T Consensus       193 aelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~  272 (292)
T KOG0662|consen  193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPA  272 (292)
T ss_pred             HHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcc
Confidence            3443 4899999999999999999999999999999998887332       3457788888999999999999999999


Q ss_pred             CCCCHHHHHcCccccC
Q 042950           74 KRPTAAEALQHLFFKR   89 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~   89 (216)
                      .|++|+++|+||||.+
T Consensus       273 qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  273 QRISAEAALQHPYFSD  288 (292)
T ss_pred             cccCHHHHhcCccccc
Confidence            9999999999999987

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.42  E-value=3.4e-13  Score=123.17  Aligned_cols=90  Identities=32%  Similarity=0.545  Sum_probs=73.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh------hccccCCCccccCC-CCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR------QAMLSGVNLSELMP-SASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~------~~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~   73 (216)
                      ||||++|+++|.+.+..+++.+|+.++|.|..+.+.....      ++......+...++ ..+.++++||.+||++||.
T Consensus       261 l~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~  340 (440)
T PTZ00036        261 IAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPL  340 (440)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChh
Confidence            5899999999999999999999999999998887754321      12233344444454 3788999999999999999


Q ss_pred             CCCCHHHHHcCccccCC
Q 042950           74 KRPTAAEALQHLFFKRC   90 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~   90 (216)
                      +|+||.|+|+||||.++
T Consensus       341 ~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        341 KRLNPIEALADPFFDDL  357 (440)
T ss_pred             HCcCHHHHhCChhHHhh
Confidence            99999999999999884

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.39  E-value=5.2e-13  Score=114.25  Aligned_cols=87  Identities=29%  Similarity=0.497  Sum_probs=72.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|+++|.+.+..+.+..|+..+|.|..+.|+......        ......+....+.++.+++|||.+||++||
T Consensus       194 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp  273 (288)
T cd07871         194 LYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYET  273 (288)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCc
Confidence            589999999999999999999999999999999997654322        222233333445678999999999999999


Q ss_pred             CCCCCHHHHHcCccc
Q 042950           73 CKRPTAAEALQHLFF   87 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF   87 (216)
                      .+|+|+.|+|+||||
T Consensus       274 ~~R~t~~~~l~hp~f  288 (288)
T cd07871         274 KSRISAEAALRHSYF  288 (288)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.35  E-value=1e-12  Score=115.93  Aligned_cols=89  Identities=25%  Similarity=0.360  Sum_probs=68.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc---------------------cccCCCccccCCCCC--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA---------------------MLSGVNLSELMPSAS--   57 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~---------------------~~~~~~l~~~~~~~s--   57 (216)
                      |+||++|..||++.++.++|.+|..+||+.+..+.....+..                     .....++...+...+  
T Consensus       299 L~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e  378 (415)
T KOG0671|consen  299 LVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLE  378 (415)
T ss_pred             EEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHH
Confidence            689999999999999999999999999987776654431111                     112333443333333  


Q ss_pred             -HHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           58 -KDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        58 -~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                       .++.|||++||.|||.+|+|+.|||.||||+.
T Consensus       379 ~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~  411 (415)
T KOG0671|consen  379 HVQLFDLLRRMLEFDPARRITLREALSHPFFAR  411 (415)
T ss_pred             HhHHHHHHHHHHccCccccccHHHHhcCHHhhc
Confidence             35689999999999999999999999999987

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.33  E-value=7e-13  Score=112.12  Aligned_cols=89  Identities=29%  Similarity=0.501  Sum_probs=73.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCC-----------ccccCC--CCCHHHHHHHHhc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-----------LSELMP--SASKDAINLIESL   67 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~-----------l~~~~~--~~s~~~~dLL~~m   67 (216)
                      |+||+++.|+|+|.++..||..|..+||..+.+.|+.+.+++-+....           +.....  .-++++.|||.+|
T Consensus       219 maeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~l  298 (376)
T KOG0669|consen  219 MAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKL  298 (376)
T ss_pred             HHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHH
Confidence            579999999999999999999999999999999999887776221111           111111  1367999999999


Q ss_pred             cccCCCCCCCHHHHHcCccccC
Q 042950           68 CSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        68 L~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      |++||.+|+.+.+||+|.||..
T Consensus       299 l~~DP~kR~~ad~alnh~~F~k  320 (376)
T KOG0669|consen  299 LKLDPTKRIDADQALNHDFFWK  320 (376)
T ss_pred             hccCcccCcchHhhhchhhhhc
Confidence            9999999999999999999986

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.33  E-value=1.7e-12  Score=110.56  Aligned_cols=87  Identities=26%  Similarity=0.517  Sum_probs=74.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-----cccCCCccccCCCCCHHHHHHHHhccccCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-----MLSGVNLSELMPSASKDAINLIESLCSWDPCKR   75 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-----~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR   75 (216)
                      +|||++|+++|.+.++.+++..|+..+|.|....|+....++     ......+..+.+.++..+.+||.+||++||++|
T Consensus       199 l~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  278 (290)
T cd07862         199 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR  278 (290)
T ss_pred             HHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhc
Confidence            589999999999999999999999999999888887654443     233445556667789999999999999999999


Q ss_pred             CCHHHHHcCccc
Q 042950           76 PTAAEALQHLFF   87 (216)
Q Consensus        76 ~ta~eaL~HpfF   87 (216)
                      +|+.|+|+||||
T Consensus       279 ~s~~~~l~hp~f  290 (290)
T cd07862         279 ISAYSALSHPYF  290 (290)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.32  E-value=2.3e-12  Score=111.66  Aligned_cols=88  Identities=32%  Similarity=0.450  Sum_probs=72.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh--------ccccCCCccccCCC------------CCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ--------AMLSGVNLSELMPS------------ASKDA   60 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~--------~~~~~~~l~~~~~~------------~s~~~   60 (216)
                      ++||++|+.+|+|.+.+||..+|++.+|+|.+.........        +++...++.+.|++            ....+
T Consensus       207 ~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~a  286 (369)
T KOG0665|consen  207 MGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLA  286 (369)
T ss_pred             HHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHH
Confidence            57999999999999999999999999999999877654332        23344555555543            34578


Q ss_pred             HHHHHhccccCCCCCCCHHHHHcCcccc
Q 042950           61 INLIESLCSWDPCKRPTAAEALQHLFFK   88 (216)
Q Consensus        61 ~dLL~~mL~~dP~kR~ta~eaL~HpfF~   88 (216)
                      .||+.+||+.||++|+++.+||+||||+
T Consensus       287 rdll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  287 RDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHHHHHhhccChhhcccHHHHhcCCeee
Confidence            9999999999999999999999999998

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.29  E-value=5.8e-12  Score=108.70  Aligned_cols=90  Identities=26%  Similarity=0.471  Sum_probs=74.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|+++|.+.+..+.+..++.++|.+....|+......        ......+....+.++.++.|||.+||.+||
T Consensus       195 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp  274 (309)
T cd07872         195 FFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYES  274 (309)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCCh
Confidence            589999999999999999999999999999998887653321        222333334456688999999999999999


Q ss_pred             CCCCCHHHHHcCccccCC
Q 042950           73 CKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~   90 (216)
                      .+|+|+.|+|+||||+..
T Consensus       275 ~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         275 KKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             hhCCCHHHHhcChhhhhc
Confidence            999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.25  E-value=5.3e-12  Score=105.57  Aligned_cols=88  Identities=31%  Similarity=0.510  Sum_probs=68.3

Q ss_pred             cccccC-CCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc----------cccCCCccccCCC-----CCHHHHHHHH
Q 042950            2 AELLLF-RPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA----------MLSGVNLSELMPS-----ASKDAINLIE   65 (216)
Q Consensus         2 ~ELltG-~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~----------~~~~~~l~~~~~~-----~s~~~~dLL~   65 (216)
                      ++|+.. .|+|.|.++.|||.+|.++||+-.-..+-....+.          ....+.|..++..     ++++++|||.
T Consensus       224 A~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlld  303 (338)
T KOG0668|consen  224 ASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLD  303 (338)
T ss_pred             HHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHH
Confidence            455554 48889999999999999999974333332222211          4556677776653     6799999999


Q ss_pred             hccccCCCCCCCHHHHHcCccccC
Q 042950           66 SLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        66 ~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ++|.||..+|+||.||+.||||..
T Consensus       304 klLrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  304 KLLRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             HHHhhccccccchHHHhcCchHHH
Confidence            999999999999999999999986

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.25  E-value=8.4e-12  Score=105.97  Aligned_cols=87  Identities=31%  Similarity=0.561  Sum_probs=72.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-----cccCCCccccCCCCCHHHHHHHHhccccCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-----MLSGVNLSELMPSASKDAINLIESLCSWDPCKR   75 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-----~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR   75 (216)
                      +|||++|+++|.+.+..+.+.+|+..+|.+....|+.....+     ......+....+.++.++.|||.+||.+||.+|
T Consensus       197 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  276 (288)
T cd07863         197 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKR  276 (288)
T ss_pred             HHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccC
Confidence            579999999999999999999999999998888886543332     223334455566788999999999999999999


Q ss_pred             CCHHHHHcCccc
Q 042950           76 PTAAEALQHLFF   87 (216)
Q Consensus        76 ~ta~eaL~HpfF   87 (216)
                      +|+.|+|.||||
T Consensus       277 ~t~~~~l~hp~f  288 (288)
T cd07863         277 ISAFRALQHPFF  288 (288)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.23  E-value=1.6e-11  Score=106.10  Aligned_cols=87  Identities=30%  Similarity=0.510  Sum_probs=66.4

Q ss_pred             CcccccCCCCCCCCCH---------HHHHHHHHHhhCCCCHHHHHHHHhhccc------------cCCCcccc----CCC
Q 042950            1 MAELLLFRPLFQGTDE---------AEQMYKICSVLGNPTMDSWADELRQAML------------SGVNLSEL----MPS   55 (216)
Q Consensus         1 L~ELltG~plF~g~s~---------~dql~~I~~ilG~p~~~~~~~~~~~~~~------------~~~~l~~~----~~~   55 (216)
                      +|||++|+++|.+..+         .+++..|+.++|.|....|......+..            ....+...    ...
T Consensus       206 l~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (317)
T cd07868         206 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVK  285 (317)
T ss_pred             HHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCC
Confidence            5899999999986543         4789999999999999999876544310            01111111    112


Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      .+.+++|||.+||++||.+|+||+|+|+||||
T Consensus       286 ~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         286 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            46789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.23  E-value=1.6e-11  Score=105.39  Aligned_cols=90  Identities=30%  Similarity=0.483  Sum_probs=72.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccc--------cCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML--------SGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~--------~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      ||||++|+++|.+.+..+++..|..+++.+....|+........        ....+....+.+++++.+||.+||.+||
T Consensus       195 l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp  274 (301)
T cd07873         195 FYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEG  274 (301)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCc
Confidence            58999999999999999999999999999998888765433211        1111222334578899999999999999


Q ss_pred             CCCCCHHHHHcCccccCC
Q 042950           73 CKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~   90 (216)
                      .+|+|+.|+|+||||...
T Consensus       275 ~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         275 RKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             ccCcCHHHHhcCcccccc
Confidence            999999999999999873

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.22  E-value=2.5e-11  Score=105.42  Aligned_cols=90  Identities=34%  Similarity=0.523  Sum_probs=74.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc---------cccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA---------MLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~---------~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+...++..+...+|.|....+.......         ......+...++..++++.+||.+||..|
T Consensus       198 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  277 (338)
T cd07859         198 FAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFD  277 (338)
T ss_pred             HHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcC
Confidence            589999999999999999999999999999887665433211         22333445556678899999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |++|+|++|+|+||||+..
T Consensus       278 P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         278 PKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             cccCCCHHHHhcCchhhhc
Confidence            9999999999999999874

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.21  E-value=3.1e-11  Score=102.58  Aligned_cols=87  Identities=24%  Similarity=0.372  Sum_probs=67.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCc----------cccCCCCCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNL----------SELMPSASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l----------~~~~~~~s~~~~dLL~~mL~~   70 (216)
                      +|||++|+++|++.+..+.+..|..+.|..+...+......+......+          ......++.++.|||++||++
T Consensus       191 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~  270 (287)
T cd07848         191 LGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKL  270 (287)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccC
Confidence            5899999999999999999999999999877766654333221111111          111224688999999999999


Q ss_pred             CCCCCCCHHHHHcCccc
Q 042950           71 DPCKRPTAAEALQHLFF   87 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF   87 (216)
                      ||.+|+|++++|+||||
T Consensus       271 ~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         271 NPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.21  E-value=2.1e-11  Score=104.92  Aligned_cols=90  Identities=28%  Similarity=0.369  Sum_probs=69.8

Q ss_pred             CcccccCCCCCCCC-CHHHHHHHHHHhhCCCCHHHHHHHHhhccccCC--------CccccCC--CCCHHHHHHHHhccc
Q 042950            1 MAELLLFRPLFQGT-DEAEQMYKICSVLGNPTMDSWADELRQAMLSGV--------NLSELMP--SASKDAINLIESLCS   69 (216)
Q Consensus         1 L~ELltG~plF~g~-s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~--------~l~~~~~--~~s~~~~dLL~~mL~   69 (216)
                      ||||++|+++|.+. +..+++..++.++|.+....|+.....+.....        .+...+.  ..+.++.|||.+||+
T Consensus       194 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~  273 (303)
T cd07869         194 FVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQ  273 (303)
T ss_pred             HHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhc
Confidence            58999999999985 456788999999999998888766554422221        1211111  245789999999999


Q ss_pred             cCCCCCCCHHHHHcCccccCC
Q 042950           70 WDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        70 ~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      +||.+|+|+.|+|+||||++.
T Consensus       274 ~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         274 CFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             cCchhccCHHHHhcCcccccC
Confidence            999999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.21  E-value=2.7e-11  Score=102.62  Aligned_cols=87  Identities=31%  Similarity=0.582  Sum_probs=73.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      +|||++|+.+|.+.++.+.+.++++.+|.+....|+.....+       .+....+..+.+.++.++.+||.+||..||.
T Consensus       191 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  270 (284)
T cd07860         191 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPN  270 (284)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcc
Confidence            579999999999999999999999999999888777554443       2233344455566889999999999999999


Q ss_pred             CCCCHHHHHcCccc
Q 042950           74 KRPTAAEALQHLFF   87 (216)
Q Consensus        74 kR~ta~eaL~HpfF   87 (216)
                      +|+|+.++|.||||
T Consensus       271 ~Rpt~~~~l~~~~f  284 (284)
T cd07860         271 KRISAKAALAHPFF  284 (284)
T ss_pred             cCCCHHHHhcCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.20  E-value=2.4e-11  Score=104.69  Aligned_cols=90  Identities=36%  Similarity=0.538  Sum_probs=73.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccc-----c---CCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-----S---GVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~-----~---~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|+++|.+.+..+++..+...+|.+....|+.....+..     .   ...+...+...++++.|||.+||.+||
T Consensus       199 l~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp  278 (309)
T cd07845         199 LAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDP  278 (309)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCCh
Confidence            58999999999999999999999999999998888766554411     1   112222334468999999999999999


Q ss_pred             CCCCCHHHHHcCccccCC
Q 042950           73 CKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~   90 (216)
                      .+|+|+.++|+||||.+.
T Consensus       279 ~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         279 KKRATAEEALESSYFKEK  296 (309)
T ss_pred             hhCcCHHHHhcChhhccC
Confidence            999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.20  E-value=2.4e-11  Score=102.82  Aligned_cols=88  Identities=38%  Similarity=0.645  Sum_probs=74.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      ++||++|.++|.+.++..++..++..++.+....|+....+.        ......+...++..+.++.+||.+||.+||
T Consensus       191 l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  270 (286)
T cd07832         191 FAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDP  270 (286)
T ss_pred             HHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccCh
Confidence            579999999999999999999999999999998888755543        122233555666788999999999999999


Q ss_pred             CCCCCHHHHHcCcccc
Q 042950           73 CKRPTAAEALQHLFFK   88 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~   88 (216)
                      .+|+|++++|+||||.
T Consensus       271 ~~R~~~~~~l~h~~~~  286 (286)
T cd07832         271 SKRLSAAEALRHPYFT  286 (286)
T ss_pred             hhCCCHHHHhhCcCcC
Confidence            9999999999999994

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.17  E-value=1.6e-11  Score=103.57  Aligned_cols=71  Identities=27%  Similarity=0.316  Sum_probs=59.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||-|+.|+++|.|.+..+....|+..--..+...|                  +.+++++.|||++||..||++|+||.|
T Consensus       202 LfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w------------------~~is~~Ak~LvrrML~~dP~kRIta~E  263 (355)
T KOG0033|consen  202 LYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEW------------------DTVTPEAKSLIRRMLTVNPKKRITADE  263 (355)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHhccccCCCCccc------------------CcCCHHHHHHHHHHhccChhhhccHHH
Confidence            46789999999999988888888763222223334                  468999999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      ||+|||+.+
T Consensus       264 AL~HpWi~~  272 (355)
T KOG0033|consen  264 ALKHPWICN  272 (355)
T ss_pred             HhCCchhcc
Confidence            999999987

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.17  E-value=5.1e-11  Score=105.81  Aligned_cols=91  Identities=31%  Similarity=0.429  Sum_probs=71.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCcc---ccCCCCCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLS---ELMPSASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~---~~~~~~s~~~~dLL~~mL~~   70 (216)
                      +|||++|+++|.+.+..+++..|.+.+|.++.+.+.......       ......+.   .+....++++.+||.+||.+
T Consensus       195 l~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~  274 (372)
T cd07853         195 FAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVF  274 (372)
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCC
Confidence            589999999999999999999999999999887665432111       11111111   22345688999999999999


Q ss_pred             CCCCCCCHHHHHcCccccCCC
Q 042950           71 DPCKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF~~~~   91 (216)
                      ||.+|+|+.|+|+||||....
T Consensus       275 dP~~R~t~~e~l~hp~~~~~~  295 (372)
T cd07853         275 DPDKRISAADALAHPYLDEGR  295 (372)
T ss_pred             ChhhCcCHHHHhcCHhhCCCc
Confidence            999999999999999998843

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00284 protein kinase; Provisional

Probab=99.17  E-value=2.9e-11  Score=110.96  Aligned_cols=90  Identities=18%  Similarity=0.140  Sum_probs=64.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHH-----Hhhc--------cccCCCccccCC-------CCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADE-----LRQA--------MLSGVNLSELMP-------SASKDA   60 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~-----~~~~--------~~~~~~l~~~~~-------~~s~~~   60 (216)
                      ||||++|++||.+.+..+++..|.+++|.++...+...     ..+.        ......+..+..       ..++.+
T Consensus       335 l~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (467)
T PTZ00284        335 IYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLL  414 (467)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHH
Confidence            58999999999999999999999999998765543210     0000        000000100000       125678


Q ss_pred             HHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           61 INLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        61 ~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      +|||.+||++||.+|+||.|+|+||||...
T Consensus       415 ~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        415 CDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             HHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence            899999999999999999999999999873

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.14  E-value=6.9e-11  Score=100.03  Aligned_cols=87  Identities=32%  Similarity=0.620  Sum_probs=71.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      ++||++|+++|.+.++.+.+..++..+|.+....|+....+.       ......+......+++++.+||.+||.+||.
T Consensus       192 l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  271 (285)
T cd07861         192 FAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPA  271 (285)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChh
Confidence            579999999999999999999999999998888886544433       1122223333456889999999999999999


Q ss_pred             CCCCHHHHHcCccc
Q 042950           74 KRPTAAEALQHLFF   87 (216)
Q Consensus        74 kR~ta~eaL~HpfF   87 (216)
                      +|||+.++|.||||
T Consensus       272 ~Rpt~~~ll~~~~~  285 (285)
T cd07861         272 KRISAKKALNHPYF  285 (285)
T ss_pred             hCCCHHHHhcCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.13  E-value=1.7e-10  Score=102.01  Aligned_cols=89  Identities=28%  Similarity=0.405  Sum_probs=68.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh--------ccccCCCccccCC------------CCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ--------AMLSGVNLSELMP------------SASKDA   60 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~--------~~~~~~~l~~~~~------------~~s~~~   60 (216)
                      ||||++|+.+|.+.+..+.+.+++..+|.|..+.+......        +......+..+++            ..+.++
T Consensus       215 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (364)
T cd07875         215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA  294 (364)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHH
Confidence            58999999999999999999999999999887765543221        1111112222211            135688


Q ss_pred             HHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           61 INLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        61 ~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .|||.+||.+||.+|+|+.|+|+||||..
T Consensus       295 ~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         295 RDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence            99999999999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.12  E-value=1.4e-10  Score=101.61  Aligned_cols=90  Identities=32%  Similarity=0.468  Sum_probs=72.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh---------hccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR---------QAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~---------~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ||||++|+++|.+.+..+++..+.+..|.+..+.+.....         ++......+...+...++.+.+||.+||.+|
T Consensus       206 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d  285 (343)
T cd07878         206 MAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLD  285 (343)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999887765543221         1123333445556667889999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.|+|+||||...
T Consensus       286 p~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         286 SDKRISASEALAHPYFSQY  304 (343)
T ss_pred             hhhCCCHHHHhcCcchhcc
Confidence            9999999999999999873

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.11  E-value=1.2e-10  Score=98.08  Aligned_cols=87  Identities=33%  Similarity=0.698  Sum_probs=74.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      ++||++|+++|.+.+..+.+..|...++.+....|..+..+.       ......+...++..+.++.+||.+||..||.
T Consensus       189 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~  268 (282)
T cd07829         189 FAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPA  268 (282)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcc
Confidence            479999999999999999999999999999999998776653       2233334455666789999999999999999


Q ss_pred             CCCCHHHHHcCccc
Q 042950           74 KRPTAAEALQHLFF   87 (216)
Q Consensus        74 kR~ta~eaL~HpfF   87 (216)
                      +|+++.+++.||||
T Consensus       269 ~Rp~~~~~l~~p~~  282 (282)
T cd07829         269 KRISAKEALKHPYF  282 (282)
T ss_pred             cCCCHHHHhhCcCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.11  E-value=7.5e-11  Score=100.43  Aligned_cols=88  Identities=32%  Similarity=0.586  Sum_probs=72.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc------cccCCCccccCCCCCHHHHHHHHhccccCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA------MLSGVNLSELMPSASKDAINLIESLCSWDPCK   74 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k   74 (216)
                      +|||++|.++|.+.++...+..|+..++.++...|+......      ......+....+..+.++.+||.+||.+||.+
T Consensus       202 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~  281 (295)
T cd07837         202 FAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAK  281 (295)
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhh
Confidence            579999999999999999999999999999888886544433      22223334445668899999999999999999


Q ss_pred             CCCHHHHHcCcccc
Q 042950           75 RPTAAEALQHLFFK   88 (216)
Q Consensus        75 R~ta~eaL~HpfF~   88 (216)
                      |+++.|+|.||||+
T Consensus       282 R~~~~eil~~~~~~  295 (295)
T cd07837         282 RISAKAALTHPYFD  295 (295)
T ss_pred             cCCHHHHhcCCCcC
Confidence            99999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.11  E-value=1.6e-10  Score=98.61  Aligned_cols=90  Identities=36%  Similarity=0.608  Sum_probs=75.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc------cccCCCccccCCCCCHHHHHHHHhccccCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA------MLSGVNLSELMPSASKDAINLIESLCSWDPCK   74 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k   74 (216)
                      ++||++|.++|.+.++.+.+.+++..++.+....|+....+.      .....++..++...+.++.+||.+||.+||++
T Consensus       193 l~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  272 (298)
T cd07841         193 FAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNK  272 (298)
T ss_pred             HHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCccc
Confidence            579999999999999999999999999999888887655443      22334455566678899999999999999999


Q ss_pred             CCCHHHHHcCccccCC
Q 042950           75 RPTAAEALQHLFFKRC   90 (216)
Q Consensus        75 R~ta~eaL~HpfF~~~   90 (216)
                      |+|+.|+|.|+||.+.
T Consensus       273 R~s~~e~l~~~~~~~~  288 (298)
T cd07841         273 RITARQALEHPYFSND  288 (298)
T ss_pred             CcCHHHHhhCccccCC
Confidence            9999999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.11  E-value=1.4e-10  Score=98.19  Aligned_cols=87  Identities=33%  Similarity=0.577  Sum_probs=70.5

Q ss_pred             CcccccCC-CCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccc-------cCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFR-PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~-plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~-------~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|. |+|.+.+..+++..|++.+|.+....|+.....+..       ....+....+.+++++.+||.+||.+||
T Consensus       190 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  269 (284)
T cd07839         190 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNP  269 (284)
T ss_pred             HHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCCh
Confidence            47999876 457788888999999999999998888876655421       1122344556789999999999999999


Q ss_pred             CCCCCHHHHHcCccc
Q 042950           73 CKRPTAAEALQHLFF   87 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF   87 (216)
                      .+|+|++++|.||||
T Consensus       270 ~~R~t~~~il~h~~f  284 (284)
T cd07839         270 VQRISAEEALQHPYF  284 (284)
T ss_pred             hhcCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.11  E-value=5.6e-11  Score=108.79  Aligned_cols=89  Identities=20%  Similarity=0.272  Sum_probs=67.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc---------------------------cccC-CCcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA---------------------------MLSG-VNLSEL   52 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~---------------------------~~~~-~~l~~~   52 (216)
                      ||||+||+.||+|.++.++|...+++-|..+..++..+.-..                           ..++ ..|...
T Consensus       625 LYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~  704 (752)
T KOG0670|consen  625 LYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSE  704 (752)
T ss_pred             eEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHH
Confidence            799999999999999999999999999998887765432111                           1111 222211


Q ss_pred             C------CC----CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           53 M------PS----ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        53 ~------~~----~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      +      +.    .-.++.|||.+||.+||++|+|+.+||.||||..
T Consensus       705 l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  705 LIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             HhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            1      11    1236789999999999999999999999999975

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.11  E-value=1.1e-10  Score=101.83  Aligned_cols=90  Identities=39%  Similarity=0.650  Sum_probs=75.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc------cccCCCccccCCCCCHHHHHHHHhccccCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA------MLSGVNLSELMPSASKDAINLIESLCSWDPCK   74 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k   74 (216)
                      ++||++|+++|.+.+..+++..|+..+|.|....|+....++      ......+...+...+.++.+||.+||..||++
T Consensus       224 l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  303 (335)
T PTZ00024        224 FAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLE  303 (335)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchh
Confidence            579999999999999999999999999999988887655443      11223344445667899999999999999999


Q ss_pred             CCCHHHHHcCccccCC
Q 042950           75 RPTAAEALQHLFFKRC   90 (216)
Q Consensus        75 R~ta~eaL~HpfF~~~   90 (216)
                      |+|++|+|.|+||+..
T Consensus       304 R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        304 RISAKEALKHEYFKSD  319 (335)
T ss_pred             ccCHHHHhcCcccCCC
Confidence            9999999999999974

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.10  E-value=1.9e-10  Score=101.01  Aligned_cols=92  Identities=34%  Similarity=0.438  Sum_probs=74.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh---------ccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ---------AMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~---------~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ++||++|+.+|.+.+..+++..|+.++|.+....+......         +......+...++..+.++.+||.+||..|
T Consensus       205 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  284 (342)
T cd07879         205 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELD  284 (342)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCC
Confidence            57999999999999989999999999998877665433221         123334455556678899999999999999


Q ss_pred             CCCCCCHHHHHcCccccCCCC
Q 042950           72 PCKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~~~   92 (216)
                      |.+|+++.++|.||||..+..
T Consensus       285 P~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         285 VDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             hhhCcCHHHHhcCcchhhccc
Confidence            999999999999999998543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.09  E-value=2.5e-10  Score=100.77  Aligned_cols=89  Identities=30%  Similarity=0.459  Sum_probs=68.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh--------ccccCCCccccCC------------CCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ--------AMLSGVNLSELMP------------SASKDA   60 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~--------~~~~~~~l~~~~~------------~~s~~~   60 (216)
                      +|||++|+.+|.+.+..+++..+++.+|.|..+.+......        +......+.+.++            ..+.++
T Consensus       212 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (359)
T cd07876         212 MGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQA  291 (359)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhH
Confidence            58999999999999999999999999999887665433211        1222222222221            246789


Q ss_pred             HHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           61 INLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        61 ~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .+||.+||.+||++|+|+.|+|+||||..
T Consensus       292 ~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         292 RDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence            99999999999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.09  E-value=1.3e-10  Score=100.08  Aligned_cols=87  Identities=31%  Similarity=0.499  Sum_probs=65.3

Q ss_pred             CcccccCCCCCCCCCH---------HHHHHHHHHhhCCCCHHHHHHHHhhccc------------cCCCcccc----CCC
Q 042950            1 MAELLLFRPLFQGTDE---------AEQMYKICSVLGNPTMDSWADELRQAML------------SGVNLSEL----MPS   55 (216)
Q Consensus         1 L~ELltG~plF~g~s~---------~dql~~I~~ilG~p~~~~~~~~~~~~~~------------~~~~l~~~----~~~   55 (216)
                      ||||++|+++|.+..+         .+++..++.++|.+..+.|......+..            ....+...    -..
T Consensus       206 l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (317)
T cd07867         206 FAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVK  285 (317)
T ss_pred             HHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCC
Confidence            5899999999976542         4688899999999999888765443311            00111111    112


Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      .+..+.+||.+||++||.+|+|+.|+|+||||
T Consensus       286 ~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         286 PDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            46778999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.09  E-value=1.8e-10  Score=97.56  Aligned_cols=87  Identities=34%  Similarity=0.671  Sum_probs=72.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      +|||++|+++|.+.+..+.+..+++.++.|....|.....++       ...........+..+.++.+||.+||..||.
T Consensus       190 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  269 (283)
T cd07835         190 FAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPA  269 (283)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChh
Confidence            579999999999999999999999999999998887665544       1222233344566789999999999999999


Q ss_pred             CCCCHHHHHcCccc
Q 042950           74 KRPTAAEALQHLFF   87 (216)
Q Consensus        74 kR~ta~eaL~HpfF   87 (216)
                      +|+|+.|++.|+||
T Consensus       270 ~Rpt~~~il~~~~~  283 (283)
T cd07835         270 KRISAKAALQHPYF  283 (283)
T ss_pred             hCcCHHHHhcCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.09  E-value=2.1e-10  Score=97.82  Aligned_cols=87  Identities=36%  Similarity=0.603  Sum_probs=72.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcccc--------CCCccccCCC--CCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS--------GVNLSELMPS--ASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~--------~~~l~~~~~~--~s~~~~dLL~~mL~~   70 (216)
                      ++||++|+++|.+.+..+.+.+++..+|.|....|+....++...        ...+...++.  +++.+.+||.+||..
T Consensus       197 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  276 (293)
T cd07843         197 FAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTY  276 (293)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhcc
Confidence            479999999999999999999999999999999998776655222        1223344554  388999999999999


Q ss_pred             CCCCCCCHHHHHcCccc
Q 042950           71 DPCKRPTAAEALQHLFF   87 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF   87 (216)
                      ||++|+|+.|+|.|+||
T Consensus       277 ~p~~R~t~~ell~~~~f  293 (293)
T cd07843         277 DPAKRISAEDALKHPYF  293 (293)
T ss_pred             CccccCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.07  E-value=2e-10  Score=105.11  Aligned_cols=107  Identities=25%  Similarity=0.194  Sum_probs=85.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      |||||.|.|||.+.+..+...+|+..--         ....|        . -...+++|.|||.+||. ||++|+.   
T Consensus       378 myEmLvGyPPF~s~tp~~T~rkI~nwr~---------~l~fP--------~-~~~~s~eA~DLI~rll~-d~~~RLG~~G  438 (550)
T KOG0605|consen  378 MYEMLVGYPPFCSETPQETYRKIVNWRE---------TLKFP--------E-EVDLSDEAKDLITRLLC-DPENRLGSKG  438 (550)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhh---------hccCC--------C-cCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence            6899999999999999999999986321         11110        0 01367999999999999 9999995   


Q ss_pred             HHHHHcCccccCCCCCCCCCCCCccccchhhhhhhhhccccCCcCCCCCC
Q 042950           78 AAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPN  127 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                      ++|+.+||||+.+.|....... +++.+.+....|.+++..+++.....+
T Consensus       439 ~~EIK~HPfF~~v~W~~l~~~~-apfvP~v~~~~DT~yFddF~e~~~~~~  487 (550)
T KOG0605|consen  439 AEEIKKHPFFKGVDWDHLREMP-APFVPQVNSELDTQYFDDFPEEDSMTP  487 (550)
T ss_pred             HHHHhcCCccccCCcchhhcCC-CCCCCCCCCcccccccccCcccccCcc
Confidence            8999999999999999876655 558889999999999998887554443

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.07  E-value=1.3e-10  Score=99.17  Aligned_cols=92  Identities=29%  Similarity=0.561  Sum_probs=74.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcc-------ccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM-------LSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~-------~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      +|||++|+++|.+.+..+.+.+++..++.|....|.....++.       .....+....+..++++.+||.+||..||.
T Consensus       194 ~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~  273 (294)
T PLN00009        194 FAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPS  273 (294)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChh
Confidence            4799999999999999999999999999998888875544431       122223333456789999999999999999


Q ss_pred             CCCCHHHHHcCccccCCCC
Q 042950           74 KRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~~~   92 (216)
                      +|+++.++|+|+||.+...
T Consensus       274 ~Rps~~~~l~~~~~~~~~~  292 (294)
T PLN00009        274 KRITARAALEHEYFKDLGD  292 (294)
T ss_pred             hCcCHHHHhcCchHhHHhc
Confidence            9999999999999998543

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.06  E-value=2.2e-10  Score=98.04  Aligned_cols=87  Identities=31%  Similarity=0.522  Sum_probs=70.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcccc--------CCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS--------GVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~--------~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|+++|.+.+..+++..|+...|.+....|+....++...        ...+...+...+.++.+||.+||..||
T Consensus       217 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  296 (311)
T cd07866         217 FAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDP  296 (311)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCc
Confidence            579999999999999999999999999998888777655444211        122333345567889999999999999


Q ss_pred             CCCCCHHHHHcCccc
Q 042950           73 CKRPTAAEALQHLFF   87 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF   87 (216)
                      .+|+|+.++|.||||
T Consensus       297 ~~R~t~~ell~~~~f  311 (311)
T cd07866         297 YKRLTASDALEHPYF  311 (311)
T ss_pred             ccCcCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.05  E-value=3.4e-10  Score=99.12  Aligned_cols=89  Identities=34%  Similarity=0.496  Sum_probs=70.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh---------hccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR---------QAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~---------~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+....+..|..++|.+..+.|.....         .+......+....+.++.++.+||.+||..|
T Consensus       199 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  278 (337)
T cd07858         199 FAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFD  278 (337)
T ss_pred             HHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCC
Confidence            5799999999999998899999999999988776632111         1111222333445678999999999999999


Q ss_pred             CCCCCCHHHHHcCccccC
Q 042950           72 PCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~   89 (216)
                      |.+|+|+.++|+||||..
T Consensus       279 P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         279 PSKRITVEEALAHPYLAS  296 (337)
T ss_pred             hhhccCHHHHHcCcchhh
Confidence            999999999999999987

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.03  E-value=2.7e-10  Score=96.02  Aligned_cols=87  Identities=41%  Similarity=0.711  Sum_probs=71.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|+++|.+.+..+++..+...+|.+....|.......        ...........+.++.++.+||.+||..||
T Consensus       189 l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P  268 (283)
T cd05118         189 FAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDP  268 (283)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCc
Confidence            579999999999999999999999999998888776554421        222223334445678999999999999999


Q ss_pred             CCCCCHHHHHcCccc
Q 042950           73 CKRPTAAEALQHLFF   87 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF   87 (216)
                      .+|+++.+++.||||
T Consensus       269 ~~Rp~~~~ll~~~~~  283 (283)
T cd05118         269 HKRITAEQALAHPYF  283 (283)
T ss_pred             ccCcCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.03  E-value=4.7e-10  Score=94.85  Aligned_cols=87  Identities=52%  Similarity=0.960  Sum_probs=71.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      ++||++|+++|++.+..+++.+++.++|.+....|.....+.        ......+...++..+.++.+||.+||..||
T Consensus       189 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  268 (283)
T cd07830         189 MAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDP  268 (283)
T ss_pred             HHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCc
Confidence            479999999999999999999999999999988887654432        112223344455567899999999999999


Q ss_pred             CCCCCHHHHHcCccc
Q 042950           73 CKRPTAAEALQHLFF   87 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF   87 (216)
                      .+|+|+.|++.||||
T Consensus       269 ~~Rpt~~ei~~~~~~  283 (283)
T cd07830         269 KKRPTASQALQHPYF  283 (283)
T ss_pred             ccCCCHHHHhhCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.03  E-value=4.3e-10  Score=97.65  Aligned_cols=90  Identities=39%  Similarity=0.541  Sum_probs=74.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh---------hccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR---------QAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~---------~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ++||++|+++|.+.+..+++..|+..+|.+....|.....         .......++...++.++.++.+||.+||.+|
T Consensus       197 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  276 (330)
T cd07834         197 FAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD  276 (330)
T ss_pred             HHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC
Confidence            4799999999999999999999999999988877652111         1133345566667778999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.++|+||||...
T Consensus       277 P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         277 PKKRITADEALAHPYLAQL  295 (330)
T ss_pred             hhhCCCHHHHHhCccHHhh
Confidence            9999999999999999973

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.03  E-value=1.1e-10  Score=109.24  Aligned_cols=95  Identities=25%  Similarity=0.297  Sum_probs=78.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCC-CCCHHHHHHHHhccccCCCCCCC--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMP-SASKDAINLIESLCSWDPCKRPT--   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~kR~t--   77 (216)
                      ||||+.|++||+|+++.+.+..|+..  .+                     .+| .++.+++++|++||+.||.+|+.  
T Consensus       558 lyeML~Gq~PF~gddEee~FdsI~~d--~~---------------------~yP~~ls~ea~~il~~ll~k~p~kRLG~~  614 (694)
T KOG0694|consen  558 LYEMLVGESPFPGDDEEEVFDSIVND--EV---------------------RYPRFLSKEAIAIMRRLLRKNPEKRLGSG  614 (694)
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHhcC--CC---------------------CCCCcccHHHHHHHHHHhccCcccccCCC
Confidence            69999999999999999999999762  11                     122 37899999999999999999996  


Q ss_pred             ---HHHHHcCccccCCCCCCCCCCCCcc-ccchhhhhhhhhcccc
Q 042950           78 ---AAEALQHLFFKRCLYAPPHIRSVPA-VATTTRGMLKQQGAGI  118 (216)
Q Consensus        78 ---a~eaL~HpfF~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  118 (216)
                         +.++..||||+++.|.....+...+ +.++.++..|..+++.
T Consensus       615 e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D~snFd~  659 (694)
T KOG0694|consen  615 ERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPEDVSNFDE  659 (694)
T ss_pred             CCCchhhhhCCccccCCHHHHhhccCCCCCCcccCChhhhcccch
Confidence               5889999999999999888877665 7777777777765543

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.02  E-value=4.6e-10  Score=94.69  Aligned_cols=87  Identities=37%  Similarity=0.628  Sum_probs=66.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      +|||++|+++|.+.+..+.+..+.+++|.+....+.......       ......+....+..+.++.+||.+||.+||+
T Consensus       189 l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  268 (282)
T cd07831         189 FFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPD  268 (282)
T ss_pred             HHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcc
Confidence            579999999999999999999999999987765432211110       1111222333445789999999999999999


Q ss_pred             CCCCHHHHHcCccc
Q 042950           74 KRPTAAEALQHLFF   87 (216)
Q Consensus        74 kR~ta~eaL~HpfF   87 (216)
                      +|+++.++|+||||
T Consensus       269 ~R~~~~~~l~~~~~  282 (282)
T cd07831         269 ERITAKQALRHPYF  282 (282)
T ss_pred             cccCHHHHhhCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.02  E-value=4.1e-10  Score=98.46  Aligned_cols=90  Identities=32%  Similarity=0.548  Sum_probs=73.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc---------cccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA---------MLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~---------~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+...++..+..++|.+..+.+.......         ......+....+..+.++.+||.+||..|
T Consensus       200 l~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  279 (336)
T cd07849         200 LAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN  279 (336)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC
Confidence            579999999999999999999999999998887775433211         12223344455667899999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.++|+||||...
T Consensus       280 P~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         280 PHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             hhhCcCHHHHhcCcccccc
Confidence            9999999999999999974

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.02  E-value=5.5e-10  Score=98.15  Aligned_cols=90  Identities=33%  Similarity=0.488  Sum_probs=72.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh---------hccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR---------QAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~---------~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+..+++..|++.++.+.+..+.....         .+......+...+...+.++.+||.+||..|
T Consensus       206 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~  285 (343)
T cd07851         206 MAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD  285 (343)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCC
Confidence            5799999999999999999999999999888766553321         1122233344455567899999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|||+.++|+||||...
T Consensus       286 P~~Rpt~~ell~h~~~~~~  304 (343)
T cd07851         286 PDKRITAAEALAHPYLAEY  304 (343)
T ss_pred             hhhCCCHHHHhcCCCcccc
Confidence            9999999999999999973

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.01  E-value=4.4e-10  Score=98.21  Aligned_cols=89  Identities=34%  Similarity=0.478  Sum_probs=73.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHH---------hhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---------RQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~---------~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+...++..|...+|.|+...+....         ..+......+..+++..+.++.+||.+||..|
T Consensus       202 l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  281 (334)
T cd07855         202 FAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFD  281 (334)
T ss_pred             HHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCC
Confidence            579999999999999999999999999998877654321         11223334455566778999999999999999


Q ss_pred             CCCCCCHHHHHcCccccC
Q 042950           72 PCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~   89 (216)
                      |.+|+++.++|.||||..
T Consensus       282 P~~Rpt~~~~l~~~~~~~  299 (334)
T cd07855         282 PEERITVEQALQHPFLAQ  299 (334)
T ss_pred             hhhCcCHHHHHhChhhhh
Confidence            999999999999999987

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.00  E-value=2.4e-10  Score=101.96  Aligned_cols=71  Identities=30%  Similarity=0.369  Sum_probs=54.2

Q ss_pred             CcccccCCCCCCCCCHHH-HHHHHHHhhCCCC--HHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAE-QMYKICSVLGNPT--MDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~d-ql~~I~~ilG~p~--~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||-+|+|.|||.+....- ...+|.+  |.-.  ...|.                  .++++++|||.+||+.||++|+|
T Consensus       371 LfvcLsG~pPFS~~~~~~sl~eQI~~--G~y~f~p~~w~------------------~Iseea~dlI~~mL~VdP~~R~s  430 (475)
T KOG0615|consen  371 LFVCLSGYPPFSEEYTDPSLKEQILK--GRYAFGPLQWD------------------RISEEALDLINWMLVVDPENRPS  430 (475)
T ss_pred             EEEEeccCCCcccccCCccHHHHHhc--CcccccChhhh------------------hhhHHHHHHHHHhhEeCcccCcC
Confidence            577899999998765433 3444443  3311  23343                  58999999999999999999999


Q ss_pred             HHHHHcCccccCCC
Q 042950           78 AAEALQHLFFKRCL   91 (216)
Q Consensus        78 a~eaL~HpfF~~~~   91 (216)
                      +.|||+||||+..+
T Consensus       431 ~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  431 ADEALNHPWFKDAP  444 (475)
T ss_pred             HHHHhcChhhhccc
Confidence            99999999999743

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.00  E-value=4.3e-10  Score=95.15  Aligned_cols=87  Identities=36%  Similarity=0.608  Sum_probs=71.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcc-------ccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM-------LSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~-------~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      ++||++|+++|.+.+..+++..++...+.|....|......+.       .....+..+++..+.++.+||.+||..||.
T Consensus       191 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  270 (284)
T cd07836         191 MAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPE  270 (284)
T ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcc
Confidence            4799999999999999999999999999999988876654441       111223334456788999999999999999


Q ss_pred             CCCCHHHHHcCccc
Q 042950           74 KRPTAAEALQHLFF   87 (216)
Q Consensus        74 kR~ta~eaL~HpfF   87 (216)
                      +|+++.++++||||
T Consensus       271 ~R~~~~~~l~~~~f  284 (284)
T cd07836         271 LRISAHDALQHPWF  284 (284)
T ss_pred             cCCCHHHHhcCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.99  E-value=1.2e-09  Score=96.15  Aligned_cols=90  Identities=30%  Similarity=0.432  Sum_probs=68.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh--------ccccCCCccccCC-------------CCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ--------AMLSGVNLSELMP-------------SASKD   59 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~--------~~~~~~~l~~~~~-------------~~s~~   59 (216)
                      +|||++|+.+|.+.+..+++..|+..+|.|..+.+......        +......+.++++             ..+.+
T Consensus       207 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (353)
T cd07850         207 MGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQ  286 (353)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhH
Confidence            57999999999999999999999999999887655432211        1112222222221             23567


Q ss_pred             HHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           60 AINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        60 ~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      +.+||.+||.+||.+|+|+.|+|.||||+..
T Consensus       287 ~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~  317 (353)
T cd07850         287 ARDLLSKMLVIDPEKRISVDDALQHPYINVW  317 (353)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence            8999999999999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.98  E-value=7.9e-10  Score=94.09  Aligned_cols=87  Identities=31%  Similarity=0.491  Sum_probs=69.1

Q ss_pred             CcccccCCCCCCCCC-HHHHHHHHHHhhCCCCHHHHHHHHhhcc--------ccCCCccccCCCCC--HHHHHHHHhccc
Q 042950            1 MAELLLFRPLFQGTD-EAEQMYKICSVLGNPTMDSWADELRQAM--------LSGVNLSELMPSAS--KDAINLIESLCS   69 (216)
Q Consensus         1 L~ELltG~plF~g~s-~~dql~~I~~ilG~p~~~~~~~~~~~~~--------~~~~~l~~~~~~~s--~~~~dLL~~mL~   69 (216)
                      ++||++|+++|.+.+ ..+++..+.+.++.+....|+.......        .....+...++..+  .++.+||.+||.
T Consensus       194 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  273 (291)
T cd07844         194 FYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQ  273 (291)
T ss_pred             HHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhc
Confidence            579999999998765 6788899999999999988876655431        11222333334455  889999999999


Q ss_pred             cCCCCCCCHHHHHcCccc
Q 042950           70 WDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        70 ~dP~kR~ta~eaL~HpfF   87 (216)
                      +||.+|+|+.++|+|+||
T Consensus       274 ~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         274 YEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cCcccccCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=3.3e-10  Score=102.98  Aligned_cols=94  Identities=22%  Similarity=0.299  Sum_probs=67.5

Q ss_pred             CcccccCCCCCCCCC------HHHHHHHHHHhhCCCCHHHHHH------HHhhc-------cccCCCccccCC-------
Q 042950            1 MAELLLFRPLFQGTD------EAEQMYKICSVLGNPTMDSWAD------ELRQA-------MLSGVNLSELMP-------   54 (216)
Q Consensus         1 L~ELltG~plF~g~s------~~dql~~I~~ilG~p~~~~~~~------~~~~~-------~~~~~~l~~~~~-------   54 (216)
                      ++||.||.-||.-++      +.|+|..|+++||..+......      +.+..       ..+..+|.+++.       
T Consensus       441 ~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~  520 (590)
T KOG1290|consen  441 AFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSE  520 (590)
T ss_pred             HHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCH
Confidence            379999999996432      5799999999999977654322      11111       223334443321       


Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~~~~   94 (216)
                      ....++.|||.-||+++|+||+||.++|+|||++...-..
T Consensus       521 e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~~  560 (590)
T KOG1290|consen  521 EDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGPP  560 (590)
T ss_pred             HHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCCCc
Confidence            1345678999999999999999999999999999864443

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.96  E-value=1.2e-09  Score=93.78  Aligned_cols=87  Identities=36%  Similarity=0.653  Sum_probs=66.3

Q ss_pred             CcccccCCCCCCCCCH---------HHHHHHHHHhhCCCCHHHHHHHHhhccccC------------CCccccC---CCC
Q 042950            1 MAELLLFRPLFQGTDE---------AEQMYKICSVLGNPTMDSWADELRQAMLSG------------VNLSELM---PSA   56 (216)
Q Consensus         1 L~ELltG~plF~g~s~---------~dql~~I~~ilG~p~~~~~~~~~~~~~~~~------------~~l~~~~---~~~   56 (216)
                      |+||++|+++|.+.+.         .+.+..++..++.+....|.....++.+..            ..+...+   ...
T Consensus       206 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (316)
T cd07842         206 FAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKP  285 (316)
T ss_pred             HHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCC
Confidence            5799999999987653         357888999999998888876555542111            1111111   146


Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      +.++.+||.+||.+||++|+|+.|+++||||
T Consensus       286 ~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         286 DSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            7889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.95  E-value=7.9e-10  Score=101.51  Aligned_cols=72  Identities=25%  Similarity=0.315  Sum_probs=64.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||.|+.|.|||.+.++...+.+|+++--.                      +-+..++++.|||+++|+.||.+|+|+.+
T Consensus       277 lyQmlaG~PPFra~NeyliFqkI~~l~y~----------------------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~q  334 (604)
T KOG0592|consen  277 LYQMLAGQPPFRAANEYLIFQKIQALDYE----------------------FPEGFPEDARDLIKKLLVRDPSDRLTSQQ  334 (604)
T ss_pred             HHHHhcCCCCCccccHHHHHHHHHHhccc----------------------CCCCCCHHHHHHHHHHHccCccccccHHH
Confidence            58899999999999999999999986432                      12357799999999999999999999999


Q ss_pred             HHcCccccCCCCCC
Q 042950           81 ALQHLFFKRCLYAP   94 (216)
Q Consensus        81 aL~HpfF~~~~~~~   94 (216)
                      +.+||||..+.|..
T Consensus       335 Ik~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  335 IKAHPFFEGVDWEN  348 (604)
T ss_pred             HhhCcccccCChhh
Confidence            99999999999876

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.95  E-value=1.4e-09  Score=95.81  Aligned_cols=90  Identities=27%  Similarity=0.395  Sum_probs=67.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh--------ccccCCCcccc------------CCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ--------AMLSGVNLSEL------------MPSASKDA   60 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~--------~~~~~~~l~~~------------~~~~s~~~   60 (216)
                      ||||++|+.+|.+.+..+.+..+++.+|.+..+.+......        +......+...            ....+.++
T Consensus       208 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (355)
T cd07874         208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA  287 (355)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHH
Confidence            58999999999999999999999999999887766432211        11111111111            11245688


Q ss_pred             HHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           61 INLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        61 ~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+||.+||.+||.+|+|+.|+|+||||...
T Consensus       288 ~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         288 RDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             HHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence            999999999999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.94  E-value=2e-09  Score=94.01  Aligned_cols=90  Identities=31%  Similarity=0.521  Sum_probs=73.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh---------ccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ---------AMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~---------~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+..+.+..++..+|.+..+.+......         .......+....+..+.++.+||.+||.+|
T Consensus       200 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  279 (332)
T cd07857         200 LAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFD  279 (332)
T ss_pred             HHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCC
Confidence            47899999999999999999999999999887765543221         122233445555667899999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.+++.||||.++
T Consensus       280 P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         280 PTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             cccCCCHHHHhcChhhhhh
Confidence            9999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.91  E-value=3.7e-09  Score=92.83  Aligned_cols=90  Identities=29%  Similarity=0.432  Sum_probs=69.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh-c-------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ-A-------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~-~-------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|+.+|.+.+..+.+..+++.+..+....+...... +       .....++..+++..+.++.+||.+||.+||
T Consensus       209 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  288 (342)
T cd07854         209 FAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNP  288 (342)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCc
Confidence            57999999999999988888888877666555444432211 1       122233445566788999999999999999


Q ss_pred             CCCCCHHHHHcCccccCC
Q 042950           73 CKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~   90 (216)
                      .+|+|+.++|+|+||+..
T Consensus       289 ~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         289 MDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             hhccCHHHHhCCCccccc
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.90  E-value=1.6e-09  Score=92.64  Aligned_cols=87  Identities=31%  Similarity=0.471  Sum_probs=64.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcccc--------CCCccccC--CCCCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS--------GVNLSELM--PSASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~--------~~~l~~~~--~~~s~~~~dLL~~mL~~   70 (216)
                      +|||++|+++|.+.+...++..|..++|..+.+.|+.........        .......+  ...+..+.|||.+||..
T Consensus       214 l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~  293 (310)
T cd07865         214 MAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVL  293 (310)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcC
Confidence            579999999999999888999999999987777665432221000        00000001  12467889999999999


Q ss_pred             CCCCCCCHHHHHcCccc
Q 042950           71 DPCKRPTAAEALQHLFF   87 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF   87 (216)
                      ||.+|+|++++|+||||
T Consensus       294 ~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         294 DPAKRIDADTALNHDFF  310 (310)
T ss_pred             ChhhccCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.89  E-value=1.4e-09  Score=91.83  Aligned_cols=87  Identities=34%  Similarity=0.668  Sum_probs=67.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh-----ccccCCCccccCCCCCHHHHHHHHhccccCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ-----AMLSGVNLSELMPSASKDAINLIESLCSWDPCKR   75 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~-----~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR   75 (216)
                      +|||++|+++|.+.++.+.+.+|+...+.+....|+.....     +......+....+..+.++.+||.+||..||.+|
T Consensus       196 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  275 (287)
T cd07838         196 FAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKR  275 (287)
T ss_pred             HHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccC
Confidence            57999999999999999999999998887766655432211     1222223344445677889999999999999999


Q ss_pred             CCHHHHHcCccc
Q 042950           76 PTAAEALQHLFF   87 (216)
Q Consensus        76 ~ta~eaL~HpfF   87 (216)
                      +++.++|+||||
T Consensus       276 p~~~~il~~~~~  287 (287)
T cd07838         276 ISAFEALQHPYF  287 (287)
T ss_pred             CCHHHHhcCcCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.89  E-value=1.3e-09  Score=91.82  Aligned_cols=87  Identities=37%  Similarity=0.599  Sum_probs=69.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCC-CHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSA-SKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~-s~~~~dLL~~mL~~d   71 (216)
                      ++||++|+++|.+.+..+++..+.+.++.+....|+....+.        ......+...+... +.++++||.+||.+|
T Consensus       192 l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  271 (287)
T cd07840         192 LAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLD  271 (287)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCC
Confidence            479999999999999999999999999999888876544331        11111222334443 889999999999999


Q ss_pred             CCCCCCHHHHHcCccc
Q 042950           72 PCKRPTAAEALQHLFF   87 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF   87 (216)
                      |.+||++.++++|+||
T Consensus       272 P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         272 PKKRISADQALQHEYF  287 (287)
T ss_pred             hhhCcCHHHHhhCcCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.89  E-value=2.2e-09  Score=91.66  Aligned_cols=87  Identities=29%  Similarity=0.500  Sum_probs=70.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcccc--------CCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS--------GVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~--------~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      ++||++|+++|...+..+.+..+.+.+|.+....|+.....+...        ...+...+..++..+.+||.+||..||
T Consensus       208 ~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  287 (302)
T cd07864         208 LGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDP  287 (302)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCCh
Confidence            479999999999999999999999999998888887554443111        112223344578899999999999999


Q ss_pred             CCCCCHHHHHcCccc
Q 042950           73 CKRPTAAEALQHLFF   87 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF   87 (216)
                      .+|+++.++|.||||
T Consensus       288 ~~Rp~~~~il~~~~~  302 (302)
T cd07864         288 SKRCTAEEALNSPWL  302 (302)
T ss_pred             hhCCCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.88  E-value=6.5e-09  Score=90.83  Aligned_cols=90  Identities=37%  Similarity=0.574  Sum_probs=73.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh---------ccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ---------AMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~---------~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+..+++.+++...|.+....|......         .......+...++..+.++.+||.+||..|
T Consensus       203 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  282 (337)
T cd07852         203 LGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFN  282 (337)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCC
Confidence            57999999999999999999999999998887766543221         122233444556668899999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |++|+|+.++|+|+||..+
T Consensus       283 P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         283 PNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             cccccCHHHHhhChhhhhh
Confidence            9999999999999999885

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.86  E-value=5.3e-09  Score=89.08  Aligned_cols=87  Identities=31%  Similarity=0.415  Sum_probs=66.3

Q ss_pred             CcccccCCCCCCCCC-HHHHHHHHHHhhCCCCHHHHHHHHhhccccC--------CCccccCC--CCCHHHHHHHHhccc
Q 042950            1 MAELLLFRPLFQGTD-EAEQMYKICSVLGNPTMDSWADELRQAMLSG--------VNLSELMP--SASKDAINLIESLCS   69 (216)
Q Consensus         1 L~ELltG~plF~g~s-~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~--------~~l~~~~~--~~s~~~~dLL~~mL~   69 (216)
                      |+||++|+++|.+.+ ..+++.++...+|.|....|.....++....        ..+.....  ..+.++.+||.+||.
T Consensus       194 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~  273 (291)
T cd07870         194 FIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLM  273 (291)
T ss_pred             HHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhC
Confidence            579999999998754 4578888999999998888876665542211        11111111  135788999999999


Q ss_pred             cCCCCCCCHHHHHcCccc
Q 042950           70 WDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        70 ~dP~kR~ta~eaL~HpfF   87 (216)
                      .||.+|+|+.|+|.||||
T Consensus       274 ~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         274 MFPKDRISAQDALLHPYF  291 (291)
T ss_pred             cCcccCcCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.86  E-value=2e-09  Score=96.24  Aligned_cols=73  Identities=34%  Similarity=0.486  Sum_probs=61.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||+.|..+|.|.+..+.+..|+.   .+..                +.+ .+.++..+.|||+++|+.||.+|+.   
T Consensus       325 lYEmLyG~TPFKG~~~~~Tl~NIv~---~~l~----------------Fp~-~~~vs~~akDLIr~LLvKdP~kRlg~~r  384 (459)
T KOG0610|consen  325 LYEMLYGTTPFKGSNNKETLRNIVG---QPLK----------------FPE-EPEVSSAAKDLIRKLLVKDPSKRLGSKR  384 (459)
T ss_pred             HHHHHhCCCCcCCCCchhhHHHHhc---CCCc----------------CCC-CCcchhHHHHHHHHHhccChhhhhcccc
Confidence            6999999999999999999988754   3211                111 1246789999999999999999998   


Q ss_pred             -HHHHHcCccccCCCCC
Q 042950           78 -AAEALQHLFFKRCLYA   93 (216)
Q Consensus        78 -a~eaL~HpfF~~~~~~   93 (216)
                       |+|+.+||||+.+.|.
T Consensus       385 GA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  385 GAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             chHHhhcCccccCCChh
Confidence             9999999999999997

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.86  E-value=6.3e-09  Score=91.06  Aligned_cols=89  Identities=36%  Similarity=0.487  Sum_probs=70.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh---------hccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR---------QAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~---------~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+....+..+.+.+|.++.+.+.....         ++.....+..+.++.++.++.+||.+||..|
T Consensus       196 l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  275 (328)
T cd07856         196 FAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFD  275 (328)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCC
Confidence            4799999999999998888899999999988766543211         1112223344455667899999999999999


Q ss_pred             CCCCCCHHHHHcCccccC
Q 042950           72 PCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~   89 (216)
                      |++|+|+.++|.|+||..
T Consensus       276 P~~R~t~~ell~~~~~~~  293 (328)
T cd07856         276 PQKRISAAEALAHPYLAP  293 (328)
T ss_pred             hhhCCCHHHHhcCCcccc
Confidence            999999999999999976

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.85  E-value=5.9e-09  Score=91.70  Aligned_cols=90  Identities=33%  Similarity=0.502  Sum_probs=70.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh---------hccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR---------QAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~---------~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+..+.+..++++.+.+..+.+.....         ++......+..+.+.++.++.+||.+||..|
T Consensus       206 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  285 (343)
T cd07880         206 MAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLD  285 (343)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCC
Confidence            4799999999999998899999999888776654433221         1122223344445678899999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.+++.||||+.+
T Consensus       286 P~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         286 AESRITAAEALAHPYFEEF  304 (343)
T ss_pred             hhhCCCHHHHhcCccHhhh
Confidence            9999999999999999974

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.85  E-value=6.3e-09  Score=91.59  Aligned_cols=89  Identities=34%  Similarity=0.474  Sum_probs=70.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHH---------hhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---------RQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~---------~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ++||++|+++|.+.+....+..++...+.+....+....         .++......+...+...++++.+||.+||..|
T Consensus       208 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  287 (345)
T cd07877         208 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD  287 (345)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCC
Confidence            479999999999998888999999988887766554221         11223333444444457889999999999999


Q ss_pred             CCCCCCHHHHHcCccccC
Q 042950           72 PCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~   89 (216)
                      |.+|+++.++|+||||..
T Consensus       288 p~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         288 SDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             hhhcCCHHHHhcChhhhh
Confidence            999999999999999997

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.84  E-value=5.8e-09  Score=88.27  Aligned_cols=87  Identities=28%  Similarity=0.414  Sum_probs=63.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc---------cccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA---------MLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~---------~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ++||++|+++|.+.+..+++..+..+.+......-......+         ......+....+.++..+.+||.+||..|
T Consensus       191 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  270 (286)
T cd07846         191 VTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRID  270 (286)
T ss_pred             HHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCC
Confidence            579999999999999899999999888865432211111111         01111222334567899999999999999


Q ss_pred             CCCCCCHHHHHcCccc
Q 042950           72 PCKRPTAAEALQHLFF   87 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF   87 (216)
                      |++||++.++|+|+||
T Consensus       271 P~~Rp~~~~il~~~~~  286 (286)
T cd07846         271 PDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cccchhHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.83  E-value=5.6e-09  Score=88.21  Aligned_cols=87  Identities=26%  Similarity=0.383  Sum_probs=63.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHH--------hhc-cccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL--------RQA-MLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~--------~~~-~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ++||++|+++|.+.+..+.+..+...++...........        ..+ .....++...++.++..+.+||.+||..|
T Consensus       191 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  270 (286)
T cd07847         191 FAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMD  270 (286)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCC
Confidence            479999999999999888888888777754332111000        000 11112233345567899999999999999


Q ss_pred             CCCCCCHHHHHcCccc
Q 042950           72 PCKRPTAAEALQHLFF   87 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF   87 (216)
                      |++||++.|+|.||||
T Consensus       271 p~~Rp~~~eil~~~~f  286 (286)
T cd07847         271 PTERLSCEELLEHPYF  286 (286)
T ss_pred             ccccCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.83  E-value=1.2e-09  Score=93.70  Aligned_cols=71  Identities=34%  Similarity=0.331  Sum_probs=57.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||-|+.|.|+|.-....-+|..|++---.-..+.|.                  +++.+..|||.+||+.||.+|+|++|
T Consensus       218 myTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWa------------------dis~~~KdLIsrlLqVdp~~Ritake  279 (411)
T KOG0599|consen  218 MYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWA------------------DISATVKDLISRLLQVDPTKRITAKE  279 (411)
T ss_pred             HHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchh------------------hccccHHHHHHHHHeeCchhcccHHH
Confidence            467889999998776667777787633333344554                  57889999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||..
T Consensus       280 ~LaHpff~q  288 (411)
T KOG0599|consen  280 ALAHPFFIQ  288 (411)
T ss_pred             HhcChHHHH
Confidence            999999965

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.79  E-value=4.1e-09  Score=94.94  Aligned_cols=89  Identities=18%  Similarity=0.123  Sum_probs=59.7

Q ss_pred             CcccccCCCCCCCC-------CHHHHHHHHHHhhCCCCHHHHH-------HHH-hhc-ccc-----CCCccccCCCCCHH
Q 042950            1 MAELLLFRPLFQGT-------DEAEQMYKICSVLGNPTMDSWA-------DEL-RQA-MLS-----GVNLSELMPSASKD   59 (216)
Q Consensus         1 L~ELltG~plF~g~-------s~~dql~~I~~ilG~p~~~~~~-------~~~-~~~-~~~-----~~~l~~~~~~~s~~   59 (216)
                      ||||++|+.+|.+.       +...++..|+..+|.++.+...       ... ... ...     ...+.. ...++.+
T Consensus       273 l~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  351 (391)
T PHA03212        273 LFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTN-LYELPID  351 (391)
T ss_pred             HHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHH-Hhhhhhh
Confidence            58999999666432       3457899999999986543211       000 000 000     001111 1235678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           60 AINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        60 ~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      +.+||.+||.+||.+|+||.|+|+||||.++
T Consensus       352 l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        352 LEYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence            9999999999999999999999999999884

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.78  E-value=2.5e-09  Score=92.23  Aligned_cols=100  Identities=22%  Similarity=0.194  Sum_probs=81.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCC-CCCHHHHHHHHhccccCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMP-SASKDAINLIESLCSWDPCKRP---   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~kR~---   76 (216)
                      +|||+.|+|||.+.+......+|++  |..                     .|| ..+.++.|||+++|+.|=.+|.   
T Consensus       231 IYEMlaG~pPF~~~~~~~iY~KI~~--~~v---------------------~fP~~fs~~~kdLl~~LL~vD~t~R~gnl  287 (355)
T KOG0616|consen  231 IYEMLAGYPPFYDDNPIQIYEKILE--GKV---------------------KFPSYFSSDAKDLLKKLLQVDLTKRFGNL  287 (355)
T ss_pred             HHHHHcCCCCCcCCChHHHHHHHHh--Ccc---------------------cCCcccCHHHHHHHHHHHhhhhHhhhcCc
Confidence            5899999999999999888899977  321                     123 4789999999999999999996   


Q ss_pred             --CHHHHHcCccccCCCCCCCCCCCCcc--ccchhhhhhhhhccccCCcCC
Q 042950           77 --TAAEALQHLFFKRCLYAPPHIRSVPA--VATTTRGMLKQQGAGIEAEAL  123 (216)
Q Consensus        77 --ta~eaL~HpfF~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  123 (216)
                        ...++..||||+++.|.....+...+  +++...+..|.+++..|+...
T Consensus       288 knG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~~~gdtsnfd~y~e~~  338 (355)
T KOG0616|consen  288 KNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIHGPGDTSNFDDYEEED  338 (355)
T ss_pred             CCCccccccCcccccccHHHHhhccccCCCCCccccCCccccccccccccc
Confidence              47899999999999998877776554  445677888888777777643

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.78  E-value=7.4e-09  Score=87.59  Aligned_cols=87  Identities=32%  Similarity=0.445  Sum_probs=65.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccC---------CCccccCCC-CCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSG---------VNLSELMPS-ASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~---------~~l~~~~~~-~s~~~~dLL~~mL~~   70 (216)
                      ||||++|+++|.+.+..+.+..+...+|......+...........         ..+...++. ++.++.+||.+||..
T Consensus       192 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  271 (288)
T cd07833         192 MAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRM  271 (288)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhcc
Confidence            5799999999999999999999999888766655443222111111         112222333 488999999999999


Q ss_pred             CCCCCCCHHHHHcCccc
Q 042950           71 DPCKRPTAAEALQHLFF   87 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF   87 (216)
                      ||++|+|+.++++|+||
T Consensus       272 ~p~~Rps~~~il~~~~f  288 (288)
T cd07833         272 DPKERLTCDELLQHPYF  288 (288)
T ss_pred             CchhcccHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.75  E-value=7.7e-09  Score=93.27  Aligned_cols=72  Identities=36%  Similarity=0.398  Sum_probs=59.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|.|++|.++|.+.++...+.+|...--....+.|                  +.++..+.|||.+||..||.+|+||.+
T Consensus       228 ~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w------------------~~is~~akd~i~~ll~~dp~~R~ta~~  289 (382)
T KOG0032|consen  228 LYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPW------------------DDISESAKDFIRKLLEFDPRKRLTAAQ  289 (382)
T ss_pred             HHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCc------------------cccCHHHHHHHHHhcccCcccCCCHHH
Confidence            47899999999999988888888653222233333                  468999999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+|||+++.
T Consensus       290 ~L~HpWi~~~  299 (382)
T KOG0032|consen  290 ALQHPWIKSI  299 (382)
T ss_pred             HhcCccccCC
Confidence            9999999873

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.75  E-value=9.8e-09  Score=87.99  Aligned_cols=72  Identities=24%  Similarity=0.241  Sum_probs=56.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+.+|.+.+..+....|..  +.+.                    +....+..+.+||++||+.||.+|++   
T Consensus       188 l~~l~~g~~pf~~~~~~~~~~~i~~--~~~~--------------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~  245 (291)
T cd05612         188 IYEMLVGYPPFFDDNPFGIYEKILA--GKLE--------------------FPRHLDLYAKDLIKKLLVVDRTRRLGNMK  245 (291)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHh--CCcC--------------------CCccCCHHHHHHHHHHcCCCHHHccCCcc
Confidence            5899999999998887776666654  2210                    11235789999999999999999995   


Q ss_pred             --HHHHHcCccccCCCCCC
Q 042950           78 --AAEALQHLFFKRCLYAP   94 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~   94 (216)
                        +.++++|+||....+..
T Consensus       246 ~~~~~~l~h~~~~~~~~~~  264 (291)
T cd05612         246 NGADDVKNHRWFKSVDWDD  264 (291)
T ss_pred             CCHHHHhcCccccCCCHHH
Confidence              99999999999876654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.74  E-value=7.2e-09  Score=96.59  Aligned_cols=71  Identities=27%  Similarity=0.343  Sum_probs=55.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.||......   ..|...++.+...                    ..+|.+|+|||++||++||.+|+++.+
T Consensus       503 Ly~ML~G~tp~~~~P~~---~ei~~~i~~~~~s--------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~  559 (612)
T KOG0603|consen  503 LYEMLTGRTLFAAHPAG---IEIHTRIQMPKFS--------------------ECVSDEAKDLLQQLLQVDPALRLGADE  559 (612)
T ss_pred             HHHHHhCCCccccCCch---HHHHHhhcCCccc--------------------cccCHHHHHHHHHhccCChhhCcChhh
Confidence            69999999999876554   3344444544332                    248999999999999999999999999


Q ss_pred             HHcCccccCCCCCC
Q 042950           81 ALQHLFFKRCLYAP   94 (216)
Q Consensus        81 aL~HpfF~~~~~~~   94 (216)
                      ++.|+||.+.+..+
T Consensus       560 i~~h~w~~~~~t~p  573 (612)
T KOG0603|consen  560 IGAHPWFLSHPTFP  573 (612)
T ss_pred             hccCcchhcCCCCC
Confidence            99999995544433

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.72  E-value=9.6e-09  Score=92.17  Aligned_cols=94  Identities=15%  Similarity=0.162  Sum_probs=63.8

Q ss_pred             CcccccCCCCCCCC---CHHHHHHHHHHhhCCCCHHHH--------HHHHhhc--cccCCCccccCC--CCCHHHHHHHH
Q 042950            1 MAELLLFRPLFQGT---DEAEQMYKICSVLGNPTMDSW--------ADELRQA--MLSGVNLSELMP--SASKDAINLIE   65 (216)
Q Consensus         1 L~ELltG~plF~g~---s~~dql~~I~~ilG~p~~~~~--------~~~~~~~--~~~~~~l~~~~~--~~s~~~~dLL~   65 (216)
                      ||||++|+.+|.+.   +..+++..|++.++..+.+..        .....+.  ......+...+.  ..+.++.+||.
T Consensus       277 l~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  356 (392)
T PHA03207        277 LFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIA  356 (392)
T ss_pred             HHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHH
Confidence            58999999999764   356788899988886443211        1111111  111112222221  35678999999


Q ss_pred             hccccCCCCCCCHHHHHcCccccCCCCCC
Q 042950           66 SLCSWDPCKRPTAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        66 ~mL~~dP~kR~ta~eaL~HpfF~~~~~~~   94 (216)
                      +||++||.+|+|+.|+|.||||...++..
T Consensus       357 ~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~  385 (392)
T PHA03207        357 KMLTFDQEFRPSAQDILSLPLFTKEPINL  385 (392)
T ss_pred             HHhccChhhCCCHHHHhhCchhhccchhh
Confidence            99999999999999999999998854443

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.71  E-value=1.3e-08  Score=88.94  Aligned_cols=71  Identities=21%  Similarity=0.215  Sum_probs=55.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+++|.+.+..+.+..|..  |.+.                 +   -..++.++.+||.+||..||.+|++   
T Consensus       205 l~elltg~~pf~~~~~~~~~~~i~~--~~~~-----------------~---p~~~~~~~~~li~~~L~~dP~~R~~~~~  262 (329)
T PTZ00263        205 LYEFIAGYPPFFDDTPFRIYEKILA--GRLK-----------------F---PNWFDGRARDLVKGLLQTDHTKRLGTLK  262 (329)
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHhc--CCcC-----------------C---CCCCCHHHHHHHHHHhhcCHHHcCCCCC
Confidence            5899999999998877666666543  2211                 0   1136788999999999999999997   


Q ss_pred             --HHHHHcCccccCCCCC
Q 042950           78 --AAEALQHLFFKRCLYA   93 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~   93 (216)
                        +.+++.||||.+..|.
T Consensus       263 ~~~~~ll~hp~f~~~~~~  280 (329)
T PTZ00263        263 GGVADVKNHPYFHGANWD  280 (329)
T ss_pred             CCHHHHhcCCccCCCCHH
Confidence              7999999999986554

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.69  E-value=1.7e-08  Score=92.58  Aligned_cols=107  Identities=21%  Similarity=0.273  Sum_probs=88.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      +|||++|.|||.|-+.......|++-+     +.|.               +-..++..+.+||+++|+.+|.+|+.   
T Consensus       609 i~ELL~G~pPFs~~dpmktYn~ILkGi-----d~i~---------------~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~  668 (732)
T KOG0614|consen  609 IYELLTGSPPFSGVDPMKTYNLILKGI-----DKIE---------------FPRRITKTATDLIKKLCRDNPTERLGYQK  668 (732)
T ss_pred             HHHHHcCCCCCCCCchHHHHHHHHhhh-----hhhh---------------cccccchhHHHHHHHHHhcCcHhhhcccc
Confidence            589999999999999988888887732     2222               11357889999999999999999996   


Q ss_pred             --HHHHHcCccccCCCCCCCCCCCCcc-ccchhhhhhhhhccccCCcCCCCCC
Q 042950           78 --AAEALQHLFFKRCLYAPPHIRSVPA-VATTTRGMLKQQGAGIEAEALPNPN  127 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  127 (216)
                        +.++-.|.||..+.|.....+...+ +.+.++...|.+++..++....-++
T Consensus       669 ~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~~p~dnd~pp  721 (732)
T KOG0614|consen  669 GGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDNFPPDNDEPP  721 (732)
T ss_pred             CChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccchhccCCCcccCCCC
Confidence              8999999999999999888777655 7788899999999999987654444

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.68  E-value=1.1e-08  Score=89.11  Aligned_cols=71  Identities=21%  Similarity=0.334  Sum_probs=56.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      +|||++|+.+|.+.+..+.+..|..  +.+.                    .....+.++.+||.+||..||.+|+++  
T Consensus       186 l~el~~g~~Pf~~~~~~~~~~~i~~--~~~~--------------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~  243 (320)
T cd05590         186 LYEMLCGHAPFEAENEDDLFEAILN--DEVV--------------------YPTWLSQDAVDILKAFMTKNPTMRLGSLT  243 (320)
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHhc--CCCC--------------------CCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            5899999999999888777776654  2111                    012368899999999999999999998  


Q ss_pred             ----HHHHcCccccCCCCC
Q 042950           79 ----AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 ----~eaL~HpfF~~~~~~   93 (216)
                          .++++||||..+.|.
T Consensus       244 ~~~~~~~~~h~~f~~~~~~  262 (320)
T cd05590         244 LGGEEAILRHPFFKELDWE  262 (320)
T ss_pred             CCCHHHHHcCCCcCCCCHH
Confidence                999999999986554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.67  E-value=2.9e-08  Score=87.56  Aligned_cols=72  Identities=21%  Similarity=0.195  Sum_probs=57.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      +|||++|+++|.+.+.......|....-.                      +-...++++.+||++||..||.+|+    
T Consensus       218 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~----------------------~p~~~~~~~~~li~~~l~~dp~~R~~~~~  275 (340)
T PTZ00426        218 IYEILVGCPPFYANEPLLIYQKILEGIIY----------------------FPKFLDNNCKHLMKKLLSHDLTKRYGNLK  275 (340)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHhcCCCC----------------------CCCCCCHHHHHHHHHHcccCHHHcCCCCC
Confidence            58999999999988877666666542110                      1124678999999999999999996    


Q ss_pred             -CHHHHHcCccccCCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~   94 (216)
                       +++++++||||....|..
T Consensus       276 ~~~~~~~~hp~f~~~~~~~  294 (340)
T PTZ00426        276 KGAQNVKEHPWFGNIDWVS  294 (340)
T ss_pred             CCHHHHHcCCCcCCCCHHH
Confidence             899999999999876643

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.67  E-value=4.1e-08  Score=85.55  Aligned_cols=72  Identities=25%  Similarity=0.283  Sum_probs=55.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+.+|.+.+....+..|..  +..                    .+-..+++++.+||.+||..||++|+    
T Consensus       185 l~elltg~~Pf~~~~~~~~~~~~~~--~~~--------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~  242 (323)
T cd05571         185 MYEMMCGRLPFYNQDHEKLFELILM--EEI--------------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGP  242 (323)
T ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHc--CCC--------------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCC
Confidence            6899999999988776555555432  111                    01124789999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~   94 (216)
                       ++.++|+|+||....|..
T Consensus       243 ~~~~~ll~h~~f~~~~~~~  261 (323)
T cd05571         243 EDAKEIMEHRFFASINWQD  261 (323)
T ss_pred             CCHHHHHcCCCcCCCCHHH
Confidence             899999999999865543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.66  E-value=8e-09  Score=90.94  Aligned_cols=80  Identities=29%  Similarity=0.357  Sum_probs=65.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCC-CCHHHHHHHHhccccCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPS-ASKDAINLIESLCSWDPCKRP---   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~-~s~~~~dLL~~mL~~dP~kR~---   76 (216)
                      +|||++|.|||.+.+......+|...-. +                     ..+. .+.+++|||+++|+.||.+|+   
T Consensus       215 lYeML~G~pPF~~~~~~~~~~~I~~~k~-~---------------------~~p~~ls~~ardll~~LL~rdp~~RLg~~  272 (357)
T KOG0598|consen  215 LYEMLTGKPPFYAEDVKKMYDKILKGKL-P---------------------LPPGYLSEEARDLLKKLLKRDPRQRLGGP  272 (357)
T ss_pred             HHHHhhCCCCCcCccHHHHHHHHhcCcC-C---------------------CCCccCCHHHHHHHHHHhccCHHHhcCCC
Confidence            5899999999999998888888876211 1                     1233 789999999999999999997   


Q ss_pred             -CHHHHHcCccccCCCCCCCCCCCCcc
Q 042950           77 -TAAEALQHLFFKRCLYAPPHIRSVPA  102 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~~~~~~~~~  102 (216)
                       .+.++-+||||..+.|.....+...+
T Consensus       273 ~d~~~ik~HpfF~~inW~~l~~k~l~P  299 (357)
T KOG0598|consen  273 GDAEEIKRHPFFKGINWEKLLAKKLSP  299 (357)
T ss_pred             CChHHhhcCcccccCCHHHHHhcCCCC
Confidence             58999999999999998776665554

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.66  E-value=3.2e-08  Score=93.03  Aligned_cols=74  Identities=24%  Similarity=0.315  Sum_probs=60.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||.||+|+.+|.+++-...|.++..  |..                    ++-.+++.+|.|||.+||.+||.+|+|.+|
T Consensus       202 LfALLtG~LPFdDdNir~LLlKV~~--G~f--------------------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~e  259 (786)
T KOG0588|consen  202 LFALLTGKLPFDDDNIRVLLLKVQR--GVF--------------------EMPSNISSEAQDLLRRMLDVDPSTRITTEE  259 (786)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHc--Ccc--------------------cCCCcCCHHHHHHHHHHhccCccccccHHH
Confidence            5789999999997776667777755  431                    112368999999999999999999999999


Q ss_pred             HHcCccccCCCCCCCC
Q 042950           81 ALQHLFFKRCLYAPPH   96 (216)
Q Consensus        81 aL~HpfF~~~~~~~~~   96 (216)
                      +++|||+..+.-.+..
T Consensus       260 I~kHP~l~g~~~~~~~  275 (786)
T KOG0588|consen  260 ILKHPFLSGYTSLPSS  275 (786)
T ss_pred             HhhCchhhcCCCCChh
Confidence            9999999987765544

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.65  E-value=2.9e-08  Score=86.85  Aligned_cols=75  Identities=29%  Similarity=0.301  Sum_probs=57.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC-HH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT-AA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t-a~   79 (216)
                      ||||++|+.+|.+.+..+....|........                 +.. ...+++++.+||.+||. ||.+|++ +.
T Consensus       220 l~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~-----------------~p~-~~~~~~~~~~li~~ll~-dp~~R~~s~~  280 (350)
T cd05573         220 LYEMLYGFPPFYSDTLQETYNKIINWKESLR-----------------FPP-DPPVSPEAIDLICRLLC-DPEDRLGSFE  280 (350)
T ss_pred             hhhhccCCCCCCCCCHHHHHHHHhccCCccc-----------------CCC-CCCCCHHHHHHHHHHcc-ChhhcCCCHH
Confidence            6899999999998887776666655222110                 000 11268999999999998 9999999 99


Q ss_pred             HHHcCccccCCCCCC
Q 042950           80 EALQHLFFKRCLYAP   94 (216)
Q Consensus        80 eaL~HpfF~~~~~~~   94 (216)
                      ++|+||||..+.+..
T Consensus       281 ~ll~hp~~~~~~~~~  295 (350)
T cd05573         281 EIKSHPFFKGIDWEN  295 (350)
T ss_pred             HHhcCCCcCCCCHHH
Confidence            999999999876643

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.64  E-value=1.4e-08  Score=86.69  Aligned_cols=75  Identities=21%  Similarity=0.216  Sum_probs=54.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+++|.+.++......+...+....                  ..+....+.++.+||.+||..||.+|++   
T Consensus       191 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~  252 (285)
T cd05631         191 IYEMIQGQSPFRKRKERVKREEVDRRVKEDQ------------------EEYSEKFSEDAKSICRMLLTKNPKERLGCRG  252 (285)
T ss_pred             HHHHHhCCCCCCCCCcchhHHHHHHHhhccc------------------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCC
Confidence            5799999999988765443333333221110                  1112357899999999999999999997   


Q ss_pred             --HHHHHcCccccCCCCC
Q 042950           78 --AAEALQHLFFKRCLYA   93 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~   93 (216)
                        ++++++||||.+..+.
T Consensus       253 ~~~~~~~~h~~~~~~~~~  270 (285)
T cd05631         253 NGAAGVKQHPIFKNINFK  270 (285)
T ss_pred             CCHHHHhcCHhhcCCCHH
Confidence              8999999999986543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.61  E-value=3.8e-08  Score=87.70  Aligned_cols=75  Identities=23%  Similarity=0.211  Sum_probs=57.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCC--CCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCK--RPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k--R~ta   78 (216)
                      ||||++|+++|.+.+....+.+|+.......                 +.. ...++.++.+||.+||..+|.+  |+|+
T Consensus       237 lyelltG~~Pf~~~~~~~~~~~i~~~~~~~~-----------------~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~  298 (370)
T cd05596         237 LYEMLVGDTPFYADSLVGTYSKIMDHKNSLT-----------------FPD-DIEISKQAKDLICAFLTDREVRLGRNGV  298 (370)
T ss_pred             HHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC-----------------CCC-cCCCCHHHHHHHHHHccChhhccCCCCH
Confidence            5899999999999888777777754221110                 000 1246899999999999999998  9999


Q ss_pred             HHHHcCccccCCCCC
Q 042950           79 AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 ~eaL~HpfF~~~~~~   93 (216)
                      .++|+||||+...|.
T Consensus       299 ~ell~h~~~~~~~~~  313 (370)
T cd05596         299 DEIKSHPFFKNDQWT  313 (370)
T ss_pred             HHHhcCcccCCCChh
Confidence            999999999986554

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.61  E-value=4.1e-08  Score=85.50  Aligned_cols=74  Identities=22%  Similarity=0.221  Sum_probs=56.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+....+..|+.......                 +. ..+.++.++.+||.+||. ||.+|+|+.+
T Consensus       199 l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-----------------~~-~~~~~~~~~~~li~~ll~-~p~~R~t~~~  259 (330)
T cd05601         199 AYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK-----------------FP-EDPKVSSDFLDLIQSLLC-GQKERLGYEG  259 (330)
T ss_pred             eeeeccCCCCCCCCCHHHHHHHHHcCCCccC-----------------CC-CCCCCCHHHHHHHHHHcc-ChhhCCCHHH
Confidence            6899999999998887777777765321100                 00 012478999999999998 9999999999


Q ss_pred             HHcCccccCCCCC
Q 042950           81 ALQHLFFKRCLYA   93 (216)
Q Consensus        81 aL~HpfF~~~~~~   93 (216)
                      +++||||....+.
T Consensus       260 l~~h~~~~~~~~~  272 (330)
T cd05601         260 LCCHPFFSKIDWN  272 (330)
T ss_pred             HhCCCCcCCCCHH
Confidence            9999999986544

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.60  E-value=3.9e-08  Score=85.53  Aligned_cols=72  Identities=24%  Similarity=0.330  Sum_probs=58.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      +|||++|+++|.+.+..+.+..|..  +...                    .-..++.++.+||.+||..||++|+    
T Consensus       186 l~el~tg~~Pf~~~~~~~~~~~i~~--~~~~--------------------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~  243 (321)
T cd05591         186 MYEMMAGQPPFEADNEDDLFESILH--DDVL--------------------YPVWLSKEAVSILKAFMTKNPNKRLGCVA  243 (321)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHc--CCCC--------------------CCCCCCHHHHHHHHHHhccCHHHcCCCCC
Confidence            5899999999999988888877754  2111                    0113678999999999999999999    


Q ss_pred             ---CHHHHHcCccccCCCCCC
Q 042950           77 ---TAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        77 ---ta~eaL~HpfF~~~~~~~   94 (216)
                         ++.++++||||....|..
T Consensus       244 ~~~~~~~~~~hp~~~~~~~~~  264 (321)
T cd05591         244 SQGGEDAIKQHPFFKEIDWVL  264 (321)
T ss_pred             CCCCHHHHhcCCccCCCCHHH
Confidence               899999999998866543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.60  E-value=5.4e-08  Score=90.43  Aligned_cols=67  Identities=34%  Similarity=0.414  Sum_probs=55.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||-||.|+|||..++-.+.+.+|...--.                      +-..++.+|.|||.+||..||.+|||+++
T Consensus       208 mYtLL~G~PPFetk~vkety~~Ik~~~Y~----------------------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~  265 (592)
T KOG0575|consen  208 MYTLLVGRPPFETKTVKETYNKIKLNEYS----------------------MPSHLSAEAKDLIRKLLRPNPSERPSLDE  265 (592)
T ss_pred             HHhhhhCCCCcccchHHHHHHHHHhcCcc----------------------cccccCHHHHHHHHHHhcCCcccCCCHHH
Confidence            58899999999988888888888542111                      01258999999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|.|+||+.
T Consensus       266 vL~h~Ff~~  274 (592)
T KOG0575|consen  266 VLDHPFFKS  274 (592)
T ss_pred             HhcCHhhhC
Confidence            999999954

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.60  E-value=3.5e-08  Score=87.94  Aligned_cols=74  Identities=27%  Similarity=0.351  Sum_probs=55.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+++|.+.+..+....|+........                 . ....+++++.+||.+||. ||.+|++   
T Consensus       238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-----------------p-~~~~~s~~~~~li~~l~~-~p~~R~~~~~  298 (382)
T cd05625         238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLHI-----------------P-PQAKLSPEASDLIIKLCR-GPEDRLGKNG  298 (382)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHccCCCcCC-----------------C-CcccCCHHHHHHHHHHcc-CHhHcCCCCC
Confidence            58999999999998877766666542211100                 0 012478999999999875 9999997   


Q ss_pred             HHHHHcCccccCCCCC
Q 042950           78 AAEALQHLFFKRCLYA   93 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~   93 (216)
                      +.++++||||..+.+.
T Consensus       299 ~~ei~~hp~f~~~~~~  314 (382)
T cd05625         299 ADEIKAHPFFKTIDFS  314 (382)
T ss_pred             HHHHhcCCCcCCcChH
Confidence            9999999999986654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.60  E-value=5.3e-08  Score=86.92  Aligned_cols=75  Identities=23%  Similarity=0.318  Sum_probs=54.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCC--CCCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPC--KRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~--kR~ta   78 (216)
                      ||||++|+++|.+.+..+....|+...+...                 +. ....+++++.+||.+||..++.  .|+++
T Consensus       238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-----------------~~-~~~~~s~~~~dli~~ll~~~~~~~~R~~~  299 (381)
T cd05626         238 LFEMLVGQPPFLAPTPTETQLKVINWENTLH-----------------IP-PQVKLSPEAVDLITKLCCSAEERLGRNGA  299 (381)
T ss_pred             HHHHHhCCCCCcCCCHHHHHHHHHccccccC-----------------CC-CCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence            5899999999998877666666654222110                 00 0124789999999998766555  49999


Q ss_pred             HHHHcCccccCCCCC
Q 042950           79 AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 ~eaL~HpfF~~~~~~   93 (216)
                      .++|+||||.+..+.
T Consensus       300 ~~~l~hp~f~~~~~~  314 (381)
T cd05626         300 DDIKAHPFFSEVDFS  314 (381)
T ss_pred             HHHhcCcccCCCChh
Confidence            999999999986553

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.57  E-value=3.5e-08  Score=85.56  Aligned_cols=73  Identities=23%  Similarity=0.256  Sum_probs=56.7

Q ss_pred             CcccccCCCCCCCCCH----HHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC
Q 042950            1 MAELLLFRPLFQGTDE----AEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~----~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~   76 (216)
                      ||-|++|.|+|+....    -++-.+|..---..+.+.|.                  .+|+++.|||++||+.+|.+|+
T Consensus       253 mYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs------------------~VSe~aKdlIR~LLkt~PteRl  314 (400)
T KOG0604|consen  253 MYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWS------------------CVSEAAKDLIRKLLKTEPTERL  314 (400)
T ss_pred             HHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHh------------------HHHHHHHHHHHHHhcCCchhhe
Confidence            5789999999987653    23445564422234455564                  5899999999999999999999


Q ss_pred             CHHHHHcCccccCCC
Q 042950           77 TAAEALQHLFFKRCL   91 (216)
Q Consensus        77 ta~eaL~HpfF~~~~   91 (216)
                      |+.+++.|||.....
T Consensus       315 TI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  315 TIEEVMDHPWINQYE  329 (400)
T ss_pred             eHHHhhcCchhcccc
Confidence            999999999999843

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.56  E-value=5.1e-08  Score=89.93  Aligned_cols=69  Identities=22%  Similarity=0.338  Sum_probs=59.5

Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHHH
Q 042950            2 AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEA   81 (216)
Q Consensus         2 ~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~ea   81 (216)
                      .||+-|+|+|-.++....|+.|.. -|+|.-..+                  ..+|+++.|||.+||+.|+.+|++|.|+
T Consensus       460 IEMveGEPPYlnE~PlrAlyLIa~-ng~P~lk~~------------------~klS~~~kdFL~~cL~~dv~~RasA~eL  520 (550)
T KOG0578|consen  460 IEMVEGEPPYLNENPLRALYLIAT-NGTPKLKNP------------------EKLSPELKDFLDRCLVVDVEQRASAKEL  520 (550)
T ss_pred             HHHhcCCCCccCCChHHHHHHHhh-cCCCCcCCc------------------cccCHHHHHHHHHHhhcchhcCCCHHHH
Confidence            599999999998888888888865 476654433                  3589999999999999999999999999


Q ss_pred             HcCccccC
Q 042950           82 LQHLFFKR   89 (216)
Q Consensus        82 L~HpfF~~   89 (216)
                      |+||||+.
T Consensus       521 L~HpFl~~  528 (550)
T KOG0578|consen  521 LEHPFLKM  528 (550)
T ss_pred             hcChhhhh
Confidence            99999965

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.56  E-value=1e-07  Score=81.94  Aligned_cols=91  Identities=31%  Similarity=0.448  Sum_probs=71.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCccccCC-----CCCHHHHHHHHhcc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLSELMP-----SASKDAINLIESLC   68 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~~~~~-----~~s~~~~dLL~~mL   68 (216)
                      ++||+-.+.||+..+.++||..|+++||+|+.+.....+.-.       ..+..++..++.     ....++++++.+||
T Consensus       248 FaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l  327 (449)
T KOG0664|consen  248 FAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLL  327 (449)
T ss_pred             HHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHh
Confidence            468999999999999999999999999999998876554432       112222333322     23467899999999


Q ss_pred             ccCCCCCCCHHHHHcCccccCCC
Q 042950           69 SWDPCKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        69 ~~dP~kR~ta~eaL~HpfF~~~~   91 (216)
                      .+||++|++.++++.|+|..+..
T Consensus       328 ~~d~dkris~~~A~~~~~~~e~R  350 (449)
T KOG0664|consen  328 HFDPDKRISVEEALQHRYLEEGR  350 (449)
T ss_pred             CCCCcccccHhhhcccccccccc
Confidence            99999999999999999998743

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.55  E-value=1.2e-07  Score=89.52  Aligned_cols=88  Identities=15%  Similarity=0.210  Sum_probs=58.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCcc---ccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLS---ELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~---~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||||+++  .|.+.++..++..++...+.. ...|.....-  .....+.   +++......+.|||.+||++||.+|+|
T Consensus       369 L~el~~~--~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t  443 (566)
T PLN03225        369 FLQMAFP--NLRSDSNLIQFNRQLKRNDYD-LVAWRKLVEP--RASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS  443 (566)
T ss_pred             HHHHHhC--cCCCchHHHHHHHHHHhcCCc-HHHHHHhhcc--ccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence            4788874  566677777888887776653 3344322110  1111111   122234556789999999999999999


Q ss_pred             HHHHHcCccccCCCCC
Q 042950           78 AAEALQHLFFKRCLYA   93 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~   93 (216)
                      +.++|+||||+.....
T Consensus       444 a~e~L~Hpff~~~~~~  459 (566)
T PLN03225        444 AKAALAHPYFDREGLL  459 (566)
T ss_pred             HHHHhCCcCcCCCCcc
Confidence            9999999999986554

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.55  E-value=6.5e-08  Score=80.80  Aligned_cols=74  Identities=32%  Similarity=0.418  Sum_probs=52.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      +|||++|.++|.+.+....+..+......     |             -......++.++.+||.+||..||++|+++  
T Consensus       183 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~  244 (260)
T cd05611         183 IFEFLFGYPPFHAETPDAVFDNILSRRIN-----W-------------PEEVKEFCSPEAVDLINRLLCMDPAKRLGANG  244 (260)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhcccC-----C-------------CCcccccCCHHHHHHHHHHccCCHHHccCCCc
Confidence            47899999999877665555444321100     0             001122478899999999999999999955  


Q ss_pred             -HHHHcCccccCCCC
Q 042950           79 -AEALQHLFFKRCLY   92 (216)
Q Consensus        79 -~eaL~HpfF~~~~~   92 (216)
                       +|+|.||||.+..|
T Consensus       245 ~~~~l~~~~~~~~~~  259 (260)
T cd05611         245 YQEIKSHPFFKSINW  259 (260)
T ss_pred             HHHHHcChHhhcCCC
Confidence             79999999988655

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.54  E-value=6.3e-08  Score=84.31  Aligned_cols=71  Identities=30%  Similarity=0.412  Sum_probs=57.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      ||||++|+++|.+.+..+.+..|......                      +...++.++.+||.+||..||.+|+++  
T Consensus       191 l~elltG~~pf~~~~~~~~~~~i~~~~~~----------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~  248 (324)
T cd05587         191 LYEMLAGQPPFDGEDEDELFQSIMEHNVS----------------------YPKSLSKEAVSICKGLLTKHPAKRLGCGP  248 (324)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCC----------------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCC
Confidence            58999999999998887777777542211                      112468899999999999999999976  


Q ss_pred             ---HHHHcCccccCCCCC
Q 042950           79 ---AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 ---~eaL~HpfF~~~~~~   93 (216)
                         .++++||||....|.
T Consensus       249 ~~~~~~~~hp~~~~~~~~  266 (324)
T cd05587         249 TGERDIREHAFFRRIDWE  266 (324)
T ss_pred             CCHHHHhcCCCcCCCCHH
Confidence               899999999986654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.54  E-value=8.7e-08  Score=82.64  Aligned_cols=79  Identities=30%  Similarity=0.357  Sum_probs=59.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      +|||++|+.+|.+.+....+..+...-..                   +.. ....+.++.+||.+||..||++|+|   
T Consensus       222 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~-~~~~~~~~~~li~~~l~~~p~~R~s~~~  281 (316)
T cd05574         222 LYEMLYGTTPFKGSNRDETFSNILKKEVT-------------------FPG-SPPVSSSARDLIRKLLVKDPSKRLGSKR  281 (316)
T ss_pred             HHHHhhCCCCCCCCchHHHHHHHhcCCcc-------------------CCC-ccccCHHHHHHHHHHccCCHhHCCCchh
Confidence            57899999999888877776665431100                   000 1126789999999999999999999   


Q ss_pred             -HHHHHcCccccCCCCCCCCCCC
Q 042950           78 -AAEALQHLFFKRCLYAPPHIRS   99 (216)
Q Consensus        78 -a~eaL~HpfF~~~~~~~~~~~~   99 (216)
                       ++++|+|+||+...|.-..+..
T Consensus       282 ~~~~ll~~~~~~~~~~~~~~~~~  304 (316)
T cd05574         282 GAAEIKQHPFFRGVNWALIRHTT  304 (316)
T ss_pred             hHHHHHcCchhhcCChhhcccCC
Confidence             9999999999998776655533

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.53  E-value=1.1e-07  Score=82.39  Aligned_cols=69  Identities=29%  Similarity=0.320  Sum_probs=53.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC---C
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP---T   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~---t   77 (216)
                      +|||++|+++|.+.+....+..++.  +..                    .+...+++++.+||.+||.+||.+|+   +
T Consensus       183 l~el~tg~~pf~~~~~~~~~~~~~~--~~~--------------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~  240 (312)
T cd05585         183 LYEMLTGLPPFYDENVNEMYRKILQ--EPL--------------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNG  240 (312)
T ss_pred             HHHHHhCCCCcCCCCHHHHHHHHHc--CCC--------------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence            5899999999998776666555543  111                    01134788999999999999999997   5


Q ss_pred             HHHHHcCccccCCC
Q 042950           78 AAEALQHLFFKRCL   91 (216)
Q Consensus        78 a~eaL~HpfF~~~~   91 (216)
                      +.++|.||||....
T Consensus       241 ~~e~l~hp~~~~~~  254 (312)
T cd05585         241 AQEIKNHPFFSQLS  254 (312)
T ss_pred             HHHHHcCCCcCCCC
Confidence            89999999999853

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.53  E-value=6.4e-08  Score=84.16  Aligned_cols=71  Identities=25%  Similarity=0.316  Sum_probs=55.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      +|||++|+.+|.+.+..+.+..|...  .+.                    +-..++.++.+||.+||..||.+|+++  
T Consensus       186 l~~l~~G~~pf~~~~~~~~~~~i~~~--~~~--------------------~~~~~~~~~~~li~~~l~~dP~~R~s~~~  243 (318)
T cd05570         186 LYEMLAGQSPFEGDDEDELFQSILED--EVR--------------------YPRWLSKEAKSILKSFLTKNPEKRLGCLP  243 (318)
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHcC--CCC--------------------CCCcCCHHHHHHHHHHccCCHHHcCCCCC
Confidence            57999999999988776666555431  110                    012367899999999999999999999  


Q ss_pred             ---HHHHcCccccCCCCC
Q 042950           79 ---AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 ---~eaL~HpfF~~~~~~   93 (216)
                         .++++||||....|.
T Consensus       244 ~~~~~ll~~~~~~~~~~~  261 (318)
T cd05570         244 TGEQDIKGHPFFREIDWD  261 (318)
T ss_pred             CCHHHHhcCCCcCCCCHH
Confidence               999999999986553

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.53  E-value=5e-08  Score=87.75  Aligned_cols=95  Identities=23%  Similarity=0.282  Sum_probs=75.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccC-CCCCHHHHHHHHhccccCCCCCCCH-
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELM-PSASKDAINLIESLCSWDPCKRPTA-   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~-~~~s~~~~dLL~~mL~~dP~kR~ta-   78 (216)
                      ||||+.|+|+|.|.++.+.+..|.+---.                       + ..+|.+++++++.+|...|.+|+.+ 
T Consensus       540 LyEmlaGQpPFdGeDE~elF~aI~ehnvs-----------------------yPKslSkEAv~ickg~ltK~P~kRLGcg  596 (683)
T KOG0696|consen  540 LYEMLAGQPPFDGEDEDELFQAIMEHNVS-----------------------YPKSLSKEAVAICKGLLTKHPGKRLGCG  596 (683)
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHHccCc-----------------------CcccccHHHHHHHHHHhhcCCccccCCC
Confidence            68999999999999999999999873221                       2 2479999999999999999999975 


Q ss_pred             ----HHHHcCccccCCCCCCCCCCCCcc-ccchhhhhhhhhcccc
Q 042950           79 ----AEALQHLFFKRCLYAPPHIRSVPA-VATTTRGMLKQQGAGI  118 (216)
Q Consensus        79 ----~eaL~HpfF~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  118 (216)
                          .++-.||||+.+.|...+.+...+ +.+..+...+..++++
T Consensus       597 ~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~eNFD~  641 (683)
T KOG0696|consen  597 PEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCGRDAENFDK  641 (683)
T ss_pred             CccccchhhCcchhhccHHHHhhccCCCCCCCccccCCchhhhhH
Confidence                789999999999998777666554 5555555555555444

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.53  E-value=5.3e-08  Score=84.74  Aligned_cols=71  Identities=25%  Similarity=0.398  Sum_probs=54.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH-
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA-   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~-   79 (216)
                      +|||++|+.+|.+.+..+.+..|..  +.+..                    -...+.++.+||.+||..||.+|+++. 
T Consensus       186 l~el~~G~~pf~~~~~~~~~~~i~~--~~~~~--------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~  243 (316)
T cd05619         186 LYEMLIGQSPFHGHDEEELFQSIRM--DNPCY--------------------PRWLTREAKDILVKLFVREPERRLGVKG  243 (316)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHh--CCCCC--------------------CccCCHHHHHHHHHHhccCHhhcCCChH
Confidence            5899999999998876665555432  21110                    113678999999999999999999996 


Q ss_pred             HHHcCccccCCCCC
Q 042950           80 EALQHLFFKRCLYA   93 (216)
Q Consensus        80 eaL~HpfF~~~~~~   93 (216)
                      ++++||||..+.|.
T Consensus       244 ~l~~h~~~~~~~~~  257 (316)
T cd05619         244 DIRQHPFFREIDWS  257 (316)
T ss_pred             HHHcCcccCCCCHH
Confidence            89999999986654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.53  E-value=1.1e-07  Score=84.16  Aligned_cols=35  Identities=26%  Similarity=0.424  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++.++.+||.+||.+||.+||||.|+|+||||++
T Consensus       322 ~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        322 NLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence            36778899999999999999999999999999986

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.52  E-value=4.9e-08  Score=84.87  Aligned_cols=71  Identities=27%  Similarity=0.411  Sum_probs=54.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH-H
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA-A   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta-~   79 (216)
                      +|||++|+.+|.+.+....+..|..  +.+..                    -..++.++.+||.+||..||.+|+++ +
T Consensus       186 l~el~~g~~Pf~~~~~~~~~~~~~~--~~~~~--------------------~~~~~~~~~~li~~~l~~dP~~R~~~~~  243 (316)
T cd05620         186 LYEMLIGQSPFHGDDEDELFESIRV--DTPHY--------------------PRWITKESKDILEKLFERDPTRRLGVVG  243 (316)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHh--CCCCC--------------------CCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence            5899999999998877665555532  22210                    11368899999999999999999997 5


Q ss_pred             HHHcCccccCCCCC
Q 042950           80 EALQHLFFKRCLYA   93 (216)
Q Consensus        80 eaL~HpfF~~~~~~   93 (216)
                      ++++||||....+.
T Consensus       244 ~~~~h~~f~~~~~~  257 (316)
T cd05620         244 NIRGHPFFKTINWT  257 (316)
T ss_pred             HHHcCCCcCCCCHH
Confidence            88899999886543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.52  E-value=6.6e-08  Score=84.95  Aligned_cols=70  Identities=30%  Similarity=0.408  Sum_probs=51.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +.||+||+++|...  .+....++.+.-...                 ...+...+++++.|||.+||.+||.+|+||.+
T Consensus       212 VvEM~Tg~~PW~~~--~~~~~~~~~ig~~~~-----------------~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~e  272 (313)
T KOG0198|consen  212 VVEMLTGKPPWSEF--FEEAEALLLIGREDS-----------------LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEE  272 (313)
T ss_pred             EEeccCCCCcchhh--cchHHHHHHHhccCC-----------------CCCCCcccCHHHHHHHHHHhhcCcccCcCHHH
Confidence            36999999999763  233333333322111                 11223458999999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|.|||...
T Consensus       273 LL~hpf~~~  281 (313)
T KOG0198|consen  273 LLEHPFLKQ  281 (313)
T ss_pred             HhhChhhhc
Confidence            999999987

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.52  E-value=1.1e-07  Score=82.80  Aligned_cols=71  Identities=24%  Similarity=0.330  Sum_probs=56.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+.+|.+.+..+.+..|......                      ....++.++.+||.+||..||.+|+    
T Consensus       191 l~el~~G~~pf~~~~~~~~~~~i~~~~~~----------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~  248 (324)
T cd05589         191 IYEMLVGESPFPGDDEEEVFDSIVNDEVR----------------------YPRFLSREAISIMRRLLRRNPERRLGSGE  248 (324)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCC----------------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            58999999999998887777776542110                      1124688999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYA   93 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~   93 (216)
                       ++.++++|+||....+.
T Consensus       249 ~~~~~l~~~~~f~~~~~~  266 (324)
T cd05589         249 KDAEDVKKQPFFRDINWD  266 (324)
T ss_pred             CCHHHHhhCCCcCCCCHH
Confidence             69999999999886543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.51  E-value=1.5e-07  Score=81.91  Aligned_cols=71  Identities=32%  Similarity=0.356  Sum_probs=56.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      ||||++|+++|.+.+..+.+..|+.  +..                    .+.+..+.++.+||.+||+.||.+|+++  
T Consensus       186 l~ell~g~~pf~~~~~~~~~~~i~~--~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (323)
T cd05575         186 LYEMLYGLPPFYSRDTAEMYDNILN--KPL--------------------RLKPNISVSARHLLEGLLQKDRTKRLGAKD  243 (323)
T ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHc--CCC--------------------CCCCCCCHHHHHHHHHHhhcCHHhCCCCCC
Confidence            6899999999998877666666643  110                    1123568999999999999999999997  


Q ss_pred             --HHHHcCccccCCCCC
Q 042950           79 --AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 --~eaL~HpfF~~~~~~   93 (216)
                        .++++||||..+.+.
T Consensus       244 ~~~~il~~~~~~~~~~~  260 (323)
T cd05575         244 DFLEIKNHVFFSSINWD  260 (323)
T ss_pred             CHHHHHcCCCcCCCCHH
Confidence              699999999886553

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.51  E-value=1e-07  Score=84.20  Aligned_cols=76  Identities=24%  Similarity=0.265  Sum_probs=56.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+++|.+.+..+.+..|+......                 .+.. ...++.++.+||.+||. ||.+|++   
T Consensus       226 lyel~tG~~Pf~~~~~~~~~~~i~~~~~~~-----------------~~p~-~~~~s~~~~~li~~l~~-~p~~R~~~~~  286 (360)
T cd05627         226 MYEMLIGYPPFCSETPQETYRKVMNWKETL-----------------VFPP-EVPISEKAKDLILRFCT-DSENRIGSNG  286 (360)
T ss_pred             eeecccCCCCCCCCCHHHHHHHHHcCCCce-----------------ecCC-CCCCCHHHHHHHHHhcc-ChhhcCCCCC
Confidence            689999999999988777777665421110                 0000 01368899999999885 9999994   


Q ss_pred             HHHHHcCccccCCCCCCC
Q 042950           78 AAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~~~   95 (216)
                      +.++++||||+.+.|...
T Consensus       287 ~~ei~~hp~f~~~~~~~~  304 (360)
T cd05627         287 VEEIKSHPFFEGVDWGHI  304 (360)
T ss_pred             HHHHhcCCCCCCCCHHHH
Confidence            899999999999877554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.51  E-value=5.5e-08  Score=85.26  Aligned_cols=91  Identities=22%  Similarity=0.260  Sum_probs=67.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCC-CCCHHHHHHHHhccccCCCCCCC--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMP-SASKDAINLIESLCSWDPCKRPT--   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~kR~t--   77 (216)
                      ||||++|+.+|...+....+..|+..       .+                .|| .+++++..||.++|..||.+|+.  
T Consensus       358 MYEMmCGRLPFyn~dh~kLFeLIl~e-------d~----------------kFPr~ls~eAktLLsGLL~kdP~kRLGgG  414 (516)
T KOG0690|consen  358 MYEMMCGRLPFYNKDHEKLFELILME-------DL----------------KFPRTLSPEAKTLLSGLLKKDPKKRLGGG  414 (516)
T ss_pred             HHHHHhccCcccccchhHHHHHHHhh-------hc----------------cCCccCCHHHHHHHHHHhhcChHhhcCCC
Confidence            69999999999998887777777531       11                133 58999999999999999999995  


Q ss_pred             ---HHHHHcCccccCCCCCCCCCCCCcc-ccchhhhhhhhh
Q 042950           78 ---AAEALQHLFFKRCLYAPPHIRSVPA-VATTTRGMLKQQ  114 (216)
Q Consensus        78 ---a~eaL~HpfF~~~~~~~~~~~~~~~-~~~~~~~~~~~~  114 (216)
                         |.|+++|+||.++.|...-.....+ +.+.+...-|..
T Consensus       415 pdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSetDTr  455 (516)
T KOG0690|consen  415 PDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSETDTR  455 (516)
T ss_pred             chhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcccccchh
Confidence               8999999999999987554443332 444433333433

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.51  E-value=8.3e-08  Score=79.98  Aligned_cols=69  Identities=28%  Similarity=0.287  Sum_probs=49.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCcccc--CCCCCHHHHHHHHhccccCCCCCCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSEL--MPSASKDAINLIESLCSWDPCKRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~--~~~~s~~~~dLL~~mL~~dP~kR~ta   78 (216)
                      ++||++|+.+|...+....+.+++..  .+.                .+...  ...++.++.+||.+||..||.+|+++
T Consensus       197 ~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~----------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  258 (267)
T cd06610         197 AIELATGAAPYSKYPPMKVLMLTLQN--DPP----------------SLETGADYKKYSKSFRKMISLCLQKDPSKRPTA  258 (267)
T ss_pred             HHHHHhCCCCccccChhhhHHHHhcC--CCC----------------CcCCccccccccHHHHHHHHHHcCCChhhCcCH
Confidence            47889999998776655544444331  110                01111  23567899999999999999999999


Q ss_pred             HHHHcCccc
Q 042950           79 AEALQHLFF   87 (216)
Q Consensus        79 ~eaL~HpfF   87 (216)
                      .++++||||
T Consensus       259 ~~ll~~p~~  267 (267)
T cd06610         259 EELLKHKFF  267 (267)
T ss_pred             HHHhhCCCC
Confidence            999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.50  E-value=2.2e-07  Score=81.13  Aligned_cols=78  Identities=19%  Similarity=0.149  Sum_probs=57.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..|..........              ........++.++.+||.+||..+|.+|+++.+
T Consensus       188 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~--------------~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~  253 (333)
T cd05600         188 LYEFLCGFPPFSGSTPNETWENLKYWKETLQRP--------------VYDDPRFNLSDEAWDLITKLINDPSRRFGSLED  253 (333)
T ss_pred             HhhhhhCCCCCCCCCHHHHHHHHHhccccccCC--------------CCCccccccCHHHHHHHHHHhhChhhhcCCHHH
Confidence            689999999999988777766665421110000              000001246899999999999999999999999


Q ss_pred             HHcCccccCCCC
Q 042950           81 ALQHLFFKRCLY   92 (216)
Q Consensus        81 aL~HpfF~~~~~   92 (216)
                      +++||||....+
T Consensus       254 ll~h~~~~~~~~  265 (333)
T cd05600         254 IKNHPFFKEVDW  265 (333)
T ss_pred             HHhCcccCCCCH
Confidence            999999998544

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.50  E-value=1.2e-07  Score=84.25  Aligned_cols=75  Identities=28%  Similarity=0.344  Sum_probs=55.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC---C
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP---T   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~---t   77 (216)
                      ||||++|++||.+.+..+.+..|........                 +. ....+++++.+||.+|+. ||.+|+   +
T Consensus       234 lyell~G~~Pf~~~~~~~~~~~i~~~~~~~~-----------------~~-~~~~~s~~~~~li~~l~~-~p~~R~~~~t  294 (376)
T cd05598         234 LYEMLVGQPPFLADTPAETQLKVINWETTLH-----------------IP-SQAKLSREASDLILRLCC-GAEDRLGKNG  294 (376)
T ss_pred             eeehhhCCCCCCCCCHHHHHHHHhccCcccc-----------------CC-CCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence            6899999999999887776666543211100                 00 012478999999999874 999999   9


Q ss_pred             HHHHHcCccccCCCCCC
Q 042950           78 AAEALQHLFFKRCLYAP   94 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~~   94 (216)
                      +.++++||||..+.+..
T Consensus       295 ~~ell~h~~~~~~~~~~  311 (376)
T cd05598         295 ADEIKAHPFFKGIDFAS  311 (376)
T ss_pred             HHHHhCCCCcCCCCHHH
Confidence            99999999999865543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.48  E-value=1e-07  Score=88.61  Aligned_cols=90  Identities=19%  Similarity=0.142  Sum_probs=58.6

Q ss_pred             CcccccCCCCCC---CCCHHHHHHHHHHhhCCCCHHH-------HHHHHhhc-cccCCCccccCC--CCCHHHHHHHHhc
Q 042950            1 MAELLLFRPLFQ---GTDEAEQMYKICSVLGNPTMDS-------WADELRQA-MLSGVNLSELMP--SASKDAINLIESL   67 (216)
Q Consensus         1 L~ELltG~plF~---g~s~~dql~~I~~ilG~p~~~~-------~~~~~~~~-~~~~~~l~~~~~--~~s~~~~dLL~~m   67 (216)
                      ||||++|..++.   +.+...++.+++..++.+..+.       |....... ......+..++.  .++.++.+||.+|
T Consensus       358 l~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~km  437 (501)
T PHA03210        358 LLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKM  437 (501)
T ss_pred             HHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHH
Confidence            589999875443   2356678888888777544321       11110000 111122222222  2567889999999


Q ss_pred             cccCCCCCCCHHHHHcCccccCC
Q 042950           68 CSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        68 L~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+||.+|+||.|+|.||||...
T Consensus       438 L~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        438 LTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             hccCcccCcCHHHHhhChhhhcC
Confidence            99999999999999999999874

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.48  E-value=2.1e-07  Score=80.71  Aligned_cols=70  Identities=29%  Similarity=0.319  Sum_probs=56.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+.+|.+.+..+.+..|......                      +-..+++++.+||.+||..||.+|++   
T Consensus       188 l~el~tg~~p~~~~~~~~~~~~i~~~~~~----------------------~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         188 MFEMLTGSLPFQGKDRKETMTMILKAKLG----------------------MPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             eeeeccCCCCCCCCCHHHHHHHHHcCCCC----------------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            58999999999998887777776542111                      11246889999999999999999999   


Q ss_pred             --HHHHHcCccccCCCC
Q 042950           78 --AAEALQHLFFKRCLY   92 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~   92 (216)
                        +.+++.|+||....|
T Consensus       246 ~~~~~~~~~~~~~~~~~  262 (318)
T cd05582         246 DGVEEIKRHPFFSTIDW  262 (318)
T ss_pred             CCHHHHhCCCCcCCCCH
Confidence              788999999998543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.48  E-value=1.1e-07  Score=91.40  Aligned_cols=75  Identities=27%  Similarity=0.216  Sum_probs=58.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..|+..-..                   +......++..+.++|.+||.+||.+|+++.+
T Consensus       570 l~ElltG~~pf~~~~~~~~~~~il~~~~~-------------------~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e  630 (669)
T cd05610         570 LFEFLTGIPPFNDETPQQVFQNILNRDIP-------------------WPEGEEKLSVNAQNAIEILLTMDPTKRAGLKE  630 (669)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhcCCC-------------------CCcccccCCHHHHHHHHHHcccChhHCcCHHH
Confidence            58999999999998888877777542111                   11111246788999999999999999999999


Q ss_pred             HHcCccccCCCCCC
Q 042950           81 ALQHLFFKRCLYAP   94 (216)
Q Consensus        81 aL~HpfF~~~~~~~   94 (216)
                      +|+|+||..+.+..
T Consensus       631 ~l~h~~~~~~~~~~  644 (669)
T cd05610         631 LKQHPLFHGVDWEN  644 (669)
T ss_pred             HHhCHhhcCCCHHH
Confidence            99999998865543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.47  E-value=1.8e-07  Score=81.44  Aligned_cols=71  Identities=27%  Similarity=0.314  Sum_probs=54.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+.+|.+.+....+..|..  +..                 .   +-...++++.+||.+||.+||.+|+    
T Consensus       186 l~el~tG~~Pf~~~~~~~~~~~i~~--~~~-----------------~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~  243 (325)
T cd05594         186 MYEMMCGRLPFYNQDHEKLFELILM--EEI-----------------R---FPRTLSPEAKSLLSGLLKKDPKQRLGGGP  243 (325)
T ss_pred             eeeeccCCCCCCCCCHHHHHHHHhc--CCC-----------------C---CCCCCCHHHHHHHHHHhhcCHHHhCCCCC
Confidence            6899999999998776655555532  110                 0   1124688999999999999999997    


Q ss_pred             -CHHHHHcCccccCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYA   93 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~   93 (216)
                       ++.++|+|+||....+.
T Consensus       244 ~~~~~il~h~~~~~~~~~  261 (325)
T cd05594         244 DDAKEIMQHKFFAGIVWQ  261 (325)
T ss_pred             CCHHHHhcCCCcCCCCHH
Confidence             89999999999985443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.47  E-value=1.2e-07  Score=82.98  Aligned_cols=34  Identities=21%  Similarity=0.331  Sum_probs=32.7

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++++.+||.+||.+||++|+|+.++|+||||+.
T Consensus       273 ~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~  306 (331)
T cd06649         273 FTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKR  306 (331)
T ss_pred             ccHHHHHHHHHHccCCcccCCCHHHHhcChHHhh
Confidence            6789999999999999999999999999999987

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.47  E-value=1.5e-07  Score=78.62  Aligned_cols=72  Identities=26%  Similarity=0.285  Sum_probs=51.6

Q ss_pred             CcccccCCCCCCCCC--HHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC-
Q 042950            1 MAELLLFRPLFQGTD--EAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT-   77 (216)
Q Consensus         1 L~ELltG~plF~g~s--~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t-   77 (216)
                      +|||++|..+|.+.+  ..+.+..+......+.                    .-...+.++.+||.+||..||.+|++ 
T Consensus       182 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~  241 (262)
T cd05572         182 LYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE--------------------FPNYIDKAAKDLIKQLLRRNPEERLGN  241 (262)
T ss_pred             HHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC--------------------CCcccCHHHHHHHHHHccCChhhCcCC
Confidence            478999999997765  3444444432111100                    01134789999999999999999999 


Q ss_pred             ----HHHHHcCccccCCCC
Q 042950           78 ----AAEALQHLFFKRCLY   92 (216)
Q Consensus        78 ----a~eaL~HpfF~~~~~   92 (216)
                          +.|+++||||++..|
T Consensus       242 ~~~~~~~l~~~~~~~~~~~  260 (262)
T cd05572         242 LKGGIKDIKKHKWFNGFDW  260 (262)
T ss_pred             cccCHHHHhcChhhhCCCC
Confidence                999999999998655

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.46  E-value=2.1e-07  Score=78.79  Aligned_cols=67  Identities=19%  Similarity=0.149  Sum_probs=47.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|...+....+..+.... .                   ........+.++.+||.+||..||.+||++.|
T Consensus       216 l~el~~g~~p~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~e  275 (282)
T cd06636         216 AIEMAEGAPPLCDMHPMRALFLIPRNP-P-------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQ  275 (282)
T ss_pred             HHHHHhCCCCccccCHHhhhhhHhhCC-C-------------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHH
Confidence            478899998887655444443332210 0                   00011246789999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|.||||
T Consensus       276 ll~~~~~  282 (282)
T cd06636         276 LLKHPFI  282 (282)
T ss_pred             HhcCCCC
Confidence            9999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.46  E-value=1.3e-07  Score=83.40  Aligned_cols=74  Identities=27%  Similarity=0.351  Sum_probs=55.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+++|.+.+..+.+..|+......                 .+.. ...+++++.+||.+||. ||.+|++   
T Consensus       229 l~el~~G~~Pf~~~~~~~~~~~i~~~~~~~-----------------~~~~-~~~~s~~~~~li~~ll~-~p~~R~~~~~  289 (364)
T cd05599         229 MYEMLVGYPPFCSDNPQETYRKIINWKETL-----------------QFPD-EVPLSPEAKDLIKRLCC-EAERRLGNNG  289 (364)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHcCCCcc-----------------CCCC-CCCCCHHHHHHHHHHcc-CHhhcCCCCC
Confidence            589999999999988777766665421110                 0000 01368999999999997 9999998   


Q ss_pred             HHHHHcCccccCCCCC
Q 042950           78 AAEALQHLFFKRCLYA   93 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~   93 (216)
                      +.++|+||||+...|.
T Consensus       290 ~~~ll~h~~~~~~~~~  305 (364)
T cd05599         290 VNEIKSHPFFKGVDWE  305 (364)
T ss_pred             HHHHhcCCCcCCCCHH
Confidence            9999999999986654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.45  E-value=1.1e-07  Score=81.04  Aligned_cols=74  Identities=19%  Similarity=0.241  Sum_probs=51.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHH-hhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICS-VLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP---   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~-ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~---   76 (216)
                      +|||++|+.+|.+.+.......+.. ++..+.                   .+...++.++.+||.+||..||++|+   
T Consensus       187 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~  247 (280)
T cd05608         187 LYEMIAARGPFRARGEKVENKELKQRILNDSV-------------------TYPDKFSPASKSFCEALLAKDPEKRLGFR  247 (280)
T ss_pred             HHHHHhCCCCCCCCCcchhHHHHHHhhcccCC-------------------CCcccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence            5789999999986543322222211 111100                   01134788999999999999999999   


Q ss_pred             --CHHHHHcCccccCCCCC
Q 042950           77 --TAAEALQHLFFKRCLYA   93 (216)
Q Consensus        77 --ta~eaL~HpfF~~~~~~   93 (216)
                        +++++++||||++..|.
T Consensus       248 ~~~~~~~l~h~~~~~~~~~  266 (280)
T cd05608         248 DGNCDGLRTHPLFRDLNWR  266 (280)
T ss_pred             CCCHHHHhcChhhhcCCHh
Confidence              89999999999985544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=98.45  E-value=2.4e-07  Score=81.85  Aligned_cols=70  Identities=29%  Similarity=0.367  Sum_probs=53.5

Q ss_pred             CcccccCCCCCCCC-----CHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCC
Q 042950            1 MAELLLFRPLFQGT-----DEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKR   75 (216)
Q Consensus         1 L~ELltG~plF~g~-----s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR   75 (216)
                      |.||++|+-||...     +-.++|..|+.  +.|+.                +.+  ...|+++.+||..||+.||.+|
T Consensus       267 llE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~--~ppP~----------------lP~--~~fS~ef~~FV~~CL~Kdp~~R  326 (364)
T KOG0581|consen  267 LLELAIGRFPYPPPNPPYLDIFELLCAIVD--EPPPR----------------LPE--GEFSPEFRSFVSCCLRKDPSER  326 (364)
T ss_pred             HHHHhhCCCCCCCcCCCCCCHHHHHHHHhc--CCCCC----------------CCc--ccCCHHHHHHHHHHhcCCcccC
Confidence            46999999888764     44566666644  44321                110  0378999999999999999999


Q ss_pred             CCHHHHHcCccccCC
Q 042950           76 PTAAEALQHLFFKRC   90 (216)
Q Consensus        76 ~ta~eaL~HpfF~~~   90 (216)
                      +|+.|+|+|||+...
T Consensus       327 ~s~~qLl~Hpfi~~~  341 (364)
T KOG0581|consen  327 PSAKQLLQHPFIKKF  341 (364)
T ss_pred             CCHHHHhcCHHHhhc
Confidence            999999999999974

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.45  E-value=1.8e-07  Score=81.91  Aligned_cols=71  Identities=28%  Similarity=0.318  Sum_probs=54.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+.+|.+.+..+.+..|..  +..                    .+-..++.++.+||.+||..||.+|+    
T Consensus       185 l~elltG~~Pf~~~~~~~~~~~~~~--~~~--------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~  242 (328)
T cd05593         185 MYEMMCGRLPFYNQDHEKLFELILM--EDI--------------------KFPRTLSADAKSLLSGLLIKDPNKRLGGGP  242 (328)
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHhcc--CCc--------------------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence            5899999999988776655554432  111                    01124688999999999999999998    


Q ss_pred             -CHHHHHcCccccCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYA   93 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~   93 (216)
                       ++.++|+|+||....|.
T Consensus       243 ~~~~~il~h~~~~~~~~~  260 (328)
T cd05593         243 DDAKEIMRHSFFTGVNWQ  260 (328)
T ss_pred             CCHHHHhcCCCcCCCCHH
Confidence             89999999999886554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.45  E-value=1.2e-07  Score=83.70  Aligned_cols=36  Identities=33%  Similarity=0.453  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .++.++.+||.+||..||++|+|+.|+|+||||...
T Consensus       299 ~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        299 TASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence            478899999999999999999999999999999874

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.45  E-value=1.7e-07  Score=83.09  Aligned_cols=76  Identities=22%  Similarity=0.252  Sum_probs=55.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCC---CC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKR---PT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR---~t   77 (216)
                      ||||++|+++|.+.+..+.+.+|+.......                 +.. ...+++++.+||.+||. +|.+|   ++
T Consensus       226 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~-----------------~p~-~~~~s~~~~~li~~l~~-~~~~r~~r~~  286 (363)
T cd05628         226 MYEMLIGYPPFCSETPQETYKKVMNWKETLI-----------------FPP-EVPISEKAKDLILRFCC-EWEHRIGAPG  286 (363)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCcCccc-----------------CCC-cCCCCHHHHHHHHHHcC-ChhhcCCCCC
Confidence            5899999999999888777777765322110                 000 01368899999999886 56554   78


Q ss_pred             HHHHHcCccccCCCCCCC
Q 042950           78 AAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~~~   95 (216)
                      ++|+++||||..+.|...
T Consensus       287 ~~ei~~hp~f~~~~~~~~  304 (363)
T cd05628         287 VEEIKTNPFFEGVDWEHI  304 (363)
T ss_pred             HHHHhCCCCCCCCCHHHH
Confidence            999999999998776543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.45  E-value=1.6e-07  Score=81.79  Aligned_cols=73  Identities=26%  Similarity=0.309  Sum_probs=58.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+++|.+.+..+.+..|......                      +-..++.++.+||.+||..||.+|++   
T Consensus       191 l~elltg~~Pf~~~~~~~~~~~i~~~~~~----------------------~p~~~s~~~~~li~~~l~~~p~~R~~~~~  248 (323)
T cd05616         191 LYEMLAGQAPFEGEDEDELFQSIMEHNVA----------------------YPKSMSKEAVAICKGLMTKHPGKRLGCGP  248 (323)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCC----------------------CCCcCCHHHHHHHHHHcccCHHhcCCCCC
Confidence            58999999999998887777777652111                      11247899999999999999999998   


Q ss_pred             --HHHHHcCccccCCCCCCC
Q 042950           78 --AAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~~   95 (216)
                        ..++++|+||....|...
T Consensus       249 ~~~~~i~~h~~~~~~~~~~~  268 (323)
T cd05616         249 EGERDIKEHAFFRYIDWEKL  268 (323)
T ss_pred             CCHHHHhcCCCcCCCCHHHH
Confidence              489999999998766443

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.45  E-value=1.9e-07  Score=79.59  Aligned_cols=75  Identities=19%  Similarity=0.260  Sum_probs=52.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|.++|.+.+....+.++...  .++                 ........+.++.+||.+||..||++||++.+
T Consensus       205 l~el~~g~~p~~~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  265 (292)
T cd06644         205 LIEMAQIEPPHHELNPMRVLLKIAKS--EPP-----------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQ  265 (292)
T ss_pred             HHHHhcCCCCCccccHHHHHHHHhcC--CCc-----------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHH
Confidence            47888899888776654444443221  100                 00011246788999999999999999999999


Q ss_pred             HHcCccccCCCCCC
Q 042950           81 ALQHLFFKRCLYAP   94 (216)
Q Consensus        81 aL~HpfF~~~~~~~   94 (216)
                      +|+||||..+.+..
T Consensus       266 il~~~~~~~~~~~~  279 (292)
T cd06644         266 LLEHPFVSSVTSNR  279 (292)
T ss_pred             HhcCccccccccch
Confidence            99999998854443

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.45  E-value=8.7e-08  Score=83.51  Aligned_cols=40  Identities=33%  Similarity=0.388  Sum_probs=35.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCC-----CHHHHHcCccccCCCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRP-----TAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~-----ta~eaL~HpfF~~~~~~~   94 (216)
                      .++..+.+||.+||..||++|+     +++++++||||+...+..
T Consensus       233 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~  277 (332)
T cd05614         233 FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEA  277 (332)
T ss_pred             CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence            4688999999999999999999     889999999999865543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.44  E-value=2.7e-07  Score=80.37  Aligned_cols=70  Identities=29%  Similarity=0.452  Sum_probs=55.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+++|.+.+....+..|..  +..                    .+.+.+++++.+||.+||..||.+|+    
T Consensus       190 l~ell~G~~pf~~~~~~~~~~~~~~--~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  247 (323)
T cd05584         190 MYDMLTGAPPFTAENRKKTIDKILK--GKL--------------------NLPPYLTPEARDLLKKLLKRNPSSRLGAGP  247 (323)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHc--CCC--------------------CCCCCCCHHHHHHHHHHcccCHhHcCCCCC
Confidence            5899999999998887777766654  211                    11234688999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCC
Q 042950           77 -TAAEALQHLFFKRCLY   92 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~   92 (216)
                       ++.++++||||....+
T Consensus       248 ~~~~~l~~h~~~~~~~~  264 (323)
T cd05584         248 GDAAEVQSHPFFRHVNW  264 (323)
T ss_pred             CCHHHHhcCCCcCCCCH
Confidence             8999999999987433

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.44  E-value=1.3e-07  Score=80.77  Aligned_cols=75  Identities=20%  Similarity=0.222  Sum_probs=54.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      +|||++|+.+|.+.+.......+...+....                  ..+...++..+.+||.+||..||.+|+    
T Consensus       191 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~  252 (285)
T cd05605         191 IYEMIEGKSPFRQRKEKVKREEVERRVKEDQ------------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRG  252 (285)
T ss_pred             HHHHHHCCCCCCCCchhhHHHHHHHHhhhcc------------------cccCcccCHHHHHHHHHHccCCHHHhcCCCC
Confidence            5899999999988766554444433221100                  011234688999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYA   93 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~   93 (216)
                       ++.++++|+||....+.
T Consensus       253 ~~~~~l~~~~~~~~~~~~  270 (285)
T cd05605         253 EGAEEVKAHPFFRTANFK  270 (285)
T ss_pred             CCHHHHhcCcCccCCCHH
Confidence             89999999999875444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.44  E-value=3e-07  Score=82.06  Aligned_cols=74  Identities=26%  Similarity=0.226  Sum_probs=55.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCC--CCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCK--RPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k--R~ta   78 (216)
                      ||||++|+++|.+.+....+..|+.......                 +.. ...++..+.+||.+||..++.+  |+++
T Consensus       237 lyell~G~~Pf~~~~~~~~~~~i~~~~~~~~-----------------~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~  298 (370)
T cd05621         237 LFEMLVGDTPFYADSLVGTYSKIMDHKNSLN-----------------FPE-DVEISKHAKNLICAFLTDREVRLGRNGV  298 (370)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCcccC-----------------CCC-cccCCHHHHHHHHHHccCchhccCCCCH
Confidence            5899999999999888777777765322111                 000 0136889999999999866544  8899


Q ss_pred             HHHHcCccccCCCC
Q 042950           79 AEALQHLFFKRCLY   92 (216)
Q Consensus        79 ~eaL~HpfF~~~~~   92 (216)
                      .|+|+||||+...+
T Consensus       299 ~e~l~hp~~~~~~~  312 (370)
T cd05621         299 EEIKQHPFFKNDQW  312 (370)
T ss_pred             HHHhcCcccCCCCc
Confidence            99999999987544

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.44  E-value=3.3e-07  Score=76.75  Aligned_cols=68  Identities=28%  Similarity=0.374  Sum_probs=49.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+....+..+....+.                   +..+-...+.++.+||.+||..||++||++.+
T Consensus       198 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~  258 (265)
T cd06631         198 VFEMATGKPPLASMDRLAAMFYIGAHRGL-------------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQ  258 (265)
T ss_pred             HHHHHhCCCccccCChHHHHHHhhhccCC-------------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHH
Confidence            47888899888776554444433322111                   11112346789999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+||||
T Consensus       259 ~l~~~~~  265 (265)
T cd06631         259 LLRHDFL  265 (265)
T ss_pred             HhcCCCC
Confidence            9999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.43  E-value=1.6e-07  Score=81.72  Aligned_cols=36  Identities=31%  Similarity=0.471  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+++++.+||.+||++||++|+|+.++|+||||+..
T Consensus       278 ~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         278 TFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             ccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence            357889999999999999999999999999999873

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.43  E-value=9.8e-08  Score=81.56  Aligned_cols=37  Identities=35%  Similarity=0.337  Sum_probs=33.9

Q ss_pred             CCCHHHHHHHHhccccCCCCCCC-----HHHHHcCccccCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPT-----AAEALQHLFFKRCL   91 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~t-----a~eaL~HpfF~~~~   91 (216)
                      ..++++.+||.+||.+||.+|+|     +.|+++||||.+..
T Consensus       227 ~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05630         227 KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQIN  268 (285)
T ss_pred             cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccC
Confidence            46789999999999999999999     99999999998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.42  E-value=2.6e-07  Score=78.31  Aligned_cols=72  Identities=21%  Similarity=0.289  Sum_probs=51.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|...+.......+..+.....                  ..+.+.++.++.+||.+||..||++|+++.+
T Consensus       197 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  258 (286)
T cd06622         197 ILEMALGRYPYPPETYANIFAQLSAIVDGDP------------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQ  258 (286)
T ss_pred             HHHHHhCCCCCCCcchhhHHHHHHHHhhcCC------------------CCCCcccCHHHHHHHHHHcccCcccCCCHHH
Confidence            4789999999976544333333333222111                  1122347899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +++||||...
T Consensus       259 l~~~~~~~~~  268 (286)
T cd06622         259 LLEHPWLVKY  268 (286)
T ss_pred             HhcChhhhhc
Confidence            9999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.42  E-value=2.3e-07  Score=77.46  Aligned_cols=68  Identities=24%  Similarity=0.209  Sum_probs=48.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|...+....+..+...  .+..                +. .....+.++.+||.+||..||.+|||+.+
T Consensus       208 l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~----------------~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~~  268 (275)
T cd06608         208 AIELADGKPPLCDMHPMRALFKIPRN--PPPT----------------LK-SPENWSKKFNDFISECLIKNYEQRPFMEE  268 (275)
T ss_pred             HHHHHhCCCCccccchHHHHHHhhcc--CCCC----------------CC-chhhcCHHHHHHHHHHhhcChhhCcCHHH
Confidence            47889999999766555555554331  1100                00 00125678999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +++|||+
T Consensus       269 ll~~~~~  275 (275)
T cd06608         269 LLEHPFI  275 (275)
T ss_pred             HhcCCCC
Confidence            9999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.42  E-value=1.7e-07  Score=81.47  Aligned_cols=71  Identities=30%  Similarity=0.406  Sum_probs=54.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH-H
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA-A   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta-~   79 (216)
                      ||||++|+.+|.+.+..+.+..|...  .+.                    +-..++.++.+||.+||..||.+|+++ .
T Consensus       186 l~ell~G~~Pf~~~~~~~~~~~i~~~--~~~--------------------~~~~~~~~~~~ll~~~l~~~P~~R~~~~~  243 (316)
T cd05592         186 LYEMLIGQSPFHGEDEDELFDSILND--RPH--------------------FPRWISKEAKDCLSKLFERDPTKRLGVDG  243 (316)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcC--CCC--------------------CCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence            57999999999998876666665431  110                    012367899999999999999999986 5


Q ss_pred             HHHcCccccCCCCC
Q 042950           80 EALQHLFFKRCLYA   93 (216)
Q Consensus        80 eaL~HpfF~~~~~~   93 (216)
                      ++++|+||....|.
T Consensus       244 ~l~~h~~~~~~~~~  257 (316)
T cd05592         244 DIRQHPFFRGIDWE  257 (316)
T ss_pred             HHHcCcccCCCCHH
Confidence            88899999986553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.42  E-value=2.2e-07  Score=79.32  Aligned_cols=73  Identities=25%  Similarity=0.231  Sum_probs=55.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      +|||++|+.+|.+.+..+....+..  |.+.                    +....+..+.+||.+||..||.+|+    
T Consensus       188 l~~l~~g~~p~~~~~~~~~~~~~~~--~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~  245 (290)
T cd05580         188 IYEMLAGYPPFFDDNPIQIYEKILE--GKVR--------------------FPSFFSPDAKDLIRNLLQVDLTKRLGNLK  245 (290)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhc--CCcc--------------------CCccCCHHHHHHHHHHccCCHHHccCccc
Confidence            4789999999987775555555542  2211                    1123578999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~~   95 (216)
                       +++|+++||||..+.|...
T Consensus       246 ~~~~~l~~~~~~~~~~~~~~  265 (290)
T cd05580         246 NGVNDIKNHPWFAGIDWIAL  265 (290)
T ss_pred             CCHHHHHcCcccccCCHHHH
Confidence             8999999999998766543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.42  E-value=2.7e-07  Score=78.74  Aligned_cols=72  Identities=24%  Similarity=0.313  Sum_probs=52.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+....+..+... ..+.                 +. ....++..+.+||.+||.+||.+|+++.+
T Consensus       205 l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~-----------------~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  265 (285)
T cd06648         205 VIEMVDGEPPYFNEPPLQAMKRIRDN-LPPK-----------------LK-NLHKVSPRLRSFLDRMLVRDPAQRATAAE  265 (285)
T ss_pred             HHHHHhCCCCCcCCCHHHHHHHHHhc-CCCC-----------------Cc-ccccCCHHHHHHHHHHcccChhhCcCHHH
Confidence            47899999998877665555554432 1110                 00 01236788999999999999999999999


Q ss_pred             HHcCccccCCC
Q 042950           81 ALQHLFFKRCL   91 (216)
Q Consensus        81 aL~HpfF~~~~   91 (216)
                      +|+|+||..+.
T Consensus       266 il~~~~~~~~~  276 (285)
T cd06648         266 LLNHPFLAKAG  276 (285)
T ss_pred             HccCcccccCC
Confidence            99999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.41  E-value=3.4e-07  Score=76.06  Aligned_cols=66  Identities=23%  Similarity=0.369  Sum_probs=50.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+...+...+..  |...                   ..-...+.++.+||.+||..||.+|+++.+
T Consensus       192 l~~l~~g~~~~~~~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  250 (257)
T cd08223         192 VYEMATLKHAFNAKDMNSLVYRIIE--GKLP-------------------PMPKDYSPELGELIATMLSKRPEKRPSVKS  250 (257)
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHh--cCCC-------------------CCccccCHHHHHHHHHHhccCcccCCCHHH
Confidence            4789999999987776555555543  2110                   011246789999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +++||||
T Consensus       251 ~l~~~~~  257 (257)
T cd08223         251 ILRQPYI  257 (257)
T ss_pred             HhcCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.41  E-value=3.2e-07  Score=77.78  Aligned_cols=70  Identities=16%  Similarity=0.125  Sum_probs=52.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+++|.+.+..+.+..+........                   ..-..++.++.+||.+||..||.+|+++.+
T Consensus       198 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  258 (282)
T cd06643         198 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-------------------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQ  258 (282)
T ss_pred             HHHHccCCCCccccCHHHHHHHHhhcCCCCC-------------------CCccccCHHHHHHHHHHccCChhhCcCHHH
Confidence            4789999999987776666666544221100                   001135788999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +++||||..
T Consensus       259 il~~~~~~~  267 (282)
T cd06643         259 LLQHPFVTV  267 (282)
T ss_pred             HhcCCCEec
Confidence            999999987

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.41  E-value=2.2e-07  Score=80.97  Aligned_cols=34  Identities=44%  Similarity=0.571  Sum_probs=32.1

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .+.++.+||.+||.+||++|+|+.|+|+|+||..
T Consensus       280 ~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~  313 (328)
T cd08226         280 FSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ  313 (328)
T ss_pred             hhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence            5678999999999999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.41  E-value=2.2e-07  Score=79.89  Aligned_cols=71  Identities=24%  Similarity=0.299  Sum_probs=53.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+..+.+..+... +.+..                  .....+++.+.+||.+||..||.+|+++.+
T Consensus       205 l~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~  265 (296)
T cd06655         205 AIEMVEGEPPYLNENPLRALYLIATN-GTPEL------------------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKE  265 (296)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhc-CCccc------------------CCcccCCHHHHHHHHHHhhcChhhCCCHHH
Confidence            47899999999888776666554331 11110                  011246788999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +++|+||..+
T Consensus       266 il~~~~~~~~  275 (296)
T cd06655         266 LLQHPFLKLA  275 (296)
T ss_pred             HhhChHhhhc
Confidence            9999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.41  E-value=3.2e-07  Score=79.94  Aligned_cols=71  Identities=20%  Similarity=0.247  Sum_probs=53.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+.+|.+.+..+.+..|..  |...                 +.  -..+++++.+||.+||..||.+|+    
T Consensus       187 l~elltG~~Pf~~~~~~~~~~~i~~--~~~~-----------------~~--~~~~~~~~~~li~~~L~~~P~~R~~~~~  245 (330)
T cd05586         187 VFEMCCGWSPFYAEDTQQMYRNIAF--GKVR-----------------FP--KNVLSDEGRQFVKGLLNRNPQHRLGAHR  245 (330)
T ss_pred             EEEeccCCCCCCCCCHHHHHHHHHc--CCCC-----------------CC--CccCCHHHHHHHHHHcCCCHHHCCCCCC
Confidence            5899999999998876665555532  2110                 00  013688999999999999999998    


Q ss_pred             CHHHHHcCccccCCCC
Q 042950           77 TAAEALQHLFFKRCLY   92 (216)
Q Consensus        77 ta~eaL~HpfF~~~~~   92 (216)
                      ++.++++||||....+
T Consensus       246 ~~~~ll~h~~~~~~~~  261 (330)
T cd05586         246 DAVELKEHPFFADIDW  261 (330)
T ss_pred             CHHHHhcCccccCCCH
Confidence            6999999999987544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.41  E-value=2.7e-07  Score=77.25  Aligned_cols=66  Identities=32%  Similarity=0.465  Sum_probs=48.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+....+..+.....                     ..+....+.++.+||.+||..||.+||++.+
T Consensus       202 l~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  260 (267)
T cd06628         202 VVEMLTGKHPFPDCTQLQAIFKIGENAS---------------------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAE  260 (267)
T ss_pred             HHHHhhCCCCCCCccHHHHHHHHhccCC---------------------CcCCcccCHHHHHHHHHHccCCchhCcCHHH
Confidence            4788999999987655444444332110                     0112246789999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +++|+||
T Consensus       261 il~~~~~  267 (267)
T cd06628         261 LLKHPFL  267 (267)
T ss_pred             HhhCCCC
Confidence            9999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.40  E-value=4e-07  Score=75.93  Aligned_cols=67  Identities=28%  Similarity=0.432  Sum_probs=48.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|...+....+..+......                    ..+...++.++.+||.+||..||.+|||+.+
T Consensus       197 l~el~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  256 (263)
T cd06625         197 VVEMLTEKPPWAEFEAMAAIFKIATQPTN--------------------PQLPSHVSPDARNFLRRTFVENAKKRPSAEE  256 (263)
T ss_pred             HHHHHhCCCCccccchHHHHHHHhccCCC--------------------CCCCccCCHHHHHHHHHHhhcCcccCCCHHH
Confidence            47888999888765544444433221111                    1112347889999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+|+||
T Consensus       257 ll~~~~~  263 (263)
T cd06625         257 LLRHFFV  263 (263)
T ss_pred             HhhCCCC
Confidence            9999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.40  E-value=2.7e-07  Score=82.10  Aligned_cols=74  Identities=26%  Similarity=0.249  Sum_probs=54.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC---C
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP---T   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~---t   77 (216)
                      ||||++|+++|.+.+..+.+..|+......                 .+.. ...++.++.+||.+||. +|.+|+   +
T Consensus       238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------~~p~-~~~~s~~~~dli~~lL~-~~~~r~~r~~  298 (377)
T cd05629         238 MFECLIGWPPFCSENSHETYRKIINWRETL-----------------YFPD-DIHLSVEAEDLIRRLIT-NAENRLGRGG  298 (377)
T ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHccCCcc-----------------CCCC-CCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence            689999999999988877777776421110                 0000 11368899999999998 777765   9


Q ss_pred             HHHHHcCccccCCCCC
Q 042950           78 AAEALQHLFFKRCLYA   93 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~   93 (216)
                      +.++|+||||....+.
T Consensus       299 ~~~~l~hp~~~~~~~~  314 (377)
T cd05629         299 AHEIKSHPFFRGVDWD  314 (377)
T ss_pred             HHHHhcCCCcCCCCHH
Confidence            9999999999985543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.40  E-value=2.2e-07  Score=77.07  Aligned_cols=68  Identities=24%  Similarity=0.292  Sum_probs=46.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+++|...+....+..+..... +                 .+. .....+.++.+||.+||..||.+|+|+.|
T Consensus       189 l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~-----------------~~~-~~~~~~~~~~~~i~~~l~~~P~~Rps~~~  249 (256)
T cd06612         189 AIEMAEGKPPYSDIHPMRAIFMIPNKPP-P-----------------TLS-DPEKWSPEFNDFVKKCLVKDPEERPSAIQ  249 (256)
T ss_pred             HHHHHhCCCCCCCcchhhhhhhhccCCC-C-----------------CCC-chhhcCHHHHHHHHHHHhcChhhCcCHHH
Confidence            4688888888876655443332211100 0                 000 11235788999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+||||
T Consensus       250 il~~~~~  256 (256)
T cd06612         250 LLQHPFI  256 (256)
T ss_pred             HhcCCCC
Confidence            9999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.39  E-value=2.8e-07  Score=76.48  Aligned_cols=72  Identities=36%  Similarity=0.480  Sum_probs=52.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      +|||++|+.+|...+..+.+..+..  +...   |              .. ....+.++.+||.+||..||.+|||+  
T Consensus       191 ~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~---~--------------~~-~~~~~~~~~~~i~~~l~~~p~~Rpt~~~  250 (265)
T cd05579         191 LYEFLVGIPPFHGETPEEIFQNILN--GKIE---W--------------PE-DVEVSDEAIDLISKLLVPDPEKRLGAKS  250 (265)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhc--CCcC---C--------------Cc-cccCCHHHHHHHHHHhcCCHhhcCCCcc
Confidence            4788999999987766555555433  2110   0              00 01247899999999999999999999  


Q ss_pred             -HHHHcCccccCCCC
Q 042950           79 -AEALQHLFFKRCLY   92 (216)
Q Consensus        79 -~eaL~HpfF~~~~~   92 (216)
                       .++|+||||+++.|
T Consensus       251 ~~~~l~~~~~~~~~~  265 (265)
T cd05579         251 IEEIKNHPFFKGIDW  265 (265)
T ss_pred             HHHHhcCccccCCCC
Confidence             99999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.38  E-value=3e-07  Score=78.22  Aligned_cols=69  Identities=22%  Similarity=0.195  Sum_probs=49.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|...+....+..+..  +.+.                .+. .......++.+||.+||..||++||++.+
T Consensus       223 ~~el~~g~~p~~~~~~~~~~~~~~~--~~~~----------------~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~  283 (291)
T cd06639         223 AIELGDGDPPLFDMHPVKTLFKIPR--NPPP----------------TLL-HPEKWCRSFNHFISQCLIKDFEARPSVTH  283 (291)
T ss_pred             HHHHhhCCCCCCCCcHHHHHHHHhc--CCCC----------------CCC-cccccCHHHHHHHHHHhhcChhhCcCHHH
Confidence            4788999998877665555544432  1110                000 01235678999999999999999999999


Q ss_pred             HHcCcccc
Q 042950           81 ALQHLFFK   88 (216)
Q Consensus        81 aL~HpfF~   88 (216)
                      +|+||||+
T Consensus       284 il~~~~~~  291 (291)
T cd06639         284 LLEHPFIK  291 (291)
T ss_pred             HhcCcccC
Confidence            99999994

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.38  E-value=2.9e-07  Score=80.26  Aligned_cols=71  Identities=25%  Similarity=0.277  Sum_probs=54.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+.+|.+.+....+..+...  ..                    .+-..+++++.+||.+||..||.+|+    
T Consensus       185 l~ell~g~~Pf~~~~~~~~~~~~~~~--~~--------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~  242 (323)
T cd05595         185 MYEMMCGRLPFYNQDHERLFELILME--EI--------------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGP  242 (323)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhcC--CC--------------------CCCCCCCHHHHHHHHHHccCCHHHhCCCCC
Confidence            57999999999887766666555431  10                    01124689999999999999999998    


Q ss_pred             -CHHHHHcCccccCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYA   93 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~   93 (216)
                       ++.++|+|+||....|.
T Consensus       243 ~~~~~~l~h~~~~~~~~~  260 (323)
T cd05595         243 SDAKEVMEHRFFLSINWQ  260 (323)
T ss_pred             CCHHHHHcCCCcCCCCHH
Confidence             89999999999985543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.38  E-value=2.2e-07  Score=78.90  Aligned_cols=38  Identities=16%  Similarity=0.304  Sum_probs=34.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCH----HHHHcCccccCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTA----AEALQHLFFKRCLY   92 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta----~eaL~HpfF~~~~~   92 (216)
                      .++.++.+||.+||..||.+|+++    .+++.|+||+.+.+
T Consensus       221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~  262 (277)
T cd05607         221 NFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF  262 (277)
T ss_pred             cCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence            478899999999999999999999    77889999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.37  E-value=4.8e-07  Score=75.06  Aligned_cols=66  Identities=29%  Similarity=0.532  Sum_probs=48.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+..+.+..+..  +                   .+....+..+.++.++|.+||..||++|||+.+
T Consensus       192 l~~l~~g~~p~~~~~~~~~~~~~~~--~-------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~  250 (257)
T cd08225         192 LYELCTLKHPFEGNNLHQLVLKICQ--G-------------------YFAPISPNFSRDLRSLISQLFKVSPRDRPSITS  250 (257)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHhc--c-------------------cCCCCCCCCCHHHHHHHHHHhccChhhCcCHHH
Confidence            4688888888876655444443322  1                   011223456789999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +++||||
T Consensus       251 ll~~~~~  257 (257)
T cd08225         251 ILKRPFL  257 (257)
T ss_pred             HhhCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.37  E-value=3.5e-07  Score=78.46  Aligned_cols=70  Identities=23%  Similarity=0.253  Sum_probs=52.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+....+..+...+....                  . .....+..+.+||.+||..||.+|+|+.+
T Consensus       208 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~  268 (292)
T cd06658         208 VIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV------------------K-DSHKVSSVLRGFLDLMLVREPSQRATAQE  268 (292)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc------------------c-cccccCHHHHHHHHHHccCChhHCcCHHH
Confidence            5799999999988776665555443221100                  0 01236788999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+|+||..
T Consensus       269 il~~~~~~~  277 (292)
T cd06658         269 LLQHPFLKL  277 (292)
T ss_pred             HhhChhhhc
Confidence            999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=98.36  E-value=1.1e-07  Score=88.26  Aligned_cols=68  Identities=26%  Similarity=0.333  Sum_probs=53.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+|+|...+-......|..   .|  ..|                 ...++.++++||+++|..||.+|+|..+
T Consensus       190 lYE~~~G~PPF~a~si~~Lv~~I~~---d~--v~~-----------------p~~~S~~f~nfl~gLL~kdP~~RltW~~  247 (808)
T KOG0597|consen  190 LYELYVGQPPFYARSITQLVKSILK---DP--VKP-----------------PSTASSSFVNFLQGLLIKDPAQRLTWTD  247 (808)
T ss_pred             HHHHhcCCCCchHHHHHHHHHHHhc---CC--CCC-----------------cccccHHHHHHHHHHhhcChhhcccHHH
Confidence            5999999999998765555555543   11  112                 1268999999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|.|||++..
T Consensus       248 Ll~HpF~k~~  257 (808)
T KOG0597|consen  248 LLGHPFWKGK  257 (808)
T ss_pred             HhcChHHhhh
Confidence            9999999863

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.36  E-value=4.7e-07  Score=78.82  Aligned_cols=71  Identities=31%  Similarity=0.308  Sum_probs=55.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      ||||++|+++|.+.+..+.+..++..  ..                    .+.+..+.++.+||.+||..||.+|+++  
T Consensus       186 l~el~~G~~pf~~~~~~~~~~~~~~~--~~--------------------~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         186 LYEMLYGLPPFYCRDVAEMYDNILHK--PL--------------------VLRPGASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             ehhhhcCCCCCCCCCHHHHHHHHHcC--Cc--------------------cCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence            68999999999988776666655431  10                    1123578899999999999999999986  


Q ss_pred             --HHHHcCccccCCCCC
Q 042950           79 --AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 --~eaL~HpfF~~~~~~   93 (216)
                        .+++.||||....|.
T Consensus       244 ~~~~i~~h~~f~~~~~~  260 (325)
T cd05604         244 DFLEIQEHPFFESLSWT  260 (325)
T ss_pred             CHHHHhcCCCcCCCCHH
Confidence              599999999986553

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.36  E-value=1.6e-07  Score=77.90  Aligned_cols=72  Identities=31%  Similarity=0.410  Sum_probs=52.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|..+|......+....+.+.+.......+.               .......++.+||.+||..||.+||++.+
T Consensus       189 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~  253 (260)
T PF00069_consen  189 LYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ---------------QSREKSEELRDLIKKMLSKDPEQRPSAEE  253 (260)
T ss_dssp             HHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT---------------SHTTSHHHHHHHHHHHSSSSGGGSTTHHH
T ss_pred             cccccccccccccccchhhhhhhhhccccccccccc---------------ccchhHHHHHHHHHHHccCChhHCcCHHH
Confidence            478999999998876666666666555432211110               00012378999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +++||||
T Consensus       254 l~~~~~~  260 (260)
T PF00069_consen  254 LLKHPWF  260 (260)
T ss_dssp             HHTSGGG
T ss_pred             HhcCCCC
Confidence            9999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.35  E-value=4.3e-07  Score=76.20  Aligned_cols=33  Identities=30%  Similarity=0.385  Sum_probs=31.1

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      ..+.++.+||.+||..||.+|||+.+++.||||
T Consensus       240 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         240 KWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            467899999999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.35  E-value=3.6e-07  Score=77.23  Aligned_cols=71  Identities=28%  Similarity=0.356  Sum_probs=51.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+....+..+..  +.++.                + ..-...+.++.+||.+||..||.+|+++.+
T Consensus       198 l~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~----------------~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  258 (280)
T cd06611         198 LIELAQMEPPHHELNPMRVLLKILK--SEPPT----------------L-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAE  258 (280)
T ss_pred             HHHHHhCCCCcccCCHHHHHHHHhc--CCCCC----------------c-CCcccCCHHHHHHHHHHhccChhhCcCHHH
Confidence            4789999999987765555544432  11100                0 001235788999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+|+||...
T Consensus       259 il~~~~~~~~  268 (280)
T cd06611         259 LLKHPFVSDQ  268 (280)
T ss_pred             HhcChhhccc
Confidence            9999999873

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.35  E-value=2.9e-07  Score=77.87  Aligned_cols=36  Identities=28%  Similarity=0.399  Sum_probs=32.5

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCC-HHHHHcCccccC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPT-AAEALQHLFFKR   89 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~t-a~eaL~HpfF~~   89 (216)
                      ...++.+.+||.+||..||.+|++ .+++|+||||..
T Consensus       231 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        231 KNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             cccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence            357899999999999999999996 599999999963

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.35  E-value=3.8e-07  Score=84.20  Aligned_cols=35  Identities=29%  Similarity=0.413  Sum_probs=32.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++.++.+||.+||++||.+|+|+.|+|+||||++
T Consensus       426 ~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        426 KLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             cccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            46788999999999999999999999999999975

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.34  E-value=4.5e-07  Score=77.84  Aligned_cols=71  Identities=24%  Similarity=0.304  Sum_probs=52.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+..+.+..+.. .+.+..                  .....++..+.+||.+||..||.+|||+.+
T Consensus       206 l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e  266 (296)
T cd06654         206 AIEMIEGEPPYLNENPLRALYLIAT-NGTPEL------------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKE  266 (296)
T ss_pred             HHHHHhCCCCCCCCCHHHhHHHHhc-CCCCCC------------------CCccccCHHHHHHHHHHCcCCcccCcCHHH
Confidence            5799999999988776555544432 121110                  011246788999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +++|+||..+
T Consensus       267 il~~~~~~~~  276 (296)
T cd06654         267 LLQHQFLKIA  276 (296)
T ss_pred             HhhChhhhcc
Confidence            9999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.34  E-value=5.1e-07  Score=76.09  Aligned_cols=68  Identities=26%  Similarity=0.303  Sum_probs=50.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCC-CCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPS-ASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~-~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++|+++|.+.+....+..|..... +                    .+... ++.++.+||.+||..||++|+|++
T Consensus       188 l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~  246 (274)
T cd06609         188 AIELAKGEPPLSDLHPMRVLFLIPKNNP-P--------------------SLEGNKFSKPFKDFVSLCLNKDPKERPSAK  246 (274)
T ss_pred             HHHHHhCCCCcccCchHHHHHHhhhcCC-C--------------------CCcccccCHHHHHHHHHHhhCChhhCcCHH
Confidence            4789999999977665444443332111 0                    00112 678899999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      ++++|+||..
T Consensus       247 ~il~~~~~~~  256 (274)
T cd06609         247 ELLKHKFIKK  256 (274)
T ss_pred             HHhhChhhcC
Confidence            9999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.33  E-value=4.5e-07  Score=78.00  Aligned_cols=36  Identities=36%  Similarity=0.591  Sum_probs=32.9

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~   91 (216)
                      .+.++.+||.+||.+||++|+|+.++|+||||+.+.
T Consensus       267 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         267 FSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             HHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence            467889999999999999999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.33  E-value=4.7e-07  Score=81.40  Aligned_cols=68  Identities=29%  Similarity=0.333  Sum_probs=54.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCC-CHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSA-SKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~-s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||.|++|+.||...+....+.+|.+  |...                 +..   .+ ++++.+||.+||..||.+|+|+.
T Consensus       213 Ly~ml~G~~PF~d~~~~~l~~ki~~--~~~~-----------------~p~---~~~S~~~~~Li~~mL~~~P~~R~t~~  270 (370)
T KOG0583|consen  213 LYVLLCGRLPFDDSNVPNLYRKIRK--GEFK-----------------IPS---YLLSPEARSLIEKMLVPDPSTRITLL  270 (370)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHhc--CCcc-----------------CCC---CcCCHHHHHHHHHHcCCCcccCCCHH
Confidence            5789999999988777777777654  3211                 111   23 99999999999999999999999


Q ss_pred             HHHcCccccCC
Q 042950           80 EALQHLFFKRC   90 (216)
Q Consensus        80 eaL~HpfF~~~   90 (216)
                      +++.||||+..
T Consensus       271 ~i~~h~w~~~~  281 (370)
T KOG0583|consen  271 EILEHPWFQKE  281 (370)
T ss_pred             HHhhChhhccC
Confidence            99999999973

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.32  E-value=8.2e-07  Score=77.63  Aligned_cols=76  Identities=22%  Similarity=0.218  Sum_probs=55.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCC--CCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCK--RPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k--R~ta   78 (216)
                      ||||++|+.+|.+.+..+.+..|......                 ..+......+++++.+||.+||..++.+  |+++
T Consensus       198 l~ell~g~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~  260 (332)
T cd05623         198 MYEMLYGETPFYAESLVETYGKIMNHKER-----------------FQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGI  260 (332)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHhCCCcc-----------------ccCCCccccCCHHHHHHHHHHccChhhhcCCCCH
Confidence            58999999999988877777766542110                 0111222357899999999999876655  6899


Q ss_pred             HHHHcCccccCCCCC
Q 042950           79 AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 ~eaL~HpfF~~~~~~   93 (216)
                      .++++||||..+.|.
T Consensus       261 ~~~~~h~~f~~~~~~  275 (332)
T cd05623         261 EDFKQHPFFTGIDWD  275 (332)
T ss_pred             HHHhCCCCcCCCCHH
Confidence            999999999986554

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.32  E-value=5e-07  Score=75.88  Aligned_cols=67  Identities=25%  Similarity=0.403  Sum_probs=45.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|...+....+..+.   ..+...                 .+-..+++.+.+|| +||..||++||++.|
T Consensus       199 ~~el~~g~~pf~~~~~~~~~~~~~---~~~~~~-----------------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~e  257 (266)
T cd06651         199 VVEMLTEKPPWAEYEAMAAIFKIA---TQPTNP-----------------QLPSHISEHARDFL-GCIFVEARHRPSAEE  257 (266)
T ss_pred             HHHHHHCCCCccccchHHHHHHHh---cCCCCC-----------------CCchhcCHHHHHHH-HHhcCChhhCcCHHH
Confidence            478999999997654433333322   211100                 01123578889999 566689999999999


Q ss_pred             HHcCcccc
Q 042950           81 ALQHLFFK   88 (216)
Q Consensus        81 aL~HpfF~   88 (216)
                      +++||||+
T Consensus       258 il~hp~~~  265 (266)
T cd06651         258 LLRHPFAQ  265 (266)
T ss_pred             HhcCcccc
Confidence            99999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.32  E-value=1.2e-06  Score=75.34  Aligned_cols=73  Identities=19%  Similarity=0.255  Sum_probs=54.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+++|.+.+..+.+..+..   .+. .               ........+.++.+||.+||.+||.+|+++.+
T Consensus       207 l~el~~g~~p~~~~~~~~~~~~~~~---~~~-~---------------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~  267 (297)
T cd06659         207 VIEMVDGEPPYFSDSPVQAMKRLRD---SPP-P---------------KLKNAHKISPVLRDFLERMLTREPQERATAQE  267 (297)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhc---cCC-C---------------CccccCCCCHHHHHHHHHHhcCCcccCcCHHH
Confidence            5789999999987776666554422   110 0               01112346788999999999999999999999


Q ss_pred             HHcCccccCCCC
Q 042950           81 ALQHLFFKRCLY   92 (216)
Q Consensus        81 aL~HpfF~~~~~   92 (216)
                      +++|+||..+..
T Consensus       268 ll~~~~~~~~~~  279 (297)
T cd06659         268 LLDHPFLLQTGL  279 (297)
T ss_pred             HhhChhhccCCC
Confidence            999999998644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.32  E-value=3.8e-07  Score=76.25  Aligned_cols=34  Identities=24%  Similarity=0.334  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCcccc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFK   88 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~   88 (216)
                      ..++++.+||.+||..||++|+++.++|+||||.
T Consensus       235 ~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         235 HLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             hhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            4678999999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.32  E-value=5.2e-07  Score=75.02  Aligned_cols=66  Identities=23%  Similarity=0.356  Sum_probs=50.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|...+..+.+..++.  |...                   ......+.++.+||.+||..||.+||++.+
T Consensus       191 ~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  249 (256)
T cd08218         191 LYEMCTLKHAFEAGNMKNLVLKIIR--GSYP-------------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNS  249 (256)
T ss_pred             HHHHHcCCCCccCCCHHHHHHHHhc--CCCC-------------------CCcccCCHHHHHHHHHHhhCChhhCcCHHH
Confidence            4788999999887666666655533  2211                   111246788999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+|+||
T Consensus       250 vl~~~~~  256 (256)
T cd08218         250 ILEKNFI  256 (256)
T ss_pred             HhhCcCC
Confidence            9999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.31  E-value=5.5e-07  Score=77.48  Aligned_cols=76  Identities=26%  Similarity=0.160  Sum_probs=55.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ++||++|..+|.+.+..+.+..+...-...                   .......+.++.+||.+||..||.+|++   
T Consensus       206 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~  266 (305)
T cd05609         206 LYEFLVGCVPFFGDTPEELFGQVISDDIEW-------------------PEGDEALPADAQDLISRLLRQNPLERLGTGG  266 (305)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhcccCC-------------------CCccccCCHHHHHHHHHHhccChhhccCccC
Confidence            478999999998877665555554321100                   0001136788999999999999999997   


Q ss_pred             HHHHHcCccccCCCCCCC
Q 042950           78 AAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~~~   95 (216)
                      +.++|+||||....+...
T Consensus       267 ~~~ll~~~~~~~~~~~~~  284 (305)
T cd05609         267 AFEVKQHRFFLGLDWNGL  284 (305)
T ss_pred             HHHHHhCccccCCCHHHH
Confidence            899999999988665543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.30  E-value=7.6e-07  Score=74.33  Aligned_cols=66  Identities=26%  Similarity=0.426  Sum_probs=47.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|..+|.+.+....+..+..  +..                   ..+....+.++.+||.+||..||++||++.+
T Consensus       195 ~~~l~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  253 (260)
T cd08222         195 LYEMCCLAHAFEGQNFLSVVLRIVE--GPT-------------------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAE  253 (260)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHc--CCC-------------------CCCcchhcHHHHHHHHHHhcCChhhCcCHHH
Confidence            4678888888876655444444322  111                   0111246789999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+||||
T Consensus       254 il~~~~~  260 (260)
T cd08222         254 ILRNPFI  260 (260)
T ss_pred             HhhCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.30  E-value=2.8e-07  Score=79.14  Aligned_cols=71  Identities=23%  Similarity=0.292  Sum_probs=50.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+....+..+.. .+.+...                  .....+..+.+||.+||..||++|+++.+
T Consensus       205 l~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~  265 (297)
T cd06656         205 AIEMVEGEPPYLNENPLRALYLIAT-NGTPELQ------------------NPERLSAVFRDFLNRCLEMDVDRRGSAKE  265 (297)
T ss_pred             HHHHHhCCCCCCCCCcchheeeecc-CCCCCCC------------------CccccCHHHHHHHHHHccCChhhCcCHHH
Confidence            4788889988877665444443322 1222110                  11236788899999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||..+
T Consensus       266 il~~~~~~~~  275 (297)
T cd06656         266 LLQHPFLKLA  275 (297)
T ss_pred             HhcCchhccc
Confidence            9999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.30  E-value=8.6e-07  Score=75.22  Aligned_cols=36  Identities=33%  Similarity=0.377  Sum_probs=33.6

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .++.++.+||.+||..||++|||+.+++.||||...
T Consensus       238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         238 EFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence            478899999999999999999999999999999873

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.29  E-value=3.8e-07  Score=79.87  Aligned_cols=72  Identities=28%  Similarity=0.329  Sum_probs=56.9

Q ss_pred             CcccccCCCCCCCCCH---------------HHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHH
Q 042950            1 MAELLLFRPLFQGTDE---------------AEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIE   65 (216)
Q Consensus         1 L~ELltG~plF~g~s~---------------~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~   65 (216)
                      ||-|+.|+++|.|.-.               .+.+..|.+---..++.+|.                  .+|.++.|||+
T Consensus       281 lYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWa------------------hIS~eakdlis  342 (463)
T KOG0607|consen  281 LYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA------------------HISSEAKDLIS  342 (463)
T ss_pred             HHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhH------------------HhhHHHHHHHH
Confidence            5789999999987532               23455565533334556664                  58999999999


Q ss_pred             hccccCCCCCCCHHHHHcCccccCC
Q 042950           66 SLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        66 ~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+|+.|+..|++|.++|+|||+..+
T Consensus       343 nLlvrda~~rlsa~~vlnhPw~~~~  367 (463)
T KOG0607|consen  343 NLLVRDAKQRLSAAQVLNHPWVQRC  367 (463)
T ss_pred             HHHhccHHhhhhhhhccCCcccccc
Confidence            9999999999999999999999985

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.29  E-value=9.6e-07  Score=73.70  Aligned_cols=35  Identities=31%  Similarity=0.432  Sum_probs=32.9

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+.++.+||.+||..||.+|+|+.+++.||||+.+
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         229 FSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             cCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            67889999999999999999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.29  E-value=1.4e-06  Score=74.87  Aligned_cols=72  Identities=26%  Similarity=0.341  Sum_probs=52.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|.++|.+.+....+..+...+  +                ..+. .....+.++.+||.+||..||.+|+++.+
T Consensus       206 l~el~tg~~p~~~~~~~~~~~~~~~~~--~----------------~~~~-~~~~~~~~l~~li~~~l~~~P~~R~~~~~  266 (292)
T cd06657         206 VIEMVDGEPPYFNEPPLKAMKMIRDNL--P----------------PKLK-NLHKVSPSLKGFLDRLLVRDPAQRATAAE  266 (292)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhhC--C----------------cccC-CcccCCHHHHHHHHHHHhCCcccCcCHHH
Confidence            478889998888776665555443211  1                0011 12346788999999999999999999999


Q ss_pred             HHcCccccCCC
Q 042950           81 ALQHLFFKRCL   91 (216)
Q Consensus        81 aL~HpfF~~~~   91 (216)
                      +|+|+||....
T Consensus       267 ll~~~~~~~~~  277 (292)
T cd06657         267 LLKHPFLAKAG  277 (292)
T ss_pred             HhcChHHhccC
Confidence            99999999843

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.28  E-value=4.2e-07  Score=76.94  Aligned_cols=38  Identities=37%  Similarity=0.425  Sum_probs=34.7

Q ss_pred             CCCHHHHHHHHhccccCCCCCC-----CHHHHHcCccccCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRP-----TAAEALQHLFFKRCLY   92 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~-----ta~eaL~HpfF~~~~~   92 (216)
                      ..++++.+||.+||..||.+|+     ++.++++||||....|
T Consensus       220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~  262 (277)
T cd05577         220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW  262 (277)
T ss_pred             cCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence            4688999999999999999999     9999999999988654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.28  E-value=6e-07  Score=76.59  Aligned_cols=75  Identities=20%  Similarity=0.251  Sum_probs=54.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      +|||++|+.+|.+..+......+...+-...                  ..+....+.++.+||.+||..||++|++   
T Consensus       191 l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~  252 (285)
T cd05632         191 IYEMIEGQSPFRGRKEKVKREEVDRRVLETE------------------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQE  252 (285)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhhhccc------------------cccCccCCHHHHHHHHHHccCCHhHcCCCcc
Confidence            4789999999988766555444433221110                  0112346788999999999999999999   


Q ss_pred             --HHHHHcCccccCCCCC
Q 042950           78 --AAEALQHLFFKRCLYA   93 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~   93 (216)
                        +.+++.|+||.+..+.
T Consensus       253 ~~~~~l~~~~~~~~~~~~  270 (285)
T cd05632         253 EGAGEVKRHPFFRNMNFK  270 (285)
T ss_pred             cChHHHHcChhhhcCCHH
Confidence              8999999999985433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.27  E-value=9.1e-07  Score=73.33  Aligned_cols=66  Identities=27%  Similarity=0.376  Sum_probs=48.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+.......+..  +.                   +..+-...+.++.+||.+||..||++||++.+
T Consensus       200 l~~l~~g~~p~~~~~~~~~~~~~~~--~~-------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~  258 (265)
T cd08217         200 IYELCALSPPFTARNQLQLASKIKE--GK-------------------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEE  258 (265)
T ss_pred             HHHHHHCCCcccCcCHHHHHHHHhc--CC-------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHH
Confidence            4688888888887664444433322  11                   11112346789999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+|||+
T Consensus       259 il~~~~~  265 (265)
T cd08217         259 LLQLPLI  265 (265)
T ss_pred             HhhCCCC
Confidence            9999995

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.27  E-value=1.1e-06  Score=76.51  Aligned_cols=72  Identities=29%  Similarity=0.401  Sum_probs=56.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      +|||++|+++|.+.+....+..|+..-..                      +...++.++.+||.+||..||.+|++   
T Consensus       191 l~elltG~~pf~~~~~~~~~~~i~~~~~~----------------------~p~~~~~~~~~li~~~l~~~p~~R~~~~~  248 (323)
T cd05615         191 LYEMLAGQPPFDGEDEDELFQSIMEHNVS----------------------YPKSLSKEAVSICKGLMTKHPSKRLGCGP  248 (323)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCC----------------------CCccCCHHHHHHHHHHcccCHhhCCCCCC
Confidence            57999999999998877777766542111                      11246889999999999999999997   


Q ss_pred             --HHHHHcCccccCCCCCC
Q 042950           78 --AAEALQHLFFKRCLYAP   94 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~   94 (216)
                        ..++++|+||....|..
T Consensus       249 ~~~~~i~~h~~f~~~~~~~  267 (323)
T cd05615         249 EGERDIREHAFFRRIDWDK  267 (323)
T ss_pred             CCHHHHhcCcccCCCCHHH
Confidence              58999999999876543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.26  E-value=1.5e-06  Score=72.05  Aligned_cols=67  Identities=28%  Similarity=0.379  Sum_probs=48.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|...+..+.+..+.....                    ...+...+++++.+||.+||..||.+|+++.+
T Consensus       192 l~~l~~g~~pf~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  251 (258)
T cd06632         192 VLEMATGKPPWSQLEGVAAVFKIGRSKE--------------------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAE  251 (258)
T ss_pred             HHHHHhCCCCcccCcHHHHHHHHHhccc--------------------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHH
Confidence            4688888888876554444444332111                    11122346889999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|.|||+
T Consensus       252 ~l~~~~~  258 (258)
T cd06632         252 LLEHPFV  258 (258)
T ss_pred             HhcCCCC
Confidence            9999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.26  E-value=8.1e-07  Score=74.63  Aligned_cols=34  Identities=35%  Similarity=0.514  Sum_probs=31.7

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      ..++.++.+||.+||..||.+||++.++|+||||
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         239 MNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             ccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            3468899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.26  E-value=1.7e-06  Score=75.62  Aligned_cols=76  Identities=21%  Similarity=0.210  Sum_probs=55.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCC--CCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCK--RPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k--R~ta   78 (216)
                      ||||++|+.+|.+.+..+.+..|+.....                 ..+......++.++.+||.+||..++.+  |+++
T Consensus       198 l~el~~g~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~  260 (331)
T cd05597         198 MYEMLYGETPFYAESLVETYGKIMNHKEH-----------------FQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGL  260 (331)
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHcCCCc-----------------ccCCCccCCCCHHHHHHHHHHccCcccccCCCCH
Confidence            58999999999988777776666542111                 0111122347899999999999875554  7899


Q ss_pred             HHHHcCccccCCCCC
Q 042950           79 AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 ~eaL~HpfF~~~~~~   93 (216)
                      .++|+||||..+.|.
T Consensus       261 ~~~l~hp~~~~~~~~  275 (331)
T cd05597         261 QDFKDHPFFEGIDWD  275 (331)
T ss_pred             HHHhcCCCCCCCCHH
Confidence            999999999986554

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.26  E-value=8e-07  Score=77.89  Aligned_cols=34  Identities=18%  Similarity=0.331  Sum_probs=32.3

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .+.++.+||.+||.+||.+|+|+.|+|.|+||+.
T Consensus       271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~  304 (333)
T cd06650         271 FGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  304 (333)
T ss_pred             cCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhc
Confidence            5788999999999999999999999999999986

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.25  E-value=6.4e-07  Score=88.50  Aligned_cols=92  Identities=26%  Similarity=0.257  Sum_probs=74.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHh---hCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSV---LGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~i---lG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      +|||+.|..||+.++-++...+|+..   ++.|.                    . ..+|+++.|||.++| -+|..|+.
T Consensus       271 ~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~--------------------~-~~VSeeakdLI~~ll-~~~e~RLg  328 (1317)
T KOG0612|consen  271 MYEMLYGETPFYADSLVETYGKIMNHKESLSFPD--------------------E-TDVSEEAKDLIEALL-CDREVRLG  328 (1317)
T ss_pred             HHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCc--------------------c-cccCHHHHHHHHHHh-cChhhhcc
Confidence            59999999999999999999999864   22221                    0 138999999999988 58999998


Q ss_pred             ---HHHHHcCccccCCCCCCCCCCCC-ccccchhhhhhhhhcc
Q 042950           78 ---AAEALQHLFFKRCLYAPPHIRSV-PAVATTTRGMLKQQGA  116 (216)
Q Consensus        78 ---a~eaL~HpfF~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  116 (216)
                         ++++..||||.++.|..  +|.. +++.+.+.+..|.+++
T Consensus       329 rngiedik~HpFF~g~~W~~--iR~~~pP~vPevssd~DTsnF  369 (1317)
T KOG0612|consen  329 RNGIEDIKNHPFFEGIDWDN--IRESVPPVVPEVSSDDDTSNF  369 (1317)
T ss_pred             cccHHHHHhCccccCCChhh--hhhcCCCCCCcCCCCCccccc
Confidence               99999999999999943  4544 3377777777777777

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.24  E-value=1.2e-06  Score=73.38  Aligned_cols=65  Identities=32%  Similarity=0.428  Sum_probs=48.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      ++||++|+.+|...+....+..+....-                      .+....++.+.+||.+||..||.+||++  
T Consensus       212 l~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  269 (280)
T cd05581         212 IYQMLTGKPPFRGSNEYLTFQKILKLEY----------------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNE  269 (280)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHhcCC----------------------CCCCccCHHHHHHHHHHhcCCHhhCCCccc
Confidence            4688888888887765544444432111                      0112457899999999999999999999  


Q ss_pred             --HHHHcCccc
Q 042950           79 --AEALQHLFF   87 (216)
Q Consensus        79 --~eaL~HpfF   87 (216)
                        .++|+||||
T Consensus       270 ~~~~ll~~~~~  280 (280)
T cd05581         270 GYDELKAHPFF  280 (280)
T ss_pred             CHHHHhcCCCC
Confidence              999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.23  E-value=1.9e-06  Score=74.57  Aligned_cols=70  Identities=23%  Similarity=0.288  Sum_probs=51.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|.++|.+.+....+..+... ..+.                   ......+..+.+||.+||.+||.+|+++.+
T Consensus       210 l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~  269 (313)
T cd06633         210 CIELAERKPPLFNMNAMSALYHIAQN-DSPT-------------------LQSNEWTDSFRGFVDYCLQKIPQERPASAE  269 (313)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhc-CCCC-------------------CCccccCHHHHHHHHHHccCChhhCcCHHH
Confidence            46888888888776666666555331 1110                   001235678899999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|.||||...
T Consensus       270 ~l~~~~~~~~  279 (313)
T cd06633         270 LLRHDFVRRD  279 (313)
T ss_pred             HhcCcccCCC
Confidence            9999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.23  E-value=1e-06  Score=72.60  Aligned_cols=33  Identities=39%  Similarity=0.515  Sum_probs=31.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      ..+.++.++|.+||..||++|+|+.++|+||||
T Consensus       226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         226 QYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            467899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.23  E-value=1.2e-06  Score=72.98  Aligned_cols=32  Identities=41%  Similarity=0.582  Sum_probs=30.5

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      ++..+.+||.+||..||.+|+|+.+++.|||+
T Consensus       233 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         233 LSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            57889999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.22  E-value=1.2e-06  Score=76.22  Aligned_cols=71  Identities=30%  Similarity=0.345  Sum_probs=56.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH-
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA-   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~-   79 (216)
                      ||||++|+++|.+.+..+.+..|.....                      .+.+.++..+.+||.+||+.||.+|+++. 
T Consensus       186 l~el~~g~~pf~~~~~~~~~~~i~~~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (325)
T cd05602         186 LYEMLYGLPPFYSRNTAEMYDNILNKPL----------------------QLKPNITNSARHLLEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHhCCc----------------------CCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            5899999999998887777666654210                      01245789999999999999999999875 


Q ss_pred             ---HHHcCccccCCCCC
Q 042950           80 ---EALQHLFFKRCLYA   93 (216)
Q Consensus        80 ---eaL~HpfF~~~~~~   93 (216)
                         ++++|+||....|.
T Consensus       244 ~~~~i~~~~~~~~~~~~  260 (325)
T cd05602         244 DFMEIKNHIFFSPINWD  260 (325)
T ss_pred             CHHHHhcCcccCCCCHH
Confidence               89999999886554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.21  E-value=1.5e-06  Score=75.98  Aligned_cols=39  Identities=23%  Similarity=0.310  Sum_probs=34.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCC------HHHHHcCccccCCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPT------AAEALQHLFFKRCLYA   93 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~t------a~eaL~HpfF~~~~~~   93 (216)
                      .++.++.+||.+||..||.+|++      +.++++||||..+.|.
T Consensus       227 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~  271 (329)
T cd05588         227 SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWD  271 (329)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence            46889999999999999999997      7899999999886554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.21  E-value=1.2e-06  Score=72.67  Aligned_cols=66  Identities=24%  Similarity=0.291  Sum_probs=48.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+.......+.....                     ..+....+.++.+||.+||..||.+|||+.|
T Consensus       191 l~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  249 (256)
T cd08220         191 LYELASLKRAFEAANLPALVLKIMSGTF---------------------APISDRYSPDLRQLILSMLNLDPSKRPQLSQ  249 (256)
T ss_pred             HHHHHhCCCCcccCchHHHHHHHHhcCC---------------------CCCCCCcCHHHHHHHHHHccCChhhCCCHHH
Confidence            4678888888877665554444432111                     1111246789999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+||||
T Consensus       250 ll~~p~~  256 (256)
T cd08220         250 IMAQPIC  256 (256)
T ss_pred             HhhCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.20  E-value=1.1e-06  Score=72.23  Aligned_cols=33  Identities=42%  Similarity=0.597  Sum_probs=31.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      ..+.++.+||.+||..||.+|+++.++++||||
T Consensus       228 ~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         228 HLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             ccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            457899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.20  E-value=1.8e-06  Score=72.55  Aligned_cols=33  Identities=39%  Similarity=0.417  Sum_probs=31.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      .+++++.+||.+||..||.+|||+.+++.||||
T Consensus       236 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         236 SLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             ccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            467899999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.20  E-value=1.8e-06  Score=77.07  Aligned_cols=73  Identities=27%  Similarity=0.287  Sum_probs=54.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCC---CCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCK---RPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k---R~t   77 (216)
                      ||||++|+++|.+.+....+.+|+.......                 +.. ...++.++.+||.+||. +|.+   |++
T Consensus       237 lyell~G~~Pf~~~~~~~~~~~i~~~~~~~~-----------------~~~-~~~~s~~~~~li~~~L~-~~~~r~~r~~  297 (371)
T cd05622         237 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLT-----------------FPD-DNDISKEAKNLICAFLT-DREVRLGRNG  297 (371)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCccc-----------------CCC-cCCCCHHHHHHHHHHcC-ChhhhcCCCC
Confidence            5899999999999888777777765322111                 000 12578999999999998 5554   679


Q ss_pred             HHHHHcCccccCCCC
Q 042950           78 AAEALQHLFFKRCLY   92 (216)
Q Consensus        78 a~eaL~HpfF~~~~~   92 (216)
                      +.++++|+||....+
T Consensus       298 ~~ei~~h~~~~~~~~  312 (371)
T cd05622         298 VEEIKRHLFFKNDQW  312 (371)
T ss_pred             HHHHhcCcccCCCCh
Confidence            999999999988544

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.19  E-value=1.7e-06  Score=73.03  Aligned_cols=66  Identities=24%  Similarity=0.262  Sum_probs=56.7

Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHHH
Q 042950            2 AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEA   81 (216)
Q Consensus         2 ~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~ea   81 (216)
                      ||++.|.|+|...+..+...+|.++--..                      -..++.++.|||.+||+.+|.+|++-.|+
T Consensus       213 yeflvg~ppFes~~~~etYkrI~k~~~~~----------------------p~~is~~a~dlI~~ll~~~p~~r~~l~~v  270 (281)
T KOG0580|consen  213 YEFLVGLPPFESQSHSETYKRIRKVDLKF----------------------PSTISGGAADLISRLLVKNPIERLALTEV  270 (281)
T ss_pred             HHHHhcCCchhhhhhHHHHHHHHHccccC----------------------CcccChhHHHHHHHHhccCccccccHHHH
Confidence            79999999999988888888887753221                      13589999999999999999999999999


Q ss_pred             HcCccccC
Q 042950           82 LQHLFFKR   89 (216)
Q Consensus        82 L~HpfF~~   89 (216)
                      +.|||...
T Consensus       271 ~~hpwI~a  278 (281)
T KOG0580|consen  271 MDHPWIVA  278 (281)
T ss_pred             hhhHHHHh
Confidence            99999865

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.19  E-value=8.9e-07  Score=75.38  Aligned_cols=38  Identities=37%  Similarity=0.437  Sum_probs=34.4

Q ss_pred             CCCHHHHHHHHhccccCCCCCC-----CHHHHHcCccccCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRP-----TAAEALQHLFFKRCLY   92 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~-----ta~eaL~HpfF~~~~~   92 (216)
                      ..+.++.+||.+||..||.+|+     |+.++++||||....+
T Consensus       221 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~  263 (279)
T cd05633         221 SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDW  263 (279)
T ss_pred             ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCH
Confidence            4688999999999999999999     6999999999998543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.18  E-value=2e-06  Score=71.29  Aligned_cols=66  Identities=17%  Similarity=0.140  Sum_probs=50.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+..+.+..+......                     .+....+.++.++|.+||..||++||++.+
T Consensus       191 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~  249 (256)
T cd08529         191 LYECCTGKHPFDANNQGALILKIIRGVFP---------------------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQ  249 (256)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCC---------------------CCccccCHHHHHHHHHHccCCcccCcCHHH
Confidence            47899999999887766655555431111                     111146788999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +++|||+
T Consensus       250 ll~~~~~  256 (256)
T cd08529         250 LLRNPSL  256 (256)
T ss_pred             HhhCCCC
Confidence            9999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.18  E-value=1.2e-06  Score=74.04  Aligned_cols=68  Identities=26%  Similarity=0.267  Sum_probs=46.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|...+....+..+...  .+.                .+. .-...+.++.+||.+||..||.+|||+.|
T Consensus       219 ~~el~~g~~p~~~~~~~~~~~~~~~~--~~~----------------~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~e  279 (286)
T cd06638         219 AIELGDGDPPLADLHPMRALFKIPRN--PPP----------------TLH-QPELWSNEFNDFIRKCLTKDYEKRPTVSD  279 (286)
T ss_pred             HHHHhcCCCCCCCCchhHHHhhcccc--CCC----------------ccc-CCCCcCHHHHHHHHHHccCCcccCCCHHH
Confidence            46888888888766554444333221  000                000 00124678999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+|+||
T Consensus       280 ll~~~~~  286 (286)
T cd06638         280 LLQHVFI  286 (286)
T ss_pred             HhhcccC
Confidence            9999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.18  E-value=1.2e-06  Score=81.27  Aligned_cols=70  Identities=20%  Similarity=0.294  Sum_probs=49.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCC--CHHHHHHHHhccccCCCCCCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSA--SKDAINLIESLCSWDPCKRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~--s~~~~dLL~~mL~~dP~kR~ta   78 (216)
                      ||+|+.|++||.  +-..++.++..+.-+-.+-.                  |+..  ..+++++++.||.+||.+|+|+
T Consensus       562 LYqMvYgktPf~--~~~n~~aKl~aI~~P~~~Ie------------------fp~~~~~~~li~~mK~CL~rdPkkR~si  621 (677)
T KOG0596|consen  562 LYQMVYGKTPFG--QIINQIAKLHAITDPNHEIE------------------FPDIPENDELIDVMKCCLARDPKKRWSI  621 (677)
T ss_pred             HHHHHhcCCchH--HHHHHHHHHHhhcCCCcccc------------------ccCCCCchHHHHHHHHHHhcCcccCCCc
Confidence            689999999994  33345555554433211111                  2222  2349999999999999999999


Q ss_pred             HHHHcCccccCC
Q 042950           79 AEALQHLFFKRC   90 (216)
Q Consensus        79 ~eaL~HpfF~~~   90 (216)
                      .++|+|||..-.
T Consensus       622 ~eLLqhpFl~~~  633 (677)
T KOG0596|consen  622 PELLQHPFLQIQ  633 (677)
T ss_pred             HHHhcCcccccc
Confidence            999999999863

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.18  E-value=1.7e-06  Score=70.78  Aligned_cols=67  Identities=25%  Similarity=0.331  Sum_probs=46.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      |+||++|+.+|...+....+..+.. ...+. ..+                 -...+.++.+||.+||..||.+|+|+.+
T Consensus       187 l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~-~~~-----------------~~~~~~~~~~~i~~~l~~~p~~R~t~~~  247 (253)
T cd05122         187 AIELAEGKPPYSELPPMKALFKIAT-NGPPG-LRN-----------------PEKWSDEFKDFLKKCLQKNPEKRPTAEQ  247 (253)
T ss_pred             HHHHHhCCCCCCCCchHHHHHHHHh-cCCCC-cCc-----------------ccccCHHHHHHHHHHccCChhhCCCHHH
Confidence            4688888888876654444443332 11110 000                 0113788999999999999999999999


Q ss_pred             HHcCcc
Q 042950           81 ALQHLF   86 (216)
Q Consensus        81 aL~Hpf   86 (216)
                      +|+|||
T Consensus       248 ~l~~~~  253 (253)
T cd05122         248 LLKHPF  253 (253)
T ss_pred             HhcCCC
Confidence            999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.17  E-value=1.9e-06  Score=75.42  Aligned_cols=39  Identities=28%  Similarity=0.363  Sum_probs=34.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCC------HHHHHcCccccCCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPT------AAEALQHLFFKRCLYA   93 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~t------a~eaL~HpfF~~~~~~   93 (216)
                      ..+.++.+||.+||.+||.+|++      ..++++||||....|.
T Consensus       227 ~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~  271 (329)
T cd05618         227 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD  271 (329)
T ss_pred             CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence            47889999999999999999998      4799999999986654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.17  E-value=9.3e-07  Score=75.79  Aligned_cols=71  Identities=24%  Similarity=0.291  Sum_probs=51.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+++|.+.+..+++..+.. -+.+...                  ....++..+.+||.+||..||.+|+++.+
T Consensus       205 l~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~  265 (293)
T cd06647         205 AIEMVEGEPPYLNENPLRALYLIAT-NGTPELQ------------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKE  265 (293)
T ss_pred             HHHHHhCCCCCCCCChhhheeehhc-CCCCCCC------------------CccccCHHHHHHHHHHccCChhhCcCHHH
Confidence            4688899999987766555443321 1211100                  01235678999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      ++.|+||..+
T Consensus       266 il~h~~~~~~  275 (293)
T cd06647         266 LLQHPFLKIA  275 (293)
T ss_pred             HhcCHHHhcC
Confidence            9999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.16  E-value=1.8e-06  Score=72.87  Aligned_cols=36  Identities=25%  Similarity=0.304  Sum_probs=33.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ..+.++.+||.+||..||.+||++.++++|+||...
T Consensus       232 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         232 KFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH  267 (283)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence            367899999999999999999999999999999974

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.16  E-value=2.4e-06  Score=74.12  Aligned_cols=71  Identities=25%  Similarity=0.305  Sum_probs=53.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      ||||++|+++|.+.+....+..|+.   .+.                   .+.+..+.++.+||.+||..||.+|+++  
T Consensus       186 l~el~~g~~pf~~~~~~~~~~~i~~---~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (321)
T cd05603         186 LYEMLYGLPPFYSRDVSQMYDNILH---KPL-------------------QLPGGKTVAACDLLVGLLHKDQRRRLGAKA  243 (321)
T ss_pred             hhhhhcCCCCCCCCCHHHHHHHHhc---CCC-------------------CCCCCCCHHHHHHHHHHccCCHhhcCCCCC
Confidence            6899999999998876555555532   110                   0113467889999999999999999975  


Q ss_pred             --HHHHcCccccCCCCC
Q 042950           79 --AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 --~eaL~HpfF~~~~~~   93 (216)
                        .++++|+||....+.
T Consensus       244 ~~~~~~~~~~~~~~~~~  260 (321)
T cd05603         244 DFLEIKNHVFFSPINWD  260 (321)
T ss_pred             CHHHHhCCCCcCCCCHH
Confidence              599999999875443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.15  E-value=3.2e-06  Score=69.93  Aligned_cols=66  Identities=24%  Similarity=0.311  Sum_probs=47.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+.......+.....                     ..+....+.++.++|.+||..||++||++.+
T Consensus       191 ~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  249 (256)
T cd08530         191 LYEMATFAPPFEARSMQDLRYKVQRGKY---------------------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDK  249 (256)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhcCCC---------------------CCCchhhCHHHHHHHHHHcCCCcccCCCHHH
Confidence            4688888888877665444443322111                     1111246788999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+||+.
T Consensus       250 ~l~~p~~  256 (256)
T cd08530         250 ILASPAV  256 (256)
T ss_pred             HhcCCCC
Confidence            9999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.14  E-value=1.3e-06  Score=74.16  Aligned_cols=41  Identities=29%  Similarity=0.314  Sum_probs=36.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCC-----CHHHHHcCccccCCCCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRP-----TAAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~-----ta~eaL~HpfF~~~~~~~~   95 (216)
                      ..+.++.+||.+||..||.+|+     ++.++++||||....+...
T Consensus       221 ~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~  266 (278)
T cd05606         221 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMV  266 (278)
T ss_pred             cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHh
Confidence            3588999999999999999999     9999999999998665544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.14  E-value=1.6e-06  Score=80.02  Aligned_cols=71  Identities=23%  Similarity=0.275  Sum_probs=61.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||-|++|+++|+-.++.+.|-+|+++--+.+                      ..++.++.|||..||+.||.+|.+.++
T Consensus       209 LyMLVCGq~PFqeANDSETLTmImDCKYtvP----------------------shvS~eCrdLI~sMLvRdPkkRAslEe  266 (864)
T KOG4717|consen  209 LYMLVCGQPPFQEANDSETLTMIMDCKYTVP----------------------SHVSKECRDLIQSMLVRDPKKRASLEE  266 (864)
T ss_pred             HHHHHhCCCccccccchhhhhhhhcccccCc----------------------hhhhHHHHHHHHHHHhcCchhhccHHH
Confidence            4778999999999999999999988654421                      247899999999999999999999999


Q ss_pred             HHcCccccCCCCC
Q 042950           81 ALQHLFFKRCLYA   93 (216)
Q Consensus        81 aL~HpfF~~~~~~   93 (216)
                      +..|+|++.....
T Consensus       267 I~s~~Wlq~~D~~  279 (864)
T KOG4717|consen  267 IVSTSWLQAGDRG  279 (864)
T ss_pred             HhccccccCCCCC
Confidence            9999999986543

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.14  E-value=2.3e-06  Score=70.67  Aligned_cols=65  Identities=32%  Similarity=0.359  Sum_probs=47.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      +|||++|+.+|...+.......+..  +..                 .   +-...+.++.+||.+||..||.+|+++  
T Consensus       183 ~~~l~~g~~p~~~~~~~~~~~~~~~--~~~-----------------~---~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         183 LYEMLTGKPPFYAEDRKEIYEKILK--DPL-----------------R---FPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHhc--CCC-----------------C---CCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            4688888888877665444444433  111                 0   112347889999999999999999999  


Q ss_pred             -HHHHcCccc
Q 042950           79 -AEALQHLFF   87 (216)
Q Consensus        79 -~eaL~HpfF   87 (216)
                       .++++||||
T Consensus       241 ~~~l~~~~~f  250 (250)
T cd05123         241 AEEIKAHPFF  250 (250)
T ss_pred             HHHHHhCCCC
Confidence             999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.14  E-value=2.5e-06  Score=70.89  Aligned_cols=35  Identities=43%  Similarity=0.562  Sum_probs=32.9

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+..+.+||.+||..+|++|+++.++|+||||+.+
T Consensus       228 ~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         228 FSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence            67889999999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.12  E-value=2.7e-06  Score=71.92  Aligned_cols=68  Identities=29%  Similarity=0.338  Sum_probs=49.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|.++|.+.+....+..+..  +.+                   ..+...++.++.+||.+||..||++||++.+
T Consensus       191 l~el~tg~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  249 (277)
T cd06640         191 AIELAKGEPPNSDMHPMRVLFLIPK--NNP-------------------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKE  249 (277)
T ss_pred             HHHHHHCCCCCCCcChHhHhhhhhc--CCC-------------------CCCchhhhHHHHHHHHHHcccCcccCcCHHH
Confidence            4788888888877665444433211  111                   1112235678899999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +++|+||..
T Consensus       250 il~~~~~~~  258 (277)
T cd06640         250 LLKHKFIVK  258 (277)
T ss_pred             HHhChHhhh
Confidence            999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.11  E-value=3.8e-06  Score=72.53  Aligned_cols=34  Identities=24%  Similarity=0.358  Sum_probs=32.4

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .+.++.+||.+||..||++|||+.++|+||||..
T Consensus       259 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  292 (308)
T cd06615         259 FSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR  292 (308)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence            6788999999999999999999999999999986

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.11  E-value=3.7e-06  Score=72.39  Aligned_cols=69  Identities=29%  Similarity=0.358  Sum_probs=50.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+++|.+.+....+..+... ..+.                 +.  ....+.++.+||.+||..||.+||++.+
T Consensus       204 l~el~tg~~p~~~~~~~~~~~~~~~~-~~~~-----------------~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~  263 (307)
T cd06607         204 CIELAERKPPLFNMNAMSALYHIAQN-DSPT-----------------LS--SNDWSDYFRNFVDSCLQKIPQDRPSSEE  263 (307)
T ss_pred             HHHHHcCCCCCCCccHHHHHHHHhcC-CCCC-----------------CC--chhhCHHHHHHHHHHhcCChhhCcCHHH
Confidence            47889999888877665554444321 1110                 00  1124678999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      ++.|+||..
T Consensus       264 il~~~~~~~  272 (307)
T cd06607         264 LLKHRFVLR  272 (307)
T ss_pred             HhcChhhcc
Confidence            999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.11  E-value=3.2e-06  Score=78.64  Aligned_cols=68  Identities=31%  Similarity=0.438  Sum_probs=54.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..++.  |..                   ..+.+.+++++.+||.+||..||.+||++.+
T Consensus       235 lyeLltG~~Pf~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~e  293 (496)
T PTZ00283        235 LYELLTLKRPFDGENMEEVMHKTLA--GRY-------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSK  293 (496)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHhc--CCC-------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHH
Confidence            5899999999998877666666543  211                   0112357899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+|||+..
T Consensus       294 ll~~p~~~~  302 (496)
T PTZ00283        294 LLNMPICKL  302 (496)
T ss_pred             HHhCHHHHH
Confidence            999999876

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.11  E-value=1.6e-06  Score=73.49  Aligned_cols=36  Identities=19%  Similarity=0.356  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ..++++.+||.+||..||.+|+++.++++|+||...
T Consensus       224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         224 QFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             cCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence            367899999999999999999999999999999873

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.10  E-value=5.5e-06  Score=72.45  Aligned_cols=76  Identities=20%  Similarity=0.217  Sum_probs=55.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCC--CCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCK--RPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k--R~ta   78 (216)
                      ||||++|+.+|.+.+..+.+..|......                 ..+...+..++.++.+||.+||..++.+  |.++
T Consensus       198 l~ell~g~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~  260 (331)
T cd05624         198 MYEMLYGETPFYAESLVETYGKIMNHEER-----------------FQFPSHITDVSEEAKDLIQRLICSRERRLGQNGI  260 (331)
T ss_pred             hhhhhhCCCCccCCCHHHHHHHHHcCCCc-----------------ccCCCccccCCHHHHHHHHHHccCchhhcCCCCH
Confidence            68999999999988877766666542111                 1122223457899999999999976655  4689


Q ss_pred             HHHHcCccccCCCCC
Q 042950           79 AEALQHLFFKRCLYA   93 (216)
Q Consensus        79 ~eaL~HpfF~~~~~~   93 (216)
                      +++++|+||....|.
T Consensus       261 ~~~~~h~~f~~~~~~  275 (331)
T cd05624         261 EDFKKHAFFEGIDWE  275 (331)
T ss_pred             HHHhcCCCcCCCCHH
Confidence            999999999986554

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.10  E-value=4.1e-06  Score=69.09  Aligned_cols=33  Identities=27%  Similarity=0.402  Sum_probs=31.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      .++..+.+||.+||..||++|+|+.++|.|+||
T Consensus       222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         222 GISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             CCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            467899999999999999999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.10  E-value=3.9e-06  Score=75.27  Aligned_cols=86  Identities=24%  Similarity=0.407  Sum_probs=56.9

Q ss_pred             cccC-CCCCCCCCHHHHHHHHHHhhCCCCHHH----------HHHHHhhc-------ccc----------CC---Ccccc
Q 042950            4 LLLF-RPLFQGTDEAEQMYKICSVLGNPTMDS----------WADELRQA-------MLS----------GV---NLSEL   52 (216)
Q Consensus         4 LltG-~plF~g~s~~dql~~I~~ilG~p~~~~----------~~~~~~~~-------~~~----------~~---~l~~~   52 (216)
                      ++++ .|.|...++.+.|.+|+.++|.-....          |.. .+.+       .+.          ..   .....
T Consensus       271 lls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~k-sn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~  349 (418)
T KOG1167|consen  271 LLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQK-SNIPTIPELRVNFETLHIESIYKSRQPNTEREIG  349 (418)
T ss_pred             hhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecc-ccccccHHHHhchhccChhhcccccccceeeccc
Confidence            3444 477788999999999999999633321          110 0011       000          00   01111


Q ss_pred             CCCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           53 MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        53 ~~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ....+..++|||.+||..||.+|+||++||.||||++.
T Consensus       350 ~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  350 SDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             cccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence            12245588999999999999999999999999999963

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.09  E-value=2.9e-06  Score=70.52  Aligned_cols=69  Identities=28%  Similarity=0.270  Sum_probs=47.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+++|.+.+....+..+...--.+..                +. .-...+.++.+||.+||..||..|+|+.+
T Consensus       194 l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  256 (262)
T cd06613         194 AIELAELQPPMFDLHPMRALFLISKSNFPPPK----------------LK-DKEKWSPVFHDFIKKCLTKDPKKRPTATK  256 (262)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc----------------cc-chhhhhHHHHHHHHHHcCCChhhCCCHHH
Confidence            47899999999877665555444321001000                00 01134678899999999999999999999


Q ss_pred             HHcCcc
Q 042950           81 ALQHLF   86 (216)
Q Consensus        81 aL~Hpf   86 (216)
                      ++.|+|
T Consensus       257 il~~~~  262 (262)
T cd06613         257 LLQHPF  262 (262)
T ss_pred             HhcCCC
Confidence            999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.09  E-value=2.8e-06  Score=72.66  Aligned_cols=35  Identities=34%  Similarity=0.430  Sum_probs=32.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ..+.++.+||.+||..||.+||++.++++|+||..
T Consensus       244 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  278 (296)
T cd06618         244 GFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR  278 (296)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence            35788999999999999999999999999999986

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.09  E-value=2.2e-06  Score=71.40  Aligned_cols=66  Identities=23%  Similarity=0.268  Sum_probs=47.4

Q ss_pred             CcccccCCCCCCCCCH--HHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH
Q 042950            1 MAELLLFRPLFQGTDE--AEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~--~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta   78 (216)
                      +|||++|..+|...+.  .+.+...... ..                    .......+.++.+||.+||..||.+|+++
T Consensus       189 l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~  247 (258)
T cd05578         189 AYECLRGKRPYRGHSRTIRDQIRAKQET-AD--------------------VLYPATWSTEAIDAINKLLERDPQKRLGD  247 (258)
T ss_pred             HHHHHhCCCCCCCCCccHHHHHHHHhcc-cc--------------------ccCcccCcHHHHHHHHHHccCChhHcCCc
Confidence            4789999999987653  2333322221 10                    00112467899999999999999999999


Q ss_pred             --HHHHcCccc
Q 042950           79 --AEALQHLFF   87 (216)
Q Consensus        79 --~eaL~HpfF   87 (216)
                        .|+++||||
T Consensus       248 ~~~~l~~~~~~  258 (258)
T cd05578         248 NLKDLKNHPYF  258 (258)
T ss_pred             cHHHHhcCCCC
Confidence              999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.08  E-value=4.7e-06  Score=70.46  Aligned_cols=35  Identities=37%  Similarity=0.495  Sum_probs=33.0

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++.++.++|.+||..||.+|+++.++++|+||..
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~  258 (277)
T cd06641         224 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVR  258 (277)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhh
Confidence            46788999999999999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.07  E-value=2.8e-06  Score=72.29  Aligned_cols=34  Identities=29%  Similarity=0.452  Sum_probs=31.6

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++++.+||.+||.+||.+|||+.|++.|+||..
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         238 WSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             hHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence            3578899999999999999999999999999976

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.07  E-value=6.1e-06  Score=68.58  Aligned_cols=66  Identities=36%  Similarity=0.512  Sum_probs=50.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|..+|.+.+..+.+..|..  |...                   .....++.++.+||.+||..||.+|+++.+
T Consensus       191 ~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~  249 (256)
T cd08221         191 LYELLTLKRTFDATNPLNLVVKIVQ--GNYT-------------------PVVSVYSSELISLVHSLLQQDPEKRPTADE  249 (256)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCccccCHHHHHHHHHHcccCcccCCCHHH
Confidence            4688888888887776666666543  3211                   111346789999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+|+|+
T Consensus       250 ll~~~~l  256 (256)
T cd08221         250 VLDQPLL  256 (256)
T ss_pred             HhhCcCC
Confidence            9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.07  E-value=1.7e-06  Score=73.58  Aligned_cols=40  Identities=33%  Similarity=0.403  Sum_probs=34.6

Q ss_pred             CCCHHHHHHHHhccccCCCCCCC---HHHHHcCccccCCCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPT---AAEALQHLFFKRCLYAP   94 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~t---a~eaL~HpfF~~~~~~~   94 (216)
                      .++.++.+||.+||..||++|+|   +.++|+|+||+.+.|..
T Consensus       234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~  276 (288)
T cd05583         234 TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDD  276 (288)
T ss_pred             ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHH
Confidence            36788999999999999999998   56789999999976643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.07  E-value=2.5e-06  Score=71.84  Aligned_cols=35  Identities=23%  Similarity=0.215  Sum_probs=32.8

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+.++.+||.+||..||++|+++.+++.|+||.+.
T Consensus       227 ~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~  261 (277)
T cd06917         227 YSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH  261 (277)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence            57889999999999999999999999999999873

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.06  E-value=3.9e-06  Score=70.32  Aligned_cols=31  Identities=35%  Similarity=0.448  Sum_probs=29.5

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCcc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLF   86 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~Hpf   86 (216)
                      .+..+.+||.+||..||++|+++.++++|||
T Consensus       237 ~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         237 WSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            5678999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.05  E-value=4.7e-06  Score=70.74  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=31.8

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ++.++.+||.+||..||++|||+.|+++|+||..
T Consensus       238 ~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         238 FPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            5678999999999999999999999999999976

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.05  E-value=5.2e-06  Score=71.63  Aligned_cols=69  Identities=26%  Similarity=0.292  Sum_probs=49.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|...+..+.+..+.... .+.                 .  .....+..+.+||.+||..+|.+|+++.+
T Consensus       204 l~el~~g~~p~~~~~~~~~~~~~~~~~-~~~-----------------~--~~~~~~~~~~~li~~cl~~~P~~Rp~~~~  263 (308)
T cd06634         204 CIELAERKPPLFNMNAMSALYHIAQNE-SPA-----------------L--QSGHWSEYFRNFVDSCLQKIPQDRPTSEV  263 (308)
T ss_pred             HHHHHcCCCCCccccHHHHHHHHhhcC-CCC-----------------c--CcccccHHHHHHHHHHhhCCcccCCCHHH
Confidence            468888888877655544444443211 110                 0  01236788999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +++|+|+..
T Consensus       264 ll~~~~~~~  272 (308)
T cd06634         264 LLKHRFVLR  272 (308)
T ss_pred             HhhCccccc
Confidence            999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.03  E-value=3.7e-06  Score=73.40  Aligned_cols=39  Identities=21%  Similarity=0.313  Sum_probs=34.6

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCH------HHHHcCccccCCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTA------AEALQHLFFKRCLYA   93 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta------~eaL~HpfF~~~~~~   93 (216)
                      .++..+.+||.+||..||.+|+++      .+++.|+||....|.
T Consensus       225 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~  269 (327)
T cd05617         225 FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWD  269 (327)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence            468899999999999999999984      799999999987654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.03  E-value=5.9e-06  Score=70.11  Aligned_cols=70  Identities=27%  Similarity=0.351  Sum_probs=50.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+....+..+... +.+.                 +. ....++.++.+||.+||..||.+|+++.+
T Consensus       206 l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~-----------------~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  266 (286)
T cd06614         206 CIEMAEGEPPYLREPPLRALFLITTK-GIPP-----------------LK-NPEKWSPEFKDFLNKCLVKDPEKRPSAEE  266 (286)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhc-CCCC-----------------Cc-chhhCCHHHHHHHHHHhccChhhCcCHHH
Confidence            47888888888776655444444321 1110                 00 01235788999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+|+||..
T Consensus       267 il~~~~~~~  275 (286)
T cd06614         267 LLQHPFLKK  275 (286)
T ss_pred             HhhChHhhc
Confidence            999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.02  E-value=6.1e-06  Score=71.52  Aligned_cols=69  Identities=25%  Similarity=0.273  Sum_probs=51.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+++|.+.+....+..+......+.                    .....+..+.+||.+||..||.+|+++.+
T Consensus       214 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  273 (317)
T cd06635         214 CIELAERKPPLFNMNAMSALYHIAQNESPTL--------------------QSNEWSDYFRNFVDSCLQKIPQDRPTSEE  273 (317)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHhccCCCC--------------------CCccccHHHHHHHHHHccCCcccCcCHHH
Confidence            4789999998887766666666554211110                    01235678999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +++|+|+..
T Consensus       274 il~~~~~~~  282 (317)
T cd06635         274 LLKHMFVLR  282 (317)
T ss_pred             HHhChhhhc
Confidence            999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.02  E-value=4.9e-06  Score=70.26  Aligned_cols=36  Identities=39%  Similarity=0.474  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ..+.++.+||.+||..||++|+++.++|+|+||..+
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         224 QYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY  259 (277)
T ss_pred             ccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence            467889999999999999999999999999999874

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.01  E-value=5.1e-06  Score=82.72  Aligned_cols=70  Identities=23%  Similarity=0.215  Sum_probs=53.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.||...+...++..++...  +.                 +  .+...+.++.+||..||.+||.+||++.|
T Consensus       233 LYELLTGk~PF~~~~~~~qli~~lk~~--p~-----------------l--pi~~~S~eL~dLI~~~L~~dPeeRPSa~Q  291 (1021)
T PTZ00266        233 IYELCSGKTPFHKANNFSQLISELKRG--PD-----------------L--PIKGKSKELNILIKNLLNLSAKERPSALQ  291 (1021)
T ss_pred             HHHHHHCCCCCCcCCcHHHHHHHHhcC--CC-----------------C--CcCCCCHHHHHHHHHHhcCChhHCcCHHH
Confidence            589999999998776665555443321  10                 0  02245789999999999999999999999


Q ss_pred             HHcCccccCCC
Q 042950           81 ALQHLFFKRCL   91 (216)
Q Consensus        81 aL~HpfF~~~~   91 (216)
                      +|.|+||..+.
T Consensus       292 lL~h~~ik~i~  302 (1021)
T PTZ00266        292 CLGYQIIKNVG  302 (1021)
T ss_pred             HhccHHHhhcC
Confidence            99999998753

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=97.99  E-value=4.1e-06  Score=66.03  Aligned_cols=31  Identities=19%  Similarity=0.105  Sum_probs=29.2

Q ss_pred             HHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           59 DAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        59 ~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ++.+||.+||..||.+|+++.+++.|+|+..
T Consensus       140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      140 SFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             hHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            6899999999999999999999999999864

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=97.99  E-value=5.1e-06  Score=76.75  Aligned_cols=68  Identities=28%  Similarity=0.394  Sum_probs=54.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..++.  |...                   .....++.++.+||.+||..||++|+++.+
T Consensus       261 l~el~tg~~Pf~~~~~~~~~~~~~~--~~~~-------------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~  319 (478)
T PTZ00267        261 LYELLTLHRPFKGPSQREIMQQVLY--GKYD-------------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQ  319 (478)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHh--CCCC-------------------CCCccCCHHHHHHHHHHhccChhhCcCHHH
Confidence            5799999999998887777776654  2211                   011246789999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|.|+|++.
T Consensus       320 ~l~~~~~~~  328 (478)
T PTZ00267        320 LLHTEFLKY  328 (478)
T ss_pred             HHhCHHHHH
Confidence            999999975

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=97.98  E-value=7.9e-06  Score=66.22  Aligned_cols=32  Identities=56%  Similarity=0.653  Sum_probs=30.6

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFF   87 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF   87 (216)
                      ++.++.++|.+||..||++|+++.++++||||
T Consensus       213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      213 ISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            67889999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=97.95  E-value=3.2e-06  Score=70.80  Aligned_cols=32  Identities=38%  Similarity=0.466  Sum_probs=29.9

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCcc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLF   86 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~Hpf   86 (216)
                      ..+..+.+||.+||..||++|||++++|+|.|
T Consensus       236 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         236 KWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             ccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            35789999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=97.94  E-value=1e-05  Score=67.74  Aligned_cols=67  Identities=25%  Similarity=0.437  Sum_probs=46.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+....+.++   ...+...                 ..-...+..+.++|.+|| .+|++||++++
T Consensus       199 l~el~~g~~p~~~~~~~~~~~~~---~~~~~~~-----------------~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~  257 (265)
T cd06652         199 VVEMLTEKPPWAEFEAMAAIFKI---ATQPTNP-----------------VLPPHVSDHCRDFLKRIF-VEAKLRPSADE  257 (265)
T ss_pred             HHHHhhCCCCCCccchHHHHHHH---hcCCCCC-----------------CCchhhCHHHHHHHHHHh-cChhhCCCHHH
Confidence            47888999988765544443333   2221110                 011246788999999999 59999999999


Q ss_pred             HHcCcccc
Q 042950           81 ALQHLFFK   88 (216)
Q Consensus        81 aL~HpfF~   88 (216)
                      +++|+|+.
T Consensus       258 il~~~~~~  265 (265)
T cd06652         258 LLRHTFVH  265 (265)
T ss_pred             HhcCcccC
Confidence            99999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.94  E-value=1.4e-05  Score=72.60  Aligned_cols=77  Identities=25%  Similarity=0.242  Sum_probs=52.2

Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHHH
Q 042950            2 AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEA   81 (216)
Q Consensus         2 ~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~ea   81 (216)
                      .||.+|+.||.---....|.+  ++-|.|+.....   .+       -.+-....+..+..||..||+.||.+|+||+++
T Consensus       223 ~ELA~G~aPf~k~pPmkvLl~--tLqn~pp~~~t~---~~-------~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskL  290 (516)
T KOG0582|consen  223 CELAHGHAPFSKYPPMKVLLL--TLQNDPPTLLTS---GL-------DKDEDKKFSKSFREMIALCLVKDPSKRPTASKL  290 (516)
T ss_pred             HHHhcCCCCcccCChHHHHHH--HhcCCCCCcccc---cC-------ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHH
Confidence            489999999976555544443  344665421100   00       000012356689999999999999999999999


Q ss_pred             HcCccccCC
Q 042950           82 LQHLFFKRC   90 (216)
Q Consensus        82 L~HpfF~~~   90 (216)
                      |+|+||+..
T Consensus       291 lkh~FFk~~  299 (516)
T KOG0582|consen  291 LKHAFFKKA  299 (516)
T ss_pred             hccHHHhhc
Confidence            999999874

>PHA02988 hypothetical protein; Provisional

Probab=97.92  E-value=1.6e-05  Score=68.09  Aligned_cols=62  Identities=21%  Similarity=0.231  Sum_probs=47.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCC-CCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMP-SASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++|+.||.+.+..+.+..++.....+.                     ++ ..++++.+||.+||..||.+|||+.
T Consensus       212 l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~---------------------~~~~~~~~l~~li~~cl~~dp~~Rps~~  270 (283)
T PHA02988        212 LWEIFTGKIPFENLTTKEIYDLIINKNNSLK---------------------LPLDCPLEIKCIVEACTSHDSIKRPNIK  270 (283)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC---------------------CCCcCcHHHHHHHHHHhcCCcccCcCHH
Confidence            5899999999998876666665544222111                     12 4678999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       271 ell~  274 (283)
T PHA02988        271 EILY  274 (283)
T ss_pred             HHHH
Confidence            9985

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.92  E-value=7.8e-06  Score=74.75  Aligned_cols=70  Identities=26%  Similarity=0.201  Sum_probs=57.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||.|+.|+-+|.++.+.+...+|++.-=.                   +. ..+.+.+++.|||.+||..||.+|++..+
T Consensus       309 LYCllfG~~PF~~~~~~~l~~KIvn~pL~-------------------fP-~~pe~~e~~kDli~~lL~KdP~~Ri~l~~  368 (576)
T KOG0585|consen  309 LYCLLFGQLPFFDDFELELFDKIVNDPLE-------------------FP-ENPEINEDLKDLIKRLLEKDPEQRITLPD  368 (576)
T ss_pred             HHHhhhccCCcccchHHHHHHHHhcCccc-------------------CC-CcccccHHHHHHHHHHhhcChhheeehhh
Confidence            68899999999999999999999762110                   00 12346899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +..|||....
T Consensus       369 ik~Hpwvt~~  378 (576)
T KOG0585|consen  369 IKLHPWVTRD  378 (576)
T ss_pred             heecceeccC
Confidence            9999999864

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.87  E-value=2e-05  Score=68.05  Aligned_cols=71  Identities=25%  Similarity=0.326  Sum_probs=57.2

Q ss_pred             CcccccCCCCCCC-CCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQG-TDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g-~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||.||+-+|.| +.+.+.|.+|++-.  |+.                |.. -...|+++++|+..||+.|+.+||.-.
T Consensus       284 lveLaTg~yPy~~c~tdFe~ltkvln~e--PP~----------------L~~-~~gFSp~F~~fv~~CL~kd~r~RP~Y~  344 (391)
T KOG0983|consen  284 LVELATGQYPYKGCKTDFEVLTKVLNEE--PPL----------------LPG-HMGFSPDFQSFVKDCLTKDHRKRPKYN  344 (391)
T ss_pred             hhhhhcccCCCCCCCccHHHHHHHHhcC--CCC----------------CCc-ccCcCHHHHHHHHHHhhcCcccCcchH
Confidence            5899999999998 56888898887732  210                110 113799999999999999999999999


Q ss_pred             HHHcCccccCC
Q 042950           80 EALQHLFFKRC   90 (216)
Q Consensus        80 eaL~HpfF~~~   90 (216)
                      ++|+|||+..+
T Consensus       345 ~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  345 KLLEHPFIKRY  355 (391)
T ss_pred             HHhcCcceeec
Confidence            99999999873

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=97.86  E-value=3.2e-06  Score=70.16  Aligned_cols=33  Identities=30%  Similarity=0.513  Sum_probs=30.7

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCH-----HHHHcCccc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTA-----AEALQHLFF   87 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta-----~eaL~HpfF   87 (216)
                      .++.++.+||.+||..||++|+++     +++++||||
T Consensus       200 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         200 WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             cCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            468899999999999999999986     999999998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=97.85  E-value=9.2e-06  Score=69.05  Aligned_cols=38  Identities=34%  Similarity=0.413  Sum_probs=34.1

Q ss_pred             CCCHHHHHHHHhccccCCCCCC-----CHHHHHcCccccCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRP-----TAAEALQHLFFKRCLY   92 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~-----ta~eaL~HpfF~~~~~   92 (216)
                      .++..+.+||.+||..||++|+     ++.+++.||||....|
T Consensus       234 ~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  276 (290)
T cd05613         234 EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW  276 (290)
T ss_pred             cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence            3678899999999999999997     8999999999998654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.84  E-value=3.7e-06  Score=79.30  Aligned_cols=99  Identities=23%  Similarity=0.350  Sum_probs=69.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||+.|+++|-..+..+.-.+|++         |.....++         .-.+++.++.+||.+|| -++++|+.   
T Consensus       861 l~em~~g~~pf~~~tp~~tq~kv~n---------w~~~l~~~---------~~~~ls~e~~~li~kLc-~sad~RLGkng  921 (1034)
T KOG0608|consen  861 LYEMLVGQPPFLADTPGETQYKVIN---------WRNFLHIP---------YQGNLSKEALDLIQKLC-CSADSRLGKNG  921 (1034)
T ss_pred             HHHHhhCCCCccCCCCCcceeeeee---------hhhccccc---------cccccCHHHHHHHHHHh-cChhhhhcccc
Confidence            6899999999987665444444433         32111110         01258999999999987 58999995   


Q ss_pred             HHHHHcCccccCCCCCCCCCCCC-ccccchhhhhhhhhccccCC
Q 042950           78 AAEALQHLFFKRCLYAPPHIRSV-PAVATTTRGMLKQQGAGIEA  120 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  120 (216)
                      ++|+..||||+.++|..  +|.. +++.+.+.+..|.++++...
T Consensus       922 ~d~vKaHpfFkgIDfss--lRkq~ApYIP~ItHptDTSNFdpvd  963 (1034)
T KOG0608|consen  922 ADQVKAHPFFKGIDFSS--LRKQRAPYIPRITHPTDTSNFDPVD  963 (1034)
T ss_pred             hhhhhcCccccccchHh--hhhccCCcCccccCCCccccCCcCC
Confidence            78899999999999988  4443 44777777777777665544

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=97.84  E-value=3e-05  Score=65.98  Aligned_cols=38  Identities=21%  Similarity=0.388  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc------CccccCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ------HLFFKRCLY   92 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~------HpfF~~~~~   92 (216)
                      ..+..+.+||.+||..||.+|||+.++++      ||||.++.|
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         245 NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence            35688999999999999999999999987      999998654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=97.82  E-value=8.1e-06  Score=74.36  Aligned_cols=80  Identities=24%  Similarity=0.214  Sum_probs=55.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||+.|+.||....+.+--.+|-...-. ..+                 ++-.+.|+++.+|++.+|..||.+|+.   
T Consensus       376 lYemi~G~sPFr~~KeKvk~eEvdrr~~~-~~~-----------------ey~~kFS~eakslc~~LL~Kdp~~RLGcrg  437 (591)
T KOG0986|consen  376 LYEMIAGHSPFRQRKEKVKREEVDRRTLE-DPE-----------------EYSDKFSEEAKSLCEGLLTKDPEKRLGCRG  437 (591)
T ss_pred             HHHHHcccCchhhhhhhhhHHHHHHHHhc-chh-----------------hcccccCHHHHHHHHHHHccCHHHhccCCC
Confidence            68999999999865433222222111100 011                 112358999999999999999999995   


Q ss_pred             --HHHHHcCccccCCCCCCCCCC
Q 042950           78 --AAEALQHLFFKRCLYAPPHIR   98 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~~~~~   98 (216)
                        +.++.+||||+++.|......
T Consensus       438 ~ga~evk~HpfFk~lnw~rleag  460 (591)
T KOG0986|consen  438 EGAQEVKEHPFFKDLNWRRLEAG  460 (591)
T ss_pred             cCcchhhhCcccccCCHhHHhcc
Confidence              679999999999988654443

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=97.71  E-value=4.9e-05  Score=63.15  Aligned_cols=63  Identities=25%  Similarity=0.398  Sum_probs=46.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+....+..+..  |..                   ..+....+.++.+||.+||..||++||++.+
T Consensus       190 ~~~l~~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~  248 (255)
T cd08219         190 LYELCTLKHPFQANSWKNLILKVCQ--GSY-------------------KPLPSHYSYELRSLIKQMFKRNPRSRPSATT  248 (255)
T ss_pred             heehhhccCCCCCCCHHHHHHHHhc--CCC-------------------CCCCcccCHHHHHHHHHHHhCCcccCCCHHH
Confidence            5799999999988776555555433  211                   0111246788999999999999999999999


Q ss_pred             HHcC
Q 042950           81 ALQH   84 (216)
Q Consensus        81 aL~H   84 (216)
                      +|+-
T Consensus       249 il~~  252 (255)
T cd08219         249 ILSR  252 (255)
T ss_pred             Hhhc
Confidence            9864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=97.69  E-value=3.1e-05  Score=64.86  Aligned_cols=66  Identities=21%  Similarity=0.380  Sum_probs=46.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+++|........+.   ++...+....                 +-..+++++.+||.+||. +|.+|+++.+
T Consensus       199 l~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~-----------------~p~~~~~~~~~~i~~~l~-~~~~r~~~~~  257 (264)
T cd06653         199 VVEMLTEKPPWAEYEAMAAIF---KIATQPTKPM-----------------LPDGVSDACRDFLKQIFV-EEKRRPTAEF  257 (264)
T ss_pred             HHHHHhCCCCCCccCHHHHHH---HHHcCCCCCC-----------------CCcccCHHHHHHHHHHhc-CcccCccHHH
Confidence            478899999997654444333   3333221111                 113478899999999999 5799999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|.|||.
T Consensus       258 ~~~~~~~  264 (264)
T cd06653         258 LLRHPFV  264 (264)
T ss_pred             HhcCCCC
Confidence            9999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.68  E-value=6.9e-06  Score=74.22  Aligned_cols=35  Identities=34%  Similarity=0.443  Sum_probs=33.4

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ..++.+.+||..||..||+.|++|.++|+|.|.+.
T Consensus       234 ~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  234 DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence            57889999999999999999999999999999987

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.55  E-value=8.2e-05  Score=67.81  Aligned_cols=68  Identities=26%  Similarity=0.387  Sum_probs=60.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++-++.|.+.+-...+.+|+..+..|-...                     .+.++..||+.||..+|..||+|.+
T Consensus       196 ~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~---------------------ys~el~~lv~~~l~~~P~~RPsa~~  254 (426)
T KOG0589|consen  196 LYEMCTLKPAFKASNMSELILKINRGLYSPLPSM---------------------YSSELRSLVKSMLRKNPEHRPSALE  254 (426)
T ss_pred             HHHHHhcccccCccchHHHHHHHhhccCCCCCcc---------------------ccHHHHHHHHHHhhcCCccCCCHHH
Confidence            5899999999999999999999999876664433                     4789999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|.+|....
T Consensus       255 LL~~P~l~~  263 (426)
T KOG0589|consen  255 LLRRPHLLR  263 (426)
T ss_pred             HhhChhhhh
Confidence            999988864

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=97.54  E-value=0.00013  Score=61.64  Aligned_cols=63  Identities=16%  Similarity=0.177  Sum_probs=45.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..+... +.+                    .....++..+.+||.+||..||++||++.
T Consensus       211 l~el~~~g~~pf~~~~~~~~~~~~~~~-~~~--------------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~  269 (277)
T cd05036         211 LWEIFSLGYMPYPGRTNQEVMEFVTGG-GRL--------------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFA  269 (277)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcC-CcC--------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence            468886 88899887765544433221 110                    01124678899999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++|+|
T Consensus       270 ~vl~~  274 (277)
T cd05036         270 TILER  274 (277)
T ss_pred             HHHHH
Confidence            99987

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=97.52  E-value=0.00016  Score=60.53  Aligned_cols=63  Identities=19%  Similarity=0.233  Sum_probs=44.7

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|++.+..+....+......                     ......+.++.+||.+||..||++|||+.
T Consensus       195 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~  253 (263)
T cd05052         195 LWEIATYGMSPYPGIDLSQVYELLEKGYRM---------------------ERPEGCPPKVYELMRACWQWNPSDRPSFA  253 (263)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHCCCCC---------------------CCCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence            478887 88899887655544443221100                     11134678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++.
T Consensus       254 ~l~~~  258 (263)
T cd05052         254 EIHQA  258 (263)
T ss_pred             HHHHH
Confidence            98763

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=97.50  E-value=0.00017  Score=60.12  Aligned_cols=62  Identities=13%  Similarity=0.175  Sum_probs=45.4

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..+......+                     ....++.++.+||.+||..||++||+++
T Consensus       194 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~  252 (261)
T cd05072         194 LYEIVTYGKIPYPGMSNSDVMSALQRGYRMP---------------------RMENCPDELYDIMKTCWKEKAEERPTFD  252 (261)
T ss_pred             HHHHHccCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCCCCCHHHHHHHHHHccCCcccCcCHH
Confidence            478887 888888877666666554321111                     1234678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       253 ~i~~  256 (261)
T cd05072         253 YLQS  256 (261)
T ss_pred             HHHH
Confidence            8864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.49  E-value=0.00014  Score=69.14  Aligned_cols=37  Identities=24%  Similarity=0.350  Sum_probs=33.5

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~~   92 (216)
                      -+..+.|||++||+.||..|++++++|+||||.+.+.
T Consensus       261 Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  261 WSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS  297 (1187)
T ss_pred             hhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence            4678899999999999999999999999999997543

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=97.48  E-value=0.00014  Score=60.68  Aligned_cols=63  Identities=21%  Similarity=0.197  Sum_probs=45.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|.+.+..+.+..+..  |..                   .......+.++.+||.+||..||.+|||+.
T Consensus       205 l~el~~~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  263 (273)
T cd05035         205 MWEIATRGQTPYPGVENHEIYDYLRH--GNR-------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFT  263 (273)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHc--CCC-------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            478888 8888887766555544432  110                   011234678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++.+
T Consensus       264 e~~~~  268 (273)
T cd05035         264 KLREV  268 (273)
T ss_pred             HHHHH
Confidence            99865

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.48  E-value=9.9e-05  Score=69.09  Aligned_cols=37  Identities=22%  Similarity=0.254  Sum_probs=32.8

Q ss_pred             CCCCCHHHHHHHHhccccCC---CCCCCHHHHHcCccccC
Q 042950           53 MPSASKDAINLIESLCSWDP---CKRPTAAEALQHLFFKR   89 (216)
Q Consensus        53 ~~~~s~~~~dLL~~mL~~dP---~kR~ta~eaL~HpfF~~   89 (216)
                      +...++++.|||.+||..+|   .+|+|+.|||+||||..
T Consensus       466 ~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        466 LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            44578999999999999876   78999999999999964

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=97.48  E-value=0.00013  Score=60.89  Aligned_cols=61  Identities=20%  Similarity=0.186  Sum_probs=45.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+.+..+......+                     .....+..+.+||.+||..||.+|||+.
T Consensus       193 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~  251 (260)
T cd05070         193 LTELVTKGRVPYPGMNNREVLEQVERGYRMP---------------------CPQDCPISLHELMLQCWKKDPEERPTFE  251 (260)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCCcCCHHHHHHHHHHcccCcccCcCHH
Confidence            478888 889998877766666654311110                     1124678899999999999999999999


Q ss_pred             HHH
Q 042950           80 EAL   82 (216)
Q Consensus        80 eaL   82 (216)
                      +++
T Consensus       252 ~l~  254 (260)
T cd05070         252 YLQ  254 (260)
T ss_pred             HHH
Confidence            886

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=97.47  E-value=0.00012  Score=61.76  Aligned_cols=63  Identities=14%  Similarity=0.078  Sum_probs=46.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |..+|.+.+..+....|.+  +..                   ......++.++.+|+.+||..||.+||++.
T Consensus       216 l~el~~~g~~p~~~~~~~~~~~~i~~--~~~-------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~  274 (283)
T cd05048         216 LWEIFSYGLQPYYGFSNQEVIEMIRS--RQL-------------------LPCPEDCPARVYALMIECWNEIPARRPRFK  274 (283)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHc--CCc-------------------CCCcccCCHHHHHHHHHHccCChhhCcCHH
Confidence            478887 8888888776655554433  111                   011134688999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       275 ~i~~~  279 (283)
T cd05048         275 DIHTR  279 (283)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=97.47  E-value=0.00011  Score=61.68  Aligned_cols=62  Identities=13%  Similarity=0.172  Sum_probs=44.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |..+|.+.+..+.+..|..  |..                   .......+.++.+||.+||..||.+||++.
T Consensus       214 l~e~~~~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  272 (280)
T cd05049         214 LWEIFTYGKQPWYGLSNEEVIECITQ--GRL-------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIK  272 (280)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHc--CCc-------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence            468887 8888877666555555432  211                   011124678999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      |+++
T Consensus       273 eil~  276 (280)
T cd05049         273 DIHE  276 (280)
T ss_pred             HHHH
Confidence            9975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.44  E-value=0.00023  Score=68.23  Aligned_cols=36  Identities=36%  Similarity=0.549  Sum_probs=33.6

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .++.++.+||.+|+..||.+|++|.++|..||++..
T Consensus       803 elsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             HHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            468899999999999999999999999999999874

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=97.43  E-value=0.00017  Score=59.47  Aligned_cols=63  Identities=19%  Similarity=0.221  Sum_probs=45.7

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |..+|.+.+..+.+..+..  +..                   ......++.++.++|.+||..||.+|||+.
T Consensus       197 l~~l~~~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  255 (262)
T cd00192         197 LWEIFTLGATPYPGLSNEEVLEYLRK--GYR-------------------LPKPEYCPDELYELMLSCWQLDPEDRPTFS  255 (262)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHc--CCC-------------------CCCCccCChHHHHHHHHHccCCcccCcCHH
Confidence            467887 5888887766655555543  110                   011124678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++|
T Consensus       256 ~l~~~  260 (262)
T cd00192         256 ELVER  260 (262)
T ss_pred             HHHHh
Confidence            99875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=97.43  E-value=0.00017  Score=60.42  Aligned_cols=64  Identities=20%  Similarity=0.219  Sum_probs=43.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+++|...+.......+......+.                  .  ....+.++.+||.+||..||++||++.|
T Consensus       203 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e  262 (269)
T cd08528         203 LYQMCTLQPPFYSTNMLSLATKIVEAVYEPL------------------P--EGMYSEDVTDVITSCLTPDAEARPDIIQ  262 (269)
T ss_pred             HHHHHhCCCcccccCHHHHHHHHhhccCCcC------------------C--cccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence            4688888888876555444444433221110                  0  1135789999999999999999999999


Q ss_pred             HHcC
Q 042950           81 ALQH   84 (216)
Q Consensus        81 aL~H   84 (216)
                      +..+
T Consensus       263 ~~~~  266 (269)
T cd08528         263 VSAM  266 (269)
T ss_pred             HHHH
Confidence            8754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=97.43  E-value=0.00023  Score=59.40  Aligned_cols=62  Identities=19%  Similarity=0.184  Sum_probs=45.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+....+.+..+......+                     .....+..+.+||.+||..||.+||++.
T Consensus       193 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~  251 (260)
T cd05069         193 LTELVTKGRVPYPGMVNREVLEQVERGYRMP---------------------CPQGCPESLHELMKLCWKKDPDERPTFE  251 (260)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCcccCHHHHHHHHHHccCCcccCcCHH
Confidence            478998 899998877666665554321100                     1124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       252 ~i~~  255 (260)
T cd05069         252 YIQS  255 (260)
T ss_pred             HHHH
Confidence            8875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=97.43  E-value=0.00022  Score=59.46  Aligned_cols=62  Identities=16%  Similarity=0.173  Sum_probs=44.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+.+..+......+                     .....+.++.+||.+||..||++||+++
T Consensus       193 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~  251 (260)
T cd05067         193 LTEIVTYGRIPYPGMTNPEVIQNLERGYRMP---------------------RPDNCPEELYELMRLCWKEKPEERPTFE  251 (260)
T ss_pred             HHHHHhCCCCCCCCCChHHHHHHHHcCCCCC---------------------CCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            468888 899998877665555543321111                     1123578899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      +++.
T Consensus       252 ~l~~  255 (260)
T cd05067         252 YLRS  255 (260)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=97.42  E-value=0.00014  Score=60.48  Aligned_cols=62  Identities=24%  Similarity=0.117  Sum_probs=45.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+.+..|.......                  .   ....+.++.+||.+||..||.+||++.
T Consensus       191 l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~------------------~---~~~~~~~~~~li~~c~~~~p~~Rps~~  249 (256)
T cd05114         191 MWEVFTEGKMPFEKKSNYEVVEMISRGFRLY------------------R---PKLASMTVYEVMYSCWHEKPEGRPTFA  249 (256)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC------------------C---CCCCCHHHHHHHHHHccCCcccCcCHH
Confidence            478888 888998877766666664411100                  0   112467889999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       250 ~l~~  253 (256)
T cd05114         250 ELLR  253 (256)
T ss_pred             HHHH
Confidence            9985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=97.42  E-value=0.00022  Score=61.03  Aligned_cols=63  Identities=17%  Similarity=0.121  Sum_probs=45.4

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |..+|.+.+..+.+..+......                     .....++.++.+||.+||..||.+||+++
T Consensus       208 l~el~t~g~~pf~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  266 (297)
T cd05089         208 LWEIVSLGGTPYCGMTCAELYEKLPQGYRM---------------------EKPRNCDDEVYELMRQCWRDRPYERPPFA  266 (297)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHhcCCCC---------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            468886 88888877766655554331111                     01124678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++.
T Consensus       267 ~i~~~  271 (297)
T cd05089         267 QISVQ  271 (297)
T ss_pred             HHHHH
Confidence            99765

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=97.39  E-value=0.00017  Score=60.29  Aligned_cols=63  Identities=19%  Similarity=0.100  Sum_probs=44.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|...+..+....+......+                     .....+..+.+||.+||..||.+||++.
T Consensus       191 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~  249 (256)
T cd05113         191 MWEVYSLGKMPYERFNNSETVEKVSQGLRLY---------------------RPHLASEKVYAIMYSCWHEKAEERPTFQ  249 (256)
T ss_pred             HHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC---------------------CCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence            467777 788887666555555554321110                     0123578899999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++.+
T Consensus       250 ~ll~~  254 (256)
T cd05113         250 QLLSS  254 (256)
T ss_pred             HHHHh
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=97.37  E-value=0.0003  Score=58.46  Aligned_cols=62  Identities=19%  Similarity=0.263  Sum_probs=46.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ++||++ |+.+|.+.+..+.+..+......+.                     ....+.++.++|.+||..||.+||++.
T Consensus       194 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~  252 (261)
T cd05034         194 LTEIVTYGRVPYPGMTNREVLEQVERGYRMPR---------------------PPNCPEELYDLMLQCWDKDPEERPTFE  252 (261)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC---------------------CCCCCHHHHHHHHHHcccCcccCCCHH
Confidence            468887 9999988877777776654221110                     123467899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       253 ~l~~  256 (261)
T cd05034         253 YLQS  256 (261)
T ss_pred             HHHH
Confidence            8864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=97.37  E-value=0.00028  Score=59.50  Aligned_cols=63  Identities=14%  Similarity=0.205  Sum_probs=44.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|.+.+..+.+..+... +.+                    ......+..+.+||.+||..||++|||+.
T Consensus       211 l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~  269 (277)
T cd05062         211 LWEIATLAEQPYQGMSNEQVLRFVMEG-GLL--------------------DKPDNCPDMLFELMRMCWQYNPKMRPSFL  269 (277)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcC-CcC--------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            468887 67888777665555544331 100                    11124577899999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |++++
T Consensus       270 e~l~~  274 (277)
T cd05062         270 EIISS  274 (277)
T ss_pred             HHHHH
Confidence            99865

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=97.36  E-value=0.00034  Score=58.16  Aligned_cols=62  Identities=13%  Similarity=0.191  Sum_probs=45.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..+......+                     .....++.+.++|.+||..||.+|||+.
T Consensus       194 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~  252 (261)
T cd05148         194 LYEMFTYGQVPYPGMNNHEVYDQITAGYRMP---------------------CPAKCPQEIYKIMLECWAAEPEDRPSFK  252 (261)
T ss_pred             HHHHHcCCCCCCCcCCHHHHHHHHHhCCcCC---------------------CCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence            468887 788888877666666655321111                     0124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       253 ~l~~  256 (261)
T cd05148         253 ALRE  256 (261)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=97.35  E-value=0.00029  Score=58.74  Aligned_cols=62  Identities=18%  Similarity=0.076  Sum_probs=44.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+.+..|.+... +                    ......++++.+||.+||..||++||++.
T Consensus       188 l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~--------------------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~  246 (257)
T cd05116         188 MWEAFSYGQKPYKGMKGNEVTQMIESGER-M--------------------ECPQRCPPEMYDLMKLCWTYGVDERPGFA  246 (257)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHCCCC-C--------------------CCCCCCCHHHHHHHHHHhccCchhCcCHH
Confidence            478887 8889987766655555533111 0                    01124788999999999999999999998


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++..
T Consensus       247 ~i~~  250 (257)
T cd05116         247 VVEL  250 (257)
T ss_pred             HHHH
Confidence            8754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=97.33  E-value=0.00031  Score=58.59  Aligned_cols=29  Identities=24%  Similarity=0.163  Sum_probs=26.6

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .+.++.+||.+||..||.+||++.++|+.
T Consensus       233 ~~~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         233 YSEKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             cCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence            56789999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=97.32  E-value=0.00032  Score=58.68  Aligned_cols=63  Identities=19%  Similarity=0.214  Sum_probs=43.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+....+..  |..                   ....+..+..+.+||.+||..||++|||+.
T Consensus       204 l~el~~~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  262 (272)
T cd05075         204 MWEIATRGQTPYPGVENSEIYDYLRQ--GNR-------------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFE  262 (272)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHc--CCC-------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence            467877 7888877665444443322  110                   011234678899999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       263 ~l~~~  267 (272)
T cd05075         263 TLRCE  267 (272)
T ss_pred             HHHHH
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=97.32  E-value=5.6e-05  Score=66.09  Aligned_cols=34  Identities=29%  Similarity=0.321  Sum_probs=32.2

Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      +.++-|||++||..+|++|-||.++|+|+|.++.
T Consensus       256 S~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  256 SSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             hhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence            6789999999999999999999999999999973

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=97.30  E-value=0.00039  Score=57.28  Aligned_cols=62  Identities=16%  Similarity=0.168  Sum_probs=43.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ++||++ |+++|.+.+..+.+..+....-                     .......+.++.++|.+||..||.+|||+.
T Consensus       194 ~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~  252 (258)
T smart00219      194 LWEIFTLGESPYPGMSNEEVLEYLKKGYR---------------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFS  252 (258)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHhcCCC---------------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHH
Confidence            356776 6777777665555554433110                     011123688999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       253 ~ll~  256 (258)
T smart00219      253 ELVE  256 (258)
T ss_pred             HHHh
Confidence            9986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=97.30  E-value=0.00033  Score=58.72  Aligned_cols=63  Identities=27%  Similarity=0.426  Sum_probs=44.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ++||++ |+++|.+.+..+.+..+..  +..                  + .....++.++.+||.+||.+||.+|||+.
T Consensus       198 l~el~~~g~~pf~~~~~~~~~~~~~~--~~~------------------~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  256 (270)
T cd05056         198 MWEILMLGVKPFQGVKNNDVIGRIEN--GER------------------L-PMPPNCPPTLYSLMTKCWAYDPSKRPRFT  256 (270)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHc--CCc------------------C-CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            357664 8888877776655554432  110                  0 11235678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++..
T Consensus       257 ~~~~~  261 (270)
T cd05056         257 ELKAQ  261 (270)
T ss_pred             HHHHH
Confidence            98764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=97.30  E-value=0.0004  Score=58.69  Aligned_cols=63  Identities=11%  Similarity=0.078  Sum_probs=45.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+.+..+... ..+                    .....++.++.+||.+||..||.+||++.
T Consensus       216 l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~--------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~  274 (283)
T cd05090         216 LWEIFSFGLQPYYGFSNQEVIEMVRKR-QLL--------------------PCSEDCPPRMYSLMTECWQEGPSRRPRFK  274 (283)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcC-CcC--------------------CCCCCCCHHHHHHHHHHcccCcccCcCHH
Confidence            478887 88888887665554444321 100                    01124678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       275 ~i~~~  279 (283)
T cd05090         275 DIHTR  279 (283)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=97.29  E-value=0.00027  Score=58.61  Aligned_cols=63  Identities=17%  Similarity=0.163  Sum_probs=42.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|...+..+.+..+.+....                   +  .....+.++.+|+.+||..||++|||+.
T Consensus       191 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~--~~~~~~~~~~~l~~~~l~~~p~~Rp~~~  249 (256)
T cd05112         191 MWEVFSEGKTPYENRSNSEVVETINAGFRL-------------------Y--KPRLASQSVYELMQHCWKERPEDRPSFS  249 (256)
T ss_pred             HHHHHcCCCCCCCcCCHHHHHHHHhCCCCC-------------------C--CCCCCCHHHHHHHHHHcccChhhCCCHH
Confidence            467776 77888766655555444221000                   0  0012578899999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       250 ~~l~~  254 (256)
T cd05112         250 LLLHQ  254 (256)
T ss_pred             HHHHh
Confidence            99874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=97.29  E-value=0.00043  Score=57.89  Aligned_cols=62  Identities=16%  Similarity=0.150  Sum_probs=45.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..|......|.                     ....+.++.+||.+||..||.+||++.
T Consensus       200 l~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~---------------------~~~~~~~~~~li~~c~~~~p~~Rp~~~  258 (268)
T cd05063         200 MWEVMSFGERPYWDMSNHEVMKAINDGFRLPA---------------------PMDCPSAVYQLMLQCWQQDRARRPRFV  258 (268)
T ss_pred             HHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCC---------------------CCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence            478776 8888887776666666644222111                     113568899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       259 ~i~~  262 (268)
T cd05063         259 DIVN  262 (268)
T ss_pred             HHHH
Confidence            9975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=97.29  E-value=0.00035  Score=58.15  Aligned_cols=63  Identities=14%  Similarity=0.093  Sum_probs=44.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..+......+                     .....+.++.+|+.+||..+|++|+|+.
T Consensus       191 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~cl~~~p~~Rpt~~  249 (256)
T cd05059         191 MWEVFSEGKMPYERFSNSEVVESVSAGYRLY---------------------RPKLAPTEVYTIMYSCWHEKPEDRPAFK  249 (256)
T ss_pred             HHHHhccCCCCCCCCCHHHHHHHHHcCCcCC---------------------CCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence            467887 788887766655555443321110                     1123678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++.
T Consensus       250 ~~l~~  254 (256)
T cd05059         250 KLLSQ  254 (256)
T ss_pred             HHHHH
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=97.28  E-value=0.00037  Score=59.23  Aligned_cols=62  Identities=15%  Similarity=0.138  Sum_probs=45.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|.+.+..+.+..|..  |...                   ......+.++.+||.+||..||.+|||+.
T Consensus       212 l~~l~t~g~~p~~~~~~~~~~~~i~~--~~~~-------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  270 (288)
T cd05093         212 LWEIFTYGKQPWYQLSNNEVIECITQ--GRVL-------------------QRPRTCPKEVYDLMLGCWQREPHMRLNIK  270 (288)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHc--CCcC-------------------CCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            478887 8888887776666665543  2110                   01124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      +++.
T Consensus       271 ~v~~  274 (288)
T cd05093         271 EIHS  274 (288)
T ss_pred             HHHH
Confidence            9854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=97.28  E-value=0.00039  Score=57.98  Aligned_cols=62  Identities=21%  Similarity=0.266  Sum_probs=44.9

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ++||++ |+.+|.+.+....+..|......+                     .....+..+.+||.+||..||.+||++.
T Consensus       194 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~  252 (261)
T cd05068         194 LTEIVTYGRMPYPGMTNAEVLQQVDQGYRMP---------------------CPPGCPKELYDIMLDCWKEDPDDRPTFE  252 (261)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCCcCCHHHHHHHHHHhhcCcccCCCHH
Confidence            468888 888998877666555553321111                     1124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       253 ~l~~  256 (261)
T cd05068         253 TLQW  256 (261)
T ss_pred             HHHH
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=97.27  E-value=0.00031  Score=59.29  Aligned_cols=63  Identities=13%  Similarity=0.047  Sum_probs=46.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+.+..|...-..+                     +-..++..+.+||.+||..||.+||++.
T Consensus       216 l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~~~~li~~cl~~~p~~RP~~~  274 (283)
T cd05091         216 LWEVFSYGLQPYCGYSNQDVIEMIRNRQVLP---------------------CPDDCPAWVYTLMLECWNEFPSRRPRFK  274 (283)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC---------------------CCCCCCHHHHHHHHHHhCCCcccCCCHH
Confidence            478887 888888877666666554421110                     1124678899999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++.
T Consensus       275 ~i~~~  279 (283)
T cd05091         275 DIHSR  279 (283)
T ss_pred             HHHHH
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=97.25  E-value=0.00046  Score=58.54  Aligned_cols=30  Identities=17%  Similarity=0.330  Sum_probs=27.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..+.++.+||.+||.+||.+|||+.+++++
T Consensus       258 ~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         258 NCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=97.24  E-value=0.00039  Score=60.58  Aligned_cols=63  Identities=16%  Similarity=0.231  Sum_probs=42.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+....+.+...+.. |..                  + ......++++.+||.+||..||.+|||+.
T Consensus       266 l~el~~~g~~pf~~~~~~~~~~~~~~~-~~~------------------~-~~~~~~~~~l~~li~~cl~~dp~~RPs~~  325 (338)
T cd05102         266 LWEIFSLGASPYPGVQINEEFCQRLKD-GTR------------------M-RAPENATPEIYRIMLACWQGDPKERPTFS  325 (338)
T ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHhc-CCC------------------C-CCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            478885 88888875543333333221 110                  0 01124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       326 el~~  329 (338)
T cd05102         326 ALVE  329 (338)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=97.23  E-value=0.00032  Score=57.98  Aligned_cols=29  Identities=21%  Similarity=0.395  Sum_probs=26.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+.++.+||.+||..||.+|||+.|+|+
T Consensus       219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         219 LCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             cCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            35788999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=97.23  E-value=0.00051  Score=57.54  Aligned_cols=62  Identities=19%  Similarity=0.189  Sum_probs=44.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+.+..+......+                     .....+..+.+||.+||..||++||++.
T Consensus       193 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~  251 (262)
T cd05071         193 LTELTTKGRVPYPGMVNREVLDQVERGYRMP---------------------CPPECPESLHDLMCQCWRKEPEERPTFE  251 (262)
T ss_pred             HHHHHcCCCCCCCCCChHHHHHHHhcCCCCC---------------------CccccCHHHHHHHHHHccCCcccCCCHH
Confidence            478888 888888776665555543311111                     0124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       252 ~~~~  255 (262)
T cd05071         252 YLQA  255 (262)
T ss_pred             HHHH
Confidence            8765

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=97.23  E-value=0.00049  Score=57.42  Aligned_cols=62  Identities=16%  Similarity=0.174  Sum_probs=44.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+....+......+                     .....+.++.+++.+||..||.+||++.
T Consensus       193 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  251 (260)
T cd05073         193 LMEIVTYGRIPYPGMSNPEVIRALERGYRMP---------------------RPENCPEELYNIMMRCWKNRPEERPTFE  251 (260)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHhCCCCCC---------------------CcccCCHHHHHHHHHHcccCcccCcCHH
Confidence            468887 888888877666555543311110                     1134678899999999999999999998


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      +++.
T Consensus       252 ~l~~  255 (260)
T cd05073         252 YIQS  255 (260)
T ss_pred             HHHH
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=97.22  E-value=0.00029  Score=58.95  Aligned_cols=30  Identities=17%  Similarity=0.200  Sum_probs=27.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..+..+.+||.+||..||++||++.+++++
T Consensus       232 ~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         232 DCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            467889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.22  E-value=0.00047  Score=66.86  Aligned_cols=33  Identities=33%  Similarity=0.497  Sum_probs=30.6

Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      +.+|.|||.+||.+||..||+|.++|.||||=.
T Consensus       740 d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~  772 (903)
T KOG1027|consen  740 DCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD  772 (903)
T ss_pred             hHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence            349999999999999999999999999999964

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=97.21  E-value=0.00036  Score=60.01  Aligned_cols=29  Identities=28%  Similarity=0.455  Sum_probs=26.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+.++.+||.+||..||++|||+.|+++
T Consensus       268 ~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         268 HAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            35789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=97.21  E-value=0.00051  Score=57.34  Aligned_cols=62  Identities=18%  Similarity=0.253  Sum_probs=43.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|...+..+.+..|... +.+                    ......+.++.+||.+||..||.+||++.
T Consensus       203 l~ellt~g~~p~~~~~~~~~~~~~~~~-~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  261 (269)
T cd05044         203 MWEILTLGQQPYPALNNQEVLQHVTAG-GRL--------------------QKPENCPDKIYQLMTNCWAQDPSERPTFD  261 (269)
T ss_pred             HHHHHHcCCCCCcccCHHHHHHHHhcC-Ccc--------------------CCcccchHHHHHHHHHHcCCCcccCCCHH
Confidence            468886 88888776665544443221 100                    01124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       262 ~i~~  265 (269)
T cd05044         262 RIQE  265 (269)
T ss_pred             HHHH
Confidence            9865

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=97.20  E-value=0.00054  Score=57.98  Aligned_cols=62  Identities=11%  Similarity=0.153  Sum_probs=43.4

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|...+..+.+..+..  +.+.                   .....+++.+.+||.+||..||.+|+++.
T Consensus       214 l~el~~~g~~p~~~~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~  272 (280)
T cd05092         214 LWEIFTYGKQPWYQLSNTEAIECITQ--GREL-------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIK  272 (280)
T ss_pred             HHHHHcCCCCCCccCCHHHHHHHHHc--CccC-------------------CCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            467776 7888876665555554433  1110                   01124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      +++.
T Consensus       273 ~l~~  276 (280)
T cd05092         273 DIHS  276 (280)
T ss_pred             HHHH
Confidence            9874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=97.20  E-value=0.00052  Score=58.42  Aligned_cols=62  Identities=15%  Similarity=0.151  Sum_probs=43.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|...+..+.+..+..  |..                   .......+.++.+||.+||..||.+|||+.
T Consensus       215 l~el~t~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  273 (291)
T cd05094         215 LWEIFTYGKQPWFQLSNTEVIECITQ--GRV-------------------LERPRVCPKEVYDIMLGCWQREPQQRLNIK  273 (291)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHhC--CCC-------------------CCCCccCCHHHHHHHHHHcccChhhCcCHH
Confidence            468887 8888877665554444322  111                   111123578899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       274 ~v~~  277 (291)
T cd05094         274 EIYK  277 (291)
T ss_pred             HHHH
Confidence            9865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=97.19  E-value=0.00054  Score=56.97  Aligned_cols=62  Identities=19%  Similarity=0.189  Sum_probs=42.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|...+..+....|..  +.+                  + ......+..+.+||.+||..||.+||++.
T Consensus       188 l~~~~~~g~~p~~~~~~~~~~~~~~~--~~~------------------~-~~~~~~~~~l~~li~~cl~~~p~~Rp~~~  246 (257)
T cd05060         188 LWEAFSYGAKPYGEMKGAEVIAMLES--GER------------------L-PRPEECPQEIYSIMLSCWKYRPEDRPTFS  246 (257)
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHHc--CCc------------------C-CCCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence            467886 8888876665444443322  110                  0 01124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       247 ~l~~  250 (257)
T cd05060         247 ELES  250 (257)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=97.19  E-value=0.0006  Score=56.52  Aligned_cols=63  Identities=19%  Similarity=0.245  Sum_probs=45.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ++||++ |+++|.+.+..+.+..+... +..    +              . .....+.++.+||.+||..+|++||++.
T Consensus       190 l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~----~--------------~-~~~~~~~~~~~li~~~l~~~p~~Rps~~  249 (257)
T cd05040         190 LWEMFTYGEEPWAGLSGSQILKKIDKE-GER----L--------------E-RPEACPQDIYNVMLQCWAHNPADRPTFA  249 (257)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhc-CCc----C--------------C-CCccCCHHHHHHHHHHCCCCcccCCCHH
Confidence            468887 88888877776666655431 110    0              0 0123568899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       250 ~~~~  253 (257)
T cd05040         250 ALRE  253 (257)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=97.18  E-value=0.00041  Score=59.64  Aligned_cols=63  Identities=21%  Similarity=0.222  Sum_probs=43.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+....+..  +..                  +. .....+.++.+||.+||..||++||++.
T Consensus       213 l~ellt~g~~p~~~~~~~~~~~~~~~--~~~------------------~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~  271 (303)
T cd05088         213 LWEIVSLGGTPYCGMTCAELYEKLPQ--GYR------------------LE-KPLNCDDEVYDLMRQCWREKPYERPSFA  271 (303)
T ss_pred             HHHHHhcCCCCcccCChHHHHHHHhc--CCc------------------CC-CCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            468887 8888877665544443321  100                  00 0113578899999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++|++
T Consensus       272 ~il~~  276 (303)
T cd05088         272 QILVS  276 (303)
T ss_pred             HHHHH
Confidence            99986

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.15  E-value=0.00019  Score=71.24  Aligned_cols=76  Identities=25%  Similarity=0.168  Sum_probs=62.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC---C
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP---T   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~---t   77 (216)
                      +||.+.|+.+|.|++..+.+..++...+.-++++|                   ...+++.|||.+||+-+|..|.   .
T Consensus       248 lyeFLVgcvpffGdtpeelfg~visd~i~wpE~de-------------------a~p~Ea~dli~~LL~qnp~~Rlgt~g  308 (1205)
T KOG0606|consen  248 LYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDE-------------------ALPPEAQDLIEQLLRQNPLCRLGTGG  308 (1205)
T ss_pred             HHHHheeeeeccCCCHHHHHhhhhhhhccccccCc-------------------CCCHHHHHHHHHHHHhChHhhcccch
Confidence            58999999999999999988888776554222232                   4678999999999999999998   4


Q ss_pred             HHHHHcCccccCCCCCCC
Q 042950           78 AAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~~~   95 (216)
                      +-++.+|+||..++|..+
T Consensus       309 a~evk~h~ff~~LDw~~l  326 (1205)
T KOG0606|consen  309 ALEVKQHGFFQLLDWKSL  326 (1205)
T ss_pred             hhhhhhccceeecccchh
Confidence            788999999999988744

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=97.15  E-value=0.00083  Score=56.31  Aligned_cols=62  Identities=19%  Similarity=0.313  Sum_probs=44.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|.+.+..+.+..+..  +...                   ......+.++.+||.+||..||++|+|+.
T Consensus       211 l~el~t~g~~p~~~~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  269 (277)
T cd05032         211 LWEMATLAEQPYQGLSNEEVLKFVID--GGHL-------------------DLPENCPDKLLELMRMCWQYNPKMRPTFL  269 (277)
T ss_pred             HHHhhccCCCCCccCCHHHHHHHHhc--CCCC-------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence            468887 8888887776555544431  2110                   01123578899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       270 ~l~~  273 (277)
T cd05032         270 EIVS  273 (277)
T ss_pred             HHHH
Confidence            9975

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=97.13  E-value=0.00043  Score=57.73  Aligned_cols=29  Identities=24%  Similarity=0.273  Sum_probs=25.7

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+.++.+||.+||..||.+|||+.++++
T Consensus       232 ~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         232 HYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             cccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence            36788999999999999999999997754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=97.12  E-value=0.00056  Score=58.11  Aligned_cols=29  Identities=31%  Similarity=0.421  Sum_probs=26.4

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+.++.+||.+||..||.+||++.++++
T Consensus       253 ~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         253 NCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            46789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=97.12  E-value=0.00041  Score=57.47  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=26.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+..+.+||.+||..||++|||+.++++
T Consensus       220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            35788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=97.11  E-value=0.00053  Score=60.24  Aligned_cols=30  Identities=20%  Similarity=0.277  Sum_probs=27.4

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..++++.+++.+||..+|++||++.++++|
T Consensus       300 ~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         300 YATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            357889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=97.10  E-value=0.00085  Score=56.85  Aligned_cols=29  Identities=24%  Similarity=0.246  Sum_probs=26.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+.++.+||.+||..||.+|||+.|+++
T Consensus       256 ~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         256 NCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            46788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>PLN00181 protein SPA1-RELATED; Provisional

Probab=97.10  E-value=0.0005  Score=67.47  Aligned_cols=33  Identities=24%  Similarity=0.263  Sum_probs=30.2

Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ..+..+++.+||..||.+||++.|+|+||||.+
T Consensus       238 ~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        238 WPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             CHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence            456789999999999999999999999999976

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=97.10  E-value=0.00064  Score=57.14  Aligned_cols=62  Identities=21%  Similarity=0.206  Sum_probs=42.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||++ |..+|.+.+..+.+..+....                    .+ +.....+.++.+||.+||..||.+|||+.
T Consensus       201 l~el~~~g~~pf~~~~~~~~~~~~~~~~--------------------~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~  259 (270)
T cd05047         201 LWEIVSLGGTPYCGMTCAELYEKLPQGY--------------------RL-EKPLNCDDEVYDLMRQCWREKPYERPSFA  259 (270)
T ss_pred             HHHHHcCCCCCccccCHHHHHHHHhCCC--------------------CC-CCCCcCCHHHHHHHHHHcccChhhCCCHH
Confidence            467775 777777666554444432210                    00 01123678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      +++.
T Consensus       260 ~il~  263 (270)
T cd05047         260 QILV  263 (270)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=97.10  E-value=0.00079  Score=57.11  Aligned_cols=29  Identities=28%  Similarity=0.250  Sum_probs=26.4

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+.++.+||.+||.+||.+|||+.++++
T Consensus       264 ~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         264 NCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             CCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            45789999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=97.07  E-value=0.0007  Score=56.29  Aligned_cols=30  Identities=10%  Similarity=0.190  Sum_probs=27.0

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+++.+.+||.+||..||++|+|+.++++
T Consensus       222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         222 DGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            346789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=97.06  E-value=0.00044  Score=61.73  Aligned_cols=28  Identities=21%  Similarity=0.396  Sum_probs=26.0

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      .++++.+||.+||..||.+|||+.++++
T Consensus       340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         340 APPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            5789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=97.06  E-value=0.00092  Score=56.11  Aligned_cols=62  Identities=10%  Similarity=0.042  Sum_probs=44.7

Q ss_pred             Ccccc-cCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELL-LFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELl-tG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ++||+ +|+++|.+.+..+.+..|......+                     ....++..+.+|+.+|+..||.+||++.
T Consensus       198 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~c~~~~p~~RP~~~  256 (266)
T cd05064         198 MWEVMSYGERPYWDMSGQDVIKAVEDGFRLP---------------------APRNCPNLLHQLMLDCWQKERGERPRFS  256 (266)
T ss_pred             HHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC---------------------CCCCCCHHHHHHHHHHcCCCchhCCCHH
Confidence            46755 4888888877766666554321111                     1124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       257 ~i~~  260 (266)
T cd05064         257 QIHS  260 (266)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=97.06  E-value=0.0011  Score=54.72  Aligned_cols=30  Identities=17%  Similarity=0.380  Sum_probs=27.0

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .++.++.+||.+||..||.+||++.++++.
T Consensus       218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  247 (250)
T cd05085         218 KCPDDVYKVMQRCWDYKPENRPKFSELQKE  247 (250)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            467899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.04  E-value=0.00032  Score=62.25  Aligned_cols=114  Identities=15%  Similarity=0.225  Sum_probs=72.5

Q ss_pred             CcccccCCCCCC--CC-----CHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQ--GT-----DEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~--g~-----s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      |+||+.|+.+|.  |.     +..|.|.+|+-  -    ..+.               +-..+|-.+..+|+..|..||.
T Consensus       441 mfemmagrspfdivgm~n~d~ntedylfqvil--e----kqir---------------iprslsvkas~vlkgflnkdp~  499 (593)
T KOG0695|consen  441 MFEMMAGRSPFDIVGMDNPDMNTEDYLFQVIL--E----KQIR---------------IPRSLSVKASHVLKGFLNKDPK  499 (593)
T ss_pred             HHHHHcCCCCcceecCCCcccchhHHHHHHHh--h----hccc---------------ccceeehhhHHHHHHhhcCCcH
Confidence            579999999995  32     33455555432  0    0110               1124667788999999999999


Q ss_pred             CCCC------HHHHHcCccccCCCCCCCCCCCCcc-ccchhhhhhhhhccccCCcCCCCCCCCCCCCHHHhhhccCchhh
Q 042950           74 KRPT------AAEALQHLFFKRCLYAPPHIRSVPA-VATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNS  146 (216)
Q Consensus        74 kR~t------a~eaL~HpfF~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~el~~~~q~~k~  146 (216)
                      +|+.      ..++-.|+||+.+.|...+.....+ +.+.+.+..            ...+-..+|+++-.++.+++...
T Consensus       500 erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d~------------~l~~fd~qft~e~~qltpdd~d~  567 (593)
T KOG0695|consen  500 ERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDDY------------GLDNFDTQFTSEPVQLTPDDEDA  567 (593)
T ss_pred             HhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCcccccc------------CccccccccccCCcccCCCCHHH
Confidence            9986      4789999999999998776666544 333322222            22233456677766666665333


Q ss_pred             h
Q 042950          147 V  147 (216)
Q Consensus       147 ~  147 (216)
                      +
T Consensus       568 i  568 (593)
T KOG0695|consen  568 I  568 (593)
T ss_pred             H
Confidence            3

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=97.02  E-value=0.001  Score=56.05  Aligned_cols=29  Identities=17%  Similarity=0.402  Sum_probs=26.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      .+++++.++|.+||..||++|||+.++++
T Consensus       243 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         243 NCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            35788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=96.99  E-value=0.00085  Score=55.68  Aligned_cols=29  Identities=21%  Similarity=0.400  Sum_probs=26.6

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..++++.+||.+||..||.+||++.+++.
T Consensus       223 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         223 GCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             CCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            46789999999999999999999999885

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=96.97  E-value=0.0011  Score=57.00  Aligned_cols=30  Identities=13%  Similarity=0.279  Sum_probs=27.4

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..+.++.+||.+||..||.+|||+.+++++
T Consensus       266 ~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         266 NCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             cCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=96.94  E-value=0.001  Score=55.46  Aligned_cols=29  Identities=21%  Similarity=0.355  Sum_probs=26.3

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .+.++.+||.+||..||++|||+.++++.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         228 KWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             CcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            45788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=96.94  E-value=0.0011  Score=55.12  Aligned_cols=29  Identities=21%  Similarity=0.209  Sum_probs=26.3

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .+..+.+|+.+||..||++||++.+++..
T Consensus       227 ~~~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         227 CPDPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            56789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=96.93  E-value=0.0012  Score=57.60  Aligned_cols=63  Identities=11%  Similarity=0.116  Sum_probs=43.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+.+..+.....                     .......+.++.+||.+||..+|.+||++.
T Consensus       226 l~el~~~g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~  284 (334)
T cd05100         226 LWEIFTLGGSPYPGIPVEELFKLLKEGHR---------------------MDKPANCTHELYMIMRECWHAVPSQRPTFK  284 (334)
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHH
Confidence            467776 7777777665554444422110                     011224678899999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++.+
T Consensus       285 ell~~  289 (334)
T cd05100         285 QLVED  289 (334)
T ss_pred             HHHHH
Confidence            99987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=96.93  E-value=0.0015  Score=56.32  Aligned_cols=29  Identities=17%  Similarity=0.285  Sum_probs=26.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      .++.++.+||.+||..||++|||+.++++
T Consensus       260 ~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         260 NCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            46788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=96.92  E-value=0.00097  Score=62.84  Aligned_cols=68  Identities=24%  Similarity=0.306  Sum_probs=48.4

Q ss_pred             cccccCCCCCCCCCHHHHHH-HHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            2 AELLLFRPLFQGTDEAEQMY-KICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         2 ~ELltG~plF~g~s~~dql~-~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      .||+|+.-|+.-..+.-||+ +++.  |..+.               .|.+   --++++.+||.+||.. ...|+||.|
T Consensus       234 LEMvT~eYPYsEC~n~AQIYKKV~S--GiKP~---------------sl~k---V~dPevr~fIekCl~~-~~~R~sa~e  292 (632)
T KOG0584|consen  234 LEMVTSEYPYSECTNPAQIYKKVTS--GIKPA---------------ALSK---VKDPEVREFIEKCLAT-KSERLSAKE  292 (632)
T ss_pred             HHHHhccCChhhhCCHHHHHHHHHc--CCCHH---------------Hhhc---cCCHHHHHHHHHHhcC-chhccCHHH
Confidence            47888887776544444444 3333  43222               1222   2479999999999999 999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|.|+||+..
T Consensus       293 LL~d~Ff~~d  302 (632)
T KOG0584|consen  293 LLKDPFFDED  302 (632)
T ss_pred             HhhChhhccc
Confidence            9999999974

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=96.91  E-value=0.00084  Score=59.90  Aligned_cols=29  Identities=31%  Similarity=0.450  Sum_probs=26.5

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .+.++.+||.+||..||++|||+.++++.
T Consensus       342 ~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         342 APSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            56789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=96.89  E-value=0.00043  Score=69.95  Aligned_cols=69  Identities=25%  Similarity=0.315  Sum_probs=50.0

Q ss_pred             cccccCCCCCCC-CCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            2 AELLLFRPLFQG-TDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         2 ~ELltG~plF~g-~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      .||.||+-|+.- +++-..++++-.  |.  ...+                 -..++.++.|||.+||+-||++|.++.|
T Consensus      1432 lEM~tGkrPW~~~dne~aIMy~V~~--gh--~Pq~-----------------P~~ls~~g~dFle~Cl~~dP~~Rw~~~q 1490 (1509)
T KOG4645|consen 1432 LEMATGKRPWAELDNEWAIMYHVAA--GH--KPQI-----------------PERLSSEGRDFLEHCLEQDPKMRWTASQ 1490 (1509)
T ss_pred             EEeecCCCchhhccchhHHHhHHhc--cC--CCCC-----------------chhhhHhHHHHHHHHHhcCchhhhHHHH
Confidence            599999999854 333344444422  21  1111                 1247899999999999999999999999


Q ss_pred             HHcCccccCCC
Q 042950           81 ALQHLFFKRCL   91 (216)
Q Consensus        81 aL~HpfF~~~~   91 (216)
                      +|.|.|-+.+.
T Consensus      1491 lle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1491 LLEHAFGKSCT 1501 (1509)
T ss_pred             HHHhhcccccc
Confidence            99999998753

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=96.88  E-value=0.0014  Score=54.77  Aligned_cols=63  Identities=22%  Similarity=0.296  Sum_probs=43.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+....+..  +..                  + ...+..+..+.+|+.+||..+|++|+++.
T Consensus       205 l~el~~~g~~p~~~~~~~~~~~~~~~--~~~------------------~-~~~~~~~~~~~~l~~~~l~~~p~~Rps~~  263 (273)
T cd05074         205 MWEIMTRGQTPYAGVENSEIYNYLIK--GNR------------------L-KQPPDCLEDVYELMCQCWSPEPKCRPSFQ  263 (273)
T ss_pred             HHHHhhCCCCCCCCCCHHHHHHHHHc--CCc------------------C-CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            467777 7788877665444444432  110                  0 01124678899999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       264 ~~~~~  268 (273)
T cd05074         264 HLRDQ  268 (273)
T ss_pred             HHHHH
Confidence            98864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=96.85  E-value=0.0019  Score=54.16  Aligned_cols=30  Identities=17%  Similarity=0.289  Sum_probs=27.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .++..+.++|.+||..||.+|+++.+++.+
T Consensus       243 ~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         243 GCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            467889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=96.84  E-value=0.0016  Score=53.95  Aligned_cols=62  Identities=19%  Similarity=0.163  Sum_probs=42.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ++||++ |+++|.+.+..+....+..  +..                  . .....++..+.+||.+||..+|.+||++.
T Consensus       187 l~el~~~g~~p~~~~~~~~~~~~~~~--~~~------------------~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  245 (254)
T cd05083         187 LWEVFSYGRAPYPKMSLKEVKECVEK--GYR------------------M-EPPEGCPADVYVLMTSCWETEPKKRPSFH  245 (254)
T ss_pred             HHHHHhCCCCCCccCCHHHHHHHHhC--CCC------------------C-CCCCcCCHHHHHHHHHHcCCChhhCcCHH
Confidence            467776 8888877665444333322  110                  0 01124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      +++.
T Consensus       246 ~l~~  249 (254)
T cd05083         246 KLRE  249 (254)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=96.83  E-value=0.0017  Score=54.97  Aligned_cols=29  Identities=24%  Similarity=0.504  Sum_probs=26.3

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .+.++.+||.+||..||++|||+.++|++
T Consensus       244 ~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         244 SCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             CChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            45788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=96.82  E-value=0.0018  Score=54.20  Aligned_cols=29  Identities=14%  Similarity=0.147  Sum_probs=26.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..++.+.+|+.+||..+|.+||++.++++
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         233 DCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             CCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            35788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=96.81  E-value=0.002  Score=53.97  Aligned_cols=63  Identities=13%  Similarity=0.069  Sum_probs=43.9

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |..+|.+.+..+.+..|......+.                     ....+.++.+|+.+||..||.+||++.
T Consensus       201 l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~  259 (269)
T cd05065         201 MWEVMSYGERPYWDMSNQDVINAIEQDYRLPP---------------------PMDCPTALHQLMLDCWQKDRNARPKFG  259 (269)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCC---------------------cccCCHHHHHHHHHHcCCChhhCcCHH
Confidence            467665 8888877666655555533211110                     124577889999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++..
T Consensus       260 ~i~~~  264 (269)
T cd05065         260 QIVST  264 (269)
T ss_pred             HHHHH
Confidence            98863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=96.77  E-value=0.0027  Score=54.10  Aligned_cols=29  Identities=21%  Similarity=0.165  Sum_probs=26.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+..+.+||.+||.+||.+||++.++++
T Consensus       263 ~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         263 LCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            35788999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=96.75  E-value=0.0021  Score=53.31  Aligned_cols=29  Identities=31%  Similarity=0.368  Sum_probs=26.0

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+.++.++|.+||..||.+|||+.++++
T Consensus       232 ~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         232 HYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             hcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            45778999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=96.74  E-value=0.0023  Score=53.88  Aligned_cols=29  Identities=17%  Similarity=0.133  Sum_probs=26.6

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+.++.+||.+||..||++||++.+++.
T Consensus       235 ~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         235 ICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            46788999999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=96.71  E-value=0.0024  Score=53.39  Aligned_cols=62  Identities=16%  Similarity=0.125  Sum_probs=42.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+.+..+..  |..                   .......++++.+||.+|+.+||++||+..
T Consensus       188 l~el~~~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~  246 (257)
T cd05115         188 MWEAFSYGQKPYKKMKGPEVMSFIEQ--GKR-------------------LDCPAECPPEMYALMKDCWIYKWEDRPNFA  246 (257)
T ss_pred             HHHHhcCCCCCcCcCCHHHHHHHHHC--CCC-------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            467775 7788876665554444432  110                   001134678999999999999999999998


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       247 ~i~~  250 (257)
T cd05115         247 KVEE  250 (257)
T ss_pred             HHHH
Confidence            8865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=96.70  E-value=0.0021  Score=55.46  Aligned_cols=30  Identities=17%  Similarity=0.145  Sum_probs=27.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..+.++.++|.+||..||.+||++.+++.+
T Consensus       235 ~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         235 ICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            356789999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=96.69  E-value=0.0027  Score=54.33  Aligned_cols=30  Identities=13%  Similarity=0.259  Sum_probs=27.6

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .++.++.+||.+||..+|.+|+|+.++++.
T Consensus       263 ~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         263 NCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             CCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=96.69  E-value=0.0019  Score=54.28  Aligned_cols=29  Identities=21%  Similarity=0.451  Sum_probs=26.4

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .+.++.+||.+||..||.+||+..++|++
T Consensus       232 ~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         232 SCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             ChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            45788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=96.69  E-value=0.0012  Score=57.87  Aligned_cols=29  Identities=21%  Similarity=0.382  Sum_probs=27.1

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .++++.+++.+||..||++|||+.++++|
T Consensus       307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         307 TTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            57789999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=96.56  E-value=0.004  Score=52.42  Aligned_cols=62  Identities=21%  Similarity=0.194  Sum_probs=41.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ++||++ |+.+|.+.+..+....+..  +..                  + ......+.++.++|.+||..||.+||++.
T Consensus       201 l~el~~~g~~p~~~~~~~~~~~~~~~--~~~------------------~-~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~  259 (279)
T cd05057         201 VWELMTFGAKPYEGIPAVEIPDLLEK--GER------------------L-PQPPICTIDVYMVLVKCWMIDAESRPTFK  259 (279)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHhC--CCC------------------C-CCCCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence            467777 8888877665444433332  110                  0 00123567899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       260 ~l~~  263 (279)
T cd05057         260 ELIN  263 (279)
T ss_pred             HHHH
Confidence            8764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=96.50  E-value=0.0013  Score=55.19  Aligned_cols=62  Identities=32%  Similarity=0.387  Sum_probs=42.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||++ |+.+|...+..+.+..+.+  +..                   ......++..+.+||..|+..||.+|||+.
T Consensus       195 l~ei~~~~~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~  253 (259)
T PF07714_consen  195 LYEILTLGKFPFSDYDNEEIIEKLKQ--GQR-------------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQ  253 (259)
T ss_dssp             HHHHHTTSSGTTTTSCHHHHHHHHHT--TEE-------------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HH
T ss_pred             cccccccccccccccccccccccccc--ccc-------------------ceeccchhHHHHHHHHHHcCCChhhCcCHH
Confidence            478999 6788887777666666633  211                   001124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       254 ~i~~  257 (259)
T PF07714_consen  254 EILQ  257 (259)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=96.43  E-value=0.0061  Score=52.14  Aligned_cols=28  Identities=18%  Similarity=0.205  Sum_probs=25.6

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHH
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEAL   82 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL   82 (216)
                      .++..+.+||.+||..||.+|||+.++.
T Consensus       272 ~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         272 PCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             CCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            4678899999999999999999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=96.43  E-value=0.006  Score=51.96  Aligned_cols=29  Identities=17%  Similarity=0.154  Sum_probs=25.9

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      .++..+.+||.+||..||.+||++.++++
T Consensus       264 ~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         264 LCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            35688999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=96.43  E-value=0.006  Score=50.99  Aligned_cols=66  Identities=18%  Similarity=0.168  Sum_probs=42.7

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|....+.+.+..++.......                ....+....+....+++..|+ .||++|||++
T Consensus       199 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~  261 (269)
T cd05042         199 MWELFTAADQPYPDLSDEQVLKQVVREQDIKL----------------PKPQLDLKYSDRWYEVMQFCW-LDPETRPTAE  261 (269)
T ss_pred             HHHHHhCCCCCCCcCCHHHHHHHHhhccCccC----------------CCCcccccCCHHHHHHHHHHh-cCcccccCHH
Confidence            468887 7778877766666665544221100                001112246778888888887 5999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       262 ~v~~  265 (269)
T cd05042         262 EVHE  265 (269)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=96.40  E-value=0.0045  Score=52.38  Aligned_cols=29  Identities=21%  Similarity=0.159  Sum_probs=25.9

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .+.+..+++.+|+..||++|||+.|+++.
T Consensus       236 ~~~~~~~li~~c~~~~p~~Rps~~el~~~  264 (279)
T cd05111         236 CTIDVYMVMVKCWMIDENVRPTFKELANE  264 (279)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            46788999999999999999999998773

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PHA02882 putative serine/threonine kinase; Provisional

Probab=96.35  E-value=0.005  Score=52.69  Aligned_cols=67  Identities=10%  Similarity=0.124  Sum_probs=43.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHH--hhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICS--VLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~--ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta   78 (216)
                      |+||++|++||.+.+....+....+  .+.......                ..++..+.++.++++.|+.+||.+||+.
T Consensus       223 l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~rp~~  286 (294)
T PHA02882        223 MLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK----------------IKIKNANKFIYDFIECVTKLSYEEKPDY  286 (294)
T ss_pred             HHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhh----------------hccCCCCHHHHHHHHHHHhCCCCCCCCH
Confidence            5799999999987643222222211  111000000                0123467889999999999999999999


Q ss_pred             HHHHc
Q 042950           79 AEALQ   83 (216)
Q Consensus        79 ~eaL~   83 (216)
                      .++++
T Consensus       287 ~~l~~  291 (294)
T PHA02882        287 DALIK  291 (294)
T ss_pred             HHHHH
Confidence            99875

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=96.34  E-value=0.0075  Score=50.47  Aligned_cols=27  Identities=22%  Similarity=0.263  Sum_probs=23.5

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      .+..+.+++..|+ .||.+|||+.+++.
T Consensus       239 ~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         239 LSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             CChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            5678899999987 69999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=96.34  E-value=0.0053  Score=51.40  Aligned_cols=28  Identities=18%  Similarity=0.363  Sum_probs=25.7

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      .+.++.+|+.+||..||.+|||+.|+++
T Consensus       251 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         251 CPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             CCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            5678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.26  E-value=0.0025  Score=60.17  Aligned_cols=87  Identities=26%  Similarity=0.261  Sum_probs=64.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHH-hhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICS-VLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT--   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~-ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t--   77 (216)
                      ++||++|..+|.+    +.+..|.+ .++.|                       ..++.++.+|+..|+..+|.+|+.  
T Consensus       181 ~felltg~~pf~~----~~~~~Il~~~~~~p-----------------------~~l~~~a~~~~~~l~~r~p~nrLg~~  233 (612)
T KOG0603|consen  181 AFELLTGTLPFGG----DTMKRILKAELEMP-----------------------RELSAEARSLFRQLFKRNPENRLGAG  233 (612)
T ss_pred             HHHHhhCCCCCch----HHHHHHhhhccCCc-----------------------hhhhHHHHHHHHHHHhhCHHHHhccC
Confidence            4799999999987    67777766 33322                       135678999999999999999996  


Q ss_pred             ---HHHHHcCccccCCCCCCCCCCCCcc-ccchhhhhhhhh
Q 042950           78 ---AAEALQHLFFKRCLYAPPHIRSVPA-VATTTRGMLKQQ  114 (216)
Q Consensus        78 ---a~eaL~HpfF~~~~~~~~~~~~~~~-~~~~~~~~~~~~  114 (216)
                         +.|+++|+||..+.|.....+...+ +.+......+..
T Consensus       234 ~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~  274 (612)
T KOG0603|consen  234 PDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVA  274 (612)
T ss_pred             cchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhh
Confidence               5899999999999998766665554 444444433333

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.21  E-value=0.0019  Score=61.70  Aligned_cols=37  Identities=19%  Similarity=0.252  Sum_probs=33.6

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~   91 (216)
                      .+..+...+|.+||.+||.+|+|+++||+.+||+++.
T Consensus       556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  556 LLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             hchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            4667889999999999999999999999999999854

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=96.18  E-value=0.0075  Score=50.99  Aligned_cols=31  Identities=19%  Similarity=0.443  Sum_probs=28.0

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..++.++.+||.+||..||.+|||+.+++++
T Consensus       249 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         249 PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             CCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            3478899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=96.14  E-value=0.0048  Score=56.17  Aligned_cols=65  Identities=23%  Similarity=0.330  Sum_probs=50.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||-|+.|..+|.|.+....+.+|-.  |.--                     -+....++.-||+.||..||++|.|+.+
T Consensus       243 LYtLVyGtMPFDG~Dhk~lvrQIs~--GaYr---------------------EP~~PSdA~gLIRwmLmVNP~RRATieD  299 (668)
T KOG0611|consen  243 LYTLVYGTMPFDGRDHKRLVRQISR--GAYR---------------------EPETPSDASGLIRWMLMVNPERRATIED  299 (668)
T ss_pred             HHHHhhcccccCCchHHHHHHHhhc--cccc---------------------CCCCCchHHHHHHHHHhcCcccchhHHH
Confidence            4677788888888887777776644  3210                     1234678899999999999999999999


Q ss_pred             HHcCcccc
Q 042950           81 ALQHLFFK   88 (216)
Q Consensus        81 aL~HpfF~   88 (216)
                      +-.|=|.+
T Consensus       300 iAsHWWvN  307 (668)
T KOG0611|consen  300 IASHWWVN  307 (668)
T ss_pred             Hhhhheee
Confidence            99997765

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=96.02  E-value=0.014  Score=48.92  Aligned_cols=28  Identities=25%  Similarity=0.236  Sum_probs=24.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..++.+.++|..|+ .||.+||++.++++
T Consensus       237 ~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         237 PYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             CCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            36788899999988 78999999999865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=95.99  E-value=0.0062  Score=55.20  Aligned_cols=30  Identities=13%  Similarity=0.133  Sum_probs=27.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .++.++.+||.+|+..||.+||++.+++..
T Consensus       366 ~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         366 HASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            467899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=95.92  E-value=0.013  Score=50.22  Aligned_cols=30  Identities=17%  Similarity=0.111  Sum_probs=26.9

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..+.++.+||.+|+..||++||++.++++.
T Consensus       235 ~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         235 ICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            356789999999999999999999998874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=95.88  E-value=0.008  Score=54.44  Aligned_cols=29  Identities=17%  Similarity=0.311  Sum_probs=26.0

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      .++.++.+||.+||..||++||++.++.+
T Consensus       364 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         364 HATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             cCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            46788999999999999999999888765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=95.86  E-value=0.0089  Score=52.08  Aligned_cols=64  Identities=23%  Similarity=0.229  Sum_probs=46.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||+..++||.|++-...-.+|...--+|.+..                    ..|.++..||..|+..||+.||+.  
T Consensus       218 lyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~--------------------~YS~~l~~li~~ci~vd~~~RP~t--  275 (375)
T KOG0591|consen  218 LYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDE--------------------HYSTDLRELINMCIAVDPEQRPDT--  275 (375)
T ss_pred             HHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHH--------------------HhhhHHHHHHHHHccCCcccCCCc--
Confidence            5899999999999966665566655311112211                    257899999999999999999986  


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                         ||++.+
T Consensus       276 ---~~~v~d  281 (375)
T KOG0591|consen  276 ---VPYVQD  281 (375)
T ss_pred             ---chHHHH
Confidence               566654

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=95.67  E-value=0.0047  Score=58.15  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=33.6

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~   91 (216)
                      ++.++.+||+++|+.||.+|.++++++.|.|.....
T Consensus       278 ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~  313 (596)
T KOG0586|consen  278 MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLL  313 (596)
T ss_pred             eechhHHHHHHhhccCccccCCHHHhhhhcccchhh
Confidence            789999999999999999999999999999998643

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=95.56  E-value=0.018  Score=48.50  Aligned_cols=29  Identities=17%  Similarity=0.339  Sum_probs=26.7

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      .++.++.+||.+||..||++|||+.++++
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         250 GCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            46789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=95.41  E-value=0.019  Score=48.37  Aligned_cols=29  Identities=14%  Similarity=0.183  Sum_probs=26.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+.++.+||.+||..||++|||+.++++
T Consensus       248 ~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         248 NCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            46789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=95.32  E-value=0.0071  Score=56.72  Aligned_cols=36  Identities=28%  Similarity=0.378  Sum_probs=34.0

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .++++++|||..+|+..=.+|.|...+|.|+|++++
T Consensus       790 eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  790 EISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             hcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence            478999999999999999999999999999999974

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=95.20  E-value=0.024  Score=46.67  Aligned_cols=27  Identities=33%  Similarity=0.581  Sum_probs=24.9

Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..++.+||.+||..||.+|||+.++++
T Consensus       230 ~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         230 CAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             chHHHHHHHHHhccChhhCCCHHHHHH
Confidence            378899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=95.04  E-value=0.063  Score=54.57  Aligned_cols=34  Identities=38%  Similarity=0.513  Sum_probs=30.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCcccc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFK   88 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~   88 (216)
                      ..-+....+|+.||.-||.+||||.|+|++.||-
T Consensus       842 ~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  842 PEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             ccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            3445667999999999999999999999999997

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=94.68  E-value=0.02  Score=57.28  Aligned_cols=66  Identities=12%  Similarity=0.159  Sum_probs=43.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+....  ..+..|..  +              . ....+++.+.+++.+||..||++|+++.+
T Consensus       221 LyELLTG~~PF~~~~~~ki~~~--~~i~~P~~--~--------------~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~e  281 (932)
T PRK13184        221 LYQMLTLSFPYRRKKGRKISYR--DVILSPIE--V--------------A-PYREIPPFLSQIAMKALAVDPAERYSSVQ  281 (932)
T ss_pred             HHHHHHCCCCCCCcchhhhhhh--hhccChhh--c--------------c-ccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            5789999999987554333222  11111110  0              0 01346788999999999999999998877


Q ss_pred             HHcCc
Q 042950           81 ALQHL   85 (216)
Q Consensus        81 aL~Hp   85 (216)
                      +|.+.
T Consensus       282 eLl~~  286 (932)
T PRK13184        282 ELKQD  286 (932)
T ss_pred             HHHHH
Confidence            77653

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.66  E-value=0.045  Score=52.18  Aligned_cols=34  Identities=35%  Similarity=0.384  Sum_probs=31.6

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      -+..+.+||..||+.-|.+|||++++|.|+|...
T Consensus       250 WS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R  283 (948)
T KOG0577|consen  250 WSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR  283 (948)
T ss_pred             hHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence            3678899999999999999999999999999975

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=94.62  E-value=0.04  Score=47.81  Aligned_cols=78  Identities=14%  Similarity=0.153  Sum_probs=57.8

Q ss_pred             CcccccCCCCCCCC-CHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGT-DEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~-s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |||+.||.-++.+- +-.+||..++.  |.|+.-..+              .---+.+..++.||.-||..|=..||+-.
T Consensus       259 L~EvAtG~fPyr~w~svfeql~~Vv~--gdpp~l~~~--------------~~~~~~s~~~~~fintCl~Kd~~~Rpky~  322 (361)
T KOG1006|consen  259 LYEVATGNFPYRKWDSVFEQLCQVVI--GDPPILLFD--------------KECVHYSFSMVRFINTCLIKDRSDRPKYD  322 (361)
T ss_pred             EeeeecCCCCcchHHHHHHHHHHHHc--CCCCeecCc--------------ccccccCHHHHHHHHHHhhcccccCcchh
Confidence            68999999998874 44577777743  765432211              00013678899999999999999999999


Q ss_pred             HHHcCccccCCCCCC
Q 042950           80 EALQHLFFKRCLYAP   94 (216)
Q Consensus        80 eaL~HpfF~~~~~~~   94 (216)
                      +++.++|+.......
T Consensus       323 ~Lk~~~fyr~y~~~~  337 (361)
T KOG1006|consen  323 DLKKFPFYRMYAVEG  337 (361)
T ss_pred             hhhcCchhhhhhhcC
Confidence            999999998754333

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=94.62  E-value=0.075  Score=47.84  Aligned_cols=62  Identities=21%  Similarity=0.236  Sum_probs=46.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCC-CCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMP-SASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||++|+.||.+.+.......++.-.-.|.                     ++ ...+.+..||..|..-||.+||+-.
T Consensus       236 lWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~---------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~  294 (362)
T KOG0192|consen  236 LWELLTGEIPFEDLAPVQVASAVVVGGLRPP---------------------IPKECPPHLSSLMERCWLVDPSRRPSFL  294 (362)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC---------------------CCccCCHHHHHHHHHhCCCCCCcCCCHH
Confidence            5799999999999887555555543222221                     22 2778899999999999999999987


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      +++.
T Consensus       295 ei~~  298 (362)
T KOG0192|consen  295 EIVS  298 (362)
T ss_pred             HHHH
Confidence            7654

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=93.85  E-value=0.051  Score=53.50  Aligned_cols=67  Identities=21%  Similarity=0.187  Sum_probs=47.9

Q ss_pred             ccccCCCCCCCCCHHHHHHHHHHhhCCCCHH-HHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHHH
Q 042950            3 ELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-SWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEA   81 (216)
Q Consensus         3 ELltG~plF~g~s~~dql~~I~~ilG~p~~~-~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~ea   81 (216)
                      ||--|.|+|......-.|.+|..  .+|+.- .|                  .+-+.++.|||..||..|-.+||+..++
T Consensus       220 EladG~PPl~DmHPmraLF~IpR--NPPPkLkrp------------------~kWs~~FndFIs~cL~Kd~e~RP~~~~l  279 (953)
T KOG0587|consen  220 EMAEGAPPLCDMHPMRALFLIPR--NPPPKLKRP------------------KKWSKKFNDFISTCLVKDYEQRPSTEEL  279 (953)
T ss_pred             hhcCCCCCccCcchhhhhccCCC--CCCccccch------------------hhHHHHHHHHHHHHHhhccccCcchhhh
Confidence            67777877776665555554422  222111 01                  1236789999999999999999999999


Q ss_pred             HcCccccC
Q 042950           82 LQHLFFKR   89 (216)
Q Consensus        82 L~HpfF~~   89 (216)
                      |.|||..+
T Consensus       280 l~hpFi~e  287 (953)
T KOG0587|consen  280 LKHPFITE  287 (953)
T ss_pred             ccCCcccc
Confidence            99999995

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=93.81  E-value=0.036  Score=55.99  Aligned_cols=28  Identities=39%  Similarity=0.440  Sum_probs=25.7

Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      +....+||..|+..||++|++|++.|+-
T Consensus       264 d~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  264 DVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             CccHHHHHHHHHccCchhccCHHHHHHh
Confidence            4577899999999999999999999986

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=93.42  E-value=0.071  Score=53.61  Aligned_cols=82  Identities=22%  Similarity=0.261  Sum_probs=62.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH-
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA-   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~-   79 (216)
                      ++|.++|.++|........+..|+..  .                 .+|...-...+.++.+++..+|.-+|.+|+.+. 
T Consensus      1025 l~e~l~g~pp~na~tpq~~f~ni~~~--~-----------------~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~ 1085 (1205)
T KOG0606|consen 1025 LFEVLTGIPPFNAETPQQIFENILNR--D-----------------IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKG 1085 (1205)
T ss_pred             hhhhhcCCCCCCCcchhhhhhccccC--C-----------------CCCCCCccccChhhhhhhhhhhccCchhccCccc
Confidence            46888888888877766666655441  1                 223333445789999999999999999999877 


Q ss_pred             --HHHcCccccCCCCCCCCCCCCc
Q 042950           80 --EALQHLFFKRCLYAPPHIRSVP  101 (216)
Q Consensus        80 --eaL~HpfF~~~~~~~~~~~~~~  101 (216)
                        ++-.|+||+...|....+....
T Consensus      1086 ~~e~k~~~~~~~~~~~~l~~q~~~ 1109 (1205)
T KOG0606|consen 1086 AAEVKGHPFFQDVDWENLALQKAE 1109 (1205)
T ss_pred             ccccccCCccCCCCccccccccCc
Confidence              9999999999999877655443

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=93.10  E-value=0.077  Score=48.12  Aligned_cols=71  Identities=23%  Similarity=0.299  Sum_probs=53.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCC-CCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMP-SASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+++|...+..+.+..|-+  |.-.                  -..++ ..+....+|+..+|+.|+..|.+..
T Consensus       204 lyq~l~g~~Pf~a~t~~eL~~~~~k--~~~~------------------~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~  263 (429)
T KOG0595|consen  204 LYQCLTGKPPFDAETPKELLLYIKK--GNEI------------------VPVLPAELSNPLRELLISLLQRNPKDRISFE  263 (429)
T ss_pred             HHHHHhCCCCccccCHHHHHHHHhc--cccc------------------cCchhhhccCchhhhhhHHHhcCccccCchH
Confidence            5899999999999888887775533  2211                  11111 2566777999999999999999999


Q ss_pred             HHHcCccccCCC
Q 042950           80 EALQHLFFKRCL   91 (216)
Q Consensus        80 eaL~HpfF~~~~   91 (216)
                      +-+.|++.....
T Consensus       264 ~~~~~~~l~~~p  275 (429)
T KOG0595|consen  264 DFFDHPFLAANP  275 (429)
T ss_pred             HhhhhhhcccCc
Confidence            999999998743

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=93.02  E-value=0.078  Score=49.03  Aligned_cols=35  Identities=11%  Similarity=0.099  Sum_probs=33.1

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++.++.+||++||.|.-+.|+...++-+||||..
T Consensus       712 vVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  712 VVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             ccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence            48999999999999999999999999999999974

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=92.89  E-value=0.08  Score=45.43  Aligned_cols=29  Identities=38%  Similarity=0.484  Sum_probs=27.1

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .++.+.+||++||+.||.+||++.+++.+
T Consensus       268 yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  268 YSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            78899999999999999999999999875

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=92.24  E-value=0.09  Score=52.56  Aligned_cols=27  Identities=30%  Similarity=0.452  Sum_probs=24.2

Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           58 KDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        58 ~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .++.+++.+|+..||++|||+.|+++.
T Consensus       921 ~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        921 VEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            356899999999999999999999875

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=91.90  E-value=0.06  Score=51.11  Aligned_cols=65  Identities=20%  Similarity=0.246  Sum_probs=45.0

Q ss_pred             CcccccCCCCCCCCCHHHHH-HHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQM-YKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql-~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++|.-+|.+ ...||| .++-.-.+.|                 .+..+..++..++.+|+..|+.+++++||.-.
T Consensus       583 ~YELltg~lPysi-~~~dqIifmVGrG~l~p-----------------d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~  644 (678)
T KOG0193|consen  583 WYELLTGELPYSI-QNRDQIIFMVGRGYLMP-----------------DLSKIRSNCPKAMKRLLSDCWKFDREERPLFP  644 (678)
T ss_pred             HHHHHhCcCCcCC-CChhheEEEecccccCc-----------------cchhhhccCHHHHHHHHHHHHhcCcccCccHH
Confidence            5899999999984 444544 3332211122                 22223345677999999999999999999988


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++|.
T Consensus       645 ~il~  648 (678)
T KOG0193|consen  645 QLLS  648 (678)
T ss_pred             HHHH
Confidence            8876

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=91.51  E-value=0.17  Score=39.19  Aligned_cols=28  Identities=43%  Similarity=0.647  Sum_probs=25.8

Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHHcCc
Q 042950           58 KDAINLIESLCSWDPCKRPTAAEALQHL   85 (216)
Q Consensus        58 ~~~~dLL~~mL~~dP~kR~ta~eaL~Hp   85 (216)
                      ..+.++|.+||..||.+|+++.++++|+
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            5778999999999999999999999874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=90.56  E-value=0.49  Score=43.93  Aligned_cols=60  Identities=22%  Similarity=0.228  Sum_probs=46.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||+| |+.++++.+..+.+..|-+----|-                     -..++++..+++..|...+|++|||-+
T Consensus       394 L~E~fT~G~~py~~msn~ev~~~le~GyRlp~---------------------P~~CP~~vY~lM~~CW~~~P~~RPtF~  452 (468)
T KOG0197|consen  394 LWELFTYGRVPYPGMSNEEVLELLERGYRLPR---------------------PEGCPDEVYELMKSCWHEDPEDRPTFE  452 (468)
T ss_pred             HHHHhccCCCCCCCCCHHHHHHHHhccCcCCC---------------------CCCCCHHHHHHHHHHhhCCcccCCCHH
Confidence            578888 8888899999999988866211111                     124788999999999999999999977


Q ss_pred             HH
Q 042950           80 EA   81 (216)
Q Consensus        80 ea   81 (216)
                      .+
T Consensus       453 ~L  454 (468)
T KOG0197|consen  453 TL  454 (468)
T ss_pred             HH
Confidence            44

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=90.32  E-value=0.076  Score=51.75  Aligned_cols=33  Identities=27%  Similarity=0.499  Sum_probs=29.4

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcCcc
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQHLF   86 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~Hpf   86 (216)
                      +..+..+.+||..||+.||.+||++-+++.+-+
T Consensus       277 p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~  309 (738)
T KOG1989|consen  277 PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF  309 (738)
T ss_pred             ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence            467889999999999999999999999988644

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=86.85  E-value=0.45  Score=46.01  Aligned_cols=33  Identities=36%  Similarity=0.473  Sum_probs=30.7

Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ++.+-+|++..|..+|++|+|++-+|+|||...
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence            567889999999999999999999999999975

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=86.09  E-value=1.3  Score=43.53  Aligned_cols=60  Identities=17%  Similarity=0.218  Sum_probs=46.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |.|+++ |+.|+.|-++.+.|+.|.+  |..    |               ..-.++..+..+|+..|..-+|++||+..
T Consensus       695 LWEIFsyG~QPy~glSn~EVIe~i~~--g~l----L---------------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~  753 (774)
T KOG1026|consen  695 LWEIFSYGKQPYYGLSNQEVIECIRA--GQL----L---------------SCPENCPTEVYSLMLECWNENPKRRPSFK  753 (774)
T ss_pred             hhhhhccccCcccccchHHHHHHHHc--CCc----c---------------cCCCCCCHHHHHHHHHHhhcCcccCCCHH
Confidence            457776 8888889999898888865  321    1               01135788999999999999999999988


Q ss_pred             HH
Q 042950           80 EA   81 (216)
Q Consensus        80 ea   81 (216)
                      |+
T Consensus       754 eI  755 (774)
T KOG1026|consen  754 EI  755 (774)
T ss_pred             HH
Confidence            75

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=82.99  E-value=1.6  Score=42.81  Aligned_cols=63  Identities=17%  Similarity=0.263  Sum_probs=46.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+|||+ |.-++.|....+.|.+|-+  |.                  .|. .-+.++++..++++.|...+|.+|+|-.
T Consensus       305 iWEMFtyGEePW~G~~g~qIL~~iD~--~e------------------rLp-RPk~csedIY~imk~cWah~paDRptFs  363 (1039)
T KOG0199|consen  305 IWEMFTYGEEPWVGCRGIQILKNIDA--GE------------------RLP-RPKYCSEDIYQIMKNCWAHNPADRPTFS  363 (1039)
T ss_pred             HHhhhccCCCCCCCCCHHHHHHhccc--cc------------------cCC-CCCCChHHHHHHHHHhccCCccccccHH
Confidence            578888 6788889888888877742  21                  011 1124788999999999999999999977


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      .+...
T Consensus       364 air~~  368 (1039)
T KOG0199|consen  364 AIRED  368 (1039)
T ss_pred             HHHHh
Confidence            66433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	216
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		9e-09
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-07
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		3e-07
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		3e-07
4exu_A	371	Mapk13, Inactive Form Length = 371		4e-07
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-07
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		5e-07
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-07
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		5e-07
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-07
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		6e-07
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		6e-07
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		6e-07
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		6e-07
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-07
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		6e-07
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-07
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		6e-07
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		6e-07
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-07
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		7e-07
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		7e-07
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		7e-07
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		7e-07
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-07
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		7e-07
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-07
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-07
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-07
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		7e-07
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-07
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		7e-07
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		7e-07
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		7e-07
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-07
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-07
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		8e-07
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		8e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		8e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		8e-07
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		1e-06
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-06
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-06
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-06
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-06
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-06
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-06
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-06
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-06
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-06
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-06
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		3e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		3e-06
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		3e-06
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-06
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		3e-06
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		3e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-06
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		3e-06
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-06
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-06
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-06
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-06
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-06
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		3e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-06
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		3e-06
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		3e-06
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		3e-06
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-06
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-06
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-06
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-06
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-06
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-06
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		3e-06
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-06
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		3e-06
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-06
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		3e-06
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-06
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-06
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-06
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		3e-06
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-06
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-06
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-06
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-06
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-06
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-06
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-06
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		3e-06
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		3e-06
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-06
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-06
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-06
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-06
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-06
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-06
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-06
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		4e-06
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		4e-06
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-06
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		7e-06
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		8e-06
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-05
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-05
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-05
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-05
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-05
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-05
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-05
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		4e-05
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		4e-05
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-05
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-05
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		4e-05
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-05
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-05
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-05
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		6e-05
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		6e-05
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		6e-05
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		6e-05
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		6e-05
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		6e-05
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		7e-05
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		7e-05
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		7e-05
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		7e-05
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		7e-05
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		7e-05
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		7e-05
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		7e-05
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		7e-05
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		7e-05
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		7e-05
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		7e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		7e-05
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		7e-05
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		7e-05
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		8e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		8e-05
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		8e-05
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		8e-05
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		8e-05
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		8e-05
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		8e-05
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		8e-05
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		9e-05
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		9e-05
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		9e-05
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		9e-05
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		9e-05
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-05
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		9e-05
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		9e-05
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		9e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		9e-05
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-04
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		2e-04
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-04
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		4e-04
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		4e-04
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		5e-04
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		5e-04
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		5e-04
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		5e-04
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		5e-04
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		5e-04
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		5e-04
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		5e-04
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		5e-04
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		5e-04
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		5e-04
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		5e-04
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		6e-04
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		6e-04
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		7e-04
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		7e-04
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		8e-04
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		8e-04
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		8e-04

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW------ADELRQAMLSGVNLSELMP 54
           +AELLL  P   G  + +Q+ +I   LG PT + W       D +      G+ L  +  
Sbjct: 203 LAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFS 262
Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +A  D ++LI+ L  ++PC R TA +AL+  +F
Sbjct: 263 AAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDS--------WADELRQA--MLSGVNLS 50
           +AEL L RP+F G D   Q+  I  ++G P  D+         A E  ++  M     L 
Sbjct: 213 LAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272
Query: 51  ELMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
           ++ P  +   I+L++ +  +DP KR TA EAL+H
Sbjct: 273 KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDS--------WADELRQA--MLSGVNLS 50
           +AEL L RP+F G D   Q+  I  ++G P  D+         A E  ++  M     L 
Sbjct: 213 LAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272
Query: 51  ELMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
           ++ P  +   I+L++ +  +DP KR TA EAL+H
Sbjct: 273 KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDS--------WADELRQA--MLSGVNLS 50
           +AEL L RP+F G D   Q+  I  ++G P  D+         A E  ++  M     L 
Sbjct: 213 LAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272
Query: 51  ELMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
           ++ P  +   I+L++ +  +DP KR TA EAL+H
Sbjct: 273 KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD---SWADELRQAMLSGV------NLSE 51
           MAE+L  + LF+G D  +Q+ +I  V G P  +      D+  ++ +  +      + ++
Sbjct: 232 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ 291
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           L P AS  A +L+E +   D  KR TAA+AL H FF+
Sbjct: 292 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD---SWADELRQAMLSGV------NLSE 51
           MAE+L  + LF+G D  +Q+ +I  V G P  +      D+  ++ +  +      + ++
Sbjct: 214 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ 273
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           L P AS  A +L+E +   D  KR TAA+AL H FF+
Sbjct: 274 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 201 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 260
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 261 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 305

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDS----WADELRQAM-----LSGVNLSE 51
           MAE++  + LF+G+D  +Q+ +I  V G P  +      +DE +  M     L   + + 
Sbjct: 216 MAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS 275
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           ++ +AS  A+NL+E +   D  +R TA EAL H +F+
Sbjct: 276 ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 257 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 196 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 255
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 256 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 198 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 257
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 258 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 302

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 201 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 260
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 261 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 305

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W       + + +    +  + S+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 257 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 198 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 257
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 258 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 302

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 257 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 196 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 255
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 256 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 196 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 255
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 256 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 257 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 255 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 255 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W       + + +    +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W       + + +    +  + S+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 255 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W       + + +    +  + S+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 257 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W       + + +    +  + S+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 197 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 256
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 257 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELMP 54
             EL+L +PLF G    +Q+ +I  ++G PT      M+    E+R   L   +  +++P
Sbjct: 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291
Query: 55  SASKD-AINLIESLCSWDPCKRPTAAEALQHLFF 87
             +   AI+L+E +  ++P  R    EA+ H FF
Sbjct: 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 255 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 196 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 255
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 256 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--ADEL---RQAMLSGVN---LSEL 52
            AE++  +PLF G  + +Q+ KI S+LG P    W    EL   +Q           S +
Sbjct: 210 FAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSI 269
Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +P   ++ I+L+ ++  +DP KR +A +A+ H +FK
Sbjct: 270 IPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--ADEL---RQAMLSGVN---LSEL 52
            AE++  +PLF G  + +Q+ KI S+LG P    W    EL   +Q           S +
Sbjct: 210 FAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSI 269
Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +P   ++ I+L+ ++  +DP KR +A +A+ H +FK
Sbjct: 270 IPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT-----------MDSWADELRQAMLSGVNL 49
           MAEL+  +PLF G    +Q+ +I  VLG P+           M+    ++R    S V  
Sbjct: 232 MAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKV-- 289
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
               P    DAI+LI  L  + P  R TA EAL H FF
Sbjct: 290 --FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 232 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 291
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 292 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 292
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 293 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 292
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 293 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 268
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 269 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 268
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 269 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 268
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 269 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 278
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 279 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 272
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 273 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 223 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 282
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 283 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP--------TMDSWADELRQ-AMLSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P        + +S  + ++  A +  +N + 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN 272
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 273 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 224 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 281
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 282 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 272
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 273 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 290
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 291 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 236 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 293
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 294 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 232 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 289
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 290 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 224 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 281
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 282 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 211 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 268
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 269 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 266
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 267 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 210 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 267
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 268 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 272
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 273 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W       + + +    +  + S+++
Sbjct: 195 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 254
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHI 97
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+
Sbjct: 255 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 275
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 276 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 276
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 277 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 272
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 273 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHI 97
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+
Sbjct: 253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 210 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 267
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 268 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 277
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 278 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 277
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 278 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 282
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 283 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 276
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 277 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W       + + +    +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHI 97
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 282
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 283 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 275
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 276 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 282
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 283 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 277
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 278 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 276
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 277 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 236 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 293
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 294 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 272
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 273 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 277
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 278 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 275
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 276 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 275
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 276 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 212 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 269
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 270 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------SWADELRQAMLSGVNL 49
           MAELL  R LF GTD  +Q+  I  ++G P  +           ++   L Q  +  +N 
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNF 270
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
           + +   A+  A++L+E +   D  KR TAA+AL H +F
Sbjct: 271 ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--ADELRQ-----AMLSGVNLSELM 53
            AE++   PLF G  EA+Q+ +I  +LG P   +W    EL +      +   +     +
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
               +  I+L+  +   DP +R TA +AL+H +FK
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--ADELRQ-----AMLSGVNLSELM 53
            AE++   PLF G  EA+Q+ +I  +LG P   +W    EL +      +   +     +
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
               +  I+L+  +   DP +R TA +AL+H +FK
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--ADELRQ-----AMLSGVNLSELM 53
            AE++   PLF G  EA+Q+ +I  +LG P   +W    EL +      +   +     +
Sbjct: 191 FAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
               +  I+L+  +   DP +R TA +AL+H +FK
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 8   RPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELMPSASKDA 60
           RPLF G D  +Q+ +I  +LG PT + W    +           +  +L  ++P  +   
Sbjct: 200 RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATG 259
Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPP 95
            +L+++L   +P +R +A EALQH +F    + PP
Sbjct: 260 RDLLQNLLKCNPVQRISAEEALQHPYFSD--FCPP 292

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 8   RPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELMPSASKDA 60
           RPLF G D  +Q+ +I  +LG PT + W    +           +  +L  ++P  +   
Sbjct: 200 RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATG 259
Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPP 95
            +L+++L   +P +R +A EALQH +F    + PP
Sbjct: 260 RDLLQNLLKCNPVQRISAEEALQHPYFSD--FCPP 292

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW-------ADELRQAMLSGVNLS--E 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +         A    Q++ S   ++  +
Sbjct: 238 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAK 297
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P +   A++L++ + +++P KR T  EAL H + ++
Sbjct: 298 LFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW----ADELRQAMLS-----GVNLSE 51
           MAELL  R LF GTD   Q+ +I  + G P         + E R  + S       N ++
Sbjct: 242 MAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFAD 301
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           +   A+  A++L+E +   D  KR TA+EAL H +F +
Sbjct: 302 VFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSEL-------- 52
           + E+ +  PLF G  + +Q+Y I   LGN          +  + +GV L E+        
Sbjct: 215 VTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLER 274
Query: 53  -MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
             P  S+  I+L +     DP KRP  AE L H FF+
Sbjct: 275 RYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLSGV------NLSE 51
           MAELL  + LF G+D  +Q+ +I  V+G P+   +   + E  +  +  +      +LS 
Sbjct: 219 MAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSS 278
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           +   A+  AI+L+  +   D  +R +AAEAL H +F +
Sbjct: 279 IFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 18/97 (18%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN------------ 48
            AE+L  + LF G  E EQM  I   +  P +    +E RQ +LS +             
Sbjct: 215 FAEMLTGKTLFAGAHELEQMQLILESI--PVV---HEEDRQELLSVIPVYIRNDMTEPHK 269
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
            L++L+P  S++A++ +E + ++ P  R TA EAL H
Sbjct: 270 PLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLSGV------NLSE 51
           MAELL  + LF G+D  +Q+ +I  V+G P+   +   + E  +  +  +      +LS 
Sbjct: 219 MAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSS 278
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           +   A+  AI+L+  +   D  +R +AAEAL H +F +
Sbjct: 279 IFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 18  EQMYKICSVLGNPTMDSWADELRQAMLSGV---------NLSELMPSASKDAINLIESLC 68
           +Q+  I +++G PT D   +  +  ++  +         NL +  PS S D INL+ES+ 
Sbjct: 287 DQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESML 346
Query: 69  SWDPCKRPTAAEALQHLFFK 88
            ++P KR T  +AL H + K
Sbjct: 347 KFNPNKRITIDQALDHPYLK 366

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA---DELRQAMLSGV------NLSE 51
           MAELL  + LF G+D  +Q+ +I  V+G P+ +  A    E  +  +  +      +LS 
Sbjct: 211 MAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSS 270
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           +   A+  AI+L+  +   D  +R +AAEAL H +F +
Sbjct: 271 IFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W       + + +    +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           P   +D  +L+  +  +DP KR +A  AL H FF+
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---RQAMLSGVN--LSELMPS 55
            AE+   +PLF+G+ + +Q+ KI  V+G P  + W  ++   RQA  S     + + +  
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268
Query: 56  ASKDAINLIESLCSWDPCKRPTAAEALQHLFFK---RC 90
             +   +L+    +++P KR +A  AL H +F+   RC
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---RQAMLSGVN--LSELMPS 55
            AE+   +PLF+G+ + +Q+ KI  V+G P  + W  ++   RQA  S     + + +  
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268
Query: 56  ASKDAINLIESLCSWDPCKRPTAAEALQHLFFK---RC 90
             +   +L+    +++P KR +A  AL H +F+   RC
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 218 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNR 277
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 278 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 218 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNR 277
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 278 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------LSELM 53
            AE+   +PLF G  EA+Q+ KI  ++G P  D W  ++  ++  G         +  ++
Sbjct: 201 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV--SLPRGAFPPRGPRPVQSVV 258
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           P   +    L+  + +++P KR +A  ALQH +  +
Sbjct: 259 PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---RQAMLSGVN--LSELMPS 55
            AE+   +PLF+G+ + +Q+ KI  V+G P  + W  ++   RQA  S     + + +  
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268
Query: 56  ASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
             +   +L+    +++P KR +A  AL H +F+
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------LSELM 53
            AE+   +PLF G  EA+Q+ KI  ++G P  D W  ++  ++  G         +  ++
Sbjct: 209 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV--SLPRGAFPPRGPRPVQSVV 266
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           P   +    L+  + +++P KR +A  ALQH +  +
Sbjct: 267 PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------LSELM 53
            AE+   +PLF G  EA+Q+ KI  ++G P  D W  ++  ++  G         +  ++
Sbjct: 201 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV--SLPRGAFPPRGPRPVQSVV 258
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           P   +    L+  + +++P KR +A  ALQH +  +
Sbjct: 259 PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------LSELM 53
            AE+   +PLF G  EA+Q+ KI  ++G P  D W  ++  ++  G         +  ++
Sbjct: 201 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV--SLPRGAFPPRGPRPVQSVV 258
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           P   +    L+  + +++P KR +A  ALQH +  +
Sbjct: 259 PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 11  FQGTDEAEQMYKICSVLGNPTMDSWA-----DELRQAML----SGVNLSELMPSASKDAI 61
           F      +Q+  I ++LG P+ +        D  R   +     G +L+E  P++S DAI
Sbjct: 315 FHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAI 374
Query: 62  NLIESLCSWDPCKRPTAAEALQHLFFKRCLYA 93
           +L++ +  ++P KR T  E L H FFK    A
Sbjct: 375 HLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 292 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 351
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 352 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 408

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 251 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 310
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 311 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 367

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 217 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 276
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 277 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 333

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 249 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 308
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 309 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 365

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 232 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 291
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 292 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 348

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 225 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 284
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 285 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 341

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 221 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 280
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 281 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 337

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 247 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 306
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 307 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 363

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 214 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 273
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 274 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 330

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 2   AELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-----ELRQAM--LSGVNLSELMP 54
           AE+L+  PLF G  E +Q++KI  VLG P   +W       + +Q+     G  L  ++ 
Sbjct: 229 AEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLG 288
Query: 55  SASKDAINLIES-LCSWDPCKRPTAAEALQHLFFKRCLYAP 94
           +   D    + + +   DP KR +A  AL+H +F    + P
Sbjct: 289 ALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFDP 329

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 272
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 329

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 272
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 329

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 226 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 285
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 286 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 342

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 272
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 329

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 272
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 329

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 238 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 297
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 298 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 272
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 329

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 247 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 306
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 307 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 363

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD--------SWADELRQAMLSGV---NL 49
           MAE+   + LF+G+    Q+ KI  V+G P ++        S  D LR + LS V     
Sbjct: 224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNS-LSNVPARAW 282
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP 94
           + ++P+A   A++LI  +  ++P +R +  +AL+H +F+  L+ P
Sbjct: 283 TAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE-SLFDP 326

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 218 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 277
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 278 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 334

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 225 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 284
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 285 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 341

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E +   +     +++  
Sbjct: 241 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 300
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 301 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 357

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD--------SWADELRQAMLSGV---NL 49
           MAE+   + LF+G+    Q+ KI  V+G P ++        S  D LR + LS V     
Sbjct: 224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNS-LSNVPARAW 282
Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP 94
           + ++P+A   A++LI  +  ++P +R +  +AL+H +F+  L+ P
Sbjct: 283 TAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE-SLFDP 326

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 281
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 220 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNR 279
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
           L P+A   A++L++ + +++P KR    +AL H
Sbjct: 280 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 8   RPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN--------LSELMPSASKD 59
           RPLF G+   EQ++ I  +LG PT ++W   L        N        L    P    D
Sbjct: 198 RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSD 257
Query: 60  AINLIESLCSWDPCKRPTAAEALQHLFF 87
             +L+  L  ++   R +A +A++H FF
Sbjct: 258 GADLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 281
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 238 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 297
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 298 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 218 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 277
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 278 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 223 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 282
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 283 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 224 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 283
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 284 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 215 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 274
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 275 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 281
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 281
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 220 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 279
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 280 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 216 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 275
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 276 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 218 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 277
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 278 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 281
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 223 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 282
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 283 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 281
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 226 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 285
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 286 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 218 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 277
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 278 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +     +    R  +LS      V  + 
Sbjct: 220 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 279
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
           L P+A   A++L++ + +++P KR    +AL H
Sbjct: 280 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL----RQAMLS-----GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P  +     +    R  +LS      V  + 
Sbjct: 216 LAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNR 275
Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 276 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E     +     +++  
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFR 272
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 329

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 12/118 (10%)
Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT------MDSWADELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT      M+    E     +     +++  
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFR 272
Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP----PHIRSVPAVATTT 107
           P    +AI L   L  + P  R T  EA  H FF   L  P    P+ R  PA+   T
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRDPNVKLPNGRDTPALFNFT 329

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 19/104 (18%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM----------------LSG 46
           ++FR  P F G D  +Q+ KI  VLG   ++++ ++ R  +                L  
Sbjct: 240 MIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKF 299
Query: 47  VNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC 90
           +N ++     S +AI+ ++ L  +D  +R TA EA+ H +F++ 
Sbjct: 300 MN-ADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 342

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 230 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 289
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 290 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 224 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 283
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 284 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 223 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 282
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 283 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 224 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 283
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 284 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVN-------------- 48
           ++FR  P F G D  +Q+ +I  VLG   +  + D+    +    N              
Sbjct: 225 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 284
Query: 49  -LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             SE     S +A++ ++ L  +D   R TA EA++H +F
Sbjct: 285 VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM----------------LSG 46
           ++FR  P F G D  +Q+ KI  VLG   ++ + ++ R  +                L  
Sbjct: 219 MIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKF 278
Query: 47  VNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC 90
           +N ++     S +AI+ ++ L  +D  +R TA EA+ H +F++ 
Sbjct: 279 MN-ADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM----------------LSG 46
           ++FR  P F G D  +Q+ KI  VLG   ++ + ++ R  +                L  
Sbjct: 220 MIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKF 279
Query: 47  VNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC 90
           +N ++     S +AI+ ++ L  +D  +R TA EA+ H +F++ 
Sbjct: 280 MN-ADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM----------------LSG 46
           ++FR  P F G D  +Q+ KI  VLG   ++ + ++ R  +                L  
Sbjct: 219 MIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKF 278
Query: 47  VNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC 90
           +N ++     S +AI+ ++ L  +D  +R TA EA+ H +F++ 
Sbjct: 279 MN-ADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM----------------LSG 46
           ++FR  P F G D  +Q+ KI  VLG   ++ + ++ R  +                L  
Sbjct: 219 MIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKF 278
Query: 47  VNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC 90
           +N ++     S +AI+ ++ L  +D  +R TA EA+ H +F++ 
Sbjct: 279 MN-ADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 5   LLFR--PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM----------------LSG 46
           ++FR  P F G D  +Q+ KI  VLG   ++ + ++ R  +                L  
Sbjct: 219 MIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKF 278
Query: 47  VNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC 90
           +N ++     S +AI+ ++ L  +D  +R TA EA+ H +F++ 
Sbjct: 279 MN-ADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	216
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-24
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-23
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-23
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	9e-23
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-22
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-22
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-22
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-22
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-22
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-22
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-22
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	5e-21
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	6e-21
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-20
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-20
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-20
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-20
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	5e-20
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	7e-20
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-19
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	7e-19
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-18
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-18
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-18
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-17
3rp9_A	458	Mitogen-activated protein kinase; structural genom	9e-17
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-16
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-16
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-16
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-16
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	8e-16
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	6e-14
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-13
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-12
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-11
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-11
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	8e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-06
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	8e-06
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	7e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	8e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	9e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-04
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	5e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-04
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	6e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	7e-04

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 97.6 bits (244), Expect = 1e-24
 Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 11/113 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGV---------NLSE 51
            AELL   PL+ G  + +Q+Y I   LG+               SGV          L  
Sbjct: 193 FAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLEL 252

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK--RCLYAPPHIRSVPA 102
             P+ S  A+ L++     DP +R T  + L H +F+  R +         PA
Sbjct: 253 KFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAKEHDKPA 305

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 95.4 bits (238), Expect = 1e-23
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 9/97 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAM-------LSGVNLSE 51
           + E+ +  PLF G  + +Q+Y I   LGN          +                 L  
Sbjct: 215 VTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLER 274

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
             P  S+  I+L +     DP KRP  AE L H FF+
Sbjct: 275 RYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 94.2 bits (235), Expect = 4e-23
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAML----SGVNLSELMP 54
           +AELLL  P   G  + +Q+ +I   LG PT + W D   L   +      G+ L  +  
Sbjct: 203 LAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFS 262

Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQ 114
           +A  D ++LI+ L  ++PC R TA +AL+  +F      P     +P        + +Q 
Sbjct: 263 AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG-PTPGCQLPRPNCPVETLKEQS 321

Query: 115 GAGIE-----AEALPNPNIAKQL 132
              +       EAL    + K+L
Sbjct: 322 NPALAIKRKRTEALEQGGLPKKL 344

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 92.6 bits (231), Expect = 9e-23
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAML---SGVNLSELMPS 55
            AE+   +PLF G  EA+Q+ KI  ++G P  D W     L +          +  ++P 
Sbjct: 209 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPE 268

Query: 56  ASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
             +    L+  + +++P KR +A  ALQH +  
Sbjct: 269 MEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 91.8 bits (229), Expect = 2e-22
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 11/105 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--------ADELRQAMLSGVNLSEL 52
            AE++  +PLF G  + +Q+ KI S+LG P    W          +    +      S +
Sbjct: 210 FAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSI 269

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHI 97
           +P   ++ I+L+ ++  +DP KR +A +A+ H +FK      P I
Sbjct: 270 IPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL---DPQI 311

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 92.5 bits (230), Expect = 3e-22
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 7/95 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM------LSGVNLSE-LM 53
           +AELLL +P+F G    +Q+ +I  VLG PT +   +            +     ++   
Sbjct: 247 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 306

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           P    +AI L   L  + P  R T  EA  H FF 
Sbjct: 307 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 341

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 92.0 bits (229), Expect = 3e-22
 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM------LSGVNLSE-LM 53
           MAEL+  +PLF G    +Q+ +I  VLG P+ +         M      +     S+   
Sbjct: 232 MAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFR 291

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           P    DAI+LI  L  + P  R TA EAL H FF 
Sbjct: 292 PRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 90.6 bits (226), Expect = 4e-22
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 7/95 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAMLS-----GVNLSELM 53
            AE++   PLF G  EA+Q+ +I  +LG P   +W +  EL +   +      +     +
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
               +  I+L+  +   DP +R TA +AL+H +FK
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 90.3 bits (225), Expect = 4e-22
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 7/105 (6%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQA-----MLSGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W     +          +  + S+++
Sbjct: 194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 253

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 254 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 90.8 bits (226), Expect = 5e-22
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 8/97 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLS-----GVNLSEL 52
            AE+L  + LF G  E EQM  I   +              +   + +        L++L
Sbjct: 215 FAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQL 274

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           +P  S++A++ +E + ++ P  R TA EAL H +   
Sbjct: 275 LPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 90.0 bits (224), Expect = 8e-22
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQA---MLSGVNLSELMPS 55
            AE+   +PLF+G+ + +Q+ KI  V+G P  + W     L +      S   + + +  
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268

Query: 56  ASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
             +   +L+    +++P KR +A  AL H +F+
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 88.5 bits (220), Expect = 5e-21
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 10/98 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR----QAMLS------GVNLS 50
           +AEL L RP+F G D   Q+  I  ++G P  D+    +     +  +          L 
Sbjct: 213 LAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE 272

Query: 51  ELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           ++ P  +   I+L++ +  +DP KR TA EAL+H + +
Sbjct: 273 KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 87.7 bits (218), Expect = 6e-21
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 8/96 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--------ADELRQAMLSGVNLSEL 52
             E+   RPLF G+   EQ++ I  +LG PT ++W                     L   
Sbjct: 191 FYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSH 250

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            P    D  +L+  L  ++   R +A +A++H FF 
Sbjct: 251 APRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL 286

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 87.0 bits (216), Expect = 2e-20
 Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 9/97 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLS------GVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+   ++   +   +  L        V  + 
Sbjct: 222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 281

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           L P+A   A++L++ + +++P KR    +AL H + +
Sbjct: 282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 86.6 bits (215), Expect = 2e-20
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLS------GVNLSE 51
           MAE+L  + LF+G D  +Q+ +I  V G P    +    D+  ++ +         + ++
Sbjct: 214 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ 273

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           L P AS  A +L+E +   D  KR TAA+AL H FF+
Sbjct: 274 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 85.6 bits (213), Expect = 2e-20
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 8/96 (8%)

Query: 1   MAELL-LFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQA-----MLSGVNLSEL 52
            AEL    RPLF G D  +Q+ +I  +LG PT + W    +L          +  +L  +
Sbjct: 192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV 251

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +P  +    +L+++L   +P +R +A EALQH +F 
Sbjct: 252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLS-------GVNLS 50
           MAE+   + LF+G+    Q+ KI  V+G P    +  ++    +  L            +
Sbjct: 224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWT 283

Query: 51  ELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            ++P+A   A++LI  +  ++P +R +  +AL+H +F+
Sbjct: 284 AVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 85.8 bits (213), Expect = 5e-20
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 9/97 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA----DELRQAMLS-----GVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P  +       +  R  + S      +N + 
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN 279

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +   A+  A++L+E +   D  KR TAA+AL H +F 
Sbjct: 280 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 85.5 bits (212), Expect = 7e-20
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA----DELRQAMLS-----GVNLSE 51
           MAE++  + LF+G+D  +Q+ +I  V G P  +       DE +  M         + + 
Sbjct: 216 MAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS 275

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           ++ +AS  A+NL+E +   D  +R TA EAL H +F+
Sbjct: 276 ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW--------ADELRQAMLSGVNLSEL 52
           MAE+    P+ QG  E  Q+  I  + G+ T + W         ++L         + + 
Sbjct: 219 MAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDR 278

Query: 53  MPSASKD--AINLIESLCSWDPCKRPTAAEALQHLFFK 88
           + +  +D  A++LI+ L   DP +R  + +AL H FF 
Sbjct: 279 LKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 316

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 82.3 bits (204), Expect = 7e-19
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQAMLS-----GVNLSELM 53
            AE+L+  PLF G  E +Q++KI  VLG P   +W     L     S     G  L  ++
Sbjct: 228 WAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVL 287

Query: 54  PSA-SKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            +    + ++L+ ++   DP KR +A  AL+H +F 
Sbjct: 288 GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 82.0 bits (203), Expect = 1e-18
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD------ELRQAMLSGVNLSEL-- 52
            AE++L  P+F+G + A Q+++I  VLG P+ +          ++      G+  S +  
Sbjct: 222 FAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFS 281

Query: 53  --MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
                 +K+A +L+ +L  + P +R    EAL H +F 
Sbjct: 282 DHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 81.1 bits (201), Expect = 1e-18
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 12/100 (12%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD--ELRQA----------MLSGVN 48
           +AE++  +PLF GT++ EQ+  I  ++G P    W    +L +            L  V 
Sbjct: 199 LAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVL 258

Query: 49  LSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
                     + ++ +  L   +P  R +A +AL H +F 
Sbjct: 259 QPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 80.9 bits (200), Expect = 3e-18
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA------DELRQAMLSGVNLSELMP 54
             EL+L +PLF G    +Q+ +I  ++G PT +          E+R   L   +  +++P
Sbjct: 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291

Query: 55  SAS-KDAINLIESLCSWDPCKRPTAAEALQHLFF 87
             +   AI+L+E +  ++P  R    EA+ H FF
Sbjct: 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 78.7 bits (194), Expect = 2e-17
 Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 25/113 (22%)

Query: 1   MAELLLFRPLFQGTDE---------AEQMYKICSVLGNPTMDSWAD-------------- 37
            AELL   P+F    E          +Q+ +I +V+G P    W D              
Sbjct: 226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDF 285

Query: 38  --ELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
                        + +        A +L++ L + DP KR T+ +A+Q  +F 
Sbjct: 286 RRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL 338

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 77.2 bits (190), Expect = 9e-17
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 40/129 (31%)

Query: 1   MAELLLF-----------RPLFQGTD--------------------EAEQMYKICSVLGN 29
            AELL              PLF G+                       +Q+  I ++LG 
Sbjct: 274 FAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGT 333

Query: 30  PTMDSWA----DELRQAMLS-----GVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE 80
           P+ +       ++ ++ +       G +L+E  P++S DAI+L++ +  ++P KR T  E
Sbjct: 334 PSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINE 393

Query: 81  ALQHLFFKR 89
            L H FFK 
Sbjct: 394 CLAHPFFKE 402

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 76.2 bits (188), Expect = 1e-16
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 16/104 (15%)

Query: 1   MAELLLFR-PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM---------------L 44
           +A ++  + P F G D  +Q+ +I  VLG   +  + D+    +                
Sbjct: 221 LASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 280

Query: 45  SGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
                SE     S +A++ ++ L  +D   R TA EA++H +F 
Sbjct: 281 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 75.1 bits (185), Expect = 3e-16
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 20/108 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPT---MDSWADELRQAMLS-----GVNLSEL 52
           M E++    LF GTD  +Q  K+   LG P    M      +R  + +     G +  +L
Sbjct: 216 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKL 275

Query: 53  MPSA------------SKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            P              +  A +L+  +   D  KR +  EALQH +  
Sbjct: 276 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 75.1 bits (185), Expect = 3e-16
 Identities = 23/113 (20%), Positives = 50/113 (44%), Gaps = 25/113 (22%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD-----------------------SWAD 37
           + E+L  +P+F G+    Q+ +I  V+  P+ +                         ++
Sbjct: 221 LGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSN 280

Query: 38  ELRQAMLSGVNLSELMPSA--SKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +          L ++ P A  +++A++L++ L  ++P KR +A +AL+H F  
Sbjct: 281 KRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVS 333

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 74.9 bits (184), Expect = 4e-16
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 20/108 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWA---DELRQAMLS-----GVNLSEL 52
           M E++  + LF G D  +Q  K+   LG P  +        +R  + +     G+   +L
Sbjct: 253 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 312

Query: 53  MPSA------------SKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            P +            +  A +L+  +   DP KR +  +ALQH +  
Sbjct: 313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 74.4 bits (183), Expect = 8e-16
 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 37/126 (29%)

Query: 1   MAELLL-----------FRPLFQGT-----------------DEAEQMYKICSVLGNPT- 31
            AELL              PLF G+                    +Q+  I +++G PT 
Sbjct: 242 FAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTE 301

Query: 32  --MDSWADELRQAMLS------GVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQ 83
             + +         +        +NL +  PS S D INL+ES+  ++P KR T  +AL 
Sbjct: 302 DDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD 361

Query: 84  HLFFKR 89
           H + K 
Sbjct: 362 HPYLKD 367

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 68.5 bits (168), Expect = 6e-14
 Identities = 28/130 (21%), Positives = 43/130 (33%), Gaps = 25/130 (19%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP-------------------TMDSWADELRQ 41
           + E      LFQ  +  E +  +  +LG                       D  + + R 
Sbjct: 229 LFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRY 288

Query: 42  AMLSGVNLSELMPSASKD---AINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
              +   L   M   S +     +L+  +  +DP +R T AEAL H FF       P  R
Sbjct: 289 VKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL---TPEER 345

Query: 99  SVPAVATTTR 108
           S       +R
Sbjct: 346 SFHTSRNPSR 355

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 22/111 (19%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP-------------------TMDSWADELRQ 41
           + E  L   +F   D  E +  +  +LG                       D  +   R 
Sbjct: 224 LIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRY 283

Query: 42  AMLSGVNLSELMPSASKD---AINLIESLCSWDPCKRPTAAEALQHLFFKR 89
              +   L E M S   +     +LI+ +  +DP KR T  EAL+H FF  
Sbjct: 284 VSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 64.7 bits (158), Expect = 1e-12
 Identities = 28/138 (20%), Positives = 45/138 (32%), Gaps = 37/138 (26%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNP---------------------------TMD 33
           +AELL   PL  G DE +Q+  +  +LG P                           T+ 
Sbjct: 289 LAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLS 348

Query: 34  SWAD------ELRQAMLSGVNLSELMPSASKDA----INLIESLCSWDPCKRPTAAEALQ 83
             +         R  +       E   +         ++ ++    WDP  R T  +AL+
Sbjct: 349 DGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408

Query: 84  HLFFKRCLYAPPHIRSVP 101
           H + +R L  PP      
Sbjct: 409 HPWLRRRLPKPPTGEKTS 426

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 28/114 (24%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD--------------------------S 34
           +AEL     LF+  +  E +  + S++     +                          +
Sbjct: 249 LAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENA 308

Query: 35  WADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            +    + +   + L +++    +   + + S+   DP  RP+ AE L+H F +
Sbjct: 309 SSINSIKHVKKCLPLYKIIKH--ELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 60.1 bits (146), Expect = 5e-11
 Identities = 27/131 (20%), Positives = 38/131 (29%), Gaps = 42/131 (32%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMD--------------------------- 33
           + E+    PLF G +E +QM KI  VLG P                              
Sbjct: 248 LVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKD 307

Query: 34  -------SWADELRQAMLSGVNLSELMPSASKDA--------INLIESLCSWDPCKRPTA 78
                      +L   +           +              +LI  +  +DP  R   
Sbjct: 308 GKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQP 367

Query: 79  AEALQHLFFKR 89
             ALQH FFK+
Sbjct: 368 YYALQHSFFKK 378

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 53.6 bits (129), Expect = 8e-09
 Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 26/117 (22%)

Query: 1   MAELLLFRPLFQG------TDEAEQMYKICSVLGNPTM-------------DSWADELRQ 41
           + EL+    LF+       T + + + +I  +LG                 +S       
Sbjct: 225 IFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNI 284

Query: 42  AMLSGVNLSELMPSASK----DA---INLIESLCSWDPCKRPTAAEALQHLFFKRCL 91
           + L    L +++    K    +A    + +  +   DP KR  A   + H + K  L
Sbjct: 285 SKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 35  WADELRQA--MLSGVNLSELMP--SASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
                RQA  +L   +L  L P       A  LIE + + DP KRP+A   L+H FF 
Sbjct: 231 GKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW 288

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 47.9 bits (114), Expect = 8e-07
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            S   +A +LI  +   DP KRPTA + L+H  F 
Sbjct: 266 RSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 20/87 (22%)

Query: 3   ELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAIN 62
           E++   P   G +    + K+ S   +                         +  K    
Sbjct: 223 EMI--YPFSTGMERVNILKKLRS--VSIEFPPD----------------FDDNKMKVEKK 262

Query: 63  LIESLCSWDPCKRPTAAEALQHLFFKR 89
           +I  L   DP KRP A   L   +   
Sbjct: 263 IIRLLIDHDPNKRPGARTLLNSGWLPV 289

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 11/52 (21%), Positives = 19/52 (36%)

Query: 38  ELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           E  Q +  G    E     S +  +++  +   DP  R TA   L     ++
Sbjct: 259 EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 45.1 bits (107), Expect = 6e-06
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 23/112 (20%)

Query: 4   LLLFRPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDAI 61
           LL   P F G  + E + K+    G  T DS  W                   + S+ A 
Sbjct: 230 LLAGYPPFGGQTDQEILRKVEK--GKYTFDSPEW------------------KNVSEGAK 269

Query: 62  NLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQ 113
           +LI+ +  +D  +R +A +AL+H + K           +P++       +++
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSL-ANAIENMRK 320

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 44.7 bits (106), Expect = 7e-06
 Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 27/158 (17%)

Query: 3   ELLLFRPLFQG-TDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAI 61
            +   +  FQ   ++  +++ I  +  N  ++                        KD  
Sbjct: 212 YMTYGKTPFQQIINQISKLHAI--IDPNHEIEFP------------------DIPEKDLQ 251

Query: 62  NLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAE 121
           ++++     DP +R +  E L H + +           V  +A  T   +K     +   
Sbjct: 252 DVLKCCLKRDPKQRISIPELLAHPYVQ------IQTHPVNQMAKGTTEEMKYVLGQLVGL 305

Query: 122 ALPNPNIAKQLSPLDIIMVVQPKNSVKKQKYYTASGRK 159
             PN  +    +  +     +  NS   + +    G+K
Sbjct: 306 NSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKRGKK 343

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 44.7 bits (105), Expect = 8e-06
 Identities = 15/89 (16%), Positives = 25/89 (28%), Gaps = 13/89 (14%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           +  +      F       +       L  P  DS A      +          P   K  
Sbjct: 283 IYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPL----------PDFVKT- 331

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKR 89
             LI    ++D  +R    EA++   F +
Sbjct: 332 --LIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 44.4 bits (105), Expect = 9e-06
 Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 6/106 (5%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQ 113
               KD  ++++     DP +R +  E L H + +           V  +A  T   +K 
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ------IQTHPVNQMAKGTTEEMKY 344

Query: 114 QGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSVKKQKYYTASGRK 159
               +     PN  +    +  +     +  NS   + +    G+K
Sbjct: 345 VLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKRGKK 390

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 22/83 (26%)

Query: 4   LLLFRPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDAI 61
           LL   P F G +E + + K+    G  T +   W                     S+ A 
Sbjct: 220 LLSGCPPFNGANEYDILKKVEK--GKYTFELPQW------------------KKVSESAK 259

Query: 62  NLIESLCSWDPCKRPTAAEALQH 84
           +LI  + ++ P  R +A +AL H
Sbjct: 260 DLIRKMLTYVPSMRISARDALDH 282

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 23/108 (21%)

Query: 8   RPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDAINLIE 65
            P F G +E + + ++ +  G    D   W                   + S DA +LI 
Sbjct: 219 TPPFYGKNEYDILKRVET--GKYAFDLPQW------------------RTISDDAKDLIR 258

Query: 66  SLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQ 113
            + ++ P  R TA + L+H + ++     P I  +P    +    ++Q
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLP-SLESAMTNIRQ 305

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 15/54 (27%), Positives = 24/54 (44%)

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAV 103
            E   S S+ A + I+SL   +P KRPTA   L H + ++  +         + 
Sbjct: 254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSS 307

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 22/79 (27%)

Query: 8   RPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDAINLIE 65
            P F G ++ + + K+    G    D   W                   + S +A  LI+
Sbjct: 244 YPPFGGQNDQDIIKKVEK--GKYYFDFNDW------------------KNISDEAKELIK 283

Query: 66  SLCSWDPCKRPTAAEALQH 84
            + ++D  KR TA EAL  
Sbjct: 284 LMLTYDYNKRCTAEEALNS 302

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 43.3 bits (102), Expect = 3e-05
 Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 18/104 (17%)

Query: 11  FQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSW 70
           F G ++ E +  + S   +  MD                       S+D  + I  L   
Sbjct: 356 FGGENDDETLRNVKS--CDWNMDD----------------SAFSGISEDGKDFIRKLLLA 397

Query: 71  DPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQ 114
           DP  R T  +AL+H +           +   +  T  R  +K +
Sbjct: 398 DPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTK 441

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 48  NLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
               L          +++ + S  P +RP A + +++  F+
Sbjct: 290 KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 14/87 (16%), Positives = 23/87 (26%), Gaps = 21/87 (24%)

Query: 3   ELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAIN 62
           EL    P F    + E   KI    G                       +    S +   
Sbjct: 208 ELCALMPPFTAFSQKELAGKIRE--GKF-------------------RRIPYRYSDELNE 246

Query: 63  LIESLCSWDPCKRPTAAEALQHLFFKR 89
           +I  + +     RP+  E L++     
Sbjct: 247 IITRMLNLKDYHRPSVEEILENPLILE 273

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 22/95 (23%)

Query: 4   LLLFRPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDAI 61
           LL   P F    ++E M KI    G  T     W                   + S  A 
Sbjct: 200 LLCGYPPFSAPTDSEVMLKIRE--GTFTFPEKDW------------------LNVSPQAE 239

Query: 62  NLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPH 96
           +LI  L +  P +R T+ +AL+H +F++ L + P 
Sbjct: 240 SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 274

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 57  SKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
            K    L++ L S  P  RP  +E L+ L   +
Sbjct: 241 DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 10/56 (17%)

Query: 57  SKDAINLIESLCSWDPCKRPTAAEALQHLFFK----------RCLYAPPHIRSVPA 102
           +  A +LI+ +   DP  RPT  E L   FF            CL  PP     P+
Sbjct: 239 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPS 294

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 3/89 (3%)

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRG 109
            E   + S  A + I  L   DP KR T  ++LQH + K         R   AV      
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEK-- 295

Query: 110 MLKQQGAGIEAEALPNPNIAKQLSPLDII 138
             K+  A  ++       +        I 
Sbjct: 296 -FKKFAARKKSNNGSGGGLNDIFEAQKIE 323

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 41.5 bits (97), Expect = 8e-05
 Identities = 4/45 (8%), Positives = 15/45 (33%), Gaps = 3/45 (6%)

Query: 57  SKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVP 101
            +    L+E    +    R    +A++   +++       + +  
Sbjct: 333 PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ---LRTELSAAL 374

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 41.7 bits (98), Expect = 8e-05
 Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 22/88 (25%)

Query: 4   LLLFRPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDAI 61
           LL+    F G ++A+ + ++ +       ++  +                     S  A 
Sbjct: 269 LLMGAVPFPGVNDADTISQVLN--KKLCFENPNY------------------NVLSPLAR 308

Query: 62  NLIESLCSWDPCKRPTAAEALQHLFFKR 89
           +L+ +L + +  +R  A  ALQH +  +
Sbjct: 309 DLLSNLLNRNVDERFDAMRALQHPWISQ 336

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 41.5 bits (98), Expect = 9e-05
 Identities = 14/56 (25%), Positives = 20/56 (35%)

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVAT 105
            E     S+ A + I  L   +  KR T  EAL+H +          +R    V  
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNL 294

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 14/56 (25%), Positives = 20/56 (35%)

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVAT 105
            E     S+ A + I  L   +  KR T  EAL+H +          +R    V  
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNL 294

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
               KD  ++++     DP +R +  E L H + + 
Sbjct: 263 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 24/97 (24%), Positives = 31/97 (31%), Gaps = 26/97 (26%)

Query: 5   LL--FRPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDA 60
           LL    P F GT E      I    G   M+   W                     S+ A
Sbjct: 226 LLSGCLP-FYGTKE-RLFEGIIK--GKYKMNPRQW------------------SHISESA 263

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHI 97
            +L+  +   DP +R T  EAL H + K        I
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKI 300

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 22/83 (26%)

Query: 4   LLLFRPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDAI 61
           LL   P F G +E + + ++ +  G    D   W                   + S DA 
Sbjct: 215 LLSGTPPFYGKNEYDILKRVET--GKYAFDLPQW------------------RTISDDAK 254

Query: 62  NLIESLCSWDPCKRPTAAEALQH 84
           +LI  + ++ P  R TA + L+H
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEH 277

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
            E   + S+ A + I  L   DP +R T A++L+H
Sbjct: 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 57  SKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC 90
           S    + +E     +P  RP+A+  L H FFK+ 
Sbjct: 307 SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 21/89 (23%)

Query: 3   ELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAIN 62
           EL   +  F+       + KI S  G+                      +    S D  +
Sbjct: 217 ELCTLKHAFEAGSMKNLVLKIIS--GSF-------------------PPVSLHYSYDLRS 255

Query: 63  LIESLCSWDPCKRPTAAEALQHLFFKRCL 91
           L+  L   +P  RP+    L+  F  + +
Sbjct: 256 LVSQLFKRNPRDRPSVNSILEKGFIAKRI 284

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 18/74 (24%)

Query: 11  FQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSW 70
           F G D+ E +  +     +   D                 +   S S +A + I++L   
Sbjct: 250 FAGEDDLETLQNVKR--CDWEFDE----------------DAFSSVSPEAKDFIKNLLQK 291

Query: 71  DPCKRPTAAEALQH 84
           +P KR T  +AL+H
Sbjct: 292 EPRKRLTVHDALEH 305

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
            E+    S+ A++L++ L   DP  R T  EAL+H + +
Sbjct: 366 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 25/84 (29%)

Query: 5   LL--FRPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDA 60
           LL  + P F   D+     +I +  G     S  W                   + + +A
Sbjct: 206 LLVGYPP-FWDEDQHRLYQQIKA--GAYDFPSPEW------------------DTVTPEA 244

Query: 61  INLIESLCSWDPCKRPTAAEALQH 84
            +LI  + + +P KR TAAEAL+H
Sbjct: 245 KDLINKMLTINPSKRITAAEALKH 268

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
            E     S +A++ ++ L   +   R TA+EALQH
Sbjct: 224 EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
              S    +LI  L   DP  R TA +ALQH FF+R
Sbjct: 330 DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 50  SELMPSASKDAINLIESLCSWDPCKRPTAAEALQH 84
            E     S++A   I  L   +   R +A+EAL+H
Sbjct: 309 DEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 23/32 (71%)

Query: 57  SKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           +  A++L++ + + DP +RP+AA+ L H +FK
Sbjct: 252 TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 22/82 (26%)

Query: 9   PLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDAINLIES 66
           P F   D+     +I +  G     S  W                   + + +A +LI+S
Sbjct: 228 PPFWDEDQHRLYAQIKA--GAYDYPSPEW------------------DTVTPEAKSLIDS 267

Query: 67  LCSWDPCKRPTAAEALQHLFFK 88
           + + +P KR TA +AL+  +  
Sbjct: 268 MLTVNPKKRITADQALKVPWIC 289

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 11/81 (13%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQ 113
              S+ A++L++ L   DP  R T  EAL+H + +              +    + +L +
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD-----------EDMKRKFQDLLSE 293

Query: 114 QGAGIEAEALPNPNIAKQLSP 134
           +        +       +  P
Sbjct: 294 ENESTALPQVLAQPSTSRKRP 314

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQH 84
              S +A +L+  L   DP KR T  +ALQH
Sbjct: 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
              S    +L+       P KR TA EAL H FF++
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 39.9 bits (93), Expect = 3e-04
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 58  KDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
               + +  +    P KR TAAE L+H +  
Sbjct: 366 AGFTDFLLPMLELIPEKRATAAECLRHPWLN 396

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQH 84
              S+ A + I  L   DP +R T  +AL H
Sbjct: 232 DDISESAKDFICHLLEKDPNERYTCEKALSH 262

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 25/88 (28%)

Query: 5   LL--FRPLFQGTDEAEQMYKICSVLGNPTMDS--WADELRQAMLSGVNLSELMPSASKDA 60
           LL  + P F   D+     +I +  G     S  W                   + + +A
Sbjct: 200 LLVGYPP-FWDEDQHRLYAQIKA--GAYDYPSPEW------------------DTVTPEA 238

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFK 88
            +LI+S+ + +P KR TA +AL+  +  
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWIC 266

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 10/50 (20%), Positives = 22/50 (44%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPAV 103
            + S++A +LI+ L + DP KR   +    + + +       +    P +
Sbjct: 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDI 290

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 10/55 (18%)

Query: 57  SKDAINLIESLCSWDPCKRPTAAEALQHLFFKR----------CLYAPPHIRSVP 101
           +  A +LI+ +   DP  RPT  E L   FF            CL  PP     P
Sbjct: 265 NPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAP 319

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 57  SKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           S++   L++ +   DP +RP+A   ++H     
Sbjct: 253 SQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 38.6 bits (90), Expect = 7e-04
 Identities = 11/84 (13%), Positives = 22/84 (26%), Gaps = 3/84 (3%)

Query: 7   FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNL---SELMPSASKDAINL 63
           FRP        E MYKI +   +  +          +    ++     L          +
Sbjct: 223 FRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPV 282

Query: 64  IESLCSWDPCKRPTAAEALQHLFF 87
           + ++   D  K     +       
Sbjct: 283 LANILEADQEKCWGFDQFFAETSD 306

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 11/47 (23%), Positives = 17/47 (36%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSV 100
           P  S     L+ S+ + DP +RP     L  L   +      H   +
Sbjct: 270 PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQI 316

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPH 96
            S S  A +L+  +   DP +R TAA  L+H +       P +
Sbjct: 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQY 290

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	216
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.65
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.57
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.53
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.53
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.52
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.46
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.44
3niz_A	311	Rhodanese family protein; structural genomics, str	99.43
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.42
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.42
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.39
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.38
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.38
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.38
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.37
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.37
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.37
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.37
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.36
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.35
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.31
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.29
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.29
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.28
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.26
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.26
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.23
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.23
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.22
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.21
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.21
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.21
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.21
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.2
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.2
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.2
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.18
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.17
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.15
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.15
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.14
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.12
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.1
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.09
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.09
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.06
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.04
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.03
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.03
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.02
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.99
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.99
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.94
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.93
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.93
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	98.92
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.92
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.92
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.92
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.91
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.91
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.91
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.91
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.91
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.9
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.9
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.9
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.9
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.89
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.89
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.88
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.87
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.87
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.86
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.86
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.86
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	98.86
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.85
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.84
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.84
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.83
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.82
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.82
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.82
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.8
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.79
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.78
3bhy_A	283	Death-associated protein kinase 3; death associate	98.78
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.78
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.77
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.77
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.76
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.75
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.75
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.74
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.72
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.72
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.71
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.7
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.68
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.68
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.67
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.67
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.67
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.64
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.64
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.64
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.63
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.63
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.62
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.62
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.61
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.6
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.6
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.59
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.59
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.59
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.57
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.55
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.55
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.53
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.53
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.52
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.52
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.52
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.52
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.5
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.5
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.5
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.49
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.49
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.48
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.47
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.45
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.45
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.42
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.41
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.37
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.37
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.28
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.27
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.27
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.26
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.26
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.22
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.22
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.22
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.21
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.2
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.15
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.11
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	98.08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	98.07
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.07
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	97.99
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	97.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	97.9
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	97.89
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	97.88
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	97.88
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	97.87
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	97.85
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	97.84
3soc_A	322	Activin receptor type-2A; structural genomics cons	97.83
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	97.82
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	97.8
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	97.79
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	97.78
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	97.78
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	97.74
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	97.73
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	97.71
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	97.71
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	97.71
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	97.71
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	97.7
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	97.7
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	97.69
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	97.68
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	97.68
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	97.63
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	97.62
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	97.61
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	97.61
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	97.61
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	97.6
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	97.58
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	97.58
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	97.58
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	97.57
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	97.57
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	97.55
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	97.53
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	97.52
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	97.51
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	97.5
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	97.5
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	97.5
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	97.5
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	97.47
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	97.47
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	97.45
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	97.45
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	97.43
3pls_A	298	Macrophage-stimulating protein receptor; protein k	97.41
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	97.4
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	97.39
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	97.38
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	97.38
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	97.37
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	97.36
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	97.33
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	97.33
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	97.31
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	97.3
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	97.3
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	97.29
3uqc_A	286	Probable conserved transmembrane protein; structur	97.29
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	97.29
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	97.23
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	97.22
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	97.22
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	97.2
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.2
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.19
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	97.16
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	97.15
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	97.14
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	97.13
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	97.1
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.03
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	97.03
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	97.02
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	96.99
3q4u_A	301	Activin receptor type-1; structural genomics conso	96.94
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	96.86
2a19_B	284	Interferon-induced, double-stranded RNA-activated	96.85
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	96.78
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	96.72
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	96.4
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	96.31
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	96.06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	94.65
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	83.69

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.65  E-value=9.7e-17  Score=143.66  Aligned_cols=90  Identities=28%  Similarity=0.418  Sum_probs=78.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHH---------hhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---------RQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~---------~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ||||++|++||.|.++.+++..|++.+|.|+...|....         .++...+.+|..+++.++++++|||.+||++|
T Consensus       253 l~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d  332 (398)
T 4b99_A          253 FGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFE  332 (398)
T ss_dssp             HHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCC
Confidence            589999999999999999999999999999987765332         23355667788889999999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+||.|||+||||++.
T Consensus       333 P~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          333 PSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             TTTSCCHHHHTTSGGGTTT
T ss_pred             hhHCcCHHHHhcCHhhCcC
Confidence            9999999999999999974

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.57  E-value=8.4e-15  Score=129.85  Aligned_cols=125  Identities=25%  Similarity=0.303  Sum_probs=96.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh------ccccCCCccccCC-CCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ------AMLSGVNLSELMP-SASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~------~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~   73 (216)
                      ||||++|+++|.+.+..+++..|++.+|.|+.+.+......      +......+...++ .+++++.+||.+||.+||.
T Consensus       232 l~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  311 (394)
T 4e7w_A          232 MAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPS  311 (394)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChh
Confidence            58999999999999999999999999999999888754321      1333444555554 4889999999999999999


Q ss_pred             CCCCHHHHHcCccccCCCCCCCCCCCCccccchhhhhhhhhccccCCcCCCCCCCCCCCCHHHhhhccCchhhhh
Q 042950           74 KRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSVK  148 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~el~~~~q~~k~~~  148 (216)
                      +|+|+.|+|+||||+++.+...                      ..+.+... +++++|+.+++++..+..+.+.
T Consensus       312 ~R~t~~e~l~hp~f~~~~~~~~----------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  363 (394)
T 4e7w_A          312 ARLTAIEALCHPFFDELRTGEA----------------------RMPNGREL-PPLFNWTKEELSVRPDLISRLV  363 (394)
T ss_dssp             GSCCHHHHHTSGGGSTTTSSCC----------------------CCTTSSCC-CCSCCCCHHHHHTCGGGHHHHS
T ss_pred             hCCCHHHHhcChhhhhhccccc----------------------cCCCCCCC-CCcCCCCHHHhhcCHHHHHhhc
Confidence            9999999999999998543322                      12222223 3489999999998887766655

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.53  E-value=5.5e-15  Score=130.07  Aligned_cols=133  Identities=22%  Similarity=0.336  Sum_probs=93.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh------hccccCCCccccCC-CCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR------QAMLSGVNLSELMP-SASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~------~~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~   73 (216)
                      ||||++|+++|.+.+..+++..|++++|.|+.+.|.....      ++......|...++ ..++++.+||.+||.+||.
T Consensus       232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  311 (383)
T 3eb0_A          232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD  311 (383)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence            5899999999999999999999999999999988865432      12333445555555 3789999999999999999


Q ss_pred             CCCCHHHHHcCccccCCCCCCCCCCCCccccchhhhhhhhhccccCCcCC-CCCCCCCCCCHHHhhh-ccCchhhhh
Q 042950           74 KRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEAL-PNPNIAKQLSPLDIIM-VVQPKNSVK  148 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~fs~~el~~-~~q~~k~~~  148 (216)
                      +|+|+.|+|+||||+++...-....               +....++.+. ..-+.+|+|+..||++ ..+..+.|.
T Consensus       312 ~R~t~~e~l~hp~f~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  373 (383)
T 3eb0_A          312 LRINPYEAMAHPFFDHLRNSYESEV---------------KNNSNFPHGVNQNIPQLFNFSPYELSIIPGNVLNRIL  373 (383)
T ss_dssp             GSCCHHHHHTSGGGHHHHHC---------------------------------CCCCSCCCHHHHHHSCHHHHHHHS
T ss_pred             hCCCHHHHhcCHHHHHHHhhccccc---------------cccccCCCcccCCCCCCCCCCHHHHhcCCHHHHhhcC
Confidence            9999999999999987422110000               0112233331 1224489999999997 666655554

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.53  E-value=6.9e-15  Score=129.90  Aligned_cols=90  Identities=26%  Similarity=0.322  Sum_probs=66.0

Q ss_pred             CcccccCCCCC-CCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-----cc---------------------------cCC
Q 042950            1 MAELLLFRPLF-QGTDEAEQMYKICSVLGNPTMDSWADELRQA-----ML---------------------------SGV   47 (216)
Q Consensus         1 L~ELltG~plF-~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-----~~---------------------------~~~   47 (216)
                      ||||++|++|| .+.++.+++.+|+.++|++....+.......     ..                           ...
T Consensus       237 l~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  316 (361)
T 4f9c_A          237 FLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHA  316 (361)
T ss_dssp             HHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-----------------
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccc
Confidence            58999999665 6788999999999999986554443321110     00                           000


Q ss_pred             CccccCCCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           48 NLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        48 ~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ...+.+..++++++|||.+||++||++|+||+|||+||||+++
T Consensus       317 ~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          317 TNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             -----CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            1112234689999999999999999999999999999999985

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.52  E-value=2.3e-14  Score=128.10  Aligned_cols=125  Identities=22%  Similarity=0.273  Sum_probs=94.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh------hccccCCCccccCC-CCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR------QAMLSGVNLSELMP-SASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~------~~~~~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~   73 (216)
                      ||||++|+++|.+.+..+++.+|++++|.|..+.|..+..      ++......|...++ .+++++++||.+||.+||.
T Consensus       247 l~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~  326 (420)
T 1j1b_A          247 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT  326 (420)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChh
Confidence            5899999999999999999999999999999998875422      12333444554443 5789999999999999999


Q ss_pred             CCCCHHHHHcCccccCCCCCCCCCCCCccccchhhhhhhhhccccCCcCCCCCCCCCCCCHHHhhhccCchhhhh
Q 042950           74 KRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSVK  148 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~el~~~~q~~k~~~  148 (216)
                      +|+|+.|+|+||||+++.....                      ..+.+.. .+.+++|+..+++...+....+.
T Consensus       327 ~R~t~~e~l~hp~f~~~~~~~~----------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  378 (420)
T 1j1b_A          327 ARLTPLEACAHSFFDELRDPNV----------------------KLPNGRD-TPALFNFTTQELSSNPPLATILI  378 (420)
T ss_dssp             GSCCHHHHHTSGGGGGGGCTTC----------------------CCTTSCC-CCCCCCCCHHHHTTCGGGHHHHS
T ss_pred             HCCCHHHHhCCHhhcccccccc----------------------cCCCCCC-CCccCCCCHHHhccChhHHHhhC
Confidence            9999999999999988433221                      1111212 23478999999987666655543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.46  E-value=9.7e-14  Score=121.89  Aligned_cols=90  Identities=31%  Similarity=0.448  Sum_probs=79.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHH---------HhhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADE---------LRQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~---------~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ||||++|+++|.+.+..+++..|++++|.|+.+.+...         ..++......+..+++.+++++++||.+||.+|
T Consensus       216 l~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~d  295 (367)
T 1cm8_A          216 MAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLD  295 (367)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCC
Confidence            58999999999999999999999999999998876532         223355667788888899999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.|||+||||++.
T Consensus       296 P~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          296 AEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             TTTSCCHHHHHHSGGGTTT
T ss_pred             hhHCCCHHHHhcChHHHhh
Confidence            9999999999999999984

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.44  E-value=1e-13  Score=124.59  Aligned_cols=93  Identities=35%  Similarity=0.555  Sum_probs=75.6

Q ss_pred             Cccccc-----------CCCCCCCCC--------------------HHHHHHHHHHhhCCCCHHHHHHHHh---------
Q 042950            1 MAELLL-----------FRPLFQGTD--------------------EAEQMYKICSVLGNPTMDSWADELR---------   40 (216)
Q Consensus         1 L~ELlt-----------G~plF~g~s--------------------~~dql~~I~~ilG~p~~~~~~~~~~---------   40 (216)
                      ||||++           |+++|+|.+                    +.+++..|++++|.|+.+.|.....         
T Consensus       274 l~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~  353 (458)
T 3rp9_A          274 FAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI  353 (458)
T ss_dssp             HHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTT
T ss_pred             HHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHh
Confidence            578998           899999876                    4799999999999999887754321         


Q ss_pred             hccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCCCC
Q 042950           41 QAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYA   93 (216)
Q Consensus        41 ~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~~~   93 (216)
                      ++......+.+.++.++++++|||.+||++||.+|+|++|||+||||+++.+.
T Consensus       354 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~  406 (458)
T 3rp9_A          354 FPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA  406 (458)
T ss_dssp             SCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred             cCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence            22445566777888899999999999999999999999999999999986543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.43  E-value=5.7e-14  Score=120.23  Aligned_cols=90  Identities=30%  Similarity=0.604  Sum_probs=77.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|+++|.+.++.+++..|+.++|.+....|+....++        ......+..+.+.+++++++||.+||.+||
T Consensus       210 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  289 (311)
T 3niz_A          210 FAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDP  289 (311)
T ss_dssp             HHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCT
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCCh
Confidence            589999999999999999999999999999888877654443        223445556667789999999999999999


Q ss_pred             CCCCCHHHHHcCccccCC
Q 042950           73 CKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~   90 (216)
                      .+|+|+.|+|+||||+++
T Consensus       290 ~~Rpt~~ell~hp~f~~~  307 (311)
T 3niz_A          290 NKRISARDAMNHPYFKDL  307 (311)
T ss_dssp             TTSCCHHHHHTSGGGTTS
T ss_pred             hHCCCHHHHhcCcccccC
Confidence            999999999999999985

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.42  E-value=1.9e-13  Score=122.54  Aligned_cols=93  Identities=35%  Similarity=0.502  Sum_probs=76.6

Q ss_pred             Cccccc-----------CCCCCCCCC-----------------HHHHHHHHHHhhCCCCHHHHHHHH---------hhcc
Q 042950            1 MAELLL-----------FRPLFQGTD-----------------EAEQMYKICSVLGNPTMDSWADEL---------RQAM   43 (216)
Q Consensus         1 L~ELlt-----------G~plF~g~s-----------------~~dql~~I~~ilG~p~~~~~~~~~---------~~~~   43 (216)
                      ||||++           |+|+|+|.+                 ..+|+..|++++|.|+.+.+....         .++.
T Consensus       242 l~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~  321 (432)
T 3n9x_A          242 FAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPH  321 (432)
T ss_dssp             HHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCC
T ss_pred             HHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCC
Confidence            478887           889999876                 589999999999999988775321         1224


Q ss_pred             ccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCCCC
Q 042950           44 LSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYA   93 (216)
Q Consensus        44 ~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~~~   93 (216)
                      .....+...++.+++++++||.+||++||.+|+|+.|||+||||+++.+.
T Consensus       322 ~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~  371 (432)
T 3n9x_A          322 RKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKK  371 (432)
T ss_dssp             CCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCT
T ss_pred             CCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCc
Confidence            44556667778899999999999999999999999999999999986443

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.42  E-value=8.3e-14  Score=122.54  Aligned_cols=90  Identities=33%  Similarity=0.467  Sum_probs=77.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHH---------hhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---------RQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~---------~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ||||++|+++|.+.+..+++..|++++|.|..+.+....         .++......+..+++.+++++.+||.+||.+|
T Consensus       220 l~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~d  299 (367)
T 2fst_X          220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD  299 (367)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCC
Confidence            589999999999999999999999999999887765321         22344556777778889999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.|+|+||||+..
T Consensus       300 P~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          300 SDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             GGGSCCHHHHHTSGGGTTT
T ss_pred             cccCcCHHHHhcChhhhhc
Confidence            9999999999999999974

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.39  E-value=1.5e-13  Score=120.88  Aligned_cols=90  Identities=23%  Similarity=0.448  Sum_probs=70.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh---------hc---cccCCCccccCC-------------C
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR---------QA---MLSGVNLSELMP-------------S   55 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~---------~~---~~~~~~l~~~~~-------------~   55 (216)
                      ||||++|+++|.|.+..+++..|+..+|.|..+.+.....         ++   ......+..+++             .
T Consensus       221 l~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (388)
T 3oz6_A          221 LGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD  300 (388)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCC
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccccccccc
Confidence            5899999999999999999999999999999877643211         11   111233333333             6


Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ++++++|||.+||++||.+|+|+.|||+||||+.+
T Consensus       301 ~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          301 CNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             CCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence            78999999999999999999999999999999873

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.38  E-value=4.6e-13  Score=112.81  Aligned_cols=89  Identities=29%  Similarity=0.576  Sum_probs=76.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      +|||++|+++|.+.+..+++..|+..+|.+....|+.....+       ......+......+++++.+||.+||.+||.
T Consensus       191 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  270 (288)
T 1ob3_A          191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPN  270 (288)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTT
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcc
Confidence            589999999999999999999999999999888887555443       2233445566677899999999999999999


Q ss_pred             CCCCHHHHHcCccccC
Q 042950           74 KRPTAAEALQHLFFKR   89 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~   89 (216)
                      +|+|+.|+|+||||++
T Consensus       271 ~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          271 QRITAKQALEHAYFKE  286 (288)
T ss_dssp             TSCCHHHHHTSGGGGC
T ss_pred             cCCCHHHHhcCcchhh
Confidence            9999999999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.38  E-value=6.3e-13  Score=114.95  Aligned_cols=92  Identities=28%  Similarity=0.438  Sum_probs=74.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc------cccCCCccccCCC----CCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA------MLSGVNLSELMPS----ASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~------~~~~~~l~~~~~~----~s~~~~dLL~~mL~~   70 (216)
                      ||||++|+++|.+.+..+++..|+..+|.+..+.|.......      ......+...+..    .++++.+||.+||.+
T Consensus       222 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  301 (360)
T 3e3p_A          222 FAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQY  301 (360)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCS
T ss_pred             HHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhcc
Confidence            589999999999999999999999999999988886543211      2233344444433    578999999999999


Q ss_pred             CCCCCCCHHHHHcCccccCCCC
Q 042950           71 DPCKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF~~~~~   92 (216)
                      ||.+|+|+.|+|+||||++...
T Consensus       302 dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          302 LPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             SGGGSCCHHHHTTSGGGGGGGC
T ss_pred             CccccCCHHHHhcCccccccCC
Confidence            9999999999999999998543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.38  E-value=3.2e-13  Score=116.07  Aligned_cols=92  Identities=28%  Similarity=0.441  Sum_probs=76.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      ||||++|+++|.+.+..+++..|+.++|.|....|+......        ......+....+.+++++.+||.+||.+||
T Consensus       191 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  270 (324)
T 3mtl_A          191 FYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEG  270 (324)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCc
Confidence            589999999999999999999999999999988887543322        222233334456689999999999999999


Q ss_pred             CCCCCHHHHHcCccccCCCC
Q 042950           73 CKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~~~   92 (216)
                      .+|+|+.|+|+||||.+...
T Consensus       271 ~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          271 RNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             GGSCCHHHHTTSGGGGGGCS
T ss_pred             ccCCCHHHHhcChhhhhccc
Confidence            99999999999999998543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.37  E-value=2.2e-13  Score=115.73  Aligned_cols=90  Identities=28%  Similarity=0.519  Sum_probs=73.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-----cccCCCccccCCCCCHHHHHHHHhccccCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-----MLSGVNLSELMPSASKDAINLIESLCSWDPCKR   75 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-----~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR   75 (216)
                      +|||++|+++|.+.+..+++..|++.+|.+....|+....++     ......+..+.+.+++++.+||.+||.+||.+|
T Consensus       209 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  288 (308)
T 3g33_A          209 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKR  288 (308)
T ss_dssp             HHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccC
Confidence            589999999999999999999999999999888876443332     223344555667789999999999999999999


Q ss_pred             CCHHHHHcCccccCC
Q 042950           76 PTAAEALQHLFFKRC   90 (216)
Q Consensus        76 ~ta~eaL~HpfF~~~   90 (216)
                      +|+.|+|+||||+..
T Consensus       289 ~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          289 ISAFRALQHSYLHKD  303 (308)
T ss_dssp             CCHHHHHTSTTC---
T ss_pred             CCHHHHhcCccccCC
Confidence            999999999999873

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.37  E-value=2.2e-13  Score=123.64  Aligned_cols=89  Identities=27%  Similarity=0.466  Sum_probs=70.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh--------hccccCCCccccCCCC------------CHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR--------QAMLSGVNLSELMPSA------------SKDA   60 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~--------~~~~~~~~l~~~~~~~------------s~~~   60 (216)
                      ||||++|+++|.|.+..+++.+|++.+|.|..+.|.....        .+......+...++..            ++++
T Consensus       253 l~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  332 (464)
T 3ttj_A          253 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA  332 (464)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHH
Confidence            5899999999999999999999999999999887643211        1122333333333321            5789


Q ss_pred             HHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           61 INLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        61 ~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      +|||.+||++||.+|+|++|||+||||+.
T Consensus       333 ~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          333 RDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            99999999999999999999999999986

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.37  E-value=5.5e-13  Score=112.29  Aligned_cols=97  Identities=30%  Similarity=0.560  Sum_probs=78.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccc-------cCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~-------~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      +|||++|+.+|.+.+..+++..|++.+|.+....|+.....+..       ....+....+.++.++.+||.+||.+||.
T Consensus       194 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  273 (299)
T 2r3i_A          194 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPN  273 (299)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTT
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcc
Confidence            57999999999999999999999999999888877655444321       12233344556889999999999999999


Q ss_pred             CCCCHHHHHcCccccCCCCCCCCC
Q 042950           74 KRPTAAEALQHLFFKRCLYAPPHI   97 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~~~~~~~~   97 (216)
                      +|+|+.++|+||||++.....+.+
T Consensus       274 ~Rpt~~~~l~hp~~~~~~~~~~~~  297 (299)
T 2r3i_A          274 KRISAKAALAHPFFQDVTKPVPHL  297 (299)
T ss_dssp             TSCCHHHHHTSGGGTTCCCCCCCC
T ss_pred             cCCCHHHHhcChhhhcCCCCCCCC
Confidence            999999999999999866555444

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.37  E-value=5.7e-13  Score=116.22  Aligned_cols=90  Identities=27%  Similarity=0.526  Sum_probs=77.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh---------hccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR---------QAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~---------~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ||||++|+++|.+.+..+++..|+.++|.|..+.|.....         .+......+..+++.+++++.+||.+||.+|
T Consensus       222 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  301 (364)
T 3qyz_A          222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN  301 (364)
T ss_dssp             HHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999999887754322         2234455667777889999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.|+|+||||++.
T Consensus       302 P~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          302 PHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             TTTSCCHHHHHTSGGGTTT
T ss_pred             hhhCCCHHHHhcCcchhhc
Confidence            9999999999999999984

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.36  E-value=2.4e-13  Score=117.02  Aligned_cols=94  Identities=31%  Similarity=0.576  Sum_probs=75.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccc-------cCCCccccCC-CCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELMP-SASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~-------~~~~l~~~~~-~~s~~~~dLL~~mL~~dP   72 (216)
                      ||||++|+++|.+.++.+++..|+..+|.|....|+.....+.+       ....+...+. .+++++.+||.+||.+||
T Consensus       228 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  307 (329)
T 3gbz_A          228 WAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDP  307 (329)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSG
T ss_pred             HHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCCh
Confidence            58999999999999999999999999999988887655444311       1111221122 268899999999999999


Q ss_pred             CCCCCHHHHHcCccccCCCCCC
Q 042950           73 CKRPTAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~~~~~   94 (216)
                      .+|+|+.|+|+||||++..|.|
T Consensus       308 ~~R~t~~e~l~hp~f~~~~~~P  329 (329)
T 3gbz_A          308 VKRISAKNALEHPYFSHNDFDP  329 (329)
T ss_dssp             GGSCCHHHHHTSGGGSSSCSCC
T ss_pred             hhCCCHHHHhCCcccCCCCCCC
Confidence            9999999999999999977654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.35  E-value=5.6e-13  Score=115.52  Aligned_cols=94  Identities=32%  Similarity=0.603  Sum_probs=78.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc------cccCCCccccCCCCCHHHHHHHHhccccCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA------MLSGVNLSELMPSASKDAINLIESLCSWDPCK   74 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k   74 (216)
                      ||||++|.++|.+.+..+++..|++.+|.+..+.|+....++      .....++..++..++.++.+||.+||.+||.+
T Consensus       203 l~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  282 (346)
T 1ua2_A          203 LAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA  282 (346)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTT
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhh
Confidence            589999999999999999999999999999988887655544      22233445556778999999999999999999


Q ss_pred             CCCHHHHHcCccccCCCCCC
Q 042950           75 RPTAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        75 R~ta~eaL~HpfF~~~~~~~   94 (216)
                      |+|+.|+|+||||++.....
T Consensus       283 Rpt~~ell~h~~f~~~~~~~  302 (346)
T 1ua2_A          283 RITATQALKMKYFSNRPGPT  302 (346)
T ss_dssp             SCCHHHHHTSGGGTSSSCCC
T ss_pred             CCCHHHHhcChhhhcCCCCC
Confidence            99999999999999855443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.31  E-value=6.7e-13  Score=113.68  Aligned_cols=92  Identities=24%  Similarity=0.460  Sum_probs=74.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcccc-------CCCccc-----cCCCCCHHHHHHHHhcc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS-------GVNLSE-----LMPSASKDAINLIESLC   68 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~-------~~~l~~-----~~~~~s~~~~dLL~~mL   68 (216)
                      +|||++|+++|.+.+..+++..|++.+|.+....|+....++...       ...+..     ....++.++.+||.+||
T Consensus       199 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  278 (317)
T 2pmi_A          199 LAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLL  278 (317)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHS
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHC
Confidence            589999999999999999999999999999988887655544221       111111     11247889999999999


Q ss_pred             ccCCCCCCCHHHHHcCccccCCCC
Q 042950           69 SWDPCKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        69 ~~dP~kR~ta~eaL~HpfF~~~~~   92 (216)
                      .+||.+|+|+.|+|+||||+++..
T Consensus       279 ~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          279 QLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             CSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             CCCcccCCCHHHHhCChhhhcccc
Confidence            999999999999999999998543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.29  E-value=1.2e-12  Score=115.84  Aligned_cols=93  Identities=28%  Similarity=0.458  Sum_probs=70.7

Q ss_pred             CcccccCCCCCCCCCH---------HHHHHHHHHhhCCCCHHHHHHHHhhc------------cccCCCcc----ccCCC
Q 042950            1 MAELLLFRPLFQGTDE---------AEQMYKICSVLGNPTMDSWADELRQA------------MLSGVNLS----ELMPS   55 (216)
Q Consensus         1 L~ELltG~plF~g~s~---------~dql~~I~~ilG~p~~~~~~~~~~~~------------~~~~~~l~----~~~~~   55 (216)
                      ||||++|+++|.+.++         .+++..|++++|.|....|.....++            .+....+.    .....
T Consensus       226 l~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (405)
T 3rgf_A          226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVK  305 (405)
T ss_dssp             HHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCC
T ss_pred             HHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCC
Confidence            5899999999988765         58999999999999998887654433            01111111    11123


Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCCCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYA   93 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~~~   93 (216)
                      .++++++||.+||.+||.+|+|+.|||+||||.+....
T Consensus       306 ~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~  343 (405)
T 3rgf_A          306 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLP  343 (405)
T ss_dssp             TTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCC
T ss_pred             CCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCC
Confidence            47899999999999999999999999999999985443

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.29  E-value=2.4e-12  Score=108.42  Aligned_cols=90  Identities=31%  Similarity=0.550  Sum_probs=74.1

Q ss_pred             CcccccCC-CCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcccc-------CCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFR-PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLS-------GVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~-plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~-------~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|. |+|.+.+..+++..|+..+|.+....|......+...       ...+....+.++.++.+||.+||.+||
T Consensus       192 l~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  271 (292)
T 3o0g_A          192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP  271 (292)
T ss_dssp             HHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSG
T ss_pred             HHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccCh
Confidence            47899655 6688999999999999999999999888766654221       223444556789999999999999999


Q ss_pred             CCCCCHHHHHcCccccCC
Q 042950           73 CKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~   90 (216)
                      .+|+|++|+|+||||++.
T Consensus       272 ~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          272 VQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             GGSCCHHHHHTSGGGTTC
T ss_pred             hhCCCHHHHhcCcccccC
Confidence            999999999999999973

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.28  E-value=4.4e-12  Score=108.03  Aligned_cols=93  Identities=25%  Similarity=0.468  Sum_probs=76.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-----cccCCCccccCCCCCHHHHHHHHhccccCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-----MLSGVNLSELMPSASKDAINLIESLCSWDPCKR   75 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-----~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR   75 (216)
                      ||||++|+++|.+.+..+++..|++.+|.+....|......+     ......+..+...++.++.+||.+||.+||.+|
T Consensus       209 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  288 (326)
T 1blx_A          209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR  288 (326)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTS
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccC
Confidence            579999999999999999999999999999888876433322     122334555667789999999999999999999


Q ss_pred             CCHHHHHcCccccCCCCC
Q 042950           76 PTAAEALQHLFFKRCLYA   93 (216)
Q Consensus        76 ~ta~eaL~HpfF~~~~~~   93 (216)
                      +|+.|+|+||||++....
T Consensus       289 pt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          289 ISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             CCHHHHHTSGGGTTCCCC
T ss_pred             CCHHHHhcCccccccchh
Confidence            999999999999985443

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.26  E-value=5.2e-12  Score=113.20  Aligned_cols=90  Identities=26%  Similarity=0.423  Sum_probs=68.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc------cc------------------------------
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA------ML------------------------------   44 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~------~~------------------------------   44 (216)
                      ||||++|+++|.+.++.+++..|++.+|.|+...+.......      ..                              
T Consensus       289 l~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (429)
T 3kvw_A          289 LAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPP  368 (429)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECST
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCc
Confidence            589999999999999999999999999999988765322111      00                              


Q ss_pred             cCCCccccCC-CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           45 SGVNLSELMP-SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        45 ~~~~l~~~~~-~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ....|...+. ..++++++||.+||++||.+|+|+.|||+||||+..
T Consensus       369 ~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          369 ESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             TCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             cchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence            0011111122 247889999999999999999999999999999974

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.26  E-value=5.3e-12  Score=110.58  Aligned_cols=90  Identities=34%  Similarity=0.451  Sum_probs=74.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHH---------HhhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADE---------LRQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~---------~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ||||++|+++|.+.+..+++..|++.+|.+..+.+...         ..++......+..+++.+++++.+||.+||.+|
T Consensus       232 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  311 (371)
T 4exu_A          232 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD  311 (371)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSC
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCC
Confidence            58999999999999999999999999999887665321         112233444555666778999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.|+|+||||+.+
T Consensus       312 P~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          312 VDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             TTTSCCHHHHHTSGGGTTT
T ss_pred             hhhcCCHHHHhcCcccccC
Confidence            9999999999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.23  E-value=1.1e-11  Score=107.31  Aligned_cols=90  Identities=34%  Similarity=0.451  Sum_probs=75.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHH---------HhhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADE---------LRQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~---------~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ||||++|+++|.+.+..+++..|++.+|.+..+.+...         ..++......+..+++.+++++.+||.+||.+|
T Consensus       214 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  293 (353)
T 3coi_A          214 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD  293 (353)
T ss_dssp             HHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSC
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999887665422         112233445566667788999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+|+.++|+||||+..
T Consensus       294 p~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          294 VDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             TTTSCCHHHHHTSGGGTTT
T ss_pred             cccCCCHHHHhcCcchhhc
Confidence            9999999999999999874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.23  E-value=1.8e-11  Score=103.72  Aligned_cols=92  Identities=26%  Similarity=0.334  Sum_probs=72.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccc---------cCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML---------SGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~---------~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|+++|.+.+..+++..+.+.+|......+.........         ....+...++.++.++.+||.+||.+|
T Consensus       193 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  272 (311)
T 4agu_A          193 FAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMD  272 (311)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCC
Confidence            57999999999999999999999999998776655433322211         111223345678999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCCCC
Q 042950           72 PCKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~~~   92 (216)
                      |.+|||+.|+|+||||+++..
T Consensus       273 P~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          273 PTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             TTTSCCHHHHHTSGGGTTCC-
T ss_pred             hhhcCCHHHHhcChHHHhccC
Confidence            999999999999999998543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.22  E-value=6.4e-12  Score=110.38  Aligned_cols=90  Identities=30%  Similarity=0.429  Sum_probs=65.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhh----ccccCCCc--------------------cccCC--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQ----AMLSGVNL--------------------SELMP--   54 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~----~~~~~~~l--------------------~~~~~--   54 (216)
                      ||||++|+++|.+.+..+++..|+..+|.++...+......    .......|                    ...+.  
T Consensus       248 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  327 (382)
T 2vx3_A          248 LVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVE  327 (382)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTT
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhcc
Confidence            58999999999999999999999999999887766421110    00000000                    00000  


Q ss_pred             ----------------CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 ----------------SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ----------------~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                                      ..++++++||.+||++||.+|||+.|||+||||++.
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          328 TGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             ccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                            001478999999999999999999999999999873

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.21  E-value=2.6e-11  Score=104.43  Aligned_cols=92  Identities=32%  Similarity=0.526  Sum_probs=73.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHH---------H-HHHhhccccCCCccccCCCCCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSW---------A-DELRQAMLSGVNLSELMPSASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~---------~-~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~   70 (216)
                      ||||++|+++|.+.+..+++..|+.++|.|.....         . ....++......+...++.+++++.+||.+||.+
T Consensus       213 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  292 (353)
T 2b9h_A          213 LAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVF  292 (353)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCc
Confidence            57999999999999999999999999998763211         1 1112223344455666678899999999999999


Q ss_pred             CCCCCCCHHHHHcCccccCCCC
Q 042950           71 DPCKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF~~~~~   92 (216)
                      ||.+|+|+.|+|+||||+....
T Consensus       293 dP~~Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          293 DPAKRITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             SGGGSCCHHHHHTSGGGTTTCC
T ss_pred             CcccCCCHHHHhcCccccccCC
Confidence            9999999999999999998543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.21  E-value=1.2e-11  Score=107.19  Aligned_cols=90  Identities=26%  Similarity=0.462  Sum_probs=74.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc----------cccCCCccccCCCCCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA----------MLSGVNLSELMPSASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~----------~~~~~~l~~~~~~~s~~~~dLL~~mL~~   70 (216)
                      +|||++|+++|.+.+..+++..|+..+|.+....+.......          ......+....+..++++.+||.+||.+
T Consensus       224 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  303 (362)
T 3pg1_A          224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF  303 (362)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcC
Confidence            579999999999999999999999999999877664322111          2233445555667899999999999999


Q ss_pred             CCCCCCCHHHHHcCccccCC
Q 042950           71 DPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ||.+|+|+.|+|+||||+++
T Consensus       304 dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          304 NPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             SGGGSCCHHHHHTSGGGTTT
T ss_pred             ChhhCCCHHHHHcCchhhhc
Confidence            99999999999999999984

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.21  E-value=6.7e-12  Score=116.99  Aligned_cols=75  Identities=24%  Similarity=0.216  Sum_probs=63.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+++..|...........|                  ..+++++.|||.+||++||.+|+|+.|
T Consensus       346 lyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~dli~~~L~~dp~~R~t~~e  407 (573)
T 3uto_A          346 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF------------------SGISEDGKDFIRKLLLADPNTRMTIHQ  407 (573)
T ss_dssp             HHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGG------------------TTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccc------------------cCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            58999999999999999999999775444333332                  468999999999999999999999999


Q ss_pred             HHcCccccCCCCC
Q 042950           81 ALQHLFFKRCLYA   93 (216)
Q Consensus        81 aL~HpfF~~~~~~   93 (216)
                      ||+||||+...+.
T Consensus       408 ~l~Hpw~~~~~~~  420 (573)
T 3uto_A          408 ALEHPWLTPGNAP  420 (573)
T ss_dssp             HHHSTTTSCCCCT
T ss_pred             HhcCcCcCCCCCC
Confidence            9999999985543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.21  E-value=1.4e-11  Score=104.10  Aligned_cols=93  Identities=28%  Similarity=0.425  Sum_probs=75.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      ||||++|+++|.+.+..+++..|+..++.+....+.......        ......+....+.++.++.+||.+||..||
T Consensus       215 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  294 (320)
T 2i6l_A          215 FAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSP  294 (320)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCc
Confidence            589999999999999999999999988888777766543321        223344555567789999999999999999


Q ss_pred             CCCCCHHHHHcCccccCCCCC
Q 042950           73 CKRPTAAEALQHLFFKRCLYA   93 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~~~~~   93 (216)
                      .+|+|+.|+|+||||+...+.
T Consensus       295 ~~Rpt~~ell~hp~~~~~~~p  315 (320)
T 2i6l_A          295 MDRLTAEEALSHPYMSIYSFP  315 (320)
T ss_dssp             GGSCCHHHHHTSHHHHTTCC-
T ss_pred             cccCCHHHHhCCcccccccCc
Confidence            999999999999999985443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.20  E-value=8.3e-12  Score=109.84  Aligned_cols=71  Identities=25%  Similarity=0.377  Sum_probs=58.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+..|..... +....                  ...+++++.|||.+||+.||++|+|+.|
T Consensus       260 lyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~------------------~~~~s~~~~dli~~~L~~dP~~R~ta~e  320 (346)
T 4fih_A          260 VIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKN------------------LHKVSPSLKGFLDRLLVRDPAQRATAAE  320 (346)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCSC------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCc------------------cccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            5899999999999999998888866321 11111                  1357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       321 ~l~Hp~~~~~  330 (346)
T 4fih_A          321 LLKHPFLAKA  330 (346)
T ss_dssp             HTTCGGGGGC
T ss_pred             HhcCHhhcCC
Confidence            9999999873

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.20  E-value=8.3e-12  Score=108.34  Aligned_cols=74  Identities=24%  Similarity=0.248  Sum_probs=61.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+.+|++  +.+.                    +-..+++++.|||.+||+.||.+|+|++|
T Consensus       224 lyeml~G~~PF~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~dli~~lL~~dp~~R~t~~e  281 (311)
T 4aw0_A          224 IYQLVAGLPPFRAGNEGLIFAKIIK--LEYD--------------------FPEKFFPKARDLVEKLLVLDATKRLGCEE  281 (311)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--TCCC--------------------CCTTCCHHHHHHHHHHSCSSGGGSTTSGG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHc--CCCC--------------------CCcccCHHHHHHHHHHccCCHhHCcChHH
Confidence            5899999999999999999888876  3221                    11247899999999999999999999887


Q ss_pred             ------HHcCccccCCCCCCCC
Q 042950           81 ------ALQHLFFKRCLYAPPH   96 (216)
Q Consensus        81 ------aL~HpfF~~~~~~~~~   96 (216)
                            +++||||+++.|....
T Consensus       282 ~~~~~~i~~Hp~F~~idw~~l~  303 (311)
T 4aw0_A          282 MEGYGPLKAHPFFESVTWENLH  303 (311)
T ss_dssp             GTCHHHHHTSGGGTTCCCTTGG
T ss_pred             HcCCHHHHCCCCcCCCCHHHhc
Confidence                  5899999998887643

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.20  E-value=1.8e-11  Score=105.84  Aligned_cols=90  Identities=28%  Similarity=0.417  Sum_probs=69.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCcccc--------CC--CCCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSEL--------MP--SASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~--------~~--~~s~~~~dLL~~mL~~   70 (216)
                      ||||++|+++|.+.+..+++..|..++|.+....|+............+...        +.  ..++++.+||.+||.+
T Consensus       219 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  298 (351)
T 3mi9_A          219 MAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL  298 (351)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCS
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcC
Confidence            5899999999999999999999999999988877765433321111111000        00  1378899999999999


Q ss_pred             CCCCCCCHHHHHcCccccCC
Q 042950           71 DPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ||.+|+|+.|+|+||||.+.
T Consensus       299 dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          299 DPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             SGGGSCCHHHHHTSGGGGSS
T ss_pred             ChhhCCCHHHHhCCCCcCCC
Confidence            99999999999999999874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.18  E-value=8.8e-12  Score=107.81  Aligned_cols=73  Identities=27%  Similarity=0.298  Sum_probs=60.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|++||.+.+..+.+.+|++  +.+.                    +...+++++.+||.+||+.||++|+|   
T Consensus       216 lyemltG~~PF~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~~li~~~L~~dP~~R~ta~~  273 (304)
T 3ubd_A          216 MFEMLTGTLPFQGKDRKETMTMILK--AKLG--------------------MPQFLSPEAQSLLRMLFKRNPANRLGAGP  273 (304)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--CCCC--------------------CCTTSCHHHHHHHHHHTCSSGGGSTTCST
T ss_pred             HHHHHhCCCCCCCcCHHHHHHHHHc--CCCC--------------------CCCcCCHHHHHHHHHHcccCHHHCCCCCc
Confidence            5899999999999999999998876  3221                    11247899999999999999999998   


Q ss_pred             --HHHHHcCccccCCCCCCC
Q 042950           78 --AAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~~   95 (216)
                        ++|+|+||||+++.|...
T Consensus       274 ~~~~eil~Hp~f~~idw~~l  293 (304)
T 3ubd_A          274 DGVEEIKRHSFFSTIDWNKL  293 (304)
T ss_dssp             TTHHHHHTSGGGTTCCHHHH
T ss_pred             CCHHHHHcCccccCCCHHHH
Confidence              489999999999776543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.17  E-value=5.4e-12  Score=110.53  Aligned_cols=90  Identities=28%  Similarity=0.412  Sum_probs=68.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHh--------hccccCCCccccCCC------------CCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR--------QAMLSGVNLSELMPS------------ASKDA   60 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~--------~~~~~~~~l~~~~~~------------~s~~~   60 (216)
                      ||||++|+++|.+.+..+++..|++.+|.|..+.+.....        .+......+...++.            .+.++
T Consensus       216 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (371)
T 2xrw_A          216 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA  295 (371)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHH
Confidence            5899999999999999999999999999998876643211        112222223322221            15688


Q ss_pred             HHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           61 INLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        61 ~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+||.+||.+||.+|+|+.|+|+||||+..
T Consensus       296 ~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          296 RDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            999999999999999999999999999863

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.15  E-value=3.2e-11  Score=108.77  Aligned_cols=70  Identities=26%  Similarity=0.365  Sum_probs=58.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..|....- +..                  .....+++++.|||.+||+.||.+|+||.|
T Consensus       337 lyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~------------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e  397 (423)
T 4fie_A          337 VIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRL------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAE  397 (423)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCC------------------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCC------------------cccccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            5899999999999999998888866321 111                  112358999999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       398 ll~Hp~~~~  406 (423)
T 4fie_A          398 LLKHPFLAK  406 (423)
T ss_dssp             HTTCGGGGG
T ss_pred             HhcCHHhcC
Confidence            999999987

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.15  E-value=1.8e-11  Score=105.07  Aligned_cols=89  Identities=31%  Similarity=0.470  Sum_probs=72.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccC---------CCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSG---------VNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~---------~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ||||++|+++|.+.++.+++..|+..+|......+......+....         ..+...++.+++++.+||.+||.+|
T Consensus       215 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  294 (331)
T 4aaa_A          215 VTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID  294 (331)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccC
Confidence            5899999999999999999999999999887766654444332222         2233344568899999999999999


Q ss_pred             CCCCCCHHHHHcCccccC
Q 042950           72 PCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~   89 (216)
                      |.+|||+.|+|+||||+.
T Consensus       295 P~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          295 PDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             GGGSCCGGGGGGSHHHHG
T ss_pred             cccCCCHHHHhcCchhcc
Confidence            999999999999999986

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.14  E-value=1.5e-11  Score=104.91  Aligned_cols=67  Identities=25%  Similarity=0.234  Sum_probs=56.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+..|.+  +.+.                    +-..+++++.+||.+||+.||.+|+|+.|
T Consensus       202 ly~lltg~~PF~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~~li~~~L~~dP~~R~s~~e  259 (275)
T 3hyh_A          202 LYVMLCRRLPFDDESIPVLFKNISN--GVYT--------------------LPKFLSPGAAGLIKRMLIVNPLNRISIHE  259 (275)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--TCCC--------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHc--CCCC--------------------CCCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            5899999999999888877777765  3221                    11247899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       260 il~hpw~k~  268 (275)
T 3hyh_A          260 IMQDDWFKV  268 (275)
T ss_dssp             HHHCHHHHT
T ss_pred             HHcCccccc
Confidence            999999975

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.12  E-value=5e-11  Score=101.72  Aligned_cols=91  Identities=24%  Similarity=0.441  Sum_probs=66.1

Q ss_pred             CcccccCCCCC-CCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc----------cccCCCccccCC-----CCCHHHHHHH
Q 042950            1 MAELLLFRPLF-QGTDEAEQMYKICSVLGNPTMDSWADELRQA----------MLSGVNLSELMP-----SASKDAINLI   64 (216)
Q Consensus         1 L~ELltG~plF-~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~----------~~~~~~l~~~~~-----~~s~~~~dLL   64 (216)
                      ||||++|+.+| .+.+..+++..|...+|.+....+.......          ......+..++.     .+++++.+||
T Consensus       221 l~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  300 (330)
T 3nsz_A          221 LASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL  300 (330)
T ss_dssp             HHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHH
T ss_pred             HHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHH
Confidence            57999999776 6788899999999999864433332211111          122223333332     2689999999


Q ss_pred             HhccccCCCCCCCHHHHHcCccccCCC
Q 042950           65 ESLCSWDPCKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        65 ~~mL~~dP~kR~ta~eaL~HpfF~~~~   91 (216)
                      .+||.+||.+|+|++|+|+||||+++.
T Consensus       301 ~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          301 DKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             HTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             HHHhcCCcccCCCHHHHhcCccHhhhc
Confidence            999999999999999999999999853

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.10  E-value=5.2e-11  Score=104.88  Aligned_cols=68  Identities=24%  Similarity=0.329  Sum_probs=58.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+.+|+.  +..+                   .+...+++++.+||.+||+.||.+|+|+.|
T Consensus       215 lyemltG~~PF~~~~~~~~~~~i~~--~~~~-------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e  273 (350)
T 4b9d_A          215 LYELCTLKHAFEAGSMKNLVLKIIS--GSFP-------------------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNS  273 (350)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHH--TCCC-------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCcCHHHHHHHHHc--CCCC-------------------CCCccCCHHHHHHHHHHccCChhHCcCHHH
Confidence            5899999999999999999998876  3211                   112357899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       274 ~l~hp~~~~  282 (350)
T 4b9d_A          274 ILEKGFIAK  282 (350)
T ss_dssp             HHTSHHHHT
T ss_pred             HhcCHHhhc
Confidence            999999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.09  E-value=4.3e-11  Score=102.78  Aligned_cols=70  Identities=20%  Similarity=0.253  Sum_probs=53.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+...++..++.- |..+...                  -...++++.+||.+||..||.+|+|+.|
T Consensus       219 lyelltg~~Pf~~~~~~~~~~~~i~~-~~~~~~~------------------~~~~~~~~~~li~~~L~~dP~~R~s~~e  279 (290)
T 3fpq_A          219 MLEMATSEYPYSECQNAAQIYRRVTS-GVKPASF------------------DKVAIPEVKEIIEGCIRQNKDERYSIKD  279 (290)
T ss_dssp             HHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCGGG------------------GGCCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCCCcHHHHHHHHHc-CCCCCCC------------------CccCCHHHHHHHHHHccCChhHCcCHHH
Confidence            58999999999887766666555432 2211111                  1246789999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       280 ~l~Hp~~~~  288 (290)
T 3fpq_A          280 LLNHAFFQE  288 (290)
T ss_dssp             HHTSGGGC-
T ss_pred             HhcCccccC
Confidence            999999986

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.09  E-value=1.3e-10  Score=100.55  Aligned_cols=88  Identities=20%  Similarity=0.254  Sum_probs=66.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc---cccCCCccccC---------------------CCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA---MLSGVNLSELM---------------------PSA   56 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~---~~~~~~l~~~~---------------------~~~   56 (216)
                      ||||++|+++|.+.+..+.+..|..+++.++...+.......   ......+...+                     ...
T Consensus       249 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  328 (360)
T 3llt_A          249 LAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIK  328 (360)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCC
T ss_pred             HHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccch
Confidence            589999999999999999999999999988877765443221   00000000000                     113


Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcCcccc
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQHLFFK   88 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~   88 (216)
                      ++++.+||.+||.+||.+|||+.|+|+||||+
T Consensus       329 ~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          329 HELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            47788999999999999999999999999995

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.09  E-value=8.4e-11  Score=103.27  Aligned_cols=72  Identities=25%  Similarity=0.218  Sum_probs=62.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|.++|.+.+..+.+..|...........|                  ..+++++.+||.+||..||.+|+|+.|
T Consensus       208 l~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dP~~R~t~~e  269 (361)
T 2yab_A          208 TYILLSGASPFLGDTKQETLANITAVSYDFDEEFF------------------SQTSELAKDFIRKLLVKETRKRLTIQE  269 (361)
T ss_dssp             HHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHH------------------TTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhc------------------cCCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            58999999999999998888888775554444444                  357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       270 ~l~hp~~~~~  279 (361)
T 2yab_A          270 ALRHPWITPV  279 (361)
T ss_dssp             HHTSTTTSCS
T ss_pred             HhcCcCcCCC
Confidence            9999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.06  E-value=2.5e-10  Score=99.36  Aligned_cols=89  Identities=19%  Similarity=0.210  Sum_probs=64.6

Q ss_pred             CcccccCCCCCCCCC------HHHHHHHHHHhhCCCCHHHHHHHHhhcc-cc-CCCcc---c---------------cCC
Q 042950            1 MAELLLFRPLFQGTD------EAEQMYKICSVLGNPTMDSWADELRQAM-LS-GVNLS---E---------------LMP   54 (216)
Q Consensus         1 L~ELltG~plF~g~s------~~dql~~I~~ilG~p~~~~~~~~~~~~~-~~-~~~l~---~---------------~~~   54 (216)
                      ||||++|+++|.+.+      +.+++..|++++|.++...+........ +. ...+.   .               +-.
T Consensus       283 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (397)
T 1wak_A          283 AFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQ  362 (397)
T ss_dssp             HHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCH
T ss_pred             HHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccch
Confidence            589999999998765      6789999999999988776643221110 00 00000   0               001


Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ..+.++.+||.+||.+||.+|+|+.|+|+||||++
T Consensus       363 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          363 EEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             hhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            13467889999999999999999999999999974

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.04  E-value=1.5e-10  Score=99.05  Aligned_cols=90  Identities=24%  Similarity=0.279  Sum_probs=67.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcc-------------------ccCCCccccCC---CCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM-------------------LSGVNLSELMP---SASK   58 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~-------------------~~~~~l~~~~~---~~s~   58 (216)
                      ||||++|+++|.+.+..+++..+.+++|.++...+........                   .....+.....   ..+.
T Consensus       229 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (355)
T 2eu9_A          229 LFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV  308 (355)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHH
Confidence            5899999999999999999999999999988776653221110                   00011111111   1245


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           59 DAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        59 ~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ++.+||.+||.+||.+|||+.|+|+||||+++
T Consensus       309 ~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          309 QLFDLMRRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence            78999999999999999999999999999984

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.03  E-value=1.7e-10  Score=98.02  Aligned_cols=90  Identities=26%  Similarity=0.349  Sum_probs=67.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhcc-------------------ccCCCccccC---CCCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM-------------------LSGVNLSELM---PSASK   58 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~-------------------~~~~~l~~~~---~~~s~   58 (216)
                      ||||++|+++|.+.+..+++..+..++|..+...+........                   .....+....   ...++
T Consensus       224 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (339)
T 1z57_A          224 LIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE  303 (339)
T ss_dssp             HHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHH
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHH
Confidence            5899999999999999999999999999888776653221110                   0001111111   12356


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           59 DAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        59 ~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ++.+||.+||.+||.+|||+.|+|+||||+.+
T Consensus       304 ~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          304 RLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             HHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence            78999999999999999999999999999974

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.03  E-value=1.2e-10  Score=104.21  Aligned_cols=103  Identities=23%  Similarity=0.186  Sum_probs=77.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCC--CCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCK--RPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k--R~ta   78 (216)
                      ||||++|++||.+.+..+.+.+|+.......                 +. ....++.++.+||.+||..+|.+  |+++
T Consensus       263 lyell~G~~Pf~~~~~~~~~~~i~~~~~~~~-----------------~p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~  324 (410)
T 3v8s_A          263 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLT-----------------FP-DDNDISKEAKNLICAFLTDREVRLGRNGV  324 (410)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC-----------------CC-TTCCCCHHHHHHHHHHSSCGGGCTTSSCH
T ss_pred             HHHHHhCCCCCCCCChhhHHHHHHhcccccc-----------------CC-CcccccHHHHHHHHHHccChhhhCCCCCH
Confidence            5899999999999999888888875321100                 00 01257899999999999999988  9999


Q ss_pred             HHHHcCccccCCCCCCCCCCCCcc-ccchhhhhhhhhccccCCc
Q 042950           79 AEALQHLFFKRCLYAPPHIRSVPA-VATTTRGMLKQQGAGIEAE  121 (216)
Q Consensus        79 ~eaL~HpfF~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  121 (216)
                      +|+++||||+.+.|.....+...+ +.+......+.+++..+..
T Consensus       325 ~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~~~~~~d~~~fd~~~~  368 (410)
T 3v8s_A          325 EEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEE  368 (410)
T ss_dssp             HHHHTSGGGCCSSCCSTTGGGSCCSCCCCCSSTTCCTTSCCCCS
T ss_pred             HHHhcCccccCCCHHHHhhcccCCCCCCcCCCccchhhcCCccc
Confidence            999999999999887666665443 5555666666666666554

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.02  E-value=1.6e-10  Score=99.38  Aligned_cols=71  Identities=23%  Similarity=0.224  Sum_probs=62.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..|...........|                  +.++.++.+||.+||..||.+|+|+.|
T Consensus       193 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dp~~Rpt~~e  254 (321)
T 1tki_A          193 VYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF------------------KEISIEAMDFVDRLLVKERKSRMTASE  254 (321)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH------------------TTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhh------------------ccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            58999999999999998889888876555555544                  357899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       255 ~l~hp~~~~  263 (321)
T 1tki_A          255 ALQHPWLKQ  263 (321)
T ss_dssp             HHHSHHHHS
T ss_pred             HhcChhhcc
Confidence            999999987

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.00  E-value=1.4e-09  Score=94.00  Aligned_cols=90  Identities=18%  Similarity=0.299  Sum_probs=62.7

Q ss_pred             CcccccCCCCCCCCC------HHHHHHHHHHhhCCCCHHHHHHHHhhc-cccC------------CCccc-------cCC
Q 042950            1 MAELLLFRPLFQGTD------EAEQMYKICSVLGNPTMDSWADELRQA-MLSG------------VNLSE-------LMP   54 (216)
Q Consensus         1 L~ELltG~plF~g~s------~~dql~~I~~ilG~p~~~~~~~~~~~~-~~~~------------~~l~~-------~~~   54 (216)
                      ||||++|+++|.+.+      +.+++..|++++|.++...+....... ....            ..+..       +..
T Consensus       225 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (373)
T 1q8y_A          225 IFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK  304 (373)
T ss_dssp             HHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCH
T ss_pred             HHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCc
Confidence            589999999998754      678899999999998877664322110 0000            00000       011


Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ..+.++.+||.+||.+||.+|||+.|+|+||||++.
T Consensus       305 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  340 (373)
T 1q8y_A          305 DEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  340 (373)
T ss_dssp             HHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             chHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence            245688999999999999999999999999999984

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.99  E-value=8.4e-11  Score=102.91  Aligned_cols=73  Identities=22%  Similarity=0.291  Sum_probs=60.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      ||||++|+++|.+.+..+.+..|+.  +...                    +-..+++++.+||.+||..||.+|+++  
T Consensus       214 l~ell~G~~Pf~~~~~~~~~~~i~~--~~~~--------------------~p~~~~~~~~~li~~lL~~dP~~R~~~~~  271 (353)
T 3txo_A          214 LYEMLCGHAPFEAENEDDLFEAILN--DEVV--------------------YPTWLHEDATGILKSFMTKNPTMRLGSLT  271 (353)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--CCCC--------------------CCTTSCHHHHHHHHHHTCSSGGGSTTSGG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHc--CCCC--------------------CCCCCCHHHHHHHHHHhhhCHHHccCCcc
Confidence            5899999999999999998888876  2211                    012378999999999999999999998  


Q ss_pred             ----HHHHcCccccCCCCCCC
Q 042950           79 ----AEALQHLFFKRCLYAPP   95 (216)
Q Consensus        79 ----~eaL~HpfF~~~~~~~~   95 (216)
                          .|+++||||+++.|...
T Consensus       272 ~~~~~~il~hp~f~~~~w~~l  292 (353)
T 3txo_A          272 QGGEHAILRHPFFKEIDWAQL  292 (353)
T ss_dssp             GTCTHHHHTSGGGTTCCHHHH
T ss_pred             cCCHHHHhhCCcccCCCHHHH
Confidence                99999999999876543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.99  E-value=3e-10  Score=97.52  Aligned_cols=77  Identities=29%  Similarity=0.335  Sum_probs=63.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..|..........                  .+..++.++.+||.+||.+||.+|||+.+
T Consensus       223 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~~  284 (327)
T 3lm5_A          223 AYMLLTHTSPFVGEDNQETYLNISQVNVDYSEE------------------TFSSVSQLATDFIQSLLVKNPEKRPTAEI  284 (327)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT------------------TTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCchHHHHHHHhcccccCch------------------hhcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence            579999999999999888888887755443322                  23467899999999999999999999999


Q ss_pred             HHcCccccCCCCCCC
Q 042950           81 ALQHLFFKRCLYAPP   95 (216)
Q Consensus        81 aL~HpfF~~~~~~~~   95 (216)
                      +|+||||+...+...
T Consensus       285 ll~h~~~~~~~~~~~  299 (327)
T 3lm5_A          285 CLSHSWLQQWDFENL  299 (327)
T ss_dssp             HTTCGGGCCCCTTCC
T ss_pred             HhCCHhhcccccccc
Confidence            999999998766544

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.97  E-value=2.1e-10  Score=100.90  Aligned_cols=72  Identities=24%  Similarity=0.237  Sum_probs=60.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+++..|+..........                  +..+++++.+||.+||.+||.+|+|+.|
T Consensus       278 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------~~~~~~~~~~li~~~L~~dp~~Rps~~e  339 (373)
T 2x4f_A          278 AYMLLSGLSPFLGDNDAETLNNILACRWDLEDEE------------------FQDISEEAKEFISKLLIKEKSWRISASE  339 (373)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGG------------------GTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhh------------------hccCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            5899999999999999999999887543332222                  2457899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||++.
T Consensus       340 ~l~hp~~~~~  349 (373)
T 2x4f_A          340 ALKHPWLSDH  349 (373)
T ss_dssp             HHHSHHHHCH
T ss_pred             HhcCcCcCCC
Confidence            9999999973

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.95  E-value=5.7e-10  Score=95.93  Aligned_cols=71  Identities=27%  Similarity=0.254  Sum_probs=60.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..|...........|                  ...+.++.+||.+||..||.+|||+.|
T Consensus       207 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~Rpt~~e  268 (326)
T 2y0a_A          207 TYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF------------------SNTSALAKDFIRRLLVKDPKKRMTIQD  268 (326)
T ss_dssp             HHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHH------------------TTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCcccc------------------ccCCHHHHHHHHHHccCChhhCCCHHH
Confidence            58999999999999988888888765444333333                  357899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       269 ~l~hp~~~~  277 (326)
T 2y0a_A          269 SLQHPWIKP  277 (326)
T ss_dssp             HHHSTTTSC
T ss_pred             HhcCCCccC
Confidence            999999986

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.94  E-value=4.6e-10  Score=101.24  Aligned_cols=78  Identities=19%  Similarity=0.181  Sum_probs=63.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCC--CCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCK--RPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k--R~ta   78 (216)
                      ||||++|++||.+.+..+.+.+|+...+.                 ..+......+++++.+||.+||..+|.+  |+++
T Consensus       271 l~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~  333 (437)
T 4aw2_A          271 MYEMLYGETPFYAESLVETYGKIMNHKER-----------------FQFPTQVTDVSENAKDLIRRLICSREHRLGQNGI  333 (437)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTHHHH-----------------CCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTT
T ss_pred             HHHHHhCCCCCCCCChhHHHHhhhhcccc-----------------ccCCcccccCCHHHHHHHHHHhcccccccCCCCH
Confidence            58999999999999998888888653211                 1122223458999999999999999998  9999


Q ss_pred             HHHHcCccccCCCCCCC
Q 042950           79 AEALQHLFFKRCLYAPP   95 (216)
Q Consensus        79 ~eaL~HpfF~~~~~~~~   95 (216)
                      +|+++||||+.+.|...
T Consensus       334 ~eil~Hpff~~i~w~~l  350 (437)
T 4aw2_A          334 EDFKKHPFFSGIDWDNI  350 (437)
T ss_dssp             HHHHTSGGGTTCCTTTG
T ss_pred             HHHhCCCccCCCCHHHH
Confidence            99999999999988765

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.93  E-value=6.3e-10  Score=92.56  Aligned_cols=71  Identities=31%  Similarity=0.366  Sum_probs=61.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+..+.+..+.......+...|                  ..+++++.+||.+||.+||.+|+|+.+
T Consensus       197 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~li~~~l~~dp~~R~s~~~  258 (277)
T 3f3z_A          197 MYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDW------------------LNVSPQAESLIRRLLTKSPKQRITSLQ  258 (277)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH------------------TTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhh------------------hcCCHHHHHHHHHHccCChhhCcCHHH
Confidence            47999999999999988888888775555544444                  257899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       259 ~l~h~~~~~  267 (277)
T 3f3z_A          259 ALEHEWFEK  267 (277)
T ss_dssp             HTTSHHHHH
T ss_pred             HhcCHHHhc
Confidence            999999986

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.93  E-value=6e-10  Score=99.70  Aligned_cols=78  Identities=21%  Similarity=0.182  Sum_probs=60.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC---C
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP---T   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~---t   77 (216)
                      ||||++|+++|.+.+..+.+.+|+..-...                 .+......+++++.+||.+||. ||.+|+   +
T Consensus       260 lyelltG~~Pf~~~~~~~~~~~i~~~~~~~-----------------~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~  321 (412)
T 2vd5_A          260 AYEMFYGQTPFYADSTAETYGKIVHYKEHL-----------------SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGG  321 (412)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-----------------CCC----CCCHHHHHHHHTTSS-CGGGCTTTTT
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhcccCc-----------------CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCC
Confidence            589999999999999888888886521100                 0111123578999999999999 999995   8


Q ss_pred             HHHHHcCccccCCCCCCCC
Q 042950           78 AAEALQHLFFKRCLYAPPH   96 (216)
Q Consensus        78 a~eaL~HpfF~~~~~~~~~   96 (216)
                      ++|+++||||+++.|....
T Consensus       322 ~~ei~~Hpff~~i~w~~l~  340 (412)
T 2vd5_A          322 AGDFRTHPFFFGLDWDGLR  340 (412)
T ss_dssp             HHHHHTSGGGTTCCSTTST
T ss_pred             HHHHhcCCCcCCCCHHHHh
Confidence            9999999999999888763

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=98.92  E-value=6.3e-10  Score=95.40  Aligned_cols=72  Identities=21%  Similarity=0.178  Sum_probs=58.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..++..........                  +..+++++.+||.+||.+||.+|+|+.+
T Consensus       266 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~  327 (345)
T 3hko_A          266 LHLLLMGAVPFPGVNDADTISQVLNKKLCFENPN------------------YNVLSPLARDLLSNLLNRNVDERFDAMR  327 (345)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGG------------------GGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCCChHHHHHHHHhcccccCCcc------------------cccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            5799999999999999888888876433222111                  1246899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||++.
T Consensus       328 ~l~hp~~~~~  337 (345)
T 3hko_A          328 ALQHPWISQF  337 (345)
T ss_dssp             HHHSHHHHTT
T ss_pred             HhcChhhccC
Confidence            9999999984

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.92  E-value=9e-10  Score=94.02  Aligned_cols=72  Identities=26%  Similarity=0.222  Sum_probs=60.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..|...........+                  ...+.++.+||.+||..||.+|+|+.|
T Consensus       208 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~~~~~~~li~~~l~~dp~~Rps~~e  269 (321)
T 2a2a_A          208 TYILLSGASPFLGDTKQETLANITSVSYDFDEEFF------------------SHTSELAKDFIRKLLVKETRKRLTIQE  269 (321)
T ss_dssp             HHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHH------------------TTCCHHHHHHHHTTSCSSTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhh------------------cccCHHHHHHHHHHcCCChhhCcCHHH
Confidence            57999999999999988888888765443333322                  357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||...
T Consensus       270 ~l~hp~~~~~  279 (321)
T 2a2a_A          270 ALRHPWITPV  279 (321)
T ss_dssp             HHHSTTTSCS
T ss_pred             HhcCccccCC
Confidence            9999999874

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.92  E-value=6.4e-10  Score=95.76  Aligned_cols=73  Identities=19%  Similarity=0.270  Sum_probs=60.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+++|.+.+..+.+..|+..  ...                    +-..+++++.+||.+||..||.+|+    
T Consensus       193 l~ell~g~~pf~~~~~~~~~~~i~~~--~~~--------------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~  250 (318)
T 1fot_A          193 IYEMLAGYTPFYDSNTMKTYEKILNA--ELR--------------------FPPFFNEDVKDLLSRLITRDLSQRLGNLQ  250 (318)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHHC--CCC--------------------CCTTSCHHHHHHHHHHTCSCTTTCTTSST
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhC--CCC--------------------CCCCCCHHHHHHHHHHhccCHHHcCCCcC
Confidence            58999999999999888888888662  110                    1124789999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~~   95 (216)
                       +++++++||||+++.|...
T Consensus       251 ~~~~~i~~hp~f~~~~~~~~  270 (318)
T 1fot_A          251 NGTEDVKNHPWFKEVVWEKL  270 (318)
T ss_dssp             TTTHHHHTSGGGSSCCHHHH
T ss_pred             CCHHHHhcCccccCCCHHHH
Confidence             8999999999998776544

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.92  E-value=7.1e-10  Score=100.44  Aligned_cols=74  Identities=24%  Similarity=0.371  Sum_probs=60.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|++||.+.+..+.+..|...........|                  ..+++++.+||.+||.+||.+|+|+.+
T Consensus       212 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dp~~R~t~~~  273 (486)
T 3mwu_A          212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW------------------RTISDDAKDLIRKMLTFHPSLRITATQ  273 (486)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGG------------------GGSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccc------------------CCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            57999999999999999988888764333222222                  247899999999999999999999999


Q ss_pred             HHcCccccCCCC
Q 042950           81 ALQHLFFKRCLY   92 (216)
Q Consensus        81 aL~HpfF~~~~~   92 (216)
                      +|+||||+....
T Consensus       274 ~l~hp~~~~~~~  285 (486)
T 3mwu_A          274 CLEHPWIQKYSS  285 (486)
T ss_dssp             HHHCHHHHHTCC
T ss_pred             HhcCHhhccCcc
Confidence            999999997543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.91  E-value=6.9e-10  Score=105.11  Aligned_cols=95  Identities=21%  Similarity=0.260  Sum_probs=71.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      ||||++|+++|.+.+..+++..|+.....                      +-..+++++.+||.+||..||.+|+++  
T Consensus       532 lyelltG~~Pf~~~~~~~~~~~i~~~~~~----------------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~  589 (674)
T 3pfq_A          532 LYEMLAGQAPFEGEDEDELFQSIMEHNVA----------------------YPKSMSKEAVAICKGLMTKHPGKRLGCGP  589 (674)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHSSCCC----------------------CCTTSCHHHHHHHHHHSCSSSTTCTTCST
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHhCCCC----------------------CCccCCHHHHHHHHHHccCCHHHCCCCCC
Confidence            58999999999999998888888652111                      112578999999999999999999997  


Q ss_pred             ---HHHHcCccccCCCCCCCCCCCCcc-ccchhhhhhhhhcccc
Q 042950           79 ---AEALQHLFFKRCLYAPPHIRSVPA-VATTTRGMLKQQGAGI  118 (216)
Q Consensus        79 ---~eaL~HpfF~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  118 (216)
                         .|+++||||+.+.|.....+...+ +.+.... .+..+++.
T Consensus       590 ~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~~-~~~~~f~~  632 (674)
T 3pfq_A          590 EGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG-RNAENFDR  632 (674)
T ss_dssp             THHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCCG-GGHHHHTT
T ss_pred             CcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCCC-CchhhcCc
Confidence               999999999998887655444333 3333333 44444444

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.91  E-value=1.3e-09  Score=95.30  Aligned_cols=71  Identities=31%  Similarity=0.338  Sum_probs=59.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+....+..|...........|                  ...+.++.+||.+||.+||.+|+|+.+
T Consensus       295 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~Rps~~e  356 (365)
T 2y7j_A          295 LFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW------------------DDRSSTVKDLISRLLQVDPEARLTAEQ  356 (365)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHH------------------SSSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCccc------------------ccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            57999999999998888888887764443334444                  257889999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       357 ll~hp~f~r  365 (365)
T 2y7j_A          357 ALQHPFFER  365 (365)
T ss_dssp             HHHSGGGCC
T ss_pred             HhcCcccCC
Confidence            999999973

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.91  E-value=6.4e-10  Score=101.03  Aligned_cols=71  Identities=27%  Similarity=0.365  Sum_probs=60.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+..+.+..|...........|                  ..+++++.+||.+||.+||.+|+|+.+
T Consensus       227 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dp~~R~s~~e  288 (494)
T 3lij_A          227 LFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW------------------KNVSEGAKDLIKQMLQFDSQRRISAQQ  288 (494)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGG------------------TTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhc------------------ccCCHHHHHHHHHHCCCChhhCccHHH
Confidence            58999999999999998888888774443333333                  357899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       289 ~l~hp~~~~  297 (494)
T 3lij_A          289 ALEHPWIKE  297 (494)
T ss_dssp             HHTCHHHHH
T ss_pred             HhcCccccc
Confidence            999999986

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.91  E-value=9.2e-10  Score=100.20  Aligned_cols=72  Identities=29%  Similarity=0.362  Sum_probs=61.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+..+.+..|...........|                  ..+++++.+||.+||.+||.+|||+.|
T Consensus       237 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dp~~R~t~~e  298 (504)
T 3q5i_A          237 MYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW------------------KNISDEAKELIKLMLTYDYNKRCTAEE  298 (504)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH------------------TTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccc------------------CCCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            58999999999999999999888774443444444                  357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       299 ~l~h~~~~~~  308 (504)
T 3q5i_A          299 ALNSRWIKKY  308 (504)
T ss_dssp             HHTSHHHHHT
T ss_pred             HhcCHhhhhc
Confidence            9999999874

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.91  E-value=1.4e-09  Score=92.19  Aligned_cols=36  Identities=36%  Similarity=0.456  Sum_probs=32.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .++.++.+||.+||..||.+|+|+.|+|+||||+.+
T Consensus       267 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          267 HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             cCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence            578999999999999999999999999999999974

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.90  E-value=8.7e-10  Score=96.22  Aligned_cols=96  Identities=21%  Similarity=0.165  Sum_probs=69.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+++|.+.+..+.+..|..  |.+.                    +-..++.++.+||.+||..||.+|++   
T Consensus       228 l~ell~g~~Pf~~~~~~~~~~~i~~--~~~~--------------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~  285 (350)
T 1rdq_E          228 IYEMAAGYPPFFADQPIQIYEKIVS--GKVR--------------------FPSHFSSDLKDLLRNLLQVDLTKRFGNLK  285 (350)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--CCCC--------------------CCTTCCHHHHHHHHHHSCSCTTTCTTSST
T ss_pred             HhHHhhCCCCCCCCCHHHHHHHHHc--CCCC--------------------CCCCCCHHHHHHHHHHhhcCHHhccCCcc
Confidence            5899999999999988888888866  3211                    11247899999999999999999998   


Q ss_pred             --HHHHHcCccccCCCCCCCCCCCCcc-ccchhhhhhhhhcccc
Q 042950           78 --AAEALQHLFFKRCLYAPPHIRSVPA-VATTTRGMLKQQGAGI  118 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  118 (216)
                        +.++++||||....|.....+...+ +.+..+...+..++..
T Consensus       286 ~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~f~~  329 (350)
T 1rdq_E          286 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD  329 (350)
T ss_dssp             TTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCC
T ss_pred             CCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCCCccccccccc
Confidence              9999999999988775443333222 3333344444444433

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.90  E-value=8.3e-10  Score=99.64  Aligned_cols=71  Identities=28%  Similarity=0.372  Sum_probs=58.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..|.......+...|                  ..+++++.+||.+||..||.+|+|+.|
T Consensus       203 lyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dP~~Rpta~e  264 (444)
T 3soa_A          203 LYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW------------------DTVTPEAKDLINKMLTINPSKRITAAE  264 (444)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTT------------------TTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcccc------------------ccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            58999999999999988888888764333222222                  357899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       265 ~L~hp~~~~  273 (444)
T 3soa_A          265 ALKHPWISH  273 (444)
T ss_dssp             HHHSCTTHH
T ss_pred             HhcCccccC
Confidence            999999976

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.90  E-value=5.4e-10  Score=100.93  Aligned_cols=73  Identities=25%  Similarity=0.350  Sum_probs=60.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|++||.+.+..+.+..|...........|                  ..+++++.+||.+||.+||.+|+|+.|
T Consensus       217 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dp~~R~s~~e  278 (484)
T 3nyv_A          217 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW------------------KKVSESAKDLIRKMLTYVPSMRISARD  278 (484)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGG------------------GGSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCccc------------------ccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            58999999999999999988888764333322233                  247899999999999999999999999


Q ss_pred             HHcCccccCCC
Q 042950           81 ALQHLFFKRCL   91 (216)
Q Consensus        81 aL~HpfF~~~~   91 (216)
                      +|+||||+...
T Consensus       279 ~l~h~~~~~~~  289 (484)
T 3nyv_A          279 ALDHEWIQTYT  289 (484)
T ss_dssp             HHTSHHHHHHT
T ss_pred             HhhChhhcccc
Confidence            99999998743

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.90  E-value=1.5e-10  Score=100.98  Aligned_cols=74  Identities=27%  Similarity=0.344  Sum_probs=60.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH-
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA-   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~-   79 (216)
                      ||||++|+++|.+.+..+.+..|..  +.+.                    +-..+++++.+||.+||..||.+|+++. 
T Consensus       208 l~ell~g~~Pf~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~~li~~lL~~dp~~R~~~~~  265 (345)
T 1xjd_A          208 LYEMLIGQSPFHGQDEEELFHSIRM--DNPF--------------------YPRWLEKEAKDLLVKLFVREPEKRLGVRG  265 (345)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--CCCC--------------------CCTTSCHHHHHHHHHHSCSSGGGSBTTBS
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHh--CCCC--------------------CCcccCHHHHHHHHHHhcCCHhHcCCChH
Confidence            5899999999999988888877755  2221                    1124789999999999999999999998 


Q ss_pred             HHHcCccccCCCCCCCC
Q 042950           80 EALQHLFFKRCLYAPPH   96 (216)
Q Consensus        80 eaL~HpfF~~~~~~~~~   96 (216)
                      ++++||||+.+.|....
T Consensus       266 ~i~~hp~f~~~~w~~l~  282 (345)
T 1xjd_A          266 DIRQHPLFREINWEELE  282 (345)
T ss_dssp             CGGGSGGGTTCCHHHHH
T ss_pred             HHHcCccccCCCHHHHh
Confidence            99999999998775443

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.89  E-value=1.2e-09  Score=90.93  Aligned_cols=72  Identities=24%  Similarity=0.209  Sum_probs=57.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..+...........                  ...+++++.+||.+||.+||.+|||+.|
T Consensus       197 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~  258 (284)
T 3kk8_A          197 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE------------------WDTVTPEAKSLIDSMLTVNPKKRITADQ  258 (284)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT------------------TTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCCchhHHHHHHHhccccCCchh------------------hcccCHHHHHHHHHHcccChhhCCCHHH
Confidence            4799999999999888777777765332221111                  2357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||...
T Consensus       259 ~l~h~~~~~~  268 (284)
T 3kk8_A          259 ALKVPWICNR  268 (284)
T ss_dssp             HTTSHHHHSC
T ss_pred             HhcCccccCC
Confidence            9999999984

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.89  E-value=9.5e-10  Score=95.57  Aligned_cols=73  Identities=25%  Similarity=0.261  Sum_probs=58.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+++|.+.+..+.+..|..  +...                    +-..+++++.+||.+||..||.+|+    
T Consensus       195 l~ell~g~~Pf~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~~li~~lL~~dP~~R~g~~~  252 (337)
T 1o6l_A          195 MYEMMCGRLPFYNQDHERLFELILM--EEIR--------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGP  252 (337)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--CCCC--------------------CCTTSCHHHHHHHHHHTCSSTTTSTTCST
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHc--CCCC--------------------CCCCCCHHHHHHHHHHhhcCHHHhcCCCC
Confidence            5899999999999888777777754  2110                    1124789999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~~   95 (216)
                       ++.|+++||||..+.|...
T Consensus       253 ~~~~ei~~h~~f~~~~~~~~  272 (337)
T 1o6l_A          253 SDAKEVMEHRFFLSINWQDV  272 (337)
T ss_dssp             TTHHHHHTSGGGTTCCHHHH
T ss_pred             CCHHHHHcCCCcCCCCHHHH
Confidence             8999999999998776543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.88  E-value=1e-09  Score=98.40  Aligned_cols=72  Identities=25%  Similarity=0.265  Sum_probs=58.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+.+|.+.+..+.+..|......                      +-..+++++.+||.+||.+||.+|+    
T Consensus       339 l~ell~g~~Pf~~~~~~~~~~~i~~~~~~----------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~  396 (446)
T 4ejn_A          339 MYEMMCGRLPFYNQDHEKLFELILMEEIR----------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGS  396 (446)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC----------------------CCTTSCHHHHHHHHHHTCSSTTTSTTCST
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHhCCCC----------------------CCccCCHHHHHHHHHHcccCHHHhCCCCC
Confidence            58999999999998887777777542111                      1124789999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~   94 (216)
                       ++.|+|+||||..+.|..
T Consensus       397 ~t~~ell~hp~f~~~~~~~  415 (446)
T 4ejn_A          397 EDAKEIMQHRFFAGIVWQH  415 (446)
T ss_dssp             TTHHHHHTSGGGTTCCHHH
T ss_pred             CCHHHHHhCccccCCCHHH
Confidence             999999999999876643

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.87  E-value=2.6e-10  Score=108.16  Aligned_cols=76  Identities=21%  Similarity=0.166  Sum_probs=55.8

Q ss_pred             CcccccCCCCCCCCCHHH---HHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAE---QMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~d---ql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||||++|++||.+.+..+   ....|..  +.+                    .+...+++++.|||.+||+.||.+|++
T Consensus       381 lYEmLtG~~PF~~~~~~~~~~i~~~i~~--~~~--------------------~~p~~~S~~a~dLI~~lL~~dP~~Rl~  438 (689)
T 3v5w_A          381 LFKLLRGHSPFRQHKTKDKHEIDRMTLT--MAV--------------------ELPDSFSPELRSLLEGLLQRDVNRRLG  438 (689)
T ss_dssp             HHHHHHSSCTTCGGGCCCHHHHHHHHHH--CCC--------------------CCCTTSCHHHHHHHHHHTCSCGGGCTT
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhhcC--CCC--------------------CCCccCCHHHHHHHHHHccCCHhHCCC
Confidence            589999999998754322   2223322  111                    011357999999999999999999998


Q ss_pred             -----HHHHHcCccccCCCCCCCCCC
Q 042950           78 -----AAEALQHLFFKRCLYAPPHIR   98 (216)
Q Consensus        78 -----a~eaL~HpfF~~~~~~~~~~~   98 (216)
                           |+|+++||||+++.|.....+
T Consensus       439 ~~~~ga~ei~~HpfF~~idW~~l~~~  464 (689)
T 3v5w_A          439 CLGRGAQEVKESPFFRSLDWQMVFLQ  464 (689)
T ss_dssp             CSSSTHHHHTTSGGGTTCCHHHHHTT
T ss_pred             CCCCCHHHHhcCccccCCCHHHHHcC
Confidence                 799999999999988654433

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.87  E-value=2.7e-09  Score=92.18  Aligned_cols=68  Identities=19%  Similarity=0.223  Sum_probs=56.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+....|..  |...                    +-..+++++.+||.+||.+||.+|+|+.|
T Consensus       204 l~ell~g~~pf~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~~li~~~L~~dP~~R~t~~e  261 (328)
T 3fe3_A          204 LYTLVSGSLPFDGQNLKELRERVLR--GKYR--------------------IPFYMSTDCENLLKRFLVLNPIKRGTLEQ  261 (328)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--CCCC--------------------CCTTSCHHHHHHHHHHCCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHh--CCCC--------------------CCCCCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            5899999999999988887777765  3211                    01236899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       262 il~h~~~~~~  271 (328)
T 3fe3_A          262 IMKDRWINAG  271 (328)
T ss_dssp             HTTCTTTTTT
T ss_pred             HhcCHhhcCC
Confidence            9999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.86  E-value=8.8e-10  Score=96.43  Aligned_cols=71  Identities=25%  Similarity=0.294  Sum_probs=57.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+..+.+..|.......+...|                  ..+++++.+||.+||..||.+|+|+.+
T Consensus       220 l~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~R~t~~e  281 (362)
T 2bdw_A          220 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW------------------DTVTPEAKSLIDSMLTVNPKKRITADQ  281 (362)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGG------------------GGSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccc------------------cCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            58999999999998888877777663322222222                  247899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||..
T Consensus       282 ~l~hp~~~~  290 (362)
T 2bdw_A          282 ALKVPWICN  290 (362)
T ss_dssp             HTTSHHHHT
T ss_pred             HhcCcccCC
Confidence            999999986

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.86  E-value=9.1e-10  Score=96.55  Aligned_cols=39  Identities=28%  Similarity=0.394  Sum_probs=33.8

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCCC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~~   92 (216)
                      ..+++++.+||.+||.+||.+|+|+.|+|+||||+.+..
T Consensus       304 ~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          304 RTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             --CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             cccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence            457899999999999999999999999999999998543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=98.86  E-value=8.3e-10  Score=96.66  Aligned_cols=71  Identities=21%  Similarity=0.185  Sum_probs=57.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+.+|..  +.++                 +.++.+.+++++.+||.+||..||.+|+|+.|
T Consensus       246 lyemltG~~Pf~~~~~~~~~~~i~~--~~~~-----------------~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~e  306 (336)
T 4g3f_A          246 MLHMLNGCHPWTQYFRGPLCLKIAS--EPPP-----------------IREIPPSCAPLTAQAIQEGLRKEPVHRASAME  306 (336)
T ss_dssp             HHHHHHSSCSSTTTCCSCCHHHHHH--SCCG-----------------GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHCcCCCCCCCHHHHHHHHHc--CCCC-----------------chhcCccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            5899999999999887777777765  2221                 22334568999999999999999999999999


Q ss_pred             H-------------HcCccccCC
Q 042950           81 A-------------LQHLFFKRC   90 (216)
Q Consensus        81 a-------------L~HpfF~~~   90 (216)
                      +             |+|||+.+.
T Consensus       307 l~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          307 LRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             HHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             HHHHHHHHHhhhhhccCCCcCCC
Confidence            7             679999873

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.85  E-value=1.8e-09  Score=95.66  Aligned_cols=72  Identities=26%  Similarity=0.270  Sum_probs=58.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..|........                  ...+..+++++.+||.+||..||.+|+|+.|
T Consensus       240 l~elltg~~Pf~~~~~~~~~~~i~~~~~~~~------------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~e  301 (387)
T 1kob_A          240 GYVLLSGLSPFAGEDDLETLQNVKRCDWEFD------------------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHD  301 (387)
T ss_dssp             HHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC------------------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC------------------ccccccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            5899999999999998888887765322111                  1123467899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       302 ll~hp~~~~~  311 (387)
T 1kob_A          302 ALEHPWLKGD  311 (387)
T ss_dssp             HHTSTTTSSC
T ss_pred             HhhCccccCC
Confidence            9999999874

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.84  E-value=1e-09  Score=96.04  Aligned_cols=73  Identities=27%  Similarity=0.351  Sum_probs=59.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+++|.+.+..+.+..|+..  .+.                    +-..++.++.+||.+||..||.+|++   
T Consensus       211 l~ell~G~~Pf~~~~~~~~~~~i~~~--~~~--------------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~  268 (353)
T 2i0e_A          211 LYEMLAGQAPFEGEDEDELFQSIMEH--NVA--------------------YPKSMSKEAVAICKGLMTKHPGKRLGCGP  268 (353)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHC--CCC--------------------CCTTSCHHHHHHHHHHTCSCTTSCTTCST
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHhC--CCC--------------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCC
Confidence            58999999999999988888888762  211                    11247899999999999999999994   


Q ss_pred             --HHHHHcCccccCCCCCCC
Q 042950           78 --AAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~~   95 (216)
                        +.++++||||+.+.|...
T Consensus       269 ~~~~~i~~h~~f~~~~w~~l  288 (353)
T 2i0e_A          269 EGERDIKEHAFFRYIDWEKL  288 (353)
T ss_dssp             THHHHHHTSGGGTTCCHHHH
T ss_pred             CCHHHHhcCccccCCCHHHH
Confidence              799999999998877544

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.84  E-value=2.5e-09  Score=92.94  Aligned_cols=72  Identities=24%  Similarity=0.185  Sum_probs=53.2

Q ss_pred             CcccccCCCCCCCC---CHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGT---DEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~---s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||||++|+++|.+.   +..+.+..|....-....                  .....+++++.+||.+||..||.+|+|
T Consensus       210 l~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~------------------~~~~~~s~~~~~li~~~L~~dP~~R~t  271 (342)
T 2qr7_A          210 LYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG------------------GYWNSVSDTAKDLVSKMLHVDPHQRLT  271 (342)
T ss_dssp             HHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCS------------------TTTTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCc------------------cccccCCHHHHHHHHHHCCCChhHCcC
Confidence            58999999999863   344455555431111111                  112458899999999999999999999


Q ss_pred             HHHHHcCccccCC
Q 042950           78 AAEALQHLFFKRC   90 (216)
Q Consensus        78 a~eaL~HpfF~~~   90 (216)
                      +.++|+||||...
T Consensus       272 ~~~il~hp~~~~~  284 (342)
T 2qr7_A          272 AALVLRHPWIVHW  284 (342)
T ss_dssp             HHHHTTSHHHHTG
T ss_pred             HHHHhcCCeecCc
Confidence            9999999999763

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.83  E-value=2.1e-09  Score=90.15  Aligned_cols=70  Identities=30%  Similarity=0.338  Sum_probs=53.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+....+......                   +.......++++.+||.+||.+||.+|||+.|
T Consensus       215 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  275 (285)
T 3is5_A          215 MYFLLTGCLPFTGTSLEEVQQKATYKEPN-------------------YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQ  275 (285)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------------------CCC--CCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHhhhccCCcc-------------------cccccCcCCHHHHHHHHHHccCChhhCcCHHH
Confidence            47999999999988876665555432111                   11111236899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       276 ~l~hp~f~~  284 (285)
T 3is5_A          276 VLHHEWFKQ  284 (285)
T ss_dssp             HHTSGGGGC
T ss_pred             HhcCHHhhc
Confidence            999999986

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.82  E-value=2.2e-09  Score=90.09  Aligned_cols=73  Identities=27%  Similarity=0.224  Sum_probs=57.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..|...........                  ...++.++.+||.+||..||.+|+|+.|
T Consensus       219 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~  280 (298)
T 1phk_A          219 MYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE------------------WDDYSDTVKDLVSRFLVVQPQKRYTAEE  280 (298)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT------------------GGGSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCcCccHHHHHHHHhcCCcccCccc------------------ccccCHHHHHHHHHHccCCcccCCCHHH
Confidence            4799999999999888777777765322211111                  1246889999999999999999999999


Q ss_pred             HHcCccccCCC
Q 042950           81 ALQHLFFKRCL   91 (216)
Q Consensus        81 aL~HpfF~~~~   91 (216)
                      +|+||||++..
T Consensus       281 ll~h~~~~~~~  291 (298)
T 1phk_A          281 ALAHPFFQQYV  291 (298)
T ss_dssp             HTTSGGGCTTC
T ss_pred             HHhChHhhhcc
Confidence            99999999843

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.82  E-value=3.2e-09  Score=92.20  Aligned_cols=71  Identities=27%  Similarity=0.272  Sum_probs=55.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+ .+.+..|+..........|                  ..++.++.+||.+||..||.+|+|+.|
T Consensus       223 l~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dP~~R~s~~e  283 (351)
T 3c0i_A          223 LFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQW------------------SHISESAKDLVRRMLMLDPAERITVYE  283 (351)
T ss_dssp             HHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHH------------------TTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCcccc------------------ccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            589999999998853 4555666553333333333                  357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||++.
T Consensus       284 ~l~hp~~~~~  293 (351)
T 3c0i_A          284 ALNHPWLKER  293 (351)
T ss_dssp             HHTSHHHHTH
T ss_pred             HhcChhhcCC
Confidence            9999999873

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.82  E-value=1.7e-09  Score=93.00  Aligned_cols=71  Identities=27%  Similarity=0.395  Sum_probs=58.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+++|.+.+..+.+..|+.....                      +-+.++.++.+||.+||..||.+|+    
T Consensus       211 l~el~~g~~pf~~~~~~~~~~~i~~~~~~----------------------~p~~~~~~~~~li~~~L~~dp~~R~~~~~  268 (327)
T 3a62_A          211 MYDMLTGAPPFTGENRKKTIDKILKCKLN----------------------LPPYLTQEARDLLKKLLKRNAASRLGAGP  268 (327)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHTCCC----------------------CCTTSCHHHHHHHHHHSCSCGGGSTTSST
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhCCCC----------------------CCCCCCHHHHHHHHHHHhcCHhhccCCCC
Confidence            58999999999999888888888763211                      1134789999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYA   93 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~   93 (216)
                       ++.++|+||||+.+.|.
T Consensus       269 ~~~~e~l~hp~f~~~~~~  286 (327)
T 3a62_A          269 GDAGEVQAHPFFRHINWE  286 (327)
T ss_dssp             TTHHHHHHSGGGSSCCHH
T ss_pred             CCHHHHHcCCcccCCCHH
Confidence             89999999999987654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.81  E-value=2.2e-09  Score=90.67  Aligned_cols=72  Identities=25%  Similarity=0.177  Sum_probs=57.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+..+.+..|.+.......                  .....+++++.+||.+||..||.+|+|+.+
T Consensus       197 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  258 (304)
T 2jam_A          197 TYILLCGYPPFYEETESKLFEKIKEGYYEFES------------------PFWDDISESAKDFICHLLEKDPNERYTCEK  258 (304)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCT------------------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc------------------cccccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            47999999999998888877777663222111                  112457899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       259 ~l~h~~~~~~  268 (304)
T 2jam_A          259 ALSHPWIDGN  268 (304)
T ss_dssp             HHTSHHHHSS
T ss_pred             HhcCccccCC
Confidence            9999999873

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.79  E-value=1.8e-09  Score=90.50  Aligned_cols=72  Identities=24%  Similarity=0.330  Sum_probs=57.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      |+||++|+++|.+.+..+.+..+...........                  ...++.++.+||.+||.+||.+|||+.+
T Consensus       212 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e  273 (287)
T 2wei_A          212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ------------------WRTISDDAKDLIRKMLTFHPSLRITATQ  273 (287)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGG------------------GTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchh------------------hhhcCHHHHHHHHHHcccChhhCcCHHH
Confidence            4799999999999888877777765221111111                  1357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||++.
T Consensus       274 ll~hp~~~~~  283 (287)
T 2wei_A          274 CLEHPWIQKY  283 (287)
T ss_dssp             HHHSHHHHHH
T ss_pred             HhcCHHHhcc
Confidence            9999999874

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.78  E-value=2.4e-09  Score=92.00  Aligned_cols=72  Identities=25%  Similarity=0.255  Sum_probs=52.4

Q ss_pred             CcccccCCCCCCCCCH-------HHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDE-------AEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~-------~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      +|||++|+++|.+.+.       .+.+..|.........+.|.                  .+++++.+||.+||.+||.
T Consensus       199 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------~~s~~~~~li~~~L~~dP~  260 (325)
T 3kn6_A          199 LYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK------------------NVSQEAKDLIQGLLTVDPN  260 (325)
T ss_dssp             HHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHH------------------TSCHHHHHHHHHHHCCCTT
T ss_pred             HHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccccc------------------CCCHHHHHHHHHHCCCChh
Confidence            5799999999987543       34444444322223333332                  5789999999999999999


Q ss_pred             CCCCHHHHHcCccccCC
Q 042950           74 KRPTAAEALQHLFFKRC   90 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~   90 (216)
                      +|+|+.|+|+||||++.
T Consensus       261 ~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          261 KRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             TCCCTTTSTTCGGGCTT
T ss_pred             HCCCHHHHhcChhhccC
Confidence            99999999999999874

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.78  E-value=3.2e-09  Score=88.39  Aligned_cols=72  Identities=26%  Similarity=0.272  Sum_probs=58.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+..+.+..+...........+                  ...+.++.+||.+||..||.+|||+.+
T Consensus       201 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~li~~~l~~dp~~Rps~~~  262 (283)
T 3bhy_A          201 TYILLSGASPFLGETKQETLTNISAVNYDFDEEYF------------------SNTSELAKDFIRRLLVKDPKRRMTIAQ  262 (283)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHH------------------TTCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhc------------------ccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            47999999999998888877777654333332222                  357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       263 ~l~h~~~~~~  272 (283)
T 3bhy_A          263 SLEHSWIKAI  272 (283)
T ss_dssp             HHHCHHHHHH
T ss_pred             HHhCHHHHHH
Confidence            9999999874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.78  E-value=4.9e-09  Score=88.79  Aligned_cols=70  Identities=24%  Similarity=0.305  Sum_probs=56.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..+... +.+...                  ....++..+.+||.+||.+||.+|+|+.|
T Consensus       206 l~ell~g~~pf~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e  266 (297)
T 3fxz_A          206 AIEMIEGEPPYLNENPLRALYLIATN-GTPELQ------------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKE  266 (297)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHH-CSCCCS------------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCC------------------CccccCHHHHHHHHHHccCChhHCcCHHH
Confidence            58999999999998888877776543 221110                  01246889999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       267 ll~h~~~~~  275 (297)
T 3fxz_A          267 LLQHQFLKI  275 (297)
T ss_dssp             HTTCGGGGG
T ss_pred             HhhChhhcc
Confidence            999999987

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.77  E-value=2.1e-09  Score=94.71  Aligned_cols=74  Identities=28%  Similarity=0.310  Sum_probs=60.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH--
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA--   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta--   78 (216)
                      ||||++|+++|.+.+..+.+..|+..  ..                    .+-+.++.++.+||.+||..||.+|+++  
T Consensus       229 l~ell~G~~Pf~~~~~~~~~~~i~~~--~~--------------------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          229 LYEMLYGLPPFYSRNTAEMYDNILNK--PL--------------------QLKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             HHHHHHSSCTTCCSBHHHHHHHHHHS--CC--------------------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHhc--cc--------------------CCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            58999999999999888888888652  11                    0123578999999999999999999986  


Q ss_pred             --HHHHcCccccCCCCCCCC
Q 042950           79 --AEALQHLFFKRCLYAPPH   96 (216)
Q Consensus        79 --~eaL~HpfF~~~~~~~~~   96 (216)
                        .++++|+||+.+.|....
T Consensus       287 ~~~~i~~h~~f~~~~w~~l~  306 (373)
T 2r5t_A          287 DFMEIKSHVFFSLINWDDLI  306 (373)
T ss_dssp             THHHHHTSGGGTTCCHHHHH
T ss_pred             CHHHHhCCccccCCCHHHHH
Confidence              699999999998775543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.77  E-value=3.2e-09  Score=94.59  Aligned_cols=44  Identities=25%  Similarity=0.316  Sum_probs=38.1

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCH------HHHHcCccccCCCCCCCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTA------AEALQHLFFKRCLYAPPHIR   98 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta------~eaL~HpfF~~~~~~~~~~~   98 (216)
                      .++.++.+||.+||..||.+|+++      .|+++||||+.+.|.....+
T Consensus       284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~  333 (396)
T 4dc2_A          284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQK  333 (396)
T ss_dssp             TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTT
T ss_pred             cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcC
Confidence            478999999999999999999995      89999999999877654333

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.76  E-value=6.2e-09  Score=87.64  Aligned_cols=69  Identities=19%  Similarity=0.130  Sum_probs=52.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+.......|......                   +. ..+.+++++.+||.+||..||.+|+|+.|
T Consensus       230 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~-~~~~~~~~l~~li~~~l~~dp~~R~s~~e  289 (298)
T 2zv2_A          230 LYCFVFGQCPFMDERIMCLHSKIKSQALE-------------------FP-DQPDIAEDLKDLITRMLDKNPESRIVVPE  289 (298)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------------------CC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             HHHHHHCCCCCCCccHHHHHHHHhcccCC-------------------CC-CccccCHHHHHHHHHHhhcChhhCCCHHH
Confidence            47999999999887766555555431111                   00 12357899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       290 ~l~hp~~~~  298 (298)
T 2zv2_A          290 IKLHPWVTR  298 (298)
T ss_dssp             HTTCHHHHC
T ss_pred             HhcCccccC
Confidence            999999963

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.75  E-value=4.2e-09  Score=91.60  Aligned_cols=41  Identities=27%  Similarity=0.329  Sum_probs=36.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCH------HHHHcCccccCCCCCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTA------AEALQHLFFKRCLYAPP   95 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta------~eaL~HpfF~~~~~~~~   95 (216)
                      .++.++.+||.+||..||.+|+++      .|+++||||+.+.|...
T Consensus       241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~  287 (345)
T 3a8x_A          241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM  287 (345)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHH
T ss_pred             CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHH
Confidence            478999999999999999999995      89999999998776543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.75  E-value=4.5e-09  Score=91.27  Aligned_cols=72  Identities=25%  Similarity=0.147  Sum_probs=53.6

Q ss_pred             CcccccCCCCCCCCCHHH-HHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAE-QMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~d-ql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+.+|.+.+..+ .+..|........                  ......++.++.+||.+||.+||.+|+|+.
T Consensus       240 l~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  301 (349)
T 2w4o_A          240 TYILLCGFEPFYDERGDQFMFRRILNCEYYFI------------------SPWWDEVSLNAKDLVRKLIVLDPKKRLTTF  301 (349)
T ss_dssp             HHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCC------------------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCcccHHHHHHHHhCCCccC------------------CchhhhCCHHHHHHHHHHccCChhhCcCHH
Confidence            579999999998765444 4444443221111                  112346789999999999999999999999


Q ss_pred             HHHcCccccCC
Q 042950           80 EALQHLFFKRC   90 (216)
Q Consensus        80 eaL~HpfF~~~   90 (216)
                      |+|+||||...
T Consensus       302 e~l~hp~~~~~  312 (349)
T 2w4o_A          302 QALQHPWVTGK  312 (349)
T ss_dssp             HHHHSTTTTST
T ss_pred             HHhcCcccCCC
Confidence            99999999873

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.74  E-value=5.6e-09  Score=86.95  Aligned_cols=69  Identities=25%  Similarity=0.299  Sum_probs=56.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+..+.+..|.......                      ....+.++.+||.+||..||.+|||+.|
T Consensus       197 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e  254 (279)
T 3fdn_A          197 CYEFLVGKPPFEANTYQETYKRISRVEFTF----------------------PDFVTEGARDLISRLLKHNPSQRPMLRE  254 (279)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHHTCCCC----------------------CTTSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCCcHHHHHHHHHhCCCCC----------------------CCcCCHHHHHHHHHHhccChhhCCCHHH
Confidence            478999999999888777777775532211                      1236789999999999999999999999


Q ss_pred             HHcCccccCCC
Q 042950           81 ALQHLFFKRCL   91 (216)
Q Consensus        81 aL~HpfF~~~~   91 (216)
                      +|+||||+...
T Consensus       255 ~l~h~~~~~~~  265 (279)
T 3fdn_A          255 VLEHPWITANS  265 (279)
T ss_dssp             HHHCHHHHHHC
T ss_pred             HhhCccccCCc
Confidence            99999998743

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.72  E-value=6.6e-09  Score=87.00  Aligned_cols=70  Identities=20%  Similarity=0.276  Sum_probs=51.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.....++...+.. +.....                  .-...++++.+||.+||..||.+|+|+.|
T Consensus       219 l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e  279 (290)
T 1t4h_A          219 MLEMATSEYPYSECQNAAQIYRRVTS-GVKPAS------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKD  279 (290)
T ss_dssp             HHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCGG------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCcCcHHHHHHHHhc-cCCccc------------------cCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence            47899999999886655555444322 111110                  11245789999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       280 ll~h~~f~~  288 (290)
T 1t4h_A          280 LLNHAFFQE  288 (290)
T ss_dssp             HHTSGGGC-
T ss_pred             HhhCccccc
Confidence            999999986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.72  E-value=6.4e-09  Score=92.65  Aligned_cols=71  Identities=24%  Similarity=0.284  Sum_probs=52.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHh-hCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSV-LGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~i-lG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+++|.+......+...+.. ........|                  ..+++++.+||.+||.+||.+|+|+.
T Consensus       334 l~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~Rps~~  395 (419)
T 3i6u_A          334 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW------------------AEVSEKALDLVKKLLVVDPKARFTTE  395 (419)
T ss_dssp             HHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH------------------TTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhh------------------cccCHHHHHHHHHHccCChhHCcCHH
Confidence            57999999999876544334333322 111222233                  35789999999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      |+|+||||++
T Consensus       396 e~l~hp~~~~  405 (419)
T 3i6u_A          396 EALRHPWLQD  405 (419)
T ss_dssp             HHHHSGGGCC
T ss_pred             HHhCCcccCC
Confidence            9999999986

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.71  E-value=1.2e-08  Score=87.48  Aligned_cols=70  Identities=21%  Similarity=0.293  Sum_probs=55.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..+..... +...                  ....+++++.+||.+||..||.+|+|+.+
T Consensus       231 l~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e  291 (321)
T 2c30_A          231 VIEMVDGEPPYFSDSPVQAMKRLRDSPP-PKLK------------------NSHKVSPVLRDFLERMLVRDPQERATAQE  291 (321)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCT------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCcC------------------ccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            4799999999999888777776654211 1000                  01246889999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||..
T Consensus       292 ll~hp~~~~  300 (321)
T 2c30_A          292 LLDHPFLLQ  300 (321)
T ss_dssp             HHTSGGGGG
T ss_pred             HhcChhhcc
Confidence            999999986

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.70  E-value=2.3e-08  Score=83.97  Aligned_cols=70  Identities=16%  Similarity=0.230  Sum_probs=55.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+..+.+..|..  +..                    .+...+++++.+||.+||..||.+|+|+.|
T Consensus       203 l~~l~~g~~p~~~~~~~~~~~~i~~--~~~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  260 (305)
T 2wtk_C          203 LYNITTGLYPFEGDNIYKLFENIGK--GSY--------------------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQ  260 (305)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHH--CCC--------------------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCchHHHHHHHHhc--CCC--------------------CCCCccCHHHHHHHHHHccCChhhCCCHHH
Confidence            4799999999998887766666644  211                    112357889999999999999999999999


Q ss_pred             HHcCccccCCCC
Q 042950           81 ALQHLFFKRCLY   92 (216)
Q Consensus        81 aL~HpfF~~~~~   92 (216)
                      +|+||||+....
T Consensus       261 ll~~~~~~~~~~  272 (305)
T 2wtk_C          261 IRQHSWFRKKHP  272 (305)
T ss_dssp             HHHSHHHHSCCC
T ss_pred             HhcCcccccCCC
Confidence            999999997533

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.68  E-value=8.1e-09  Score=86.46  Aligned_cols=78  Identities=27%  Similarity=0.337  Sum_probs=52.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..++.... +....           ...........+.++.+||.+||..||.+|||+.+
T Consensus       217 l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  284 (303)
T 2vwi_A          217 AIELATGAAPYHKYPPMKVLMLTLQNDP-PSLET-----------GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAE  284 (303)
T ss_dssp             HHHHHHSSCTTTTSCGGGHHHHHHTSSC-CCTTC----------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCccCchhhHHHHHhccCC-Ccccc-----------ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHH
Confidence            4799999999988776655544432111 11000           01112234567899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       285 ll~h~~~~~~  294 (303)
T 2vwi_A          285 LLRHKFFQKA  294 (303)
T ss_dssp             HHTSTTC---
T ss_pred             HhhChhhhcC
Confidence            9999999874

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.68  E-value=3.1e-09  Score=92.85  Aligned_cols=72  Identities=19%  Similarity=0.249  Sum_probs=48.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHh-hCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSV-LGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~i-lG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+++|.+.+....+..++.. +...                ..+.. ...+++++.+||.+||.+||.+|+|+.
T Consensus       208 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~----------------~~~~~-~~~~s~~~~~li~~~L~~dP~~Rps~~  270 (361)
T 3uc3_A          208 LYVMLVGAYPFEDPEEPRDYRKTIQRILSVK----------------YSIPD-DIRISPECCHLISRIFVADPATRISIP  270 (361)
T ss_dssp             HHHHHHSSCSCC----CCCHHHHHHHHHTTC----------------CCCCT-TSCCCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred             HHHHHhCCCCCCCCccHHHHHHHHHHHhcCC----------------CCCCC-cCCCCHHHHHHHHHHccCChhHCcCHH
Confidence            57999999999876543333333221 1110                00000 124789999999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      |+|+||||..
T Consensus       271 ell~hp~f~~  280 (361)
T 3uc3_A          271 EIKTHSWFLK  280 (361)
T ss_dssp             HHHTSHHHHT
T ss_pred             HHHhCcchhc
Confidence            9999999976

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.67  E-value=9.4e-09  Score=88.23  Aligned_cols=71  Identities=10%  Similarity=0.112  Sum_probs=51.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+...+...........                   ......++.++.+||.+||.+||.+|+|+.|
T Consensus       198 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  258 (323)
T 3tki_A          198 LTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------------------LNPWKKIDSAPLALLHKILVENPSARITIPD  258 (323)
T ss_dssp             HHHHHHSSCSCSSSCTTSHHHHHHHTTCTT-------------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCchHHHHHHHHhccccc-------------------CCccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            579999999998766543333322211110                   0011347899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       259 il~h~~~~~~  268 (323)
T 3tki_A          259 IKKDRWYNKP  268 (323)
T ss_dssp             HTTCTTTTCC
T ss_pred             HhhChhhccc
Confidence            9999999873

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.67  E-value=1.9e-08  Score=84.46  Aligned_cols=71  Identities=18%  Similarity=0.208  Sum_probs=55.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+..+.+..+........                   ......+.++.+||.+||..||.+|||+.+
T Consensus       212 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  272 (302)
T 2j7t_A          212 LIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-------------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQ  272 (302)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-------------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             HHHHhcCCCCCccCCHHHHHHHHhccCCccc-------------------CCccccCHHHHHHHHHHcccChhhCCCHHH
Confidence            4799999999998887777766655211100                   001236789999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||.+.
T Consensus       273 ll~h~~~~~~  282 (302)
T 2j7t_A          273 LLEHPFVSSI  282 (302)
T ss_dssp             HTTSTTTTTC
T ss_pred             HhcChHHhhh
Confidence            9999999984

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.67  E-value=1.5e-08  Score=84.36  Aligned_cols=69  Identities=20%  Similarity=0.255  Sum_probs=52.1

Q ss_pred             CcccccCCCCCCC-CCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQG-TDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g-~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++|+.+|.+ ......+..++......                    ......++++.+||.+||..||.+|||+.
T Consensus       203 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  262 (290)
T 3fme_A          203 MIELAILRFPYDSWGTPFQQLKQVVEEPSPQ--------------------LPADKFSAEFVDFTSQCLKKNSKERPTYP  262 (290)
T ss_dssp             HHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC--------------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHCCCCccccCchHHHHHHHhccCCCC--------------------cccccCCHHHHHHHHHHhhcChhhCcCHH
Confidence            4789999999986 45555555554421110                    01124789999999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      |+|+||||+.
T Consensus       263 e~l~hp~f~~  272 (290)
T 3fme_A          263 ELMQHPFFTL  272 (290)
T ss_dssp             HHTTSHHHHH
T ss_pred             HHHhCccccc
Confidence            9999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.64  E-value=1.5e-08  Score=87.62  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=34.0

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~   91 (216)
                      .++.++.+||.+||.+||.+|+|+.|+|+||||+...
T Consensus       296 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          296 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             TSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             cccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence            3688999999999999999999999999999998743

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.64  E-value=1.8e-08  Score=85.74  Aligned_cols=71  Identities=27%  Similarity=0.311  Sum_probs=51.5

Q ss_pred             CcccccCCCCCCCCCHHHHHH-HHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMY-KICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~-~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+++|.+......+. .|...........|                  ..++.++.+||.+||..||.+|+|+.
T Consensus       209 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~li~~~l~~dP~~Rps~~  270 (322)
T 2ycf_A          209 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW------------------AEVSEKALDLVKKLLVVDPKARFTTE  270 (322)
T ss_dssp             HHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHH------------------TTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HHHHHhCCCCCcccchHHHHHHHHHhCccccCchhh------------------hhcCHHHHHHHHHHcccCHhhCCCHH
Confidence            479999999998754433333 33321111112222                  35789999999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      ++|+||||.+
T Consensus       271 ~~l~h~~~~~  280 (322)
T 2ycf_A          271 EALRHPWLQD  280 (322)
T ss_dssp             HHHTSGGGCC
T ss_pred             HHhhCcCcCC
Confidence            9999999986

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.64  E-value=1.6e-08  Score=84.43  Aligned_cols=68  Identities=24%  Similarity=0.304  Sum_probs=54.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+..+....|......                      +-..++.++.+||.+||..||.+|+|+.+
T Consensus       202 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~  259 (284)
T 2vgo_A          202 CYEFLVGMPPFDSPSHTETHRRIVNVDLK----------------------FPPFLSDGSKDLISKLLRYHPPQRLPLKG  259 (284)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTTCCC----------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCCCHhHHHHHHhccccC----------------------CCCcCCHHHHHHHHHHhhcCHhhCCCHHH
Confidence            47999999999988877776666542110                      11347889999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       260 ll~h~~~~~~  269 (284)
T 2vgo_A          260 VMEHPWVKAN  269 (284)
T ss_dssp             HHTCHHHHHH
T ss_pred             HhhCHHHHhh
Confidence            9999999863

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.63  E-value=2.7e-08  Score=84.47  Aligned_cols=70  Identities=19%  Similarity=0.183  Sum_probs=54.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..+..... +                   .......+.++.+||.+||..||.+|||+.+
T Consensus       224 l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  283 (326)
T 2x7f_A          224 AIEMAEGAPPLCDMHPMRALFLIPRNPA-P-------------------RLKSKKWSKKFQSFIESCLVKNHSQRPATEQ  283 (326)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHSCC-C-------------------CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCcHHHHHHHhhcCcc-c-------------------cCCccccCHHHHHHHHHHhccChhhCCCHHH
Confidence            4799999999998887776665544211 0                   0012346889999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||.+.
T Consensus       284 ll~hp~~~~~  293 (326)
T 2x7f_A          284 LMKHPFIRDQ  293 (326)
T ss_dssp             HHTSHHHHCC
T ss_pred             HhhChHHhhC
Confidence            9999999973

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.63  E-value=2e-08  Score=91.49  Aligned_cols=68  Identities=24%  Similarity=0.280  Sum_probs=55.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+.+|......                      .-..+++++.+||.+||..||.+|+|+.|
T Consensus       206 l~elltG~~Pf~~~~~~~~~~~i~~~~~~----------------------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~e  263 (476)
T 2y94_A          206 LYALLCGTLPFDDDHVPTLFKKICDGIFY----------------------TPQYLNPSVISLLKHMLQVDPMKRATIKD  263 (476)
T ss_dssp             HHHHHHSSCSSCCSSSHHHHHHHHTTCCC----------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHhcCCcC----------------------CCccCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            57999999999988877777777552211                      01246899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +++||||+..
T Consensus       264 il~hp~~~~~  273 (476)
T 2y94_A          264 IREHEWFKQD  273 (476)
T ss_dssp             HHTCHHHHTT
T ss_pred             HHhCHHhhhc
Confidence            9999999873

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.62  E-value=7.4e-09  Score=91.78  Aligned_cols=72  Identities=22%  Similarity=0.237  Sum_probs=51.1

Q ss_pred             CcccccCCCCCCCCCHHH----HHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAE----QMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~d----ql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~   76 (216)
                      ||||++|+++|.+.+...    ....|..  |...            ..    ...+..++.++.+||.+||..||.+|+
T Consensus       253 l~ell~g~~pf~~~~~~~~~~~~~~~i~~--~~~~------------~~----~~~~~~~s~~~~~li~~~L~~dP~~Rp  314 (400)
T 1nxk_A          253 MYILLCGYPPFYSNHGLAISPGMKTRIRM--GQYE------------FP----NPEWSEVSEEVKMLIRNLLKTEPTQRM  314 (400)
T ss_dssp             HHHHHHSSCSCCCCTTCSSCCSHHHHHHH--TCCC------------CC----TTTTTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             HHHHHhCCCCCCCCccccccHHHHHHHHc--Cccc------------CC----CcccccCCHHHHHHHHHHCCCChhHCc
Confidence            589999999998765322    2233322  2110            00    001235789999999999999999999


Q ss_pred             CHHHHHcCccccCC
Q 042950           77 TAAEALQHLFFKRC   90 (216)
Q Consensus        77 ta~eaL~HpfF~~~   90 (216)
                      |+.|+|+||||...
T Consensus       315 t~~eil~hp~~~~~  328 (400)
T 1nxk_A          315 TITEFMNHPWIMQS  328 (400)
T ss_dssp             CHHHHHHSHHHHTT
T ss_pred             CHHHHhcCccccCC
Confidence            99999999999873

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.62  E-value=2.2e-08  Score=82.92  Aligned_cols=67  Identities=21%  Similarity=0.217  Sum_probs=52.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+..+.+..|......                      +-..++.++.+||.+||..||.+|||+.+
T Consensus       201 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~  258 (276)
T 2h6d_A          201 LYALLCGTLPFDDEHVPTLFKKIRGGVFY----------------------IPEYLNRSVATLLMHMLQVDPLKRATIKD  258 (276)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCcHHHHHHHhhcCccc----------------------CchhcCHHHHHHHHHHccCChhhCCCHHH
Confidence            47899999999887766666655442110                      11236789999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       259 ~l~h~~~~~  267 (276)
T 2h6d_A          259 IREHEWFKQ  267 (276)
T ss_dssp             HHHSHHHHT
T ss_pred             HHhChhhcc
Confidence            999999987

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.61  E-value=2.1e-08  Score=82.94  Aligned_cols=70  Identities=9%  Similarity=0.093  Sum_probs=49.9

Q ss_pred             CcccccCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQ-MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dq-l~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++|+.+|.+.+...+ +..+.....                    .......++.++.+||.+||..||.+|||+.
T Consensus       198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  257 (276)
T 2yex_A          198 LTAMLAGELPWDQPSDSCQEYSDWKEKKT--------------------YLNPWKKIDSAPLALLHKILVENPSARITIP  257 (276)
T ss_dssp             HHHHHHSSCCCSCSCTTSHHHHHHHTTCT--------------------TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HHHHHhCCCCCCCCchHHHHHHHhhhccc--------------------ccCchhhcCHHHHHHHHHHCCCCchhCCCHH
Confidence            4789999999987654322 222221100                    0001134788999999999999999999999


Q ss_pred             HHHcCccccCC
Q 042950           80 EALQHLFFKRC   90 (216)
Q Consensus        80 eaL~HpfF~~~   90 (216)
                      |+|+||||+..
T Consensus       258 ~il~~~~~~~~  268 (276)
T 2yex_A          258 DIKKDRWYNKP  268 (276)
T ss_dssp             HHTTCTTTTCC
T ss_pred             HHhcCccccCh
Confidence            99999999873

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.60  E-value=1.7e-08  Score=86.58  Aligned_cols=86  Identities=15%  Similarity=0.110  Sum_probs=53.8

Q ss_pred             CcccccCCCCCCCCCH-HHHHHHHHHhhCCCCHH-HHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH
Q 042950            1 MAELLLFRPLFQGTDE-AEQMYKICSVLGNPTMD-SWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~-~dql~~I~~ilG~p~~~-~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta   78 (216)
                      +|||++|+++|.+.+. .+.+..|..  +..... .+...  ...............++.++.+||.+||..||.+|||+
T Consensus       242 l~~l~~g~~pf~~~~~~~~~~~~i~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~  317 (348)
T 2pml_X          242 LYVMFYNVVPFSLKISLVELFNNIRT--KNIEYPLDRNHF--LYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITS  317 (348)
T ss_dssp             HHHHHHSSCSSCCSSCSHHHHHHHTS--CCCCCCCSSSSS--TTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHhc--cCcCCccchhhh--hccccccccccchhhcCHHHHHHHHHHccCChhhCCCH
Confidence            4799999999998776 555555533  211100 00000  00000000111124578999999999999999999999


Q ss_pred             HHHHcCccccCC
Q 042950           79 AEALQHLFFKRC   90 (216)
Q Consensus        79 ~eaL~HpfF~~~   90 (216)
                      .|+|+||||.+.
T Consensus       318 ~e~l~hp~f~~~  329 (348)
T 2pml_X          318 EDALKHEWLADT  329 (348)
T ss_dssp             HHHHTSGGGTTC
T ss_pred             HHHhcCccccCC
Confidence            999999999973

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.60  E-value=8.8e-09  Score=86.96  Aligned_cols=75  Identities=19%  Similarity=0.160  Sum_probs=47.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCcc-ccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLS-ELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~-~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+++|.+.+..+....+...+...               ...+. .....+++++.+||.+||.+||.+|+|+.
T Consensus       188 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~  252 (299)
T 3m2w_A          188 MYILLCGYPPFYSNHGLAISPGMKTRIRMG---------------QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT  252 (299)
T ss_dssp             HHHHHHSSCSCCC-------CCSCCSSCTT---------------CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHHCCCCCCCCcchhhhHHHHHHHhhc---------------cccCCchhcccCCHHHHHHHHHHcccChhhCCCHH
Confidence            479999999998765443222111110000               00000 00135789999999999999999999999


Q ss_pred             HHHcCccccCC
Q 042950           80 EALQHLFFKRC   90 (216)
Q Consensus        80 eaL~HpfF~~~   90 (216)
                      |+|+||||...
T Consensus       253 e~l~hp~~~~~  263 (299)
T 3m2w_A          253 EFMNHPWIMQS  263 (299)
T ss_dssp             HHHTSHHHHTG
T ss_pred             HHhcChhhccc
Confidence            99999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.59  E-value=2.1e-08  Score=85.28  Aligned_cols=36  Identities=19%  Similarity=0.202  Sum_probs=33.7

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ..+++++.+||.+||.+||.+|+|+.|+|+||||++
T Consensus       275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          275 AGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             cCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            357899999999999999999999999999999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.59  E-value=2.2e-09  Score=93.38  Aligned_cols=40  Identities=38%  Similarity=0.453  Sum_probs=35.9

Q ss_pred             CCCCHHHHHHHHhccccCCCCCC-----CHHHHHcCccccCCCCC
Q 042950           54 PSASKDAINLIESLCSWDPCKRP-----TAAEALQHLFFKRCLYA   93 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~-----ta~eaL~HpfF~~~~~~   93 (216)
                      ..++..+.+||.+||..||.+|+     ++.|+|+|+||..+.|.
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~  331 (355)
T 1vzo_A          287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWD  331 (355)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHH
T ss_pred             cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChh
Confidence            35788999999999999999999     99999999999986554

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.59  E-value=9.7e-09  Score=88.53  Aligned_cols=76  Identities=21%  Similarity=0.172  Sum_probs=45.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+.......+...+-..   .+       ..    .......+++++.+||.+||.+||.+|+|+.|
T Consensus       219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~-------~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  284 (336)
T 3fhr_A          219 MYILLCGFPPFYSNTGQAISPGMKRRIRLG---QY-------GF----PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQ  284 (336)
T ss_dssp             HHHHHHSSCCC-------------------------------CC----CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCccchhhhhhHHHhhhcc---cc-------cc----CchhhccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            478999999998765433222111110000   00       00    00112357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||++.
T Consensus       285 ll~hp~~~~~  294 (336)
T 3fhr_A          285 FMNHPWINQS  294 (336)
T ss_dssp             HHHSHHHHTG
T ss_pred             HhcCcccccc
Confidence            9999999874

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.57  E-value=3.7e-08  Score=84.52  Aligned_cols=39  Identities=15%  Similarity=0.264  Sum_probs=33.0

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCCCCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP   94 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~~~~   94 (216)
                      .++++.+||.+||..||.+|||+.|+|+||||+++.+..
T Consensus       252 ~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~p~  290 (299)
T 4g31_A          252 KYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPG  290 (299)
T ss_dssp             HCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC----
T ss_pred             cCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCCCC
Confidence            567889999999999999999999999999999876543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.55  E-value=4.5e-09  Score=91.95  Aligned_cols=63  Identities=8%  Similarity=-0.008  Sum_probs=46.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..+..                          ....+++++.+||.+||.+||.+|+|+.|
T Consensus       303 l~elltg~~Pf~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e  356 (377)
T 3byv_A          303 IYWIWCADLPITKDAALGGSEWIFR--------------------------SCKNIPQPVRALLEGFLRYPKEDRLLPLQ  356 (377)
T ss_dssp             HHHHHHSSCCC------CCSGGGGS--------------------------SCCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred             HHHHHHCCCCCcccccccchhhhhh--------------------------hccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence            4789999999977654333322211                          12457899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       357 ~l~hp~f~~  365 (377)
T 3byv_A          357 AMETPEYEQ  365 (377)
T ss_dssp             HHTSHHHHH
T ss_pred             HhhChHHHH
Confidence            999999987

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.55  E-value=7.2e-08  Score=80.44  Aligned_cols=36  Identities=33%  Similarity=0.301  Sum_probs=33.8

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ..++.++.+||.+||..||.+|||+.++|+|+||+.
T Consensus       249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~  284 (295)
T 2clq_A          249 ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKV  284 (295)
T ss_dssp             TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhh
Confidence            357899999999999999999999999999999987

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.53  E-value=6.9e-08  Score=83.18  Aligned_cols=69  Identities=17%  Similarity=0.176  Sum_probs=49.5

Q ss_pred             CcccccCCCCCCCCC-HHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTD-EAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s-~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+++|.+.. ....+..++.....                    ..+-...+.++.+||.+||..||.+|||+.
T Consensus       210 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~  269 (343)
T 3dbq_A          210 LYYMTYGKTPFQQIINQISKLHAIIDPNHE--------------------IEFPDIPEKDLQDVLKCCLKRDPKQRISIP  269 (343)
T ss_dssp             HHHHHHSSCTTTTCCSHHHHHHHHHCTTSC--------------------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhCCCcchhhhhHHHHHHHHhcCCcc--------------------cCCcccCCHHHHHHHHHHcCCChhHCCCHH
Confidence            579999999998643 33333333321110                    011123567899999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      |+|+||||+.
T Consensus       270 e~l~hp~~~~  279 (343)
T 3dbq_A          270 ELLAHPYVQI  279 (343)
T ss_dssp             HHHTSHHHHS
T ss_pred             HHHhCccccc
Confidence            9999999986

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.52  E-value=6.4e-08  Score=84.07  Aligned_cols=69  Identities=25%  Similarity=0.257  Sum_probs=55.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+..+.+..+..... +.                   ......++++.+||.+||..||.+|||+.+
T Consensus       243 l~ell~g~~p~~~~~~~~~~~~~~~~~~-~~-------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~  302 (348)
T 1u5q_A          243 CIELAERKPPLFNMNAMSALYHIAQNES-PA-------------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEV  302 (348)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHSCC-CC-------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhcCC-CC-------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHH
Confidence            5799999999999888888777755211 10                   001246889999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||..
T Consensus       303 ll~h~~~~~  311 (348)
T 1u5q_A          303 LLKHRFVLR  311 (348)
T ss_dssp             HTTCHHHHS
T ss_pred             HhhChhhhc
Confidence            999999986

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.52  E-value=3.7e-08  Score=86.91  Aligned_cols=69  Identities=16%  Similarity=0.186  Sum_probs=50.2

Q ss_pred             CcccccCCCCCCCCC-HHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTD-EAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s-~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+++|.+.. ....+..++.....                 ..+   -...+.++.+||.+||..||.+|||+.
T Consensus       257 l~ell~G~~Pf~~~~~~~~~~~~~~~~~~~-----------------~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~  316 (390)
T 2zmd_A          257 LYYMTYGKTPFQQIINQISKLHAIIDPNHE-----------------IEF---PDIPEKDLQDVLKCCLKRDPKQRISIP  316 (390)
T ss_dssp             HHHHHHSSCTTTTCCCHHHHHHHHHCTTSC-----------------CCC---CCCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHHCCCcchhhhHHHHHHHHHhCcccc-----------------CCC---CccchHHHHHHHHHHcccChhhCCCHH
Confidence            589999999998754 33444444321110                 001   122478899999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      |+|+||||..
T Consensus       317 ell~hp~~~~  326 (390)
T 2zmd_A          317 ELLAHPYVQI  326 (390)
T ss_dssp             HHHTSHHHHS
T ss_pred             HHhhCcCccc
Confidence            9999999986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.52  E-value=6.2e-08  Score=81.81  Aligned_cols=70  Identities=20%  Similarity=0.252  Sum_probs=52.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+....+..+..... +.                 + ......+.++.+||.+||..||.+|||+.+
T Consensus       215 l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~-----------------~-~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~  275 (314)
T 3com_A          215 AIEMAEGKPPYADIHPMRAIFMIPTNPP-PT-----------------F-RKPELWSDNFTDFVKQCLVKSPEQRATATQ  275 (314)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHSCC-CC-----------------C-SSGGGSCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHhcCCC-cc-----------------c-CCcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            4789999999988777666555433211 00                 0 001235789999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       276 ll~~~~~~~  284 (314)
T 3com_A          276 LLQHPFVRS  284 (314)
T ss_dssp             HTTSHHHHT
T ss_pred             HHhCHHHhc
Confidence            999999997

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.52  E-value=4.4e-08  Score=82.64  Aligned_cols=70  Identities=24%  Similarity=0.292  Sum_probs=52.8

Q ss_pred             CcccccCCCCCCC-CCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQG-TDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g-~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+.+|.+ .+..+.+..++..  .+..                + .....++.++.+||.+||..||.+|||+.
T Consensus       219 l~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~----------------~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~  279 (318)
T 2dyl_A          219 LVELATGQFPYKNCKTDFEVLTKVLQE--EPPL----------------L-PGHMGFSGDFQSFVKDCLTKDHRKRPKYN  279 (318)
T ss_dssp             HHHHHHSSCTTTTCCSHHHHHHHHHHS--CCCC----------------C-CSSSCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             HHHHHhCCCCCCCCCccHHHHHHHhcc--CCCC----------------C-CccCCCCHHHHHHHHHHccCChhHCcCHH
Confidence            4799999999986 4555666666542  1110                0 01124789999999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      ++|+||||+.
T Consensus       280 ~ll~h~~~~~  289 (318)
T 2dyl_A          280 KLLEHSFIKR  289 (318)
T ss_dssp             HHTTSHHHHH
T ss_pred             HHhhCHHHHh
Confidence            9999999986

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.50  E-value=1.6e-08  Score=88.15  Aligned_cols=37  Identities=19%  Similarity=0.178  Sum_probs=34.5

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ..+++++.+||.+||.+||.+|+|+.++|+||||+++
T Consensus       323 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          323 TPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             SCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             cCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence            3678999999999999999999999999999999873

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.50  E-value=5e-09  Score=91.01  Aligned_cols=35  Identities=29%  Similarity=0.292  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .+++++.+||.+||.+||.+|+|+.|+|+||||+.
T Consensus       230 ~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          230 FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence            47899999999999999999999999999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.50  E-value=6.5e-08  Score=83.08  Aligned_cols=68  Identities=28%  Similarity=0.319  Sum_probs=54.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..+....-.                      +-..+++++.+||.+||..||.+|+|+.|
T Consensus       231 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e  288 (335)
T 2owb_A          231 MYTLLVGKPPFETSCLKETYLRIKKNEYS----------------------IPKHINPVAASLIQKMLQTDPTARPTINE  288 (335)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHHTCCC----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred             HHHHHHCcCCCCCCCHHHHHHHHhcCCCC----------------------CCccCCHHHHHHHHHHccCChhHCcCHHH
Confidence            47999999999988777666665442110                      11246889999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+|+||.+.
T Consensus       289 ll~~~~~~~~  298 (335)
T 2owb_A          289 LLNDEFFTSG  298 (335)
T ss_dssp             GGGSHHHHTS
T ss_pred             HhcCccccCC
Confidence            9999999874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.49  E-value=4.8e-08  Score=86.51  Aligned_cols=72  Identities=14%  Similarity=0.150  Sum_probs=52.5

Q ss_pred             CcccccCCCCCCCCCH---HHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTDE---AEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~---~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||||++|+++|.+.+.   ...+..+.....                      .+-..++.++.+||.+||..||.+|++
T Consensus       207 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~~----------------------~~p~~~s~~~~~li~~lL~~dP~~R~s  264 (384)
T 4fr4_A          207 AYELLRGRRPYHIRSSTSSKEIVHTFETTVV----------------------TYPSAWSQEMVSLLKKLLEPNPDQRFS  264 (384)
T ss_dssp             HHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC----------------------CCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHhhccc----------------------CCCCcCCHHHHHHHHHHhcCCHhHhcc
Confidence            5899999999986432   222222222110                      011347899999999999999999998


Q ss_pred             -HHHHHcCccccCCCCCC
Q 042950           78 -AAEALQHLFFKRCLYAP   94 (216)
Q Consensus        78 -a~eaL~HpfF~~~~~~~   94 (216)
                       +.++++||||+.+.|..
T Consensus       265 ~~~~l~~hp~f~~~~w~~  282 (384)
T 4fr4_A          265 QLSDVQNFPYMNDINWDA  282 (384)
T ss_dssp             SHHHHHTSGGGTTCCHHH
T ss_pred             cHHHHHcChhhhcCCHHH
Confidence             89999999999987654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.49  E-value=9.5e-09  Score=95.91  Aligned_cols=72  Identities=24%  Similarity=0.291  Sum_probs=53.2

Q ss_pred             CcccccCCCCCCCCCH---HHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC-
Q 042950            1 MAELLLFRPLFQGTDE---AEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP-   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~---~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~-   76 (216)
                      ||||++|+++|.+.+.   .+.+...+.. +..                    .+...+++++.+||.+||..||.+|+ 
T Consensus       375 lyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~~--------------------~~p~~~s~~~~dLI~~lL~~dP~~R~g  433 (576)
T 2acx_A          375 LYEMIAGQSPFQQRKKKIKREEVERLVKE-VPE--------------------EYSERFSPQARSLCSQLLCKDPAERLG  433 (576)
T ss_dssp             HHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CCC--------------------CCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             HHHHHhCCCCCcccccchhHHHHHHHhhc-ccc--------------------cCCccCCHHHHHHHHHhccCCHHHcCC
Confidence            5899999999987643   2333322221 110                    01135789999999999999999999 


Q ss_pred             ----CHHHHHcCccccCCCCC
Q 042950           77 ----TAAEALQHLFFKRCLYA   93 (216)
Q Consensus        77 ----ta~eaL~HpfF~~~~~~   93 (216)
                          ++.|+++||||+.+.|.
T Consensus       434 ~~~~sa~eil~HpfF~~i~w~  454 (576)
T 2acx_A          434 CRGGSAREVKEHPLFKKLNFK  454 (576)
T ss_dssp             CSSSHHHHHHTSGGGTTCCHH
T ss_pred             CCCCCHHHHHhChhhccCCHH
Confidence                79999999999987764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.48  E-value=2.1e-08  Score=83.31  Aligned_cols=35  Identities=31%  Similarity=0.453  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++.++.+||.+||..||.+|||+.++|+||||..
T Consensus       234 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          234 FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred             ccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence            46889999999999999999999999999999987

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.47  E-value=1.1e-07  Score=78.66  Aligned_cols=36  Identities=22%  Similarity=0.361  Sum_probs=32.4

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ..+++++.+||.+||..||.+|||+.++|+||||.+
T Consensus       250 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          250 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS  285 (289)
T ss_dssp             SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred             cccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence            457899999999999999999999999999999987

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.45  E-value=7.6e-08  Score=80.63  Aligned_cols=68  Identities=28%  Similarity=0.316  Sum_probs=53.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+..+.+..+.....                      .+-..+++++.+||.+||..||.+|+|+.|
T Consensus       205 l~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  262 (294)
T 2rku_A          205 MYTLLVGKPPFETSCLKETYLRIKKNEY----------------------SIPKHINPVAASLIQKMLQTDPTARPTINE  262 (294)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTTCC----------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhhccC----------------------CCccccCHHHHHHHHHHcccChhhCcCHHH
Confidence            4789999999988877666655533110                      011246889999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+|+||.+.
T Consensus       263 ll~~~~~~~~  272 (294)
T 2rku_A          263 LLNDEFFTSG  272 (294)
T ss_dssp             GGGSHHHHTS
T ss_pred             HhhChheecC
Confidence            9999999874

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.45  E-value=1.7e-07  Score=77.58  Aligned_cols=68  Identities=21%  Similarity=0.257  Sum_probs=54.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+++|.+.+..+....|..  |..                   ..+....+.++.+||.+||..||.+|||+.|
T Consensus       206 l~~l~~g~~p~~~~~~~~~~~~i~~--~~~-------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  264 (279)
T 2w5a_A          206 LYELCALMPPFTAFSQKELAGKIRE--GKF-------------------RRIPYRYSDELNEIITRMLNLKDYHRPSVEE  264 (279)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--TCC-------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCcccCHHHHHHHHhh--ccc-------------------ccCCcccCHHHHHHHHHHcCCCcccCCCHHH
Confidence            4799999999998887666666654  211                   1112347899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+|+|+.+
T Consensus       265 ll~~~~~~~  273 (279)
T 2w5a_A          265 ILENPLILE  273 (279)
T ss_dssp             HHTSTTCCG
T ss_pred             HHhChhhhh
Confidence            999999987

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.42  E-value=2e-07  Score=78.88  Aligned_cols=69  Identities=17%  Similarity=0.176  Sum_probs=49.1

Q ss_pred             CcccccCCCCCCCCC-HHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTD-EAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s-~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+.+|.+.. ....+..++.....                    ..+....+.++.+||.+||..||.+|||+.
T Consensus       229 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  288 (313)
T 3cek_A          229 LYYMTYGKTPFQQIINQISKLHAIIDPNHE--------------------IEFPDIPEKDLQDVLKCCLKRDPKQRISIP  288 (313)
T ss_dssp             HHHHHHSSCTTTTCCSHHHHHHHHHCTTSC--------------------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhCCCchhhHHHHHHHHHHHHhcccc--------------------cCCcccchHHHHHHHHHHccCCcccCcCHH
Confidence            478999999997653 33333333221100                    011123578899999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      |+|+||||+.
T Consensus       289 ell~h~~~~~  298 (313)
T 3cek_A          289 ELLAHPYVQI  298 (313)
T ss_dssp             HHHTSHHHHC
T ss_pred             HHhcCccccC
Confidence            9999999987

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.41  E-value=1.9e-07  Score=78.46  Aligned_cols=68  Identities=29%  Similarity=0.349  Sum_probs=53.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.+....+..+..  +.+                   ..+...++.++.+||.+||..||.+|||+.+
T Consensus       209 l~~l~~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  267 (303)
T 3a7i_A          209 AIELARGEPPHSELHPMKVLFLIPK--NNP-------------------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKE  267 (303)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHH--SCC-------------------CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHccCCCCCCCcCHHHHHHHhhc--CCC-------------------CCCccccCHHHHHHHHHHcCCChhhCcCHHH
Confidence            4789999999988777666555543  111                   1112357889999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+|+||..
T Consensus       268 ll~~~~~~~  276 (303)
T 3a7i_A          268 LLKHKFILR  276 (303)
T ss_dssp             HTTCHHHHH
T ss_pred             HhhChhhhc
Confidence            999999976

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.37  E-value=1.9e-07  Score=86.44  Aligned_cols=72  Identities=18%  Similarity=0.204  Sum_probs=53.6

Q ss_pred             CcccccCCCCCCCCC----HHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC
Q 042950            1 MAELLLFRPLFQGTD----EAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP   76 (216)
Q Consensus         1 L~ELltG~plF~g~s----~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~   76 (216)
                      ||||++|+++|.+.+    ..+....|..  +.+                    .+-..+++++.+||.+||..||.+|+
T Consensus       379 lyelltG~~PF~~~~~~~~~~~~~~~i~~--~~~--------------------~~p~~~s~~~~~li~~lL~~dP~~R~  436 (543)
T 3c4z_A          379 LYEMIAARGPFRARGEKVENKELKQRVLE--QAV--------------------TYPDKFSPASKDFCEALLQKDPEKRL  436 (543)
T ss_dssp             HHHHHHSSCSSCCTTCCCCHHHHHHHHHH--CCC--------------------CCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHHHHhCCCCCCCCccchhHHHHHHHHhh--ccc--------------------CCCcccCHHHHHHHHHhccCCHhHCC
Confidence            589999999998764    2333344433  111                    01135789999999999999999999


Q ss_pred             C-----HHHHHcCccccCCCCCC
Q 042950           77 T-----AAEALQHLFFKRCLYAP   94 (216)
Q Consensus        77 t-----a~eaL~HpfF~~~~~~~   94 (216)
                      +     +.++++||||+.+.|..
T Consensus       437 ~~~~~~a~ei~~Hpff~~i~w~~  459 (543)
T 3c4z_A          437 GFRDGSCDGLRTHPLFRDISWRQ  459 (543)
T ss_dssp             CCBTTBSHHHHTSGGGTTCCHHH
T ss_pred             CCcccCHHHHHcCccccCCCHHH
Confidence            5     59999999999977643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.37  E-value=9.2e-08  Score=81.08  Aligned_cols=76  Identities=17%  Similarity=0.146  Sum_probs=59.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..++.....+....                  ...++.++.+||.+||..||.+|+++.+
T Consensus       209 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~R~~~~~  270 (311)
T 3ork_A          209 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR------------------HEGLSADLDAVVLKALAKNPENRYQTAA  270 (311)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHH------------------STTCCHHHHHHHHHHTCSSGGGSCSSHH
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccc------------------cCCCCHHHHHHHHHHHhcCHhhChhhHH
Confidence            5899999999999988887777765332221111                  2457899999999999999999999999


Q ss_pred             HHcCccccCCCCCC
Q 042950           81 ALQHLFFKRCLYAP   94 (216)
Q Consensus        81 aL~HpfF~~~~~~~   94 (216)
                      +|.|+|+......+
T Consensus       271 ~l~~~l~~~~~~~~  284 (311)
T 3ork_A          271 EMRADLVRVHNGEP  284 (311)
T ss_dssp             HHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhcCCC
Confidence            99999998644433

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.28  E-value=7.8e-08  Score=82.05  Aligned_cols=36  Identities=25%  Similarity=0.368  Sum_probs=34.0

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+++++.+||.+||..||.+|||+.++|+||||++.
T Consensus       265 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          265 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence            578999999999999999999999999999999983

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=98.27  E-value=6.9e-07  Score=77.05  Aligned_cols=68  Identities=16%  Similarity=0.135  Sum_probs=50.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+++..++..--.+                ..+..+...+++++.+||.+||..||++|||+.|
T Consensus       227 l~Elltg~~Pf~~~~~~~~~~~~~~~~~~~----------------p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e  290 (307)
T 3omv_A          227 LYELMTGELPYSHINNRDQIIFMVGRGYAS----------------PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQ  290 (307)
T ss_dssp             HHHHHHSSCTTTTCCCHHHHHHHHHTTCCC----------------CCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHH
T ss_pred             HHHHHHCCCCCCCCChHHHHHHHHhcCCCC----------------CCcccccccchHHHHHHHHHHcCCCHhHCcCHHH
Confidence            589999999999988777776665421111                1122334568899999999999999999999988


Q ss_pred             HHcC
Q 042950           81 ALQH   84 (216)
Q Consensus        81 aL~H   84 (216)
                      ++++
T Consensus       291 i~~~  294 (307)
T 3omv_A          291 ILSS  294 (307)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7544

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.27  E-value=1.1e-07  Score=81.01  Aligned_cols=36  Identities=31%  Similarity=0.344  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+++++.+||.+||..||.+|||+.++|+||||...
T Consensus       257 ~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence            578999999999999999999999999999999863

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.26  E-value=5.6e-08  Score=86.39  Aligned_cols=63  Identities=8%  Similarity=-0.023  Sum_probs=48.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..++.                          ....+++++.+||.+||..||.+|+|+.+
T Consensus       307 l~elltg~~Pf~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~  360 (413)
T 3dzo_A          307 IYWIWCADLPNTDDAALGGSEWIFR--------------------------SCKNIPQPVRALLEGFLRYPKEDRLLPLQ  360 (413)
T ss_dssp             HHHHHHSSCCCCTTGGGSCSGGGGS--------------------------SCCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCcchhhhHHHHHh--------------------------hcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            4788889888877653322221111                          11257899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       361 ~l~~~~~~~  369 (413)
T 3dzo_A          361 AMETPEYEQ  369 (413)
T ss_dssp             HTTSHHHHH
T ss_pred             HHhCHHHHH
Confidence            999999987

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.26  E-value=3.7e-07  Score=77.10  Aligned_cols=34  Identities=18%  Similarity=0.394  Sum_probs=32.1

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++++.+||.+||..||.+|||+.|+|+||||++
T Consensus       298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          298 KYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             CChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            5678899999999999999999999999999986

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.22  E-value=2.8e-07  Score=79.40  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=33.2

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .+++++.+||.+||..||.+|+|+.++|+||||+.
T Consensus       246 ~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          246 LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence            37899999999999999999999999999999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.22  E-value=1.9e-07  Score=83.63  Aligned_cols=35  Identities=40%  Similarity=0.542  Sum_probs=31.7

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      .+..+.+||.+||..||.+|||+.++|+||||.+.
T Consensus       256 ~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          256 EDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             ccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence            35668999999999999999999999999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.22  E-value=8.6e-07  Score=74.75  Aligned_cols=37  Identities=24%  Similarity=0.312  Sum_probs=33.9

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      ..++.++.+||.+||..||.+|+|+.|+|+||||+..
T Consensus       254 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~  290 (312)
T 2iwi_A          254 AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP  290 (312)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence            3578999999999999999999999999999999974

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.21  E-value=2.5e-07  Score=77.02  Aligned_cols=35  Identities=29%  Similarity=0.328  Sum_probs=32.7

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ..+..+.+||.+||..||.+|||+.++|+||||..
T Consensus       255 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          255 NKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             TTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             cchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            46778999999999999999999999999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.20  E-value=2.2e-07  Score=82.97  Aligned_cols=34  Identities=38%  Similarity=0.576  Sum_probs=31.6

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      ++.++.+||.+||..||.+|||+.++|+||||..
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             chHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            4578999999999999999999999999999964

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.15  E-value=1.3e-06  Score=74.06  Aligned_cols=75  Identities=21%  Similarity=0.221  Sum_probs=49.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC--
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT--   77 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t--   77 (216)
                      +|||++ |+++|.+.+..+.+..+......                     .....+++++.+||.+||..||.+|||  
T Consensus       229 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  287 (323)
T 3qup_A          229 MWEIMTRGQTPYAGIENAEIYNYLIGGNRL---------------------KQPPECMEEVYDLMYQCWSADPKQRPSFT  287 (323)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCccccChHHHHHHHhcCCCC---------------------CCCCccCHHHHHHHHHHccCChhhCcCHH
Confidence            478999 99999988877766666442111                     112357899999999999999999999  


Q ss_pred             -----HHHHHcCccccCCCCCCCC
Q 042950           78 -----AAEALQHLFFKRCLYAPPH   96 (216)
Q Consensus        78 -----a~eaL~HpfF~~~~~~~~~   96 (216)
                           .++++.|+|+......+..
T Consensus       288 ~l~~~l~~~l~~~~~~~~~~~pl~  311 (323)
T 3qup_A          288 CLRMELENILGHLSVLSTSQDPLY  311 (323)
T ss_dssp             HHHHHHHHHHHC------------
T ss_pred             HHHHHHHHHHHHhhhcCCCCCCCC
Confidence                 7889999999985444443

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.11  E-value=2.2e-06  Score=74.45  Aligned_cols=63  Identities=11%  Similarity=0.161  Sum_probs=50.7

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |++||.+.+..+.+..|.+  |...                   ..-..+++++.+||.+||..||++|||+.
T Consensus       250 l~Ellt~G~~Pf~~~~~~~~~~~i~~--g~~~-------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~  308 (329)
T 4aoj_A          250 LWEIFTYGKQPWYQLSNTEAIDCITQ--GREL-------------------ERPRACPPEVYAIMRGCWQREPQQRHSIK  308 (329)
T ss_dssp             HHHHHTTSCCTTCSSCHHHHHHHHHH--TCCC-------------------CCCTTCCHHHHHHHHHHCCSSTTTSCCHH
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCcccccHHHHHHHHHHcCcChhHCcCHH
Confidence            589998 8999999998888887765  3211                   01134789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |++++
T Consensus       309 ei~~~  313 (329)
T 4aoj_A          309 DVHAR  313 (329)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99865

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=98.08  E-value=1.2e-06  Score=76.88  Aligned_cols=64  Identities=16%  Similarity=0.226  Sum_probs=48.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |++||.+.+..+.+..++.- |...                   ..-..+++++.+||.+||..||.+|||+.
T Consensus       277 l~El~t~G~~Pf~~~~~~~~~~~~i~~-g~~~-------------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~  336 (353)
T 4ase_A          277 LWEIFSLGASPYPGVKIDEEFCRRLKE-GTRM-------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFS  336 (353)
T ss_dssp             HHHHTTTSCCSSTTCCCSHHHHHHHHH-TCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHHc-CCCC-------------------CCCccCCHHHHHHHHHHcCcChhHCcCHH
Confidence            589998 99999987655555555432 2210                   01124789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |+++|
T Consensus       337 eil~~  341 (353)
T 4ase_A          337 ELVEH  341 (353)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99998

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=98.07  E-value=1.3e-07  Score=80.35  Aligned_cols=31  Identities=6%  Similarity=-0.155  Sum_probs=28.3

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCcc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLF   86 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~Hpf   86 (216)
                      ++..+.+||.+||.+||.+|+|+.|+|+||=
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          275 LQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             HHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            4567899999999999999999999999975

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.00  E-value=4.3e-06  Score=71.61  Aligned_cols=66  Identities=12%  Similarity=0.163  Sum_probs=52.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||+| |++||.+.+..+.+..|.+  |...                   ..-..+++++.+||.+||..||++|||+.
T Consensus       220 l~Ellt~G~~Pf~~~~~~~~~~~i~~--~~~~-------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~  278 (299)
T 4asz_A          220 LWEIFTYGKQPWYQLSNNEVIECITQ--GRVL-------------------QRPRTCPQEVYELMLGCWQREPHMRKNIK  278 (299)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHH--TCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCCccchHHHHHHHHHHcCCChhHCcCHH
Confidence            589998 8999999998888887765  3211                   01134789999999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      ++  |.|+++
T Consensus       279 ~i--~~~L~~  286 (299)
T 4asz_A          279 GI--HTLLQN  286 (299)
T ss_dssp             HH--HHHHHH
T ss_pred             HH--HHHHHH
Confidence            99  567765

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=97.99  E-value=3e-06  Score=72.87  Aligned_cols=63  Identities=11%  Similarity=0.030  Sum_probs=50.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |++||.+.+..+.+..|.+  |...                   ..-..+++++.+||.+|+..||.+|||+.
T Consensus       237 l~El~t~g~~Pf~~~~~~~~~~~i~~--~~~~-------------------~~p~~~~~~~~~li~~C~~~dP~~RPs~~  295 (308)
T 4gt4_A          237 LWEVFSYGLQPYCGYSNQDVVEMIRN--RQVL-------------------PCPDDCPAWVYALMIECWNEFPSRRPRFK  295 (308)
T ss_dssp             HHHHHTTTCCTTTTCCHHHHHHHHHT--TCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCcccchHHHHHHHHHHcCCChhHCcCHH
Confidence            589998 8999999998887777754  2210                   01135788999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |++++
T Consensus       296 ei~~~  300 (308)
T 4gt4_A          296 DIHSR  300 (308)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=97.96  E-value=7.9e-06  Score=66.81  Aligned_cols=63  Identities=22%  Similarity=0.213  Sum_probs=49.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+..+....+......+                    .+...+++++.+||.+||..||.+|||+.+
T Consensus       201 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  260 (271)
T 3kmu_A          201 LWELVTREVPFADLSNMEIGMKVALEGLRP--------------------TIPPGISPHVSKLMKICMNEDPAKRPKFDM  260 (271)
T ss_dssp             HHHHHHCSCTTTTSCHHHHHHHHHHSCCCC--------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCccccChHHHHHHHHhcCCCC--------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            479999999999988877776665422111                    112357899999999999999999999999


Q ss_pred             HHc
Q 042950           81 ALQ   83 (216)
Q Consensus        81 aL~   83 (216)
                      +++
T Consensus       261 il~  263 (271)
T 3kmu_A          261 IVP  263 (271)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=97.90  E-value=2.3e-07  Score=88.05  Aligned_cols=35  Identities=11%  Similarity=0.169  Sum_probs=29.7

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .+++++.+||.+||.+||.+|||+.++|+||||+.
T Consensus       269 ~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          269 ILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             GGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            35688999999999999999999999999999987

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=97.89  E-value=8e-06  Score=67.13  Aligned_cols=64  Identities=22%  Similarity=0.250  Sum_probs=48.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+.......+......                    ......+++++.+||.+||..||.+|||+.|
T Consensus       204 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  263 (271)
T 3dtc_A          204 LWELLTGEVPFRGIDGLAVAYGVAMNKLA--------------------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTN  263 (271)
T ss_dssp             HHHHHHCCCTTTTSCHHHHHHHHHTSCCC--------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHhhhcCCCC--------------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHH
Confidence            47999999999988876665555331110                    0112347889999999999999999999999


Q ss_pred             HHcC
Q 042950           81 ALQH   84 (216)
Q Consensus        81 aL~H   84 (216)
                      +++|
T Consensus       264 ~l~~  267 (271)
T 3dtc_A          264 ILDQ  267 (271)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=97.88  E-value=4.8e-06  Score=71.41  Aligned_cols=64  Identities=14%  Similarity=0.154  Sum_probs=48.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..++.....+.                    .....++++.+||.+||..||.+|||+.
T Consensus       285 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~  344 (359)
T 3vhe_A          285 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--------------------APDYTTPEMYQTMLDCWHGEPSQRPTFS  344 (359)
T ss_dssp             HHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC--------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhcCCCCCCccchhHHHHHHHHcCCCCC--------------------CCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            579998 9999998775555555444221111                    1124788999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |+++|
T Consensus       345 ell~~  349 (359)
T 3vhe_A          345 ELVEH  349 (359)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=97.88  E-value=7.7e-06  Score=69.47  Aligned_cols=68  Identities=12%  Similarity=0.077  Sum_probs=52.4

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..+......                     .....++..+.+||.+||..||.+|||+.
T Consensus       235 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  293 (327)
T 2yfx_A          235 LWEIFSLGYMPYPSKSNQEVLEFVTSGGRM---------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFA  293 (327)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHTTCCC---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHcCCCCCCCCcCHHHHHHHHhcCCCC---------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence            478998 99999988877666655432111                     11235788999999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      ++++|.|+-.
T Consensus       294 ~ll~~l~~~~  303 (327)
T 2yfx_A          294 IILERIEYCT  303 (327)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999988753

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=97.87  E-value=1.2e-05  Score=67.01  Aligned_cols=67  Identities=15%  Similarity=0.178  Sum_probs=50.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ++||++|+.+|.+.+..+++..++.....                ...+..+...+++++.+||.+||..||.+|||+.+
T Consensus       215 l~el~~g~~p~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~e  278 (289)
T 3og7_A          215 LYELMTGQLPYSNINNRDQIIEMVGRGSL----------------SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPR  278 (289)
T ss_dssp             HHHHHHSSCTTSSCCCHHHHHHHHHHTSC----------------CCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCccccchHHHHHHHhccccc----------------CcchhhccccCCHHHHHHHHHHccCChhhCCCHHH
Confidence            47999999999987776666666543221                11223334467899999999999999999999999


Q ss_pred             HHc
Q 042950           81 ALQ   83 (216)
Q Consensus        81 aL~   83 (216)
                      +++
T Consensus       279 ll~  281 (289)
T 3og7_A          279 ILA  281 (289)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.85  E-value=7.6e-06  Score=67.38  Aligned_cols=63  Identities=16%  Similarity=0.139  Sum_probs=49.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+.+..+.......                     .....++++.+||.+||..||.+|||+.
T Consensus       197 l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~  255 (269)
T 4hcu_A          197 MWEVFSEGKIPYENRSNSEVVEDISTGFRLY---------------------KPRLASTHVYQIMNHCWRERPEDRPAFS  255 (269)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHhcCccCC---------------------CCCcCCHHHHHHHHHHccCCcccCcCHH
Confidence            478999 999999988877777665422111                     0123688999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++|
T Consensus       256 ~ll~~  260 (269)
T 4hcu_A          256 RLLRQ  260 (269)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=97.84  E-value=9.5e-06  Score=70.60  Aligned_cols=68  Identities=12%  Similarity=0.061  Sum_probs=53.4

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..|.......                     ....++.++.+||.+||..||.+|||+.
T Consensus       276 l~ellt~g~~pf~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~  334 (367)
T 3l9p_A          276 LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD---------------------PPKNCPGPVYRIMTQCWQHQPEDRPNFA  334 (367)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCccCCHHHHHHHHHHcCCCHhHCcCHH
Confidence            579998 999999988877777665422111                     1134688999999999999999999999


Q ss_pred             HHHcCccccC
Q 042950           80 EALQHLFFKR   89 (216)
Q Consensus        80 eaL~HpfF~~   89 (216)
                      ++++|.++-.
T Consensus       335 eil~~l~~~~  344 (367)
T 3l9p_A          335 IILERIEYCT  344 (367)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999987753

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=97.83  E-value=3.4e-06  Score=71.80  Aligned_cols=82  Identities=12%  Similarity=0.011  Sum_probs=50.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCC--CCCHHHHHHHHhccccCCCCCCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMP--SASKDAINLIESLCSWDPCKRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~--~~s~~~~dLL~~mL~~dP~kR~ta   78 (216)
                      ||||++|+++|.+.++...+.......+.+....+......... ...+...+.  ..+.++.+||.+||.+||.+|||+
T Consensus       228 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~  306 (322)
T 3soc_A          228 LWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKK-RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA  306 (322)
T ss_dssp             HHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC-CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccC-CCCccccccccchHHHHHHHHHHHccCChhhCcCH
Confidence            58999999999886654444434444455555544332221111 111111111  124568999999999999999999


Q ss_pred             HHHHc
Q 042950           79 AEALQ   83 (216)
Q Consensus        79 ~eaL~   83 (216)
                      .|+++
T Consensus       307 ~ell~  311 (322)
T 3soc_A          307 GCVGE  311 (322)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=97.82  E-value=9.5e-06  Score=67.18  Aligned_cols=63  Identities=19%  Similarity=0.072  Sum_probs=49.4

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+....|........                     ....++++.+||.+||..||.+|||+.
T Consensus       211 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~~p~~Rps~~  269 (283)
T 3gen_A          211 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------------------PHLASEKVYTIMYSCWHEKADERPTFK  269 (283)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---------------------CTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCccccChhHHHHHHhcccCCCC---------------------CCcCCHHHHHHHHHHccCChhHCcCHH
Confidence            478998 9999998888777777655322110                     123578999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++|+|
T Consensus       270 ~ll~~  274 (283)
T 3gen_A          270 ILLSN  274 (283)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=97.80  E-value=1.3e-05  Score=67.71  Aligned_cols=69  Identities=16%  Similarity=0.249  Sum_probs=51.9

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..+..  +.                   +......++.++.+||.+||..||.+|||+.
T Consensus       230 l~el~~~g~~p~~~~~~~~~~~~~~~--~~-------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  288 (322)
T 1p4o_A          230 LWEIATLAEQPYQGLSNEQVLRFVME--GG-------------------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFL  288 (322)
T ss_dssp             HHHHHHTSCCTTTTSCHHHHHHHHHT--TC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhcCCCccccCCHHHHHHHHHc--CC-------------------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence            478998 8899988877666665543  11                   1111235788999999999999999999999


Q ss_pred             HHHcC------ccccCC
Q 042950           80 EALQH------LFFKRC   90 (216)
Q Consensus        80 eaL~H------pfF~~~   90 (216)
                      |+++|      ++|++.
T Consensus       289 e~l~~L~~~~~~~~~~~  305 (322)
T 1p4o_A          289 EIISSIKEEMEPGFREV  305 (322)
T ss_dssp             HHHHHHGGGSCTTHHHH
T ss_pred             HHHHHHHHhhccCCccc
Confidence            99987      666553

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=97.79  E-value=1.7e-05  Score=65.88  Aligned_cols=67  Identities=10%  Similarity=0.012  Sum_probs=47.5

Q ss_pred             CcccccCCCCCCCC---CHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGT---DEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~---s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||||++|+.+|.+.   +..+.+..|......+..                 ..+...+++++.+||.+||..||.+|||
T Consensus       208 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~RP~  270 (298)
T 1csn_A          208 FMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-----------------RELCAGFPEEFYKYMHYARNLAFDATPD  270 (298)
T ss_dssp             HHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-----------------HHHTTTSCHHHHHHHHHHHHCCTTCCCC
T ss_pred             HHHHHcCCCCcchhhccccHHHHHHHHhhccCccH-----------------HHHHhhCcHHHHHHHHHHhcCCcccCCC
Confidence            57999999999874   344445555432221211                 1223467899999999999999999999


Q ss_pred             HHHHHcC
Q 042950           78 AAEALQH   84 (216)
Q Consensus        78 a~eaL~H   84 (216)
                      +.++++.
T Consensus       271 ~~~l~~~  277 (298)
T 1csn_A          271 YDYLQGL  277 (298)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=97.78  E-value=1.2e-05  Score=66.06  Aligned_cols=63  Identities=21%  Similarity=0.073  Sum_probs=48.4

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..+.......                     .....++++.+||.+||..||.+|||+.
T Consensus       195 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~  253 (268)
T 3sxs_A          195 MWEVFSLGKMPYDLYTNSEVVLKVSQGHRLY---------------------RPHLASDTIYQIMYSCWHELPEKRPTFQ  253 (268)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC---------------------CCTTSCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             HHHHHcCCCCCccccChHHHHHHHHcCCCCC---------------------CCCcChHHHHHHHHHHcCCChhhCcCHH
Confidence            478998 999999888777766664421110                     0123578999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++|
T Consensus       254 ~ll~~  258 (268)
T 3sxs_A          254 QLLSS  258 (268)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=97.78  E-value=2.3e-05  Score=66.49  Aligned_cols=69  Identities=17%  Similarity=0.219  Sum_probs=52.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+.+..+.+..+.......                    .+...+++++.+||.+||..||.+|||+.+
T Consensus       229 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~  288 (309)
T 3p86_A          229 LWELATLQQPWGNLNPAQVVAAVGFKCKRL--------------------EIPRNLNPQVAAIIEGCWTNEPWKRPSFAT  288 (309)
T ss_dssp             HHHHHHCCCTTTTSCHHHHHHHHHHSCCCC--------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhcCCCC--------------------CCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            479999999999888777666554322211                    112357899999999999999999999999


Q ss_pred             HHc--CccccC
Q 042950           81 ALQ--HLFFKR   89 (216)
Q Consensus        81 aL~--HpfF~~   89 (216)
                      +++  +.+++.
T Consensus       289 ll~~L~~~~~~  299 (309)
T 3p86_A          289 IMDLLRPLIKS  299 (309)
T ss_dssp             HHHHHHHHHC-
T ss_pred             HHHHHHHHHHh
Confidence            988  566665

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=97.74  E-value=2.2e-05  Score=64.97  Aligned_cols=64  Identities=16%  Similarity=0.132  Sum_probs=49.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..+......+                    .....++.++.+||.+||..||.+|||+.
T Consensus       214 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~  273 (291)
T 1u46_A          214 LWEMFTYGQEPWIGLNGSQILHKIDKEGERL--------------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFV  273 (291)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC--------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCcccCCHHHHHHHHHccCCCC--------------------CCCcCcCHHHHHHHHHHccCCcccCcCHH
Confidence            479999 999999988777766664421111                    01235789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       274 ~l~~~  278 (291)
T 1u46_A          274 ALRDF  278 (291)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99873

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=97.73  E-value=1.5e-05  Score=66.13  Aligned_cols=63  Identities=22%  Similarity=0.314  Sum_probs=48.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|.+.+..+.+..|......                     .....+++++.+||.+||..||.+|||+.
T Consensus       207 l~ell~~g~~pf~~~~~~~~~~~i~~~~~~---------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~  265 (281)
T 1mp8_A          207 MWEILMHGVKPFQGVKNNDVIGRIENGERL---------------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFT  265 (281)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhcCCCCCCcCCHHHHHHHHHcCCCC---------------------CCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            478886 99999988777766666432111                     11235789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       266 ~l~~~  270 (281)
T 1mp8_A          266 ELKAQ  270 (281)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.71  E-value=2.1e-05  Score=65.38  Aligned_cols=64  Identities=20%  Similarity=0.163  Sum_probs=49.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..|..  +..                   ......+++++.+||.+||..||.+||++.
T Consensus       203 l~ellt~g~~p~~~~~~~~~~~~i~~--~~~-------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~  261 (287)
T 1u59_A          203 MWEALSYGQKPYKKMKGPEVMAFIEQ--GKR-------------------MECPPECPPELYALMSDCWIYKWEDRPDFL  261 (287)
T ss_dssp             HHHHHTTSCCTTTTCCTHHHHHHHHT--TCC-------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHhc--CCc-------------------CCCCCCcCHHHHHHHHHHcCCChhhCcCHH
Confidence            479998 9999998877666655543  210                   111235789999999999999999999999


Q ss_pred             HHHcCc
Q 042950           80 EALQHL   85 (216)
Q Consensus        80 eaL~Hp   85 (216)
                      ++++|-
T Consensus       262 ~l~~~l  267 (287)
T 1u59_A          262 TVEQRM  267 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999873

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=97.71  E-value=1.2e-05  Score=68.49  Aligned_cols=65  Identities=17%  Similarity=0.172  Sum_probs=48.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |..+|.+.+..+.+..++...-.+                    ......++++.+||.+||..||.+|||+.
T Consensus       264 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  323 (344)
T 1rjb_A          264 LWEIFSLGVNPYPGIPVDANFYKLIQNGFKM--------------------DQPFYATEEIYIIMQSCWAFDSRKRPSFP  323 (344)
T ss_dssp             HHHHTTTSCCSSTTCCCSHHHHHHHHTTCCC--------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHcCCCCCcccCCcHHHHHHHHhcCCCC--------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence            479998 999998876555555554421111                    01124689999999999999999999999


Q ss_pred             HHHcCc
Q 042950           80 EALQHL   85 (216)
Q Consensus        80 eaL~Hp   85 (216)
                      ++++|-
T Consensus       324 ~l~~~l  329 (344)
T 1rjb_A          324 NLTSFL  329 (344)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999874

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=97.71  E-value=1.6e-05  Score=67.42  Aligned_cols=63  Identities=19%  Similarity=0.157  Sum_probs=47.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..+......                     .....+++++.+||.+||..||.+|||+.
T Consensus       231 l~ellt~g~~pf~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  289 (327)
T 1fvr_A          231 LWEIVSLGGTPYCGMTCAELYEKLPQGYRL---------------------EKPLNCDDEVYDLMRQCWREKPYERPSFA  289 (327)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHGGGTCCC---------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHcCCCCCCCCCcHHHHHHHhhcCCCC---------------------CCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            478998 99999988876655554331100                     11124688999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++|
T Consensus       290 ell~~  294 (327)
T 1fvr_A          290 QILVS  294 (327)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=97.71  E-value=1.3e-05  Score=66.56  Aligned_cols=67  Identities=12%  Similarity=0.035  Sum_probs=45.4

Q ss_pred             CcccccCCCCCCCCC---HHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTD---EAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s---~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||||++|+.+|.+.+   ....+..+....-..+..                 .+...+++++.+||.+||..||.+|||
T Consensus       205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~dp~~Rps  267 (296)
T 3uzp_A          205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE-----------------VLCKGYPSEFATYLNFCRSLRFDDKPD  267 (296)
T ss_dssp             HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH-----------------HHTTTSCHHHHHHHHHHHTSCTTCCCC
T ss_pred             HHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH-----------------HHHhhCCHHHHHHHHHHHhcCcCcCCC
Confidence            579999999998743   223344443321111111                 112457899999999999999999999


Q ss_pred             HHHHHcC
Q 042950           78 AAEALQH   84 (216)
Q Consensus        78 a~eaL~H   84 (216)
                      +.++++.
T Consensus       268 ~~~l~~~  274 (296)
T 3uzp_A          268 YSYLRQL  274 (296)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998763

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=97.70  E-value=2.1e-05  Score=65.09  Aligned_cols=63  Identities=17%  Similarity=0.121  Sum_probs=47.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..+......+                     ....+++++.+||.+||..||.+|||+.
T Consensus       204 l~~llt~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~  262 (281)
T 3cc6_A          204 MWEILSFGKQPFFWLENKDVIGVLEKGDRLP---------------------KPDLCPPVLYTLMTRCWDYDPSDRPRFT  262 (281)
T ss_dssp             HHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCcccCChHHHHHHHhcCCCCC---------------------CCCCCCHHHHHHHHHHccCCchhCcCHH
Confidence            478998 999998776666555554321111                     1124688999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       263 ell~~  267 (281)
T 3cc6_A          263 ELVCS  267 (281)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=97.70  E-value=1.3e-05  Score=67.17  Aligned_cols=64  Identities=14%  Similarity=0.158  Sum_probs=46.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+...+.....+                    ......++++.+||.+||..||.+|||+.
T Consensus       240 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  299 (316)
T 2xir_A          240 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFS  299 (316)
T ss_dssp             HHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC--------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCcccchhHHHHHHhccCccC--------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            478998 999998866444444433321111                    01124688999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++|
T Consensus       300 ell~~  304 (316)
T 2xir_A          300 ELVEH  304 (316)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.69  E-value=2e-05  Score=64.46  Aligned_cols=63  Identities=16%  Similarity=0.139  Sum_probs=48.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+.+..|....-..                     .....+.++.+||.+||..||.+|||+.
T Consensus       195 l~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~  253 (267)
T 3t9t_A          195 MWEVFSEGKIPYENRSNSEVVEDISTGFRLY---------------------KPRLASTHVYQIMNHCWRERPEDRPAFS  253 (267)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHhccCCCCCCCCCHHHHHHHHhcCCcCC---------------------CCccCcHHHHHHHHHHccCChhhCcCHH
Confidence            478999 899999888777666664421110                     0123678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       254 ~ll~~  258 (267)
T 3t9t_A          254 RLLRQ  258 (267)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=97.68  E-value=2e-05  Score=66.00  Aligned_cols=63  Identities=17%  Similarity=0.204  Sum_probs=46.9

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+.......+..  +..                   ......+++++.+||.+||..||.+|||+.
T Consensus       242 l~el~t~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  300 (314)
T 2ivs_A          242 LWEIVTLGGNPYPGIPPERLFNLLKT--GHR-------------------MERPDNCSEEMYRLMLQCWKQEPDKRPVFA  300 (314)
T ss_dssp             HHHHHTTSCCSSTTCCGGGHHHHHHT--TCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHhhc--CCc-------------------CCCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence            478998 9999988776554444432  110                   111235789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       301 ~l~~~  305 (314)
T 2ivs_A          301 DISKD  305 (314)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=97.68  E-value=1.5e-05  Score=66.73  Aligned_cols=64  Identities=20%  Similarity=0.215  Sum_probs=47.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..++.....+.                    .....+.++.+||.+||..||.+|||+.
T Consensus       237 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~  296 (313)
T 1t46_A          237 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRML--------------------SPEHAPAEMYDIMKTCWDADPLKRPTFK  296 (313)
T ss_dssp             HHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC--------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCcccchhHHHHHhccCCCCC--------------------CcccCCHHHHHHHHHHcCCCchhCcCHH
Confidence            478998 9999988765555555544211110                    1124688999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       297 ell~~  301 (313)
T 1t46_A          297 QIVQL  301 (313)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=97.63  E-value=6.7e-05  Score=62.44  Aligned_cols=62  Identities=16%  Similarity=0.174  Sum_probs=47.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+....+..  +..                   ......+++++.+||.+||..||.+|||+.
T Consensus       210 l~~l~~~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  268 (291)
T 1xbb_A          210 MWEAFSYGQKPYRGMKGSEVTAMLEK--GER-------------------MGCPAGCPREMYDLMNLCWTYDVENRPGFA  268 (291)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHT--TCC-------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHc--CCC-------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            479998 9999998887665555533  210                   011235789999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       269 ~l~~  272 (291)
T 1xbb_A          269 AVEL  272 (291)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9876

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=97.62  E-value=2.5e-05  Score=64.70  Aligned_cols=66  Identities=14%  Similarity=0.042  Sum_probs=44.7

Q ss_pred             CcccccCCCCCCCCCHH---HHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTDEA---EQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~---dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||||++|+.+|.+.+..   ..+..+....-..+.                 ......+++++.+||.+||..||.+|||
T Consensus       205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt  267 (296)
T 4hgt_A          205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----------------EVLCKGYPSEFATYLNFCRSLRFDDKPD  267 (296)
T ss_dssp             HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----------------HHHTTTSCHHHHHHHHHHHTSCTTCCCC
T ss_pred             HHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-----------------hhhhccCCHHHHHHHHHHHhcCCCCCCC
Confidence            47999999999875432   233333221111111                 1122457899999999999999999999


Q ss_pred             HHHHHc
Q 042950           78 AAEALQ   83 (216)
Q Consensus        78 a~eaL~   83 (216)
                      +.++++
T Consensus       268 ~~~l~~  273 (296)
T 4hgt_A          268 YSYLRQ  273 (296)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999886

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=97.61  E-value=4.8e-05  Score=64.87  Aligned_cols=63  Identities=13%  Similarity=0.078  Sum_probs=49.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..+......+                     ....+++++.+||.+||..||.+|||+.
T Consensus       244 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~  302 (325)
T 3kul_A          244 MWEVLAYGERPYWNMTNRDVISSVEEGYRLP---------------------APMGCPHALHQLMLDCWHKDRAQRPRFS  302 (325)
T ss_dssp             HHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHHcCCCCC---------------------CCCCcCHHHHHHHHHHccCChhhCcCHH
Confidence            478998 999999988877777765532211                     1124788999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++.
T Consensus       303 eil~~  307 (325)
T 3kul_A          303 QIVSV  307 (325)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98863

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=97.61  E-value=3.8e-05  Score=63.64  Aligned_cols=63  Identities=21%  Similarity=0.151  Sum_probs=44.1

Q ss_pred             CcccccCCCCCCCCCHH--HHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH
Q 042950            1 MAELLLFRPLFQGTDEA--EQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~--dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta   78 (216)
                      +|||++|+.+|.+.+..  ..+..+.. .+..                   ..+...+++++.+||.+||..||.+|||+
T Consensus       218 l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~  277 (287)
T 4f0f_A          218 LYTILTGEGPFDEYSYGKIKFINMIRE-EGLR-------------------PTIPEDCPPRLRNVIELCWSGDPKKRPHF  277 (287)
T ss_dssp             HHHHHHSSCTTTTCCCCHHHHHHHHHH-SCCC-------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHcCCCCCccccccHHHHHHHHhc-cCCC-------------------CCCCcccCHHHHHHHHHHhcCChhhCcCH
Confidence            47999999999865432  22333322 1211                   11123578999999999999999999999


Q ss_pred             HHHHc
Q 042950           79 AEALQ   83 (216)
Q Consensus        79 ~eaL~   83 (216)
                      .++++
T Consensus       278 ~~ll~  282 (287)
T 4f0f_A          278 SYIVK  282 (287)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=97.61  E-value=5.4e-05  Score=64.90  Aligned_cols=69  Identities=12%  Similarity=0.060  Sum_probs=45.9

Q ss_pred             CcccccCCCCCCC--CCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCC--CCCHHHHHHHHhccccCCCCCC
Q 042950            1 MAELLLFRPLFQG--TDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMP--SASKDAINLIESLCSWDPCKRP   76 (216)
Q Consensus         1 L~ELltG~plF~g--~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~--~~s~~~~dLL~~mL~~dP~kR~   76 (216)
                      ||||++|+.+|.+  .+...............+.....               ..+  .++.++.+||.+||..||.+||
T Consensus       250 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~li~~~l~~dp~~Rp  314 (345)
T 2v62_A          250 MLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLK---------------WAPSGSSCCEIAQFLVCAHSLAYDEKP  314 (345)
T ss_dssp             HHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHH---------------HSCTTSCCHHHHHHHHHHHTCCTTCCC
T ss_pred             HHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHh---------------hccccccHHHHHHHHHHHhhcCcccCC
Confidence            5799999999975  33333333333333222221111               112  5788999999999999999999


Q ss_pred             CHHHHHcC
Q 042950           77 TAAEALQH   84 (216)
Q Consensus        77 ta~eaL~H   84 (216)
                      |+.++++.
T Consensus       315 s~~~l~~~  322 (345)
T 2v62_A          315 NYQALKKI  322 (345)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99998873

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=97.60  E-value=2.8e-05  Score=65.32  Aligned_cols=63  Identities=16%  Similarity=0.071  Sum_probs=47.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+....+......                     .....+++++.+||.+||..||.+|||+.
T Consensus       239 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  297 (313)
T 3brb_A          239 MWEIATRGMTPYPGVQNHEMYDYLLHGHRL---------------------KQPEDCLDELYEIMYSCWRTDPLDRPTFS  297 (313)
T ss_dssp             HHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---------------------CCBTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             HHHHHhcCCCCCccCCHHHHHHHHHcCCCC---------------------CCCccccHHHHHHHHHHcCCChhhCcCHH
Confidence            478999 88999887766666555432111                     11235788999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++|
T Consensus       298 ~l~~~  302 (313)
T 3brb_A          298 VLRLQ  302 (313)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=97.58  E-value=2.6e-05  Score=66.12  Aligned_cols=64  Identities=16%  Similarity=0.177  Sum_probs=46.9

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+....+.+..++...-.+.                    .....+.++.+||.+||..||.+|||+.
T Consensus       256 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~  315 (333)
T 2i1m_A          256 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA--------------------QPAFAPKNIYSIMQACWALEPTHRPTFQ  315 (333)
T ss_dssp             HHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCC--------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHcCCCCCCcccchhHHHHHHHhcCCCCC--------------------CCCCCCHHHHHHHHHHhccChhhCcCHH
Confidence            478998 9999988766555555544211110                    0123678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       316 ~l~~~  320 (333)
T 2i1m_A          316 QICSF  320 (333)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=97.58  E-value=4.5e-05  Score=66.47  Aligned_cols=63  Identities=11%  Similarity=0.118  Sum_probs=48.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||++ |..+|.+.+..+.+..+......                     .....+++++.+||.+||..||.+|||+.
T Consensus       283 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~  341 (382)
T 3tt0_A          283 LWEIFTLGGSPYPGVPVEELFKLLKEGHRM---------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFK  341 (382)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHTTCCC---------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---------------------CCCccCCHHHHHHHHHHcCCChhhCcCHH
Confidence            478998 99999988766655555432110                     11235789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |++++
T Consensus       342 ell~~  346 (382)
T 3tt0_A          342 QLVED  346 (382)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=97.58  E-value=4.7e-05  Score=64.58  Aligned_cols=63  Identities=19%  Similarity=0.197  Sum_probs=48.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..|..  +..                   ......++.++.+||.+||..||.+|||+.
T Consensus       266 l~el~t~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~  324 (343)
T 1luf_A          266 LWEIFSYGLQPYYGMAHEEVIYYVRD--GNI-------------------LACPENCPLELYNLMRLCWSKLPADRPSFC  324 (343)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHT--TCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhcCCCcCCCCChHHHHHHHhC--CCc-------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHH
Confidence            478998 9999998887776666543  211                   111235788999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       325 ~~~~~  329 (343)
T 1luf_A          325 SIHRI  329 (343)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=97.57  E-value=5.9e-05  Score=64.19  Aligned_cols=63  Identities=13%  Similarity=0.122  Sum_probs=48.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..+......                     .....++.++.+||.+||..||.+|||+.
T Consensus       249 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  307 (334)
T 2pvf_A          249 MWEIFTLGGSPYPGIPVEELFKLLKEGHRM---------------------DKPANCTNELYMMMRDCWHAVPSQRPTFK  307 (334)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHHTCCC---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCcCcCCHHHHHHHHhcCCCC---------------------CCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence            478998 99999988876666555442111                     11235788999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       308 ell~~  312 (334)
T 2pvf_A          308 QLVED  312 (334)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99876

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=97.57  E-value=6.5e-05  Score=61.94  Aligned_cols=68  Identities=16%  Similarity=0.150  Sum_probs=50.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||++ |+.+|.+.+..+.+..+....-.                     .....++.++.+||.+||..||.+|||+.
T Consensus       200 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~  258 (279)
T 1qpc_A          200 LTEIVTHGRIPYPGMTNPEVIQNLERGYRM---------------------VRPDNCPEELYQLMRLCWKERPEDRPTFD  258 (279)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCcccCHHHHHHHHhcccCC---------------------CCcccccHHHHHHHHHHhccChhhCCCHH
Confidence            478998 99999988877766665432110                     01134788999999999999999999999


Q ss_pred             HHHc--CccccC
Q 042950           80 EALQ--HLFFKR   89 (216)
Q Consensus        80 eaL~--HpfF~~   89 (216)
                      ++++  ..+|..
T Consensus       259 ~l~~~l~~~~~~  270 (279)
T 1qpc_A          259 YLRSVLEDFFTA  270 (279)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            9886  344443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=97.55  E-value=4.8e-05  Score=62.93  Aligned_cols=63  Identities=19%  Similarity=0.245  Sum_probs=45.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|.+.+..+....+......                     .....+++++.+||.+||..||.+|||+.
T Consensus       202 l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  260 (288)
T 3kfa_A          202 LWEIATYGMSPYPGIDLSQVYELLEKDYRM---------------------ERPEGCPEKVYELMRACWQWNPSDRPSFA  260 (288)
T ss_dssp             HHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHhccCCC---------------------CCCCCCCHHHHHHHHHHhCCChhhCcCHH
Confidence            478898 89999887655544444331111                     11235789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++.
T Consensus       261 ~~~~~  265 (288)
T 3kfa_A          261 EIHQA  265 (288)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99763

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=97.53  E-value=7.3e-05  Score=62.76  Aligned_cols=63  Identities=13%  Similarity=0.149  Sum_probs=47.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+....+..+....-. .                 +  ....++.++.+||.+||..||.+|||+.+
T Consensus       233 l~el~~g~~p~~~~~~~~~~~~~~~~~~~-~-----------------~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  292 (319)
T 2y4i_B          233 WYELHAREWPFKTQPAEAIIWQMGTGMKP-N-----------------L--SQIGMGKEISDILLFCWAFEQEERPTFTK  292 (319)
T ss_dssp             HHHHHHSSCSSSSCCHHHHHHHHHTTCCC-C-----------------C--CCSSCCTTHHHHHHHHHCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHhccCCCC-C-----------------C--CcCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence            47999999999988776666655432110 0                 0  01246788999999999999999999999


Q ss_pred             HHc
Q 042950           81 ALQ   83 (216)
Q Consensus        81 aL~   83 (216)
                      +++
T Consensus       293 l~~  295 (319)
T 2y4i_B          293 LMD  295 (319)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            987

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=97.52  E-value=1.3e-05  Score=67.98  Aligned_cols=34  Identities=24%  Similarity=0.188  Sum_probs=28.0

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHc------CccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQ------HLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~------HpfF~~   89 (216)
                      +++++.+||.+||.+||.+|||+.|+++      ++|-++
T Consensus       284 ~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          284 AVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             hHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            4457999999999999999999999954      566655

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=97.51  E-value=9.2e-05  Score=66.20  Aligned_cols=62  Identities=16%  Similarity=0.185  Sum_probs=49.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||++ |+.+|.+.+..+.+..+....-.+.                     ...+++++.+||.+||..||.+|||+.
T Consensus       375 l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~---------------------~~~~~~~l~~li~~cl~~dp~~RPt~~  433 (454)
T 1qcf_A          375 LMEIVTYGRIPYPGMSNPEVIRALERGYRMPR---------------------PENCPEELYNIMMRCWKNRPEERPTFE  433 (454)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC---------------------CTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC---------------------CCCCCHHHHHHHHHHccCChhHCcCHH
Confidence            579999 9999999988877777655221111                     124688999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      +++.
T Consensus       434 ~i~~  437 (454)
T 1qcf_A          434 YIQS  437 (454)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=97.50  E-value=4.4e-05  Score=64.98  Aligned_cols=63  Identities=17%  Similarity=0.115  Sum_probs=46.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+....+......+                     .....+.++.+||.+||..||.+|||+.
T Consensus       209 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~  267 (327)
T 3poz_A          209 VWELMTFGSKPYDGIPASEISSILEKGERLP---------------------QPPICTIDVYMIMVKCWMIDADSRPKFR  267 (327)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---------------------CCTTBCHHHHHHHHHHTCSCGGGSCCHH
T ss_pred             HHHHHhcCCCCccCCCHHHHHHHHHcCCCCC---------------------CCccCCHHHHHHHHHHcCCChhhCCCHH
Confidence            478999 999998876655444333211111                     1234678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++|
T Consensus       268 ell~~  272 (327)
T 3poz_A          268 ELIIE  272 (327)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=97.50  E-value=5.4e-05  Score=64.58  Aligned_cols=63  Identities=17%  Similarity=0.127  Sum_probs=46.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+....+......+                     .....+.++.+||.+||..||.+|||+.
T Consensus       209 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~  267 (327)
T 3lzb_A          209 VWELMTFGSKPYDGIPASEISSILEKGERLP---------------------QPPICTIDVYMIMRKCWMIDADSRPKFR  267 (327)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---------------------CCTTBCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCccCCHHHHHHHHHHcCCChhHCcCHH
Confidence            478999 999998877655544443311111                     1234688999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |+++.
T Consensus       268 ell~~  272 (327)
T 3lzb_A          268 ELIIE  272 (327)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.50  E-value=9e-05  Score=63.29  Aligned_cols=63  Identities=16%  Similarity=0.122  Sum_probs=48.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..|......+                     ....++.++.+||.+||..||.+||++.
T Consensus       240 l~ellt~g~~pf~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~  298 (333)
T 1mqb_A          240 MWEVMTYGERPYWELSNHEVMKAINDGFRLP---------------------TPMDCPSAIYQLMMQCWQQERARRPKFA  298 (333)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---------------------CCTTCBHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHHCCCcCC---------------------CcccCCHHHHHHHHHHcCCChhhCcCHH
Confidence            478888 999998888776666664421111                     1124678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       299 ~l~~~  303 (333)
T 1mqb_A          299 DIVSI  303 (333)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=97.50  E-value=2.1e-05  Score=65.95  Aligned_cols=72  Identities=14%  Similarity=0.147  Sum_probs=52.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      +|||++|+.+|.+.+..+....++.  +......               ....+.+++.+.+||.+||..||.+|++..+
T Consensus       202 l~~ll~g~~pf~~~~~~~~~~~~~~--~~~~~~~---------------~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~  264 (294)
T 4eqm_A          202 LYEMLVGEPPFNGETAVSIAIKHIQ--DSVPNVT---------------TDVRKDIPQSLSNVILRATEKDKANRYKTIQ  264 (294)
T ss_dssp             HHHHHHSSCSSCSSCHHHHHHHHHS--SCCCCHH---------------HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHH
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHhh--ccCCCcc---------------hhcccCCCHHHHHHHHHHhcCCHhHccccHH
Confidence            5899999999999887766655543  2111110               1123457899999999999999999998777


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      .+.+.|..-
T Consensus       265 ~l~~~l~~~  273 (294)
T 4eqm_A          265 EMKDDLSSV  273 (294)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHHH
Confidence            778877654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=97.47  E-value=1.1e-05  Score=67.70  Aligned_cols=75  Identities=12%  Similarity=0.178  Sum_probs=45.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCC--CCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGN--PTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~--p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta   78 (216)
                      +|||++|+++|.+.+....+..|...+..  .....|         -...+.......+..+.+||.+||..||.+|||+
T Consensus       224 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~  294 (307)
T 2nru_A          224 LLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDY---------IDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI  294 (307)
T ss_dssp             HHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHH---------SCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhh---------ccccccccchHHHHHHHHHHHHHcCCCcccCcCH
Confidence            47999999999876544433333322211  111111         0011111111234678999999999999999999


Q ss_pred             HHHHcC
Q 042950           79 AEALQH   84 (216)
Q Consensus        79 ~eaL~H   84 (216)
                      .+++++
T Consensus       295 ~~l~~~  300 (307)
T 2nru_A          295 KKVQQL  300 (307)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=97.47  E-value=5.5e-05  Score=65.89  Aligned_cols=63  Identities=14%  Similarity=0.195  Sum_probs=46.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..+..  |..                   ......++.++.+||.+||..||.+|||+.
T Consensus       295 l~ellt~g~~p~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~  353 (370)
T 2psq_A          295 MWEIFTLGGSPYPGIPVEELFKLLKE--GHR-------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFK  353 (370)
T ss_dssp             HHHHHTTSCCSSTTCCGGGHHHHHHT--TCC-------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHhc--CCC-------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            479998 9999988776555554433  110                   011235788999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |++++
T Consensus       354 ell~~  358 (370)
T 2psq_A          354 QLVED  358 (370)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=97.45  E-value=1.6e-05  Score=67.08  Aligned_cols=32  Identities=22%  Similarity=0.254  Sum_probs=28.4

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCcc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLF   86 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~Hpf   86 (216)
                      ..+..+.+||.+||.+||.+|+|+.|+++|-.
T Consensus       273 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          273 TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            35677899999999999999999999999843

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=97.45  E-value=3.1e-05  Score=65.84  Aligned_cols=63  Identities=17%  Similarity=0.012  Sum_probs=45.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+....+.... .+                    .....++.++.+||.+||..||.+|||+.
T Consensus       207 l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~  265 (325)
T 3kex_A          207 VWELMTFGAEPYAGLRLAEVPDLLEKGE-RL--------------------AQPQICTIDVYMVMVKCWMIDENIRPTFK  265 (325)
T ss_dssp             HHHHHTTSCCTTTTSCTTHHHHHHHTTC-BC--------------------CCCTTBCTTTTHHHHHHTCSCTTTSCCHH
T ss_pred             HHHHHhCCCCCccccCHHHHHHHHHcCC-CC--------------------CCCCcCcHHHHHHHHHHcCCChhhCcCHH
Confidence            478999 999998876555544443311 00                    00123567889999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++|
T Consensus       266 el~~~  270 (325)
T 3kex_A          266 ELANE  270 (325)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=97.43  E-value=6.9e-05  Score=63.20  Aligned_cols=31  Identities=26%  Similarity=0.353  Sum_probs=28.3

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..++.++.+||.+||..||.+|||+.+++++
T Consensus       227 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          227 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            4578999999999999999999999999884

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=97.41  E-value=8.2e-05  Score=61.71  Aligned_cols=63  Identities=17%  Similarity=0.149  Sum_probs=43.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|.+.+..+....+......+                     .....++++.+||.+||..||.+|||+.
T Consensus       218 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~  276 (298)
T 3pls_A          218 LWELLTRGAPPYRHIDPFDLTHFLAQGRRLP---------------------QPEYCPDSLYQVMQQCWEADPAVRPTFR  276 (298)
T ss_dssp             HHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---------------------CCccchHHHHHHHHHHccCChhhCcCHH
Confidence            478888 556666666555555443322111                     1124678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++.
T Consensus       277 ~ll~~  281 (298)
T 3pls_A          277 VLVGE  281 (298)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98874

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=97.40  E-value=8.1e-05  Score=61.42  Aligned_cols=62  Identities=8%  Similarity=0.065  Sum_probs=45.1

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+++|.+.+..+.+..+.....                     ......+++++.+||.+||..||.+|||+.
T Consensus       204 l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~  262 (278)
T 1byg_A          204 LWEIYSFGRVPYPRIPLKDVVPRVEKGYK---------------------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFL  262 (278)
T ss_dssp             HHHHHTTSCCSCTTSCGGGHHHHHTTTCC---------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHhcCCC---------------------CCCcccCCHHHHHHHHHHhcCChhhCCCHH
Confidence            478887 8999987765555544432110                     011235789999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       263 ~l~~  266 (278)
T 1byg_A          263 QLRE  266 (278)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=97.39  E-value=0.00013  Score=65.19  Aligned_cols=68  Identities=19%  Similarity=0.211  Sum_probs=51.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..+......+                     ....+++++.+||.+||..||.+|||+.
T Consensus       371 l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~l~~li~~cl~~dP~~Rpt~~  429 (452)
T 1fmk_A          371 LTELTTKGRVPYPGMVNREVLDQVERGYRMP---------------------CPPECPESLHDLMCQCWRKEPEERPTFE  429 (452)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            579999 999999988877777664421111                     1134788999999999999999999999


Q ss_pred             HHHcC--ccccC
Q 042950           80 EALQH--LFFKR   89 (216)
Q Consensus        80 eaL~H--pfF~~   89 (216)
                      ++++.  .+|..
T Consensus       430 ~l~~~L~~~~~~  441 (452)
T 1fmk_A          430 YLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHHTTTSC
T ss_pred             HHHHHHHHHhcc
Confidence            98873  55544

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=97.38  E-value=5.8e-05  Score=63.62  Aligned_cols=64  Identities=20%  Similarity=0.126  Sum_probs=43.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC-CHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP-TAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~-ta~   79 (216)
                      ||||++|+.+|.+.+.. .+..++.... +.                 .....+.++.++.+||.+||..||.+|+ +++
T Consensus       225 l~~l~~g~~pf~~~~~~-~~~~~~~~~~-~~-----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~  285 (309)
T 2h34_A          225 LYECLTGSPPYQGDQLS-VMGAHINQAI-PR-----------------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCG  285 (309)
T ss_dssp             HHHHHHSSCSSCSCHHH-HHHHHHHSCC-CC-----------------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHH
T ss_pred             HHHHHHCCCCCCCchHH-HHHHHhccCC-CC-----------------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHH
Confidence            47899999999876543 3333333211 11                 1122346788999999999999999999 677


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       286 ~l~~  289 (309)
T 2h34_A          286 DLSA  289 (309)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6664

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=97.38  E-value=0.00011  Score=64.07  Aligned_cols=62  Identities=13%  Similarity=0.151  Sum_probs=45.9

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+....+... ..++                    ....+++++.+||.+||..||.+|||+.
T Consensus       305 l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~--------------------~~~~~~~~l~~li~~cl~~dP~~Rps~~  363 (377)
T 3cbl_A          305 LWETFSLGASPYPNLSNQQTREFVEKG-GRLP--------------------CPELCPDAVFRLMEQCWAYEPGQRPSFS  363 (377)
T ss_dssp             HHHHHTTSCCSSTTSCHHHHHHHHHTT-CCCC--------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCC--------------------CCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence            479998 99999988776655544331 1110                    1123678999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       364 ~i~~  367 (377)
T 3cbl_A          364 TIYQ  367 (377)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=97.37  E-value=6.7e-05  Score=62.09  Aligned_cols=30  Identities=20%  Similarity=0.442  Sum_probs=27.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..+.++.+||.+||..||.+|+|+.++++|
T Consensus       240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          240 PKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            356788999999999999999999999987

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=97.36  E-value=7.5e-05  Score=62.14  Aligned_cols=63  Identities=10%  Similarity=0.005  Sum_probs=45.9

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |.++|.+.+..+....+.......                     .....+.++.+||.+||..||.+|||+.
T Consensus       222 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~  280 (298)
T 3f66_A          222 LWELMTRGAPPYPDVNTFDITVYLLQGRRLL---------------------QPEYCPDPLYEVMLKCWHPKAEMRPSFS  280 (298)
T ss_dssp             HHHHHTTSCCSSTTSCTTTHHHHHHTTCCCC---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCccCCHHHHHHHHhcCCCCC---------------------CCccCCHHHHHHHHHHcCCChhhCcCHH
Confidence            478888 678888777666665554421111                     0123678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++++.
T Consensus       281 ell~~  285 (298)
T 3f66_A          281 ELVSR  285 (298)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99873

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=97.33  E-value=9e-05  Score=62.11  Aligned_cols=65  Identities=18%  Similarity=0.192  Sum_probs=41.9

Q ss_pred             CcccccCCCCCCCCC-HHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTD-EAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s-~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++|+.+|.+.. ....+...+.....+.                   ......+.++.+||.+||..||.+|||+.
T Consensus       226 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  286 (310)
T 2wqm_A          226 LYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP-------------------LPSDHYSEELRQLVNMCINPDPEKRPDVT  286 (310)
T ss_dssp             HHHHHHSSCTTC---CCHHHHHHHHHTTCSCC-------------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCcccchhHHHHHHHhhcccCCC-------------------CcccccCHHHHHHHHHHcCCChhhCCCHH
Confidence            478999999987643 2222222222211110                   00134688999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       287 ~il~~  291 (310)
T 2wqm_A          287 YVYDV  291 (310)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=97.33  E-value=0.00023  Score=66.76  Aligned_cols=62  Identities=15%  Similarity=0.092  Sum_probs=48.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..|......+                     ....+++++.+||.+||..||.+|||+.
T Consensus       562 l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~---------------------~p~~~~~~l~~li~~cl~~dP~~RPs~~  620 (635)
T 4fl3_A          562 MWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---------------------CPAGCPREMYDLMNLCWTYDVENRPGFA  620 (635)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCCCCCHHHHHHHHHHcCCCHhHCcCHH
Confidence            579998 999999988877766665421110                     1134789999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       621 ~l~~  624 (635)
T 4fl3_A          621 AVEL  624 (635)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=97.31  E-value=0.0002  Score=65.63  Aligned_cols=68  Identities=19%  Similarity=0.211  Sum_probs=51.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..|....-.+                     ....++.++.+||.+||..||.+|||+.
T Consensus       454 l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~l~~li~~cl~~dP~~RPt~~  512 (535)
T 2h8h_A          454 LTELTTKGRVPYPGMVNREVLDQVERGYRMP---------------------CPPECPESLHDLMCQCWRKEPEERPTFE  512 (535)
T ss_dssp             HHHHTTTTCCSSTTCCHHHHHHHHHTTCCCC---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCCCCCHHHHHHHHHHcCCChhHCcCHH
Confidence            579999 999999988877777664421111                     1134788999999999999999999999


Q ss_pred             HHHcC--ccccC
Q 042950           80 EALQH--LFFKR   89 (216)
Q Consensus        80 eaL~H--pfF~~   89 (216)
                      ++++.  .+|..
T Consensus       513 ~l~~~L~~~~~~  524 (535)
T 2h8h_A          513 YLQAFLEDYFTS  524 (535)
T ss_dssp             HHHHHHHTSSCC
T ss_pred             HHHHHHHHHhhc
Confidence            98874  45543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=97.30  E-value=1e-05  Score=71.06  Aligned_cols=80  Identities=15%  Similarity=0.062  Sum_probs=46.2

Q ss_pred             CcccccCCCCCCCC----CHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccC-------CCCCHHHHHHHHhccc
Q 042950            1 MAELLLFRPLFQGT----DEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELM-------PSASKDAINLIESLCS   69 (216)
Q Consensus         1 L~ELltG~plF~g~----s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~-------~~~s~~~~dLL~~mL~   69 (216)
                      ||||++|+.+|.+.    ...+.+..|+.  |.|.. .|...... ......|...+       ..++..+.+||.+||.
T Consensus       213 l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--~~p~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~  288 (396)
T 4eut_A          213 FYHAATGSLPFRPFEGPRRNKEVMYKIIT--GKPSG-AISGVQKA-ENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILE  288 (396)
T ss_dssp             HHHHHHSSCSEECTTCTTTCHHHHHHHHH--SCCTT-CCEEEECS-TTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHCCCCCCCCCcccchHHHHHHHhc--CCCcc-cchhheec-cCCCcccCccCCcccccchHHHhhchHHHHHhhc
Confidence            58999999999752    33455555543  43321 11100000 00001111111       1245677899999999


Q ss_pred             cCCCCCCCHHHHHcC
Q 042950           70 WDPCKRPTAAEALQH   84 (216)
Q Consensus        70 ~dP~kR~ta~eaL~H   84 (216)
                      +||.+|+|+.+++++
T Consensus       289 ~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          289 ADQEKCWGFDQFFAE  303 (396)
T ss_dssp             CCTTTSCCHHHHHHH
T ss_pred             cChhhhccHHHHHHH
Confidence            999999999998654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=97.30  E-value=0.0002  Score=65.03  Aligned_cols=75  Identities=12%  Similarity=0.028  Sum_probs=49.9

Q ss_pred             CcccccCCCCCCCCCH---HHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTDE---AEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~---~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||||++|+.+|.+...   .+.+..|....-....+.                 +...++.++.+||.+||.+||.+||+
T Consensus       203 l~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~-----------------l~~~~p~~l~~li~~cl~~dP~~RPs  265 (483)
T 3sv0_A          203 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA-----------------LCRGYPTEFASYFHYCRSLRFDDKPD  265 (483)
T ss_dssp             HHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH-----------------HHTTSCHHHHHHHHHHHTCCTTCCCC
T ss_pred             HHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH-----------------HhcCCcHHHHHHHHHHhcCChhhCcC
Confidence            5899999999987543   334444433211111111                 12357899999999999999999999


Q ss_pred             HHHHHc----------CccccCCCC
Q 042950           78 AAEALQ----------HLFFKRCLY   92 (216)
Q Consensus        78 a~eaL~----------HpfF~~~~~   92 (216)
                      +.++++          |+|+..+.|
T Consensus       266 ~~el~~~L~~l~~~~~~~~~~~~dW  290 (483)
T 3sv0_A          266 YSYLKRLFRDLFIREGFQFDYVFDW  290 (483)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSSCCHH
T ss_pred             HHHHHHHHHHHHHHcCCCccCCcCc
Confidence            887654          566655444

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=97.29  E-value=0.00017  Score=61.28  Aligned_cols=65  Identities=12%  Similarity=0.060  Sum_probs=42.9

Q ss_pred             CcccccCCCCCCCCC---HHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTD---EAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s---~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      ||||++|+.+|.+.+   ..+.+..|....-..+.+.+                 .. ..+++.+||..||..||.+||+
T Consensus       207 l~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------------~~-~~p~~~~li~~~l~~~p~~RP~  268 (330)
T 2izr_A          207 FMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL-----------------CE-NFPEMATYLRYVRRLDFFEKPD  268 (330)
T ss_dssp             HHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHH-----------------TT-TCHHHHHHHHHHHHCCTTCCCC
T ss_pred             HHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHH-----------------hc-cChHHHHHHHHHHhCCCCCCCC
Confidence            589999999998843   33334444332111111111                 12 2348999999999999999999


Q ss_pred             HHHHHc
Q 042950           78 AAEALQ   83 (216)
Q Consensus        78 a~eaL~   83 (216)
                      +.++++
T Consensus       269 ~~~l~~  274 (330)
T 2izr_A          269 YDYLRK  274 (330)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888776

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.29  E-value=9.8e-06  Score=68.20  Aligned_cols=67  Identities=13%  Similarity=0.069  Sum_probs=45.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHH-hhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICS-VLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~-ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|+.+|.+.+..+.+..+.. +.+.+.                ....+.+.+++++.+||.+||..||.+| |+.
T Consensus       192 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~  254 (286)
T 3uqc_A          192 LYALLVNRWPLPEAGVRSGLAPAERDTAGQPI----------------EPADIDRDIPFQISAVAARSVQGDGGIR-SAS  254 (286)
T ss_dssp             HHHHHHSEECSCCCSBCCCSEECCBCTTSCBC----------------CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHH
T ss_pred             HHHHHHCCCCCCcCCcchhhHHHHHHhccCCC----------------ChhhcccCCCHHHHHHHHHHcccCCccC-CHH
Confidence            5799999999988765432211111 111111                1112235688999999999999999999 999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |+++.
T Consensus       255 el~~~  259 (286)
T 3uqc_A          255 TLLNL  259 (286)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=97.29  E-value=0.00012  Score=62.84  Aligned_cols=71  Identities=13%  Similarity=0.043  Sum_probs=44.7

Q ss_pred             CcccccCCCCCCCCC-HHHHHHHH-HHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCH
Q 042950            1 MAELLLFRPLFQGTD-EAEQMYKI-CSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTA   78 (216)
Q Consensus         1 L~ELltG~plF~g~s-~~dql~~I-~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta   78 (216)
                      ||||++|+.+|.+.+ ..+.+..+ ..+...+..-           ..  .......++.++.+||.+||..||.+|||+
T Consensus       258 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  324 (352)
T 2jii_A          258 MLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPF-----------VG--PCGHWIRPSETLQKYLKVVMALTYEEKPPY  324 (352)
T ss_dssp             HHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCE-----------EC--TTSCEECCCHHHHHHHHHHHTCCTTCCCCH
T ss_pred             HHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhh-----------hh--hccccCCCcHHHHHHHHHHHhCChhhCCCH
Confidence            579999999998753 33333332 2222211100           00  000012468999999999999999999999


Q ss_pred             HHHHcC
Q 042950           79 AEALQH   84 (216)
Q Consensus        79 ~eaL~H   84 (216)
                      .++++.
T Consensus       325 ~~l~~~  330 (352)
T 2jii_A          325 AMLRNN  330 (352)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998763

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=97.23  E-value=0.00028  Score=66.45  Aligned_cols=63  Identities=24%  Similarity=0.357  Sum_probs=49.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+.+..|......+                     ..+.+++++.+||.+||..||.+|||+.
T Consensus       582 l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~l~~li~~~l~~dP~~RPs~~  640 (656)
T 2j0j_A          582 MWEILMHGVKPFQGVKNNDVIGRIENGERLP---------------------MPPNCPPTLYSLMTKCWAYDPSRRPRFT  640 (656)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCccccHHHHHHHHHHcCCChhHCcCHH
Confidence            478987 999999988888877776521111                     1235789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       641 el~~~  645 (656)
T 2j0j_A          641 ELKAQ  645 (656)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98863

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=97.22  E-value=5.5e-05  Score=64.10  Aligned_cols=31  Identities=16%  Similarity=0.261  Sum_probs=28.1

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..+++++.+||.+||..||.+|||+.++++|
T Consensus       267 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          267 PACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4578999999999999999999999999765

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=97.22  E-value=0.0002  Score=62.42  Aligned_cols=62  Identities=10%  Similarity=0.044  Sum_probs=45.9

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..+......+                     ....++.++.+||.+||..||.+||++.
T Consensus       240 l~ellt~g~~P~~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~l~~li~~cl~~dp~~RPs~~  298 (373)
T 2qol_A          240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLP---------------------PPMDCPAALYQLMLDCWQKDRNNRPKFE  298 (373)
T ss_dssp             HHHHHTTC-CTTTTCCHHHHHHHHHTTEECC---------------------CCTTCBHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCccccHHHHHHHHHHhCcChhhCcCHH
Confidence            478887 999998888777666554321111                     0124678899999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       299 ~i~~  302 (373)
T 2qol_A          299 QIVS  302 (373)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9886

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=97.20  E-value=0.0002  Score=64.86  Aligned_cols=62  Identities=19%  Similarity=0.253  Sum_probs=45.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..+......                     .....+++++.+||.+||..||.+|||+.
T Consensus       409 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~  467 (495)
T 1opk_A          409 LWEIATYGMSPYPGIDLSQVYELLEKDYRM---------------------ERPEGCPEKVYELMRACWQWNPSDRPSFA  467 (495)
T ss_dssp             HHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---------------------CCCCCCCHHHHHHHHHHcCcChhHCcCHH
Confidence            579998 99999987765544444321100                     01134789999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       468 el~~  471 (495)
T 1opk_A          468 EIHQ  471 (495)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9976

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.20  E-value=4.6e-05  Score=64.96  Aligned_cols=29  Identities=21%  Similarity=0.434  Sum_probs=26.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHH-cCcccc
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEAL-QHLFFK   88 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL-~HpfF~   88 (216)
                      .+++++.|||.+||++|     ||.|+| +||||+
T Consensus       307 ~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          307 QIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             hcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            46789999999999988     999999 999995

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.19  E-value=0.00042  Score=57.53  Aligned_cols=30  Identities=7%  Similarity=0.113  Sum_probs=27.4

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+++++.+||.+||..||.+|||+.|+++
T Consensus       255 ~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          255 DGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            357899999999999999999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=97.16  E-value=0.00021  Score=63.88  Aligned_cols=62  Identities=11%  Similarity=0.137  Sum_probs=46.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||++ |+.+|.+.+..+.+..+..  |...                   .....+++++.+||.+||..||.+|||+.
T Consensus       376 l~el~t~g~~P~~~~~~~~~~~~i~~--~~~~-------------------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~  434 (450)
T 1k9a_A          376 LWEIYSFGRVPYPRIPLKDVVPRVEK--GYKM-------------------DAPDGCPPAVYDVMKNCWHLDAATRPTFL  434 (450)
T ss_dssp             HHHHHTTTCCSSTTSCTTTHHHHHHT--TCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHH
Confidence            479998 9999998776666655543  2100                   01134789999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++++
T Consensus       435 ~l~~  438 (450)
T 1k9a_A          435 QLRE  438 (450)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=97.15  E-value=0.00011  Score=64.25  Aligned_cols=63  Identities=11%  Similarity=0.077  Sum_probs=45.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+....+..  |...                   ..-..++.++.+||.+||..||.+|||+.
T Consensus       286 l~ellt~~~~p~~~~~~~~~~~~~~~--~~~~-------------------~~p~~~~~~l~~li~~cl~~dp~~RPs~~  344 (373)
T 3c1x_A          286 LWELMTRGAPPYPDVNTFDITVYLLQ--GRRL-------------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFS  344 (373)
T ss_dssp             HHHHHTTSCCSCTTSCSSCHHHHHHT--TCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCcCCCCCCCCHHHHHHHHHc--CCCC-------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            478998 7888887766555554433  2110                   00124678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       345 ell~~  349 (373)
T 3c1x_A          345 ELVSR  349 (373)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=97.14  E-value=5.5e-05  Score=63.56  Aligned_cols=31  Identities=29%  Similarity=0.457  Sum_probs=28.6

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ...+.++.+||.+||..||.+|||+.++++|
T Consensus       270 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          270 PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            3578899999999999999999999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=97.13  E-value=0.00043  Score=64.53  Aligned_cols=68  Identities=18%  Similarity=0.191  Sum_probs=50.7

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+.+|.+.+..+.+..|..  |...                   .....+++++.+||.+||..||.+||++.
T Consensus       529 l~ellt~G~~Pf~~~~~~~~~~~i~~--~~~~-------------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~  587 (613)
T 2ozo_A          529 MWEALSYGQKPYKKMKGPEVMAFIEQ--GKRM-------------------ECPPECPPELYALMSDCWIYKWEDRPDFL  587 (613)
T ss_dssp             HHHHHTTSCCTTTTCCSHHHHHHHHT--TCCC-------------------CCCTTCCHHHHHHHHHTTCSSTTTSCCHH
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHH
Confidence            579998 9999999887777766644  2110                   01234789999999999999999999998


Q ss_pred             HH---HcCccccC
Q 042950           80 EA---LQHLFFKR   89 (216)
Q Consensus        80 ea---L~HpfF~~   89 (216)
                      ++   |++-|+..
T Consensus       588 ~l~~~L~~~~~~~  600 (613)
T 2ozo_A          588 TVEQRMRACYYSL  600 (613)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            87   45555543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=97.10  E-value=0.00021  Score=61.68  Aligned_cols=72  Identities=11%  Similarity=0.103  Sum_probs=44.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.+|.+......+..+......+....+...         .+.  ...++.++.+||..||..||.+||++.+
T Consensus       251 l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~  319 (364)
T 3op5_A          251 MIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDK---------CFP--AANAPGEIAKYMETVKLLDYTEKPLYEN  319 (364)
T ss_dssp             HHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHH---------HSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred             HHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHH---------hcc--cccCHHHHHHHHHHHhcCCCCCCCCHHH
Confidence            58999999999864433333222221111111111000         000  1356889999999999999999999988


Q ss_pred             HHc
Q 042950           81 ALQ   83 (216)
Q Consensus        81 aL~   83 (216)
                      +++
T Consensus       320 l~~  322 (364)
T 3op5_A          320 LRD  322 (364)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.03  E-value=3.5e-05  Score=65.16  Aligned_cols=30  Identities=13%  Similarity=0.133  Sum_probs=26.9

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHL   85 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~Hp   85 (216)
                      .+.++.+||.+||..||.+|||+.|+++|-
T Consensus       281 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          281 SLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            456789999999999999999999999874

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=97.03  E-value=5.8e-05  Score=63.78  Aligned_cols=32  Identities=19%  Similarity=0.188  Sum_probs=28.3

Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcCcccc
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQHLFFK   88 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~   88 (216)
                      +.++.+||.+||..||.+|||+.|+++|-.-.
T Consensus       278 ~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          278 VEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             HHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            46789999999999999999999999986543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=97.02  E-value=0.00057  Score=57.82  Aligned_cols=30  Identities=7%  Similarity=0.113  Sum_probs=27.4

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..++.++.+||.+||..||.+|||+.++++
T Consensus       286 ~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          286 DGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            357899999999999999999999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=96.99  E-value=0.00064  Score=56.42  Aligned_cols=30  Identities=13%  Similarity=0.428  Sum_probs=27.6

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..+++++.+||.+||..||.+|||+.++++
T Consensus       266 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            457899999999999999999999999885

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=96.94  E-value=0.00029  Score=58.44  Aligned_cols=28  Identities=18%  Similarity=0.160  Sum_probs=25.5

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      .+.++.+||.+||..||.+|||+.++++
T Consensus       268 ~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          268 TLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             HHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            4567899999999999999999999986

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=96.86  E-value=5.9e-05  Score=64.35  Aligned_cols=27  Identities=11%  Similarity=0.033  Sum_probs=24.3

Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           58 KDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        58 ~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ..+.+||.+||..||++|||+.|+++.
T Consensus       265 ~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          265 RVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            467899999999999999999999864

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=96.85  E-value=0.00027  Score=58.05  Aligned_cols=35  Identities=29%  Similarity=0.359  Sum_probs=31.8

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++.++.+||.+||..||.+|||+.|+++|.+.-.
T Consensus       239 ~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          239 IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            46889999999999999999999999999987754

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=96.78  E-value=0.0013  Score=55.38  Aligned_cols=30  Identities=13%  Similarity=0.231  Sum_probs=27.5

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHc
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQ   83 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~   83 (216)
                      ..++.++.+||.+||..||.+|||+.++++
T Consensus       274 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          274 DKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            357899999999999999999999999985

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=96.72  E-value=0.00044  Score=58.28  Aligned_cols=29  Identities=17%  Similarity=0.210  Sum_probs=26.5

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      +++++.+||.+||..||.+|||+.++++|
T Consensus       297 ~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          297 CLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            45678999999999999999999999986

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=96.40  E-value=0.00067  Score=57.34  Aligned_cols=28  Identities=11%  Similarity=0.007  Sum_probs=25.6

Q ss_pred             CHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           57 SKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        57 s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      ...+.+||.+||..||.+|||+.++++|
T Consensus       303 ~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          303 LRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             HHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            4578899999999999999999999986

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=96.06  E-value=0.0017  Score=54.26  Aligned_cols=34  Identities=21%  Similarity=0.453  Sum_probs=29.5

Q ss_pred             CCCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           54 PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        54 ~~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      +.+++++.+||.+||..||.+|||+.++++  ++..
T Consensus       246 ~~~~~~l~~li~~~l~~dP~~Rps~~~l~~--~L~~  279 (310)
T 3s95_A          246 PNCPPSFFPITVRCCDLDPEKRPSFVKLEH--WLET  279 (310)
T ss_dssp             TTCCTTHHHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred             CCCCHHHHHHHHHHccCChhhCcCHHHHHH--HHHH
Confidence            356788999999999999999999999987  5554

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=94.65  E-value=0.0028  Score=59.55  Aligned_cols=34  Identities=21%  Similarity=0.124  Sum_probs=30.6

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .++.+.+||.+||..||.+|+++.++|.|+|+..
T Consensus       293 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          293 TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            3578899999999999999999999999999864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=83.69  E-value=0.031  Score=47.79  Aligned_cols=30  Identities=7%  Similarity=0.080  Sum_probs=23.6

Q ss_pred             CCHHHHHHHHhccccCCCCCCCHHHHHcCc
Q 042950           56 ASKDAINLIESLCSWDPCKRPTAAEALQHL   85 (216)
Q Consensus        56 ~s~~~~dLL~~mL~~dP~kR~ta~eaL~Hp   85 (216)
                      .++.+.+|+..||..+|.+|++..+.|.+.
T Consensus       304 ~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~  333 (365)
T 3e7e_A          304 HLDMWNEFFHVMLNIPDCHHLPSLDLLRQK  333 (365)
T ss_dssp             SHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence            356778999999999999998766555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	216
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-19
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-19
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-17
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-17
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-16
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-16
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-15
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-15
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-15
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-14
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	9e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-13
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-12
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-12
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	8e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	9e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-07
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-07
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	9e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	9e-07
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-07
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-06
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	7e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-05
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	9e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-04
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-04
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	8e-04

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.3 bits (197), Expect = 9e-19
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 7/107 (6%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM------LSGVNLSELMP 54
           +AELLL  P   G  + +Q+ +I   LG PT + W D              G+ L  +  
Sbjct: 191 LAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFS 250

Query: 55  SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVP 101
           +A  D ++LI+ L  ++PC R TA +AL+  +F      P     +P
Sbjct: 251 AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN-RPGPTPGCQLP 296

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.3 bits (197), Expect = 9e-19
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELM 53
            AE++  R LF G  E +Q+++I   LG P    W                +  + S+++
Sbjct: 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV 252

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIR 98
           P   +D  +L+  +  +DP KR +A  AL H FF+      PH+R
Sbjct: 253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 76.5 bits (187), Expect = 2e-17
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD-------ELRQAMLSGVNLSELM 53
            AE++   PLF G  EA+Q+ +I  +LG P   +W +       +    +   +     +
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
               +  I+L+  +   DP +R TA +AL+H +FK
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 8e-17
 Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM-----LSGVNLSELMPS 55
            AE+   +PLF+G+ + +Q+ KI  V+G P  + W  ++          S   + + +  
Sbjct: 205 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 264

Query: 56  ASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
             +   +L+    +++P KR +A  AL H +F+
Sbjct: 265 IDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 2e-16
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD------ELRQAMLSGVNLSELM- 53
           +AELLL +P+F G    +Q+ +I  VLG PT +   +      E +   +     +++  
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 272

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           P    +AI L   L  + P  R T  EA  H FF 
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (177), Expect = 5e-16
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 10/103 (9%)

Query: 1   MAELL-LFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELR-------QAMLSGVNLSEL 52
            AEL    RPLF G D  +Q+ +I  +LG PT + W    +           +  +L  +
Sbjct: 192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV 251

Query: 53  MPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPP 95
           +P  +    +L+++L   +P +R +A EALQH +F    + PP
Sbjct: 252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD--FCPP 292

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 1e-15
 Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 9/98 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD---------ELRQAMLSGVNLSE 51
           +AE+L  RP+F G    +Q+  I  +LG+P+ +              L     + V  + 
Sbjct: 203 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR 262

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           L P+A   A++L++ + +++P KR    +AL H + ++
Sbjct: 263 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 2e-15
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 9/98 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM---------LSGVNLSE 51
           MAELL  R LF GTD  +Q+  I  ++G P  +       ++          +  +N + 
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN 268

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR 89
           +   A+  A++L+E +   D  KR TAA+AL H +F +
Sbjct: 269 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 5e-15
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 10/98 (10%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD----------ELRQAMLSGVNLS 50
           MAE+    P+ QG  E  Q+  I  + G+ T + W +          EL +     V   
Sbjct: 212 MAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDR 271

Query: 51  ELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
                    A++LI+ L   DP +R  + +AL H FF 
Sbjct: 272 LKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 309

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 6e-15
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM---------LSGVNLSE 51
           MAE++  + LF+G+D  +Q+ +I  V G P  +                   L   + + 
Sbjct: 209 MAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS 268

Query: 52  LMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
           ++ +AS  A+NL+E +   D  +R TA EAL H +F+
Sbjct: 269 ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 305

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 67.6 bits (164), Expect = 5e-14
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 16/104 (15%)

Query: 1   MAELLLFR-PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM---------------L 44
           +A ++  + P F G D  +Q+ +I  VLG   +  + D+    +                
Sbjct: 220 LASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW 279

Query: 45  SGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
                SE     S +A++ ++ L  +D   R TA EA++H +F 
Sbjct: 280 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.9 bits (162), Expect = 9e-14
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 21/121 (17%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAM--------LSGVNLSEL 52
           M E++  + LF G D  +Q  K+   LG P  +                   +G+   +L
Sbjct: 208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267

Query: 53  MPSA------------SKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSV 100
            P +            +  A +L+  +   DP KR +  +ALQH +     Y P  + + 
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV-WYDPAEVEAP 326

Query: 101 P 101
           P
Sbjct: 327 P 327

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 63.9 bits (155), Expect = 9e-13
 Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 19/102 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
              LL     F G ++ E +  + S   N    ++                     S+D 
Sbjct: 215 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF------------------SGISEDG 256

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKRCLYAPPHIRSVPA 102
            + I  L   DP  R T  +AL+H +      AP     +P+
Sbjct: 257 KDFIRKLLLADPNTRMTIHQALEHPWLTP-GNAPGRDSQIPS 297

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 5e-12
 Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 18/91 (19%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           +  LL     F      + +  I +       +++                     S +A
Sbjct: 193 VYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF------------------KEISIEA 234

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKRCL 91
           ++ ++ L   +   R TA+EALQH + K+ +
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKI 265

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 60.9 bits (147), Expect = 8e-12
 Identities = 21/89 (23%), Positives = 27/89 (30%), Gaps = 18/89 (20%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           M  LL   P F    +   +  I S         W                     S   
Sbjct: 205 MYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW------------------DDYSDTV 246

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKR 89
            +L+       P KR TA EAL H FF++
Sbjct: 247 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 60.8 bits (147), Expect = 9e-12
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 18/88 (20%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
              LL     F G D+ E +  +         D++                   S S +A
Sbjct: 218 GYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF------------------SSVSPEA 259

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFK 88
            + I++L   +P KR T  +AL+H + K
Sbjct: 260 KDFIKNLLQKEPRKRLTVHDALEHPWLK 287

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.0 bits (145), Expect = 2e-11
 Identities = 20/88 (22%), Positives = 27/88 (30%), Gaps = 18/88 (20%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
              LL   P F   ++A+   +I           W                     S  A
Sbjct: 199 AYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW------------------DDISDSA 240

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFK 88
            + I  L   DP KR T  +ALQH +  
Sbjct: 241 KDFIRHLMEKDPEKRFTCEQALQHPWIA 268

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 7e-11
 Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 19/90 (21%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
             E++   P +   +    +Y I +  G P + +                      S   
Sbjct: 206 AIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNP------------------EKLSAIF 246

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKRC 90
            + +      D  KR +A E LQH F K  
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 2e-10
 Identities = 18/112 (16%), Positives = 32/112 (28%), Gaps = 22/112 (19%)

Query: 1   MAELLLFRPLFQGTDEAE-QMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSA--- 56
           + E+ + R      D  E ++   C V G+              LS   +    P A   
Sbjct: 193 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFE 252

Query: 57  ------------------SKDAINLIESLCSWDPCKRPTAAEALQHLFFKRC 90
                             S +  + +      +P +R    + + H F KR 
Sbjct: 253 LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 2e-10
 Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 18/88 (20%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
              LL     F G  + E +  + +V      + +                   + S  A
Sbjct: 206 TYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF------------------SNTSALA 247

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFK 88
            + I  L   DP KR T  ++LQH + K
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 275

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.6 bits (135), Expect = 3e-10
 Identities = 20/121 (16%), Positives = 39/121 (32%), Gaps = 26/121 (21%)

Query: 1   MAELLLFRPLFQG------TDEAEQMYKICSVLGNPTMDSWAD----------------- 37
           + EL+    LF+       T + + + +I  +LG        +                 
Sbjct: 219 IFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNI 278

Query: 38  -ELRQAMLSGV--NLSELMPSASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP 94
            +L+   L  V     +     +K+  + +  +   DP KR  A   + H + K  L   
Sbjct: 279 SKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME 338

Query: 95  P 95
            
Sbjct: 339 E 339

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 4e-09
 Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 19/89 (21%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + E+    P     +    + KI      PT+                        S + 
Sbjct: 205 LIEMAEIEPPHHELNPMRVLLKIAKS-EPPTLAQP------------------SRWSSNF 245

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKR 89
            + ++     +   R T ++ LQH F   
Sbjct: 246 KDFLKKCLEKNVDARWTTSQLLQHPFVTV 274

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 5e-09
 Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 22/88 (25%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
             E L+ +P F+     E   +I       T   +                     ++ A
Sbjct: 194 CYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFV--------------------TEGA 231

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFK 88
            +LI  L   +P +RP   E L+H +  
Sbjct: 232 RDLISRLLKHNPSQRPMLREVLEHPWIT 259

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.7 bits (126), Expect = 6e-09
 Identities = 16/89 (17%), Positives = 26/89 (29%), Gaps = 20/89 (22%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
             EL   +P     +    +Y I                        + +      S+  
Sbjct: 204 CIELAERKPPLFNMNAMSALYHIAQ--------------------NESPALQSGHWSEYF 243

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKR 89
            N ++S     P  RPT+   L+H F  R
Sbjct: 244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 7e-09
 Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 14/94 (14%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           M  LL   P F           + + +     +                +      S++ 
Sbjct: 203 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF--------------PNPEWSEVSEEV 248

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKRCLYAP 94
             LI +L   +P +R T  E + H +  +    P
Sbjct: 249 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 282

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 8e-09
 Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 19/88 (21%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           M E+      +     A Q+Y+                    + SGV  +     A  + 
Sbjct: 202 MLEMATSEYPYSECQNAAQIYRR-------------------VTSGVKPASFDKVAIPEV 242

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFK 88
             +IE     +  +R +  + L H FF+
Sbjct: 243 KEIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 1e-08
 Identities = 9/91 (9%), Positives = 25/91 (27%), Gaps = 19/91 (20%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           +  +L     +    ++ Q Y          ++ W                         
Sbjct: 196 LTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLNPW------------------KKIDSAP 236

Query: 61  INLIESLCSWDPCKRPTAAEALQHLFFKRCL 91
           + L+  +   +P  R T  +  +  ++ + L
Sbjct: 237 LALLHKILVENPSARITIPDIKKDRWYNKPL 267

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 9e-08
 Identities = 25/107 (23%), Positives = 34/107 (31%), Gaps = 23/107 (21%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           M ELL     F    E     +I   +                             S  A
Sbjct: 222 MYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP------------------QEMSALA 263

Query: 61  INLIESLCSWDPCKRP-----TAAEALQHLFFKRCLYAPPHIRSVPA 102
            +LI+ L   DP KR       A E  +HLFF++  +     + VPA
Sbjct: 264 KDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPA 310

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 23/89 (25%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + E+L+ +  F G DE E  + I     NP    W                      K+A
Sbjct: 193 LYEMLIGQSPFHGQDEEELFHSIRM--DNPFYPRWL--------------------EKEA 230

Query: 61  INLIESLCSWDPCKRPTAA-EALQHLFFK 88
            +L+  L   +P KR     +  QH  F+
Sbjct: 231 KDLLVKLFVREPEKRLGVRGDIRQHPLFR 259

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 13/86 (15%), Positives = 23/86 (26%), Gaps = 21/86 (24%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + EL    P F    + E   KI                            +    S + 
Sbjct: 204 LYELCALMPPFTAFSQKELAGKIREG---------------------KFRRIPYRYSDEL 242

Query: 61  INLIESLCSWDPCKRPTAAEALQHLF 86
             +I  + +     RP+  E L++  
Sbjct: 243 NEIITRMLNLKDYHRPSVEEILENPL 268

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 3e-07
 Identities = 17/94 (18%), Positives = 25/94 (26%), Gaps = 28/94 (29%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + +L+   P F+  +E     KI                                    A
Sbjct: 200 IYQLVAGLPPFRAGNEYLIFQKIIK--LEYDFPEKF--------------------FPKA 237

Query: 61  INLIESLCSWDPCKRPTAAEA------LQHLFFK 88
            +L+E L   D  KR    E         H FF+
Sbjct: 238 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 3e-07
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           +++I S+ G P       EL + +  G  L E   +   +  +L+       P +RP+ A
Sbjct: 216 LWEIVSLGGTPYCGMTCAELYEKLPQGYRL-EKPLNCDDEVYDLMRQCWREKPYERPSFA 274

Query: 80  EALQHL 85
           + L  L
Sbjct: 275 QILVSL 280

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 9e-07
 Identities = 9/35 (25%), Positives = 14/35 (40%)

Query: 54  PSASKDAINLIESLCSWDPCKRPTAAEALQHLFFK 88
              S +  +LI    +  P  RPT  E   H + +
Sbjct: 225 QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.2 bits (109), Expect = 9e-07
 Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 27/93 (29%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + E+L     F  ++  +   KI +         +                     ++D 
Sbjct: 191 IYEMLAGYTPFYDSNTMKTYEKILN--AELRFPPFF--------------------NEDV 228

Query: 61  INLIESLCSWDPCKRP-----TAAEALQHLFFK 88
            +L+  L + D  +R         +   H +FK
Sbjct: 229 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK 261

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 45.9 bits (108), Expect = 9e-07
 Identities = 13/84 (15%), Positives = 22/84 (26%), Gaps = 18/84 (21%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + E+L   P F G       Y+       P                   S      S D 
Sbjct: 204 LYEVLTGEPPFTGDSPVSVAYQHVREDPIP------------------PSARHEGLSADL 245

Query: 61  INLIESLCSWDPCKRPTAAEALQH 84
             ++    + +P  R   A  ++ 
Sbjct: 246 DAVVLKALAKNPENRYQTAAEMRA 269

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 9e-07
 Identities = 18/93 (19%), Positives = 26/93 (27%), Gaps = 27/93 (29%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           M E++  R  F   D       I                                 S +A
Sbjct: 195 MYEMMCGRLPFYNQDHERLFELILM--EEIRFPRTL--------------------SPEA 232

Query: 61  INLIESLCSWDPCKRP-----TAAEALQHLFFK 88
            +L+  L   DP +R       A E ++H FF 
Sbjct: 233 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 1e-06
 Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           M++I      P      +++   + +G  L  + P+      +L+    ++DP +RP   
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFT 257

Query: 80  EALQHL 85
           E    L
Sbjct: 258 ELKAQL 263

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 3e-06
 Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 16/85 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + EL+  +  +   +  +Q+  +               + +  LS  +LS++  +  K  
Sbjct: 199 LYELMTGQLPYSNINNRDQIIFM---------------VGRGYLSP-DLSKVRSNCPKAM 242

Query: 61  INLIESLCSWDPCKRPTAAEALQHL 85
             L+         +RP   + L  +
Sbjct: 243 KRLMAECLKKKRDERPLFPQILASI 267

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 4e-06
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           +++I S+  +P      DE     L            + +    +      +P +RPT +
Sbjct: 226 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 285

Query: 80  EALQHL 85
           E ++HL
Sbjct: 286 ELVEHL 291

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 5e-06
 Identities = 8/66 (12%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           +++I S    P       ++   +  G  + +           ++++    D   RP+  
Sbjct: 190 LWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-DAPDGCPPAVYEVMKNCWHLDAAMRPSFL 248

Query: 80  EALQHL 85
           +  + L
Sbjct: 249 QLREQL 254

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 6e-06
 Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 1/68 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           ++++ +    P     A E+   +  G  L    P  + D   ++      D   RP   
Sbjct: 203 VWELMTFGSKPYDGIPASEISSILEKGERL-PQPPICTIDVYMIMVKCWMIDADSRPKFR 261

Query: 80  EALQHLFF 87
           E +     
Sbjct: 262 ELIIEFSK 269

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 6e-06
 Identities = 11/66 (16%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           +++I ++ G+P      +EL + +  G  + +   + + +   ++       P +RPT  
Sbjct: 227 LWEIFTLGGSPYPGVPVEELFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFK 285

Query: 80  EALQHL 85
           + ++ L
Sbjct: 286 QLVEDL 291

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 6e-06
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           M+++ S    P  +    E+ + + +G  L      AS     ++       P  RP  +
Sbjct: 192 MWEVFSEGKIPYENRSNSEVVEDISTGFRL-YKPRLASTHVYQIMNHCWKERPEDRPAFS 250

Query: 80  EALQHL 85
             L+ L
Sbjct: 251 RLLRQL 256

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 7e-06
 Identities = 12/66 (18%), Positives = 28/66 (42%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           +++I S+  NP      D     ++      +    A+++   +++S  ++D  KRP+  
Sbjct: 256 LWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFP 315

Query: 80  EALQHL 85
                L
Sbjct: 316 NLTSFL 321

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           M++I S+   P       E  + +  G+ L      AS+    ++ S       +RPT  
Sbjct: 191 MWEIYSLGKMPYERFTNSETAEHIAQGLRL-YRPHLASEKVYTIMYSCWHEKADERPTFK 249

Query: 80  EALQHL 85
             L ++
Sbjct: 250 ILLSNI 255

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 1e-05
 Identities = 13/82 (15%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           M+++ +    P  +    E+ +A+  G  L             L+      +  +RP  A
Sbjct: 203 MWEVMTYGERPYWELSNHEVMKAINDGFRL-PTPMDCPSAIYQLMMQCWQQERARRPKFA 261

Query: 80  EALQHLFFKRCLYAPPHIRSVP 101
           + +  L   + + AP  ++++ 
Sbjct: 262 DIVSIL--DKLIRAPDSLKTLA 281

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.5 bits (99), Expect = 2e-05
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           +++I S    P      +E+   +  G N+     +   +  NL+    S  P  RP+  
Sbjct: 232 LWEIFSYGLQPYYGMAHEEVIYYVRDG-NILACPENCPLELYNLMRLCWSKLPADRPSFC 290

Query: 80  EALQHL 85
              + L
Sbjct: 291 SIHRIL 296

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           M++  S    P       E+   +  G  +        ++  +L+    ++D   RP  A
Sbjct: 200 MWEAFSYGQKPYRGMKGSEVTAMLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFA 258

Query: 80  E---ALQHLFFK 88
                L++ ++ 
Sbjct: 259 AVELRLRNYYYD 270

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 2e-05
 Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 2/86 (2%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADE-LRQAMLSGVNLSELMPSASKD 59
             E+     +  G  E  Q+     V  +P+++        Q +   +        A + 
Sbjct: 208 FWEIARRCSIG-GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRV 266

Query: 60  AINLIESLCSWDPCKRPTAAEALQHL 85
              ++      +   R TA    + L
Sbjct: 267 MAKIMRECWYANGAARLTALRIKKTL 292

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 10/72 (13%), Positives = 22/72 (30%), Gaps = 4/72 (5%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           M++  S    P       E+   +  G  + E  P    +   L+     +    RP   
Sbjct: 202 MWEALSYGQKPYKKMKGPEVMAFIEQGKRM-ECPPECPPELYALMSDCWIYKWEDRPDFL 260

Query: 80  E---ALQHLFFK 88
                ++  ++ 
Sbjct: 261 TVEQRMRACYYS 272

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.3 bits (96), Expect = 4e-05
 Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 24/107 (22%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + +LL     F+     ++       L                       EL  S S + 
Sbjct: 196 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-------------------VELPDSFSPEL 236

Query: 61  INLIESLCSWDPCKRPT-----AAEALQHLFFKRCLYAPPHIRSVPA 102
            +L+E L   D  +R       A E  +  FF+   +    ++  P 
Sbjct: 237 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 283

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           +++I +   +P       ++ + +     + E      +    L+ +   W+P  RP+ A
Sbjct: 206 LWEIATYGMSPYPGIDLSQVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSDRPSFA 264

Query: 80  EALQHL 85
           E  Q  
Sbjct: 265 EIHQAF 270

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 4e-05
 Identities = 9/66 (13%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           +++I ++   P      +++ + ++ G  L +   +       L+     ++P  RP+  
Sbjct: 225 LWEIATLAEQPYQGLSNEQVLRFVMEG-GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 283

Query: 80  EALQHL 85
           E +  +
Sbjct: 284 EIISSI 289

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.3 bits (96), Expect = 4e-05
 Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 27/93 (29%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           + E+    P F      +   KI S  G     S                      S D 
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVS--GKVRFPSHF--------------------SSDL 265

Query: 61  INLIESLCSWDPCKR-----PTAAEALQHLFFK 88
            +L+ +L   D  KR         +   H +F 
Sbjct: 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 5e-05
 Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 3/80 (3%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           M+++ S    P  D    ++  A+     L             L+      D   RP   
Sbjct: 223 MWEVMSYGERPYWDMTNQDVINAIEQDYRL-PPPMDCPSALHQLMLDCWQKDRNHRPKFG 281

Query: 80  EALQHLFFKRCLYAPPHIRS 99
           + +  L   + +  P  +++
Sbjct: 282 QIVNTL--DKMIRNPNSLKA 299

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 9e-05
 Identities = 8/66 (12%), Positives = 21/66 (31%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           ++++ +    P +     ++   +              +D  N++    +  P  RPT  
Sbjct: 204 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263

Query: 80  EALQHL 85
                L
Sbjct: 264 ALRDFL 269

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 8/66 (12%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           ++++ +    P  D    ++   +L G  L             ++          RP+ +
Sbjct: 224 LWELMTRGAPPYPDVNTFDITVYLLQGRRL-LQPEYCPDPLYEVMLKCWHPKAEMRPSFS 282

Query: 80  EALQHL 85
           E +  +
Sbjct: 283 ELVSRI 288

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 12/66 (18%), Positives = 28/66 (42%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           ++++ S+  +P      D     M+           A  +  +++++    DP KRPT  
Sbjct: 237 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 296

Query: 80  EALQHL 85
           + +Q +
Sbjct: 297 QIVQLI 302

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           + +I +    P       E+ Q +  G  +     +  ++   L+       P  RPT  
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQNLERGYRM-VRPDNCPEELYQLMRLCWKERPEDRPTFD 258

Query: 80  EALQHL--FF 87
                L  FF
Sbjct: 259 YLRSVLEDFF 268

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.9 bits (87), Expect = 5e-04
 Identities = 11/92 (11%), Positives = 24/92 (26%), Gaps = 17/92 (18%)

Query: 1   MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDA 60
           +    L    +QG   A +  K               E          +  L      + 
Sbjct: 203 LMYFNLGSLPWQGLKAATKRQKY--------------ERISEKKMSTPIEVLCKGYPSEF 248

Query: 61  INLIESLCSWDPCKRPTAA---EALQHLFFKR 89
              +    S     +P  +   +  ++LF ++
Sbjct: 249 ATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 8e-04
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 20  MYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA 79
           + ++ +    P       E+   +  G  +    P   +   +L+      +P +RPT  
Sbjct: 204 LTELTTKGRVPYPGMVNREVLDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTFE 262

Query: 80  EALQHL 85
                L
Sbjct: 263 YLQAFL 268

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	216
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.63
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.6
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.59
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.56
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.54
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.5
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.48
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.47
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.44
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.36
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.36
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.34
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.23
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.22
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.21
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.21
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.2
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.18
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.16
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.15
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.13
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.12
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.12
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.1
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.07
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.07
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.07
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.06
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.04
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.03
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.02
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	98.99
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	98.96
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.9
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.87
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	98.52
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.33
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	98.28
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.28
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.27
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	98.23
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.22
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.18
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.17
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	98.17
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.07
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.03
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.02
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	98.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	97.98
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	97.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	97.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.89
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	97.88
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	97.83
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	97.82
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.72
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	97.6
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	97.49
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	96.81
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	96.26

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.8e-17  Score=136.29  Aligned_cols=92  Identities=33%  Similarity=0.615  Sum_probs=79.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc------cccCCCccccCCCCCHHHHHHHHhccccCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA------MLSGVNLSELMPSASKDAINLIESLCSWDPCK   74 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~k   74 (216)
                      ||||++|+++|.+.++.+++.+|++.+|+|..+.|.......      .....++..+++.++++++|||.+||++||++
T Consensus       191 l~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~  270 (299)
T d1ua2a_         191 LAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA  270 (299)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTT
T ss_pred             HHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhh
Confidence            589999999999999999999999999999988886554443      33345566677789999999999999999999


Q ss_pred             CCCHHHHHcCccccCCCC
Q 042950           75 RPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        75 R~ta~eaL~HpfF~~~~~   92 (216)
                      |+||.|||+||||++.+.
T Consensus       271 R~sa~e~L~Hp~f~~~p~  288 (299)
T d1ua2a_         271 RITATQALKMKYFSNRPG  288 (299)
T ss_dssp             SCCHHHHHTSGGGTSSSC
T ss_pred             CcCHHHHhCCHhhCCCCC
Confidence            999999999999998544

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.2e-15  Score=131.46  Aligned_cols=124  Identities=23%  Similarity=0.298  Sum_probs=91.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc------cccCCCcccc-CCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA------MLSGVNLSEL-MPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~------~~~~~~l~~~-~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      +|||++|++||.+.+..+++.+|++.+|.+..+.|.......      ......+.+. .+..+++++|||.+||++||.
T Consensus       213 l~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~  292 (350)
T d1q5ka_         213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT  292 (350)
T ss_dssp             HHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGG
T ss_pred             EEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChh
Confidence            589999999999999999999999999999998887543321      2222333332 345899999999999999999


Q ss_pred             CCCCHHHHHcCccccCCCCCCCCCCCCccccchhhhhhhhhccccCCcCCCCCCCCCCCCHHHhhhccCchhhh
Q 042950           74 KRPTAAEALQHLFFKRCLYAPPHIRSVPAVATTTRGMLKQQGAGIEAEALPNPNIAKQLSPLDIIMVVQPKNSV  147 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~el~~~~q~~k~~  147 (216)
                      +|+||.|+|+||||+++.....                      +.++.... +..++|+.+|++.+++....+
T Consensus       293 ~R~ta~e~L~Hp~f~~~~~~~~----------------------~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~  343 (350)
T d1q5ka_         293 ARLTPLEACAHSFFDELRDPNV----------------------KLPNGRDT-PALFNFTTQELSSNPPLATIL  343 (350)
T ss_dssp             GSCCHHHHHTSGGGGGGGCTTC----------------------CCTTSCCC-CCCCCCCHHHHTTCGGGHHHH
T ss_pred             HCcCHHHHhcCHhhccccCCCC----------------------CCCCCCCC-CccCCCCHhhccCCccccccC
Confidence            9999999999999998422111                      12222222 336899999999777765433

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=6e-16  Score=130.32  Aligned_cols=91  Identities=25%  Similarity=0.483  Sum_probs=77.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-----cccCCCccccCCCCCHHHHHHHHhccccCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-----MLSGVNLSELMPSASKDAINLIESLCSWDPCKR   75 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-----~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR   75 (216)
                      ||||++|++||.+.+..+++.+|++++|.+....|+.....+     ......+..+...+++++.|||.+||++||.+|
T Consensus       205 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R  284 (305)
T d1blxa_         205 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR  284 (305)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTS
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHC
Confidence            589999999999999999999999999999988886544333     233445556667789999999999999999999


Q ss_pred             CCHHHHHcCccccCCC
Q 042950           76 PTAAEALQHLFFKRCL   91 (216)
Q Consensus        76 ~ta~eaL~HpfF~~~~   91 (216)
                      +||.|+|+||||+++.
T Consensus       285 ~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         285 ISAYSALSHPYFQDLE  300 (305)
T ss_dssp             CCHHHHHTSGGGTTCC
T ss_pred             cCHHHHhcChhhcCch
Confidence            9999999999999853

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.56  E-value=1.5e-15  Score=126.99  Aligned_cols=89  Identities=29%  Similarity=0.576  Sum_probs=77.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      ||||++|++||.+.++.+++.+|+..+|.+....|.......       ......+...++.+++++.|||++||++||+
T Consensus       191 l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~  270 (286)
T d1ob3a_         191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPN  270 (286)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTT
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChh
Confidence            589999999999999999999999999999988887665544       3344556667778999999999999999999


Q ss_pred             CCCCHHHHHcCccccC
Q 042950           74 KRPTAAEALQHLFFKR   89 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~   89 (216)
                      +|+||.|+|+||||++
T Consensus       271 ~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         271 QRITAKQALEHAYFKE  286 (286)
T ss_dssp             TSCCHHHHHTSGGGGC
T ss_pred             HCcCHHHHhcCcccCc
Confidence            9999999999999974

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.5e-15  Score=126.64  Aligned_cols=95  Identities=29%  Similarity=0.544  Sum_probs=78.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc-------cccCCCccccCCCCCHHHHHHHHhccccCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA-------MLSGVNLSELMPSASKDAINLIESLCSWDPC   73 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~-------~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~   73 (216)
                      ||||++|+.||.+.+..+++.+|+..+|.+....|......+       ......+...++.++.++.|||.+||++||.
T Consensus       193 ly~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~  272 (298)
T d1gz8a_         193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPN  272 (298)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTT
T ss_pred             hhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChh
Confidence            589999999999999999999999999999988887655443       2223334445667899999999999999999


Q ss_pred             CCCCHHHHHcCccccCCCCCCC
Q 042950           74 KRPTAAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        74 kR~ta~eaL~HpfF~~~~~~~~   95 (216)
                      +|+|+.|+|+||||+++...-|
T Consensus       273 ~R~t~~ell~H~ff~~~~~p~p  294 (298)
T d1gz8a_         273 KRISAKAALAHPFFQDVTKPVP  294 (298)
T ss_dssp             TSCCHHHHHTSGGGTTCCCCCC
T ss_pred             HCcCHHHHhCCHhhccCCCCCC
Confidence            9999999999999998644433

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=7.6e-15  Score=125.62  Aligned_cols=90  Identities=33%  Similarity=0.467  Sum_probs=75.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHH---------hhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADEL---------RQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~---------~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|++||.|.++.+++..|+...|.+..+.+....         .+.......+...+..++++++|||.+||++|
T Consensus       209 l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~d  288 (348)
T d2gfsa1         209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD  288 (348)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCC
Confidence            589999999999999999999999999998876553211         11244455666667789999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+||.|||+||||+++
T Consensus       289 P~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         289 SDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             GGGSCCHHHHHTSGGGTTT
T ss_pred             hhhCcCHHHHhcCHhhCCC
Confidence            9999999999999999974

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.2e-14  Score=123.01  Aligned_cols=90  Identities=31%  Similarity=0.448  Sum_probs=78.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHH---------HhhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADE---------LRQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~---------~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      ||||++|++||.+.+..+++..+..+.|.++.+.|...         ..++......+..++..++++++|||.+||++|
T Consensus       209 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~d  288 (346)
T d1cm8a_         209 MAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLD  288 (346)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCC
Confidence            58999999999999999999999999999988776532         122355667778888889999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+||.|||+||||+++
T Consensus       289 P~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         289 AEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             TTTSCCHHHHHHSGGGTTT
T ss_pred             hhHCcCHHHHhcChhhCcC
Confidence            9999999999999999984

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.4e-14  Score=122.01  Aligned_cols=90  Identities=28%  Similarity=0.528  Sum_probs=76.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHH---------HHhhccccCCCccccCCCCCHHHHHHHHhccccC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWAD---------ELRQAMLSGVNLSELMPSASKDAINLIESLCSWD   71 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~---------~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~d   71 (216)
                      +|||++|++||.+.+..++...+..+++.+.......         ....+.....++...++.+++++++||.+||++|
T Consensus       203 l~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  282 (345)
T d1pmea_         203 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN  282 (345)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSS
T ss_pred             ehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCC
Confidence            5899999999999999999999999999988765432         1223344556677778889999999999999999


Q ss_pred             CCCCCCHHHHHcCccccCC
Q 042950           72 PCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        72 P~kR~ta~eaL~HpfF~~~   90 (216)
                      |.+|+||.|||+||||+..
T Consensus       283 P~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         283 PHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             TTTSCCHHHHHTSGGGTTT
T ss_pred             hhHCcCHHHHhcCHhhccC
Confidence            9999999999999999873

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=4.1e-14  Score=117.80  Aligned_cols=89  Identities=30%  Similarity=0.531  Sum_probs=73.3

Q ss_pred             CcccccCCC-CCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccc-------cCCCccccCCCCCHHHHHHHHhccccCC
Q 042950            1 MAELLLFRP-LFQGTDEAEQMYKICSVLGNPTMDSWADELRQAML-------SGVNLSELMPSASKDAINLIESLCSWDP   72 (216)
Q Consensus         1 L~ELltG~p-lF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~-------~~~~l~~~~~~~s~~~~dLL~~mL~~dP   72 (216)
                      +|||++|+. +|.+.+..+++.+|....|.+....|.........       ....+....+..++++.|||.+||++||
T Consensus       192 l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP  271 (292)
T d1unla_         192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP  271 (292)
T ss_dssp             HHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSG
T ss_pred             HHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCCh
Confidence            579999875 57788999999999999999988888766555411       2233444556789999999999999999


Q ss_pred             CCCCCHHHHHcCccccC
Q 042950           73 CKRPTAAEALQHLFFKR   89 (216)
Q Consensus        73 ~kR~ta~eaL~HpfF~~   89 (216)
                      .+|+||+|+|+||||++
T Consensus       272 ~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         272 VQRISAEEALQHPYFSD  288 (292)
T ss_dssp             GGSCCHHHHTTSGGGSS
T ss_pred             hHCcCHHHHhcChhhcC
Confidence            99999999999999997

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.36  E-value=2.6e-13  Score=115.20  Aligned_cols=92  Identities=24%  Similarity=0.415  Sum_probs=68.9

Q ss_pred             CcccccCCCCCC-CCCHHHHHHHHHHhhCCCCHHHHHHHHhhc----------cccCCCccccC-----CCCCHHHHHHH
Q 042950            1 MAELLLFRPLFQ-GTDEAEQMYKICSVLGNPTMDSWADELRQA----------MLSGVNLSELM-----PSASKDAINLI   64 (216)
Q Consensus         1 L~ELltG~plF~-g~s~~dql~~I~~ilG~p~~~~~~~~~~~~----------~~~~~~l~~~~-----~~~s~~~~dLL   64 (216)
                      +|||++|+.+|. +.++.+++..|.+++|.+....|.......          ......+...+     ..++++++|||
T Consensus       220 l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli  299 (328)
T d3bqca1         220 LASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL  299 (328)
T ss_dssp             HHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHH
T ss_pred             hHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHH
Confidence            479999998875 567889999999999987665554433322          11112222222     23789999999


Q ss_pred             HhccccCCCCCCCHHHHHcCccccCCCC
Q 042950           65 ESLCSWDPCKRPTAAEALQHLFFKRCLY   92 (216)
Q Consensus        65 ~~mL~~dP~kR~ta~eaL~HpfF~~~~~   92 (216)
                      ++||++||.+|+||+|||+||||+++.|
T Consensus       300 ~~mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         300 DKLLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             HHHccCChhHCcCHHHHhcCcccCCCCC
Confidence            9999999999999999999999998654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2e-13  Score=115.31  Aligned_cols=89  Identities=27%  Similarity=0.397  Sum_probs=67.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCC--CCCHHHHHHHHhcccc
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMP--SASKDAINLIESLCSW   70 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~--~~s~~~~dLL~~mL~~   70 (216)
                      ||||++|++||.+.++.+++..|..++|.+..+.+.......        ......+...+.  ..+++++|||.+||++
T Consensus       212 l~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~  291 (318)
T d3blha1         212 MAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL  291 (318)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCS
T ss_pred             eeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcC
Confidence            589999999999999999999999999998876654322211        000011111111  1478899999999999


Q ss_pred             CCCCCCCHHHHHcCccccC
Q 042950           71 DPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        71 dP~kR~ta~eaL~HpfF~~   89 (216)
                      ||.+|+||.|+|+||||++
T Consensus       292 dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         292 DPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             STTTSCCHHHHHHSGGGSS
T ss_pred             ChhHCcCHHHHHcChhhcc
Confidence            9999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.7e-13  Score=118.08  Aligned_cols=89  Identities=27%  Similarity=0.444  Sum_probs=69.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhc--------cccCCCccccCC------------CCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQA--------MLSGVNLSELMP------------SASKDA   60 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~--------~~~~~~l~~~~~------------~~s~~~   60 (216)
                      ++||++|++||.+.++.+++.+|+..++.+..+.|.......        ......+...+.            ..++++
T Consensus       208 l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  287 (355)
T d2b1pa1         208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA  287 (355)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHH
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHH
Confidence            479999999999999999999999999999888775322211        111122221111            146789


Q ss_pred             HHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           61 INLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        61 ~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      +|||++||.+||++|+||+|||+||||+.
T Consensus       288 ~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         288 RDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            99999999999999999999999999997

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.23  E-value=3.1e-12  Score=110.32  Aligned_cols=74  Identities=24%  Similarity=0.208  Sum_probs=62.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+..|...-..+....                  ++.+++++.+||.+||.+||++|+|++|
T Consensus       215 lyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~------------------~~~~s~~~~~li~~~L~~dP~~R~t~~e  276 (350)
T d1koaa2         215 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA------------------FSGISEDGKDFIRKLLLADPNTRMTIHQ  276 (350)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGG------------------GGGCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc------------------ccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            5899999999999999999999987544332222                  2357899999999999999999999999


Q ss_pred             HHcCccccCCCC
Q 042950           81 ALQHLFFKRCLY   92 (216)
Q Consensus        81 aL~HpfF~~~~~   92 (216)
                      +|+||||+...+
T Consensus       277 il~hp~~~~~~~  288 (350)
T d1koaa2         277 ALEHPWLTPGNA  288 (350)
T ss_dssp             HHHSTTTSCTTC
T ss_pred             HhcCcccCCCCC
Confidence            999999997543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.7e-12  Score=107.53  Aligned_cols=73  Identities=26%  Similarity=0.216  Sum_probs=60.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+..|...-.......+                  +.+++++.+||.+||..||.+|+|++|
T Consensus       206 lyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dP~~R~s~~e  267 (293)
T d1jksa_         206 TYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF------------------SNTSALAKDFIRRLLVKDPKKRMTIQD  267 (293)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHH------------------TTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhc------------------CCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            58999999999999999999888765433333332                  367899999999999999999999999


Q ss_pred             HHcCccccCCC
Q 042950           81 ALQHLFFKRCL   91 (216)
Q Consensus        81 aL~HpfF~~~~   91 (216)
                      +|+||||+...
T Consensus       268 il~hp~~~~~~  278 (293)
T d1jksa_         268 SLQHPWIKPKD  278 (293)
T ss_dssp             HHHSTTTCC--
T ss_pred             HhcCcccCCCC
Confidence            99999998743

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.21  E-value=2.1e-11  Score=103.99  Aligned_cols=91  Identities=20%  Similarity=0.278  Sum_probs=63.4

Q ss_pred             CcccccCCCCCCCCC------HHHHHHHHHHhhCCCCHHHHHHHHhhc-------------cccCCCcc-------ccCC
Q 042950            1 MAELLLFRPLFQGTD------EAEQMYKICSVLGNPTMDSWADELRQA-------------MLSGVNLS-------ELMP   54 (216)
Q Consensus         1 L~ELltG~plF~g~s------~~dql~~I~~ilG~p~~~~~~~~~~~~-------------~~~~~~l~-------~~~~   54 (216)
                      ++||++|+.||.+.+      ..+.+..++.++|.++.+.+.......             ......+.       ....
T Consensus       219 l~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (362)
T d1q8ya_         219 IFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK  298 (362)
T ss_dssp             HHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCH
T ss_pred             HHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCc
Confidence            479999999997543      467889999999998887765422111             00000110       0111


Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccCCC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKRCL   91 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~~   91 (216)
                      ..+++++|||.+||++||.+||||+|||+||||+++.
T Consensus       299 ~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         299 DEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             ccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence            2467899999999999999999999999999999753

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.4e-12  Score=108.68  Aligned_cols=71  Identities=23%  Similarity=0.224  Sum_probs=62.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+..|++....++...|                  +.+++++.+||.+||+.||.+|+|+.|
T Consensus       193 ly~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dp~~R~s~~e  254 (321)
T d1tkia_         193 VYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF------------------KEISIEAMDFVDRLLVKERKSRMTASE  254 (321)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH------------------TTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhc------------------cCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            58999999999999999999999886555555554                  357999999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       255 il~hp~~~~  263 (321)
T d1tkia_         255 ALQHPWLKQ  263 (321)
T ss_dssp             HHHSHHHHS
T ss_pred             HhcCHhhcc
Confidence            999999986

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.20  E-value=2.6e-12  Score=110.84  Aligned_cols=72  Identities=28%  Similarity=0.269  Sum_probs=61.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+++..|......++..                  .++.+++++.+||.+||++||.+|+|+.|
T Consensus       218 lyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e  279 (352)
T d1koba_         218 GYVLLSGLSPFAGEDDLETLQNVKRCDWEFDED------------------AFSSVSPEAKDFIKNLLQKEPRKRLTVHD  279 (352)
T ss_dssp             HHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSS------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcc------------------cccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            589999999999999999999997754432222                  23468999999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||+..
T Consensus       280 il~Hp~~~~~  289 (352)
T d1koba_         280 ALEHPWLKGD  289 (352)
T ss_dssp             HHTSTTTSSC
T ss_pred             HhcCHhhCCC
Confidence            9999999873

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.18  E-value=5.3e-12  Score=105.37  Aligned_cols=72  Identities=28%  Similarity=0.205  Sum_probs=58.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.||.+.+..+.+..|+..--.+...                  ....+++++.+||.+||..||.+|+|++|
T Consensus       205 lyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------~~~~~s~~~~~li~~~L~~~p~~R~s~~e  266 (277)
T d1phka_         205 MYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP------------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEE  266 (277)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT------------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             hhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCc------------------ccccCCHHHHHHHHHHccCChhHCcCHHH
Confidence            589999999999999988888887632111111                  12358999999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||++.
T Consensus       267 il~h~~~~~~  276 (277)
T d1phka_         267 ALAHPFFQQY  276 (277)
T ss_dssp             HTTSGGGCTT
T ss_pred             HHcCHHHHHh
Confidence            9999999873

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=9.1e-12  Score=107.28  Aligned_cols=73  Identities=21%  Similarity=0.149  Sum_probs=60.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|++||.+.+....+..|......                      ....+++++.+||.+||..||.+|+    
T Consensus       228 lyemltG~~Pf~~~~~~~~~~~i~~~~~~----------------------~p~~~s~~~~~li~~~L~~dP~kR~~~~r  285 (350)
T d1rdqe_         228 IYEMAAGYPPFFADQPIQIYEKIVSGKVR----------------------FPSHFSSDLKDLLRNLLQVDLTKRFGNLK  285 (350)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC----------------------CCTTCCHHHHHHHHHHSCSCTTTCTTSST
T ss_pred             HHHHHhCCCCCCCcCHHHHHHHHhcCCCC----------------------CCccCCHHHHHHHHHHhhhCHHhcccccc
Confidence            58999999999999988888888763211                      1135789999999999999999996    


Q ss_pred             -CHHHHHcCccccCCCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~~   95 (216)
                       |++++|+||||+...|...
T Consensus       286 ~t~~ell~Hp~f~~~~~~~~  305 (350)
T d1rdqe_         286 NGVNDIKNHKWFATTDWIAI  305 (350)
T ss_dssp             TTTHHHHTSGGGTTCCHHHH
T ss_pred             ccHHHHHcCccccCCCHHHH
Confidence             8999999999998776543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.15  E-value=9.9e-12  Score=105.14  Aligned_cols=71  Identities=27%  Similarity=0.221  Sum_probs=58.5

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+..|++.-..+..                  ...+.+++++.+||.+||..||.+|+|+.|
T Consensus       199 lyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e  260 (307)
T d1a06a_         199 AYILLCGYPPFYDENDAKLFEQILKAEYEFDS------------------PYWDDISDSAKDFIRHLMEKDPEKRFTCEQ  260 (307)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCT------------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhccCCCCCC------------------ccccCCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            58999999999999988888888663222111                  123468999999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       261 il~hp~~~~  269 (307)
T d1a06a_         261 ALQHPWIAG  269 (307)
T ss_dssp             HHHSTTTTS
T ss_pred             HhcCHhhCC
Confidence            999999986

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.4e-11  Score=103.67  Aligned_cols=70  Identities=24%  Similarity=0.325  Sum_probs=57.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+++..++.. +.+....                  ...+++++.+||.+||..||.+|+|+.|
T Consensus       206 lyemltG~~Pf~~~~~~~~~~~~~~~-~~~~~~~------------------~~~~s~~~~~li~~~L~~dP~~R~s~~e  266 (293)
T d1yhwa1         206 AIEMIEGEPPYLNENPLRALYLIATN-GTPELQN------------------PEKLSAIFRDFLNRCLDMDVEKRGSAKE  266 (293)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHH-CSCCCSS------------------GGGSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHhC-CCCCCCC------------------cccCCHHHHHHHHHHccCChhHCcCHHH
Confidence            58999999999999998888887653 2221111                  1247899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       267 il~Hp~~~~  275 (293)
T d1yhwa1         267 LLQHQFLKI  275 (293)
T ss_dssp             HTTCGGGGG
T ss_pred             HhcCHhhCC
Confidence            999999985

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.1e-11  Score=102.62  Aligned_cols=67  Identities=25%  Similarity=0.355  Sum_probs=56.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+..|.+.-..                      +-..+++++.+||.+||..||.+|+|+.|
T Consensus       194 lyell~G~~Pf~~~~~~~~~~~i~~~~~~----------------------~p~~~s~~~~~li~~~L~~dp~~R~t~~e  251 (263)
T d2j4za1         194 CYEFLVGKPPFEANTYQETYKRISRVEFT----------------------FPDFVTEGARDLISRLLKHNPSQRPMLRE  251 (263)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTTCCC----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------------CCccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            58999999999999988888877652111                      01247899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||++
T Consensus       252 il~hp~~~~  260 (263)
T d2j4za1         252 VLEHPWITA  260 (263)
T ss_dssp             HHTCHHHHH
T ss_pred             HHcCcCcCC
Confidence            999999975

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=2.3e-11  Score=103.25  Aligned_cols=73  Identities=19%  Similarity=0.272  Sum_probs=60.8

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+.||.+.+..+.+.+|+.  +...                    +-+.+++++.+||.+||..||.+|+    
T Consensus       191 lyemltG~~Pf~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~~li~~~L~~dp~~R~~~~r  248 (316)
T d1fota_         191 IYEMLAGYTPFYDSNTMKTYEKILN--AELR--------------------FPPFFNEDVKDLLSRLITRDLSQRLGNLQ  248 (316)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHH--CCCC--------------------CCTTSCHHHHHHHHHHTCSCTTTCTTSST
T ss_pred             HHHHHhCCCCCCCcCHHHHHHHHHc--CCCC--------------------CCCCCCHHHHHHHHHHhhhCHHhccccch
Confidence            5899999999999999888888876  2211                    1135789999999999999999997    


Q ss_pred             -CHHHHHcCccccCCCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYAPP   95 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~~   95 (216)
                       |++++|+||||+++.|...
T Consensus       249 ~t~~~il~Hp~f~~i~~~~l  268 (316)
T d1fota_         249 NGTEDVKNHPWFKEVVWEKL  268 (316)
T ss_dssp             TTTHHHHTSGGGSSCCHHHH
T ss_pred             hhHHHHHcCcccccCCHHHH
Confidence             8999999999999766543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.7e-11  Score=102.86  Aligned_cols=73  Identities=23%  Similarity=0.214  Sum_probs=60.2

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+.+|++  +.+.                    +-..+++++.|||.+||+.||.+|+|++|
T Consensus       200 lyell~g~~Pf~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~~li~~~L~~dP~~R~t~~e  257 (288)
T d1uu3a_         200 IYQLVAGLPPFRAGNEYLIFQKIIK--LEYD--------------------FPEKFFPKARDLVEKLLVLDATKRLGCEE  257 (288)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHT--TCCC--------------------CCTTCCHHHHHHHHTTSCSSGGGSTTSGG
T ss_pred             HHHHhhCCCCCCCcCHHHHHHHHHc--CCCC--------------------CCccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            5899999999999998888888865  2211                    11257899999999999999999999987


Q ss_pred             ------HHcCccccCCCCCCC
Q 042950           81 ------ALQHLFFKRCLYAPP   95 (216)
Q Consensus        81 ------aL~HpfF~~~~~~~~   95 (216)
                            +++||||+++.|...
T Consensus       258 ~~~~~~i~~Hpff~~i~w~~l  278 (288)
T d1uu3a_         258 MEGYGPLKAHPFFESVTWENL  278 (288)
T ss_dssp             GTCHHHHHTSGGGTTCCCTTG
T ss_pred             HcCCHHHHcCCccCCCCHHHh
Confidence                  689999999877654

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2e-11  Score=102.31  Aligned_cols=70  Identities=19%  Similarity=0.214  Sum_probs=57.0

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+.+|..  +.+..                + .....+++++.+||.+||..||.+|+|+.|
T Consensus       205 lyemltg~~Pf~~~~~~~~~~~i~~--~~~~~----------------~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~e  265 (288)
T d2jfla1         205 LIEMAEIEPPHHELNPMRVLLKIAK--SEPPT----------------L-AQPSRWSSNFKDFLKKCLEKNVDARWTTSQ  265 (288)
T ss_dssp             HHHHHHSSCTTTTSCGGGHHHHHHH--SCCCC----------------C-SSGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHc--CCCCC----------------C-CccccCCHHHHHHHHHHccCChhHCcCHHH
Confidence            5899999999999988888888866  22110                0 011347899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       266 ll~hp~~~~  274 (288)
T d2jfla1         266 LLQHPFVTV  274 (288)
T ss_dssp             HTTSGGGCC
T ss_pred             HhcCcccCC
Confidence            999999975

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.8e-11  Score=100.66  Aligned_cols=70  Identities=10%  Similarity=0.129  Sum_probs=53.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+++|.+.++..+...+.......                   ......+++++.+||.+||..||.+|+|++|
T Consensus       196 lyeml~G~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e  256 (271)
T d1nvra_         196 LTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------------------LNPWKKIDSAPLALLHKILVENPSARITIPD  256 (271)
T ss_dssp             HHHHHHSSCSCSSSSTTSHHHHHHHTTCTT-------------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhcCCCC-------------------CCccccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            589999999998876655554444322111                   0112357899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||+.
T Consensus       257 il~hpwf~~  265 (271)
T d1nvra_         257 IKKDRWYNK  265 (271)
T ss_dssp             HTTCTTTTC
T ss_pred             HhcCHhhCc
Confidence            999999986

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=103.32  Aligned_cols=72  Identities=25%  Similarity=0.267  Sum_probs=58.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|+++|.+.+..+.+..|..  +.+.                    +...+++++.|||.+||+.||.+|++   
T Consensus       195 lyeml~G~~pf~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~dli~~~L~~dP~~R~~~~~  252 (337)
T d1o6la_         195 MYEMMCGRLPFYNQDHERLFELILM--EEIR--------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGP  252 (337)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--CCCC--------------------CCTTSCHHHHHHHHHHTCSSTTTSTTCST
T ss_pred             HHHHHHCCCCCCCcCHHHHHHHHhc--CCCC--------------------CCccCCHHHHHHHHhhccCCchhhccccc
Confidence            5899999999999998887777765  3221                    11357999999999999999999994   


Q ss_pred             --HHHHHcCccccCCCCCC
Q 042950           78 --AAEALQHLFFKRCLYAP   94 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~   94 (216)
                        ++|+|+||||+++.|..
T Consensus       253 ~~~~eil~Hp~f~~i~~~~  271 (337)
T d1o6la_         253 SDAKEVMEHRFFLSINWQD  271 (337)
T ss_dssp             TTHHHHHTSGGGTTCCHHH
T ss_pred             ccHHHHHcCcccccCCHHH
Confidence              99999999999866543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=7e-12  Score=106.69  Aligned_cols=71  Identities=28%  Similarity=0.369  Sum_probs=58.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH-
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA-   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~-   79 (216)
                      ||||++|+.||.|.+..+++..|..  +.+.                    +...+++++.+||.+||..||.+|+|+. 
T Consensus       193 lyemltG~~PF~~~~~~~~~~~i~~--~~~~--------------------~p~~~s~~~~dli~~~L~~dP~~R~s~~~  250 (320)
T d1xjda_         193 LYEMLIGQSPFHGQDEEELFHSIRM--DNPF--------------------YPRWLEKEAKDLLVKLFVREPEKRLGVRG  250 (320)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHH--CCCC--------------------CCTTSCHHHHHHHHHHSCSSGGGSBTTBS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHc--CCCC--------------------CCccCCHHHHHHHHHhcccCCCCCcCHHH
Confidence            5899999999999998888888754  4332                    1124789999999999999999999995 


Q ss_pred             HHHcCccccCCCCC
Q 042950           80 EALQHLFFKRCLYA   93 (216)
Q Consensus        80 eaL~HpfF~~~~~~   93 (216)
                      ++++||||+++.|.
T Consensus       251 ~l~~hpff~~~~~~  264 (320)
T d1xjda_         251 DIRQHPLFREINWE  264 (320)
T ss_dssp             CGGGSGGGTTCCHH
T ss_pred             HHHhCchhccCCHH
Confidence            89999999986553

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.9e-11  Score=99.02  Aligned_cols=69  Identities=20%  Similarity=0.255  Sum_probs=52.6

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.||.+.+...++.+.+.- |..+...                  -...++++.+||.+||..||++|+|++|
T Consensus       202 lyel~~g~~Pf~~~~~~~~~~~~i~~-~~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~R~s~~e  262 (270)
T d1t4ha_         202 MLEMATSEYPYSECQNAAQIYRRVTS-GVKPASF------------------DKVAIPEVKEIIEGCIRQNKDERYSIKD  262 (270)
T ss_dssp             HHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCGGG------------------GGCCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCcccHHHHHHHHHc-CCCCccc------------------CccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            58999999999887666555444321 2222111                  1246889999999999999999999999


Q ss_pred             HHcCcccc
Q 042950           81 ALQHLFFK   88 (216)
Q Consensus        81 aL~HpfF~   88 (216)
                      +|+||||+
T Consensus       263 ll~Hp~fk  270 (270)
T d1t4ha_         263 LLNHAFFQ  270 (270)
T ss_dssp             HHTSGGGC
T ss_pred             HhCCcccC
Confidence            99999995

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=3.9e-11  Score=101.79  Aligned_cols=90  Identities=16%  Similarity=0.176  Sum_probs=51.2

Q ss_pred             CcccccCCCCCCCCC-HHHHHHHHHHhhCCCCHHHHHHHHh----h-------c---------cccCCCccccC-CCCCH
Q 042950            1 MAELLLFRPLFQGTD-EAEQMYKICSVLGNPTMDSWADELR----Q-------A---------MLSGVNLSELM-PSASK   58 (216)
Q Consensus         1 L~ELltG~plF~g~s-~~dql~~I~~ilG~p~~~~~~~~~~----~-------~---------~~~~~~l~~~~-~~~s~   58 (216)
                      ||||++|+.||.+.+ ...++..+..+.|.+..........    .       +         .........+. ...+.
T Consensus       193 l~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  272 (322)
T d1s9ja_         193 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL  272 (322)
T ss_dssp             HHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCH
Confidence            589999999998755 4455555556666543221110000    0       0         00000001111 12588


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHHcCccccCC
Q 042950           59 DAINLIESLCSWDPCKRPTAAEALQHLFFKRC   90 (216)
Q Consensus        59 ~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~~   90 (216)
                      +++|||.+||++||.+|+||+|+|+||||++.
T Consensus       273 ~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         273 EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence            99999999999999999999999999999874

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=5.6e-12  Score=107.30  Aligned_cols=79  Identities=28%  Similarity=0.252  Sum_probs=58.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC----
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP----   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~----   76 (216)
                      ||||++|+.||.+.+..+....|........                  ..+....++++.+||.+||.+||.+|+    
T Consensus       222 LyelltG~~PF~~~~~~~~~~~i~~~~~~~~------------------~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~  283 (322)
T d1vzoa_         222 MYELLTGASPFTVDGEKNSQAEISRRILKSE------------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGP  283 (322)
T ss_dssp             HHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC------------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSST
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcccCC------------------CCCcccCCHHHHHHHHHHcccCHHHcCCCCc
Confidence            5899999999998776665555544221100                  011235799999999999999999999    


Q ss_pred             -CHHHHHcCccccCCCCCCCCC
Q 042950           77 -TAAEALQHLFFKRCLYAPPHI   97 (216)
Q Consensus        77 -ta~eaL~HpfF~~~~~~~~~~   97 (216)
                       ||+|+|+||||+.+.+.....
T Consensus       284 ~t~~eil~Hpff~~i~~~~l~~  305 (322)
T d1vzoa_         284 RDADEIKEHLFFQKINWDDLAA  305 (322)
T ss_dssp             TTHHHHHTSGGGTTCCHHHHHT
T ss_pred             ccHHHHHcCHhhcCCCHHHHHh
Confidence             589999999999876544333

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.00  E-value=8.8e-11  Score=101.48  Aligned_cols=75  Identities=23%  Similarity=0.173  Sum_probs=55.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC---
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT---   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t---   77 (216)
                      ||||++|++||.+.+..+....+..++..+.                   .+...+++++.+||.+||..||.+|+|   
T Consensus       196 lyemltG~~Pf~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~  256 (364)
T d1omwa3         196 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-------------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLG  256 (364)
T ss_dssp             HHHHHHSSCSSCSSCSSCHHHHHHHSSSCCC-------------------CCCSSSCHHHHHHHHHHTCSSTTTSTTTSS
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhcccCCC-------------------CCCCCCCHHHHHHHHHHcccCHHHhCCCcc
Confidence            5899999999988654443332222222111                   112357999999999999999999999   


Q ss_pred             --HHHHHcCccccCCCCCC
Q 042950           78 --AAEALQHLFFKRCLYAP   94 (216)
Q Consensus        78 --a~eaL~HpfF~~~~~~~   94 (216)
                        |+|+|+||||+++.|..
T Consensus       257 ~~a~eil~Hp~f~~i~~~~  275 (364)
T d1omwa3         257 RGAQEVKESPFFRSLDWQM  275 (364)
T ss_dssp             STHHHHHTSGGGTTCCHHH
T ss_pred             cCHHHHHcCccccCCCHHH
Confidence              89999999999877643

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.7e-10  Score=95.63  Aligned_cols=66  Identities=21%  Similarity=0.274  Sum_probs=54.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+.+|.+  |..                   ..+...+++++.+||.+||..||.+|||+.|
T Consensus       204 lyel~tg~~Pf~~~~~~~~~~~i~~--~~~-------------------~~~~~~~s~~l~~li~~~L~~dp~~Rps~~e  262 (269)
T d2java1         204 LYELCALMPPFTAFSQKELAGKIRE--GKF-------------------RRIPYRYSDELNEIITRMLNLKDYHRPSVEE  262 (269)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHH--TCC-------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHc--CCC-------------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHH
Confidence            5899999999999998888887765  221                   1112357899999999999999999999999


Q ss_pred             HHcCccc
Q 042950           81 ALQHLFF   87 (216)
Q Consensus        81 aL~HpfF   87 (216)
                      +|+|||.
T Consensus       263 ll~hp~i  269 (269)
T d2java1         263 ILENPLI  269 (269)
T ss_dssp             HHTSTTC
T ss_pred             HHhCCcC
Confidence            9999995

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.96  E-value=1.9e-10  Score=97.22  Aligned_cols=69  Identities=26%  Similarity=0.289  Sum_probs=56.7

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+..|+..-- +.                 +  .-...++++.+||.+||.+||.+|||++|
T Consensus       204 lyel~~g~~Pf~~~~~~~~~~~i~~~~~-~~-----------------~--~~~~~s~~~~~li~~~L~~dP~~Rpt~~e  263 (309)
T d1u5ra_         204 CIELAERKPPLFNMNAMSALYHIAQNES-PA-----------------L--QSGHWSEYFRNFVDSCLQKIPQDRPTSEV  263 (309)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHSCC-CC-----------------C--SCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhCCC-CC-----------------C--CCCCCCHHHHHHHHHHCcCChhHCcCHHH
Confidence            5899999999999998888888865211 10                 0  01247899999999999999999999999


Q ss_pred             HHcCccccC
Q 042950           81 ALQHLFFKR   89 (216)
Q Consensus        81 aL~HpfF~~   89 (216)
                      +|+||||..
T Consensus       264 ll~Hp~~~~  272 (309)
T d1u5ra_         264 LLKHRFVLR  272 (309)
T ss_dssp             HTTCHHHHS
T ss_pred             HHhCHHhcC
Confidence            999999986

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=1.5e-10  Score=98.80  Aligned_cols=71  Identities=21%  Similarity=0.227  Sum_probs=49.9

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCC----CCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCC
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGN----PTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRP   76 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~----p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~   76 (216)
                      ||||++|++||.+.+....+..+....-.    .+...|                  ..+++++.+||.+||++||.+|+
T Consensus       203 ly~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------------~~~s~~~~~li~~~L~~dP~~R~  264 (335)
T d2ozaa1         203 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW------------------SEVSEEVKMLIRNLLKTEPTQRM  264 (335)
T ss_dssp             HHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHH------------------HHSCHHHHHHHHHHSCSSTTTSC
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCccc------------------ccCCHHHHHHHHHHccCChhHCc
Confidence            58999999999987766555554432211    011111                  24789999999999999999999


Q ss_pred             CHHHHHcCccccC
Q 042950           77 TAAEALQHLFFKR   89 (216)
Q Consensus        77 ta~eaL~HpfF~~   89 (216)
                      |+.|+|+||||.+
T Consensus       265 s~~eil~hp~~~~  277 (335)
T d2ozaa1         265 TITEFMNHPWIMQ  277 (335)
T ss_dssp             CHHHHHHSHHHHT
T ss_pred             CHHHHHcCHHhhC
Confidence            9999999999976

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=8e-11  Score=97.50  Aligned_cols=62  Identities=19%  Similarity=0.281  Sum_probs=48.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.||.+.+      .|+.  +..                 .   +-..+++++.+||.+||.+||.+|+|++|
T Consensus       200 lyell~g~~Pf~~~~------~i~~--~~~-----------------~---~~~~~s~~~~~li~~~L~~dp~~R~s~~e  251 (273)
T d1xwsa_         200 LYDMVCGDIPFEHDE------EIIR--GQV-----------------F---FRQRVSSECQHLIRWCLALRPSDRPTFEE  251 (273)
T ss_dssp             HHHHHHSSCSCCSHH------HHHH--CCC-----------------C---CSSCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ehhHhhCCCCCCCch------HHhh--ccc-----------------C---CCCCCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            589999999997642      2222  111                 0   11357899999999999999999999999


Q ss_pred             HHcCccccCC
Q 042950           81 ALQHLFFKRC   90 (216)
Q Consensus        81 aL~HpfF~~~   90 (216)
                      +|+||||++.
T Consensus       252 il~hp~~~~~  261 (273)
T d1xwsa_         252 IQNHPWMQDV  261 (273)
T ss_dssp             HHTSGGGSSC
T ss_pred             HhcCHhhCCC
Confidence            9999999873

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.52  E-value=8.7e-09  Score=84.82  Aligned_cols=70  Identities=17%  Similarity=0.163  Sum_probs=54.1

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|++||.+.+..+.+.+++.--..+..                  ...+.+++++.+||.+||..||.+|++..+
T Consensus       204 lyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~s~~l~~li~~~L~~dp~~R~~sa~  265 (277)
T d1o6ya_         204 LYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS------------------ARHEGLSADLDAVVLKALAKNPENRYQTAA  265 (277)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGG------------------GTSSSCCHHHHHHHHHHTCSSGGGSCSSHH
T ss_pred             HHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCc------------------hhccCCCHHHHHHHHHHccCCHhHCHhHHH
Confidence            58999999999999998888888763222211                  123468999999999999999999996555


Q ss_pred             HHcCcccc
Q 042950           81 ALQHLFFK   88 (216)
Q Consensus        81 aL~HpfF~   88 (216)
                      .|.|+|.+
T Consensus       266 ~l~~~l~r  273 (277)
T d1o6ya_         266 EMRADLVR  273 (277)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            66677764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=7.6e-08  Score=81.07  Aligned_cols=64  Identities=16%  Similarity=0.140  Sum_probs=50.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |++||.+.+....+.+++.---.+.                    .-..+++++.+||.+||..||++|||++
T Consensus       256 l~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~--------------------~p~~~~~~l~~li~~cl~~dP~~RPt~~  315 (325)
T d1rjba_         256 LWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD--------------------QPFYATEEIYIIMQSCWAFDSRKRPSFP  315 (325)
T ss_dssp             HHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCC--------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC--------------------CCCcCCHHHHHHHHHHcCCChhHCcCHH
Confidence            589997 8999999877777777765211111                    1124789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |+++|
T Consensus       316 ei~~~  320 (325)
T d1rjba_         316 NLTSF  320 (325)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99976

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.4e-07  Score=77.69  Aligned_cols=67  Identities=16%  Similarity=0.273  Sum_probs=50.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |++||.+.+..+.+..|.+  |...                   ..-..+++++.+||.+||..||++|||++
T Consensus       200 l~ellt~g~~Pf~~~~~~~~~~~i~~--~~~~-------------------~~p~~~~~~~~~li~~cl~~dp~~RPs~~  258 (277)
T d1xbba_         200 MWEAFSYGQKPYRGMKGSEVTAMLEK--GERM-------------------GCPAGCPREMYDLMNLCWTYDVENRPGFA  258 (277)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHT--TCCC-------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             hhHHhhCCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCCcccCHHHHHHHHHHcCCCHhHCcCHH
Confidence            589997 8999999887766666543  2210                   01134789999999999999999999999


Q ss_pred             HH---HcCcccc
Q 042950           80 EA---LQHLFFK   88 (216)
Q Consensus        80 ea---L~HpfF~   88 (216)
                      ++   |+|+|++
T Consensus       259 ~i~~~L~~~~~~  270 (277)
T d1xbba_         259 AVELRLRNYYYD  270 (277)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHhhCHHhh
Confidence            87   5676664

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.4e-07  Score=76.39  Aligned_cols=68  Identities=15%  Similarity=0.123  Sum_probs=52.4

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHHH
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAAE   80 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~e   80 (216)
                      ||||++|+.||.+.+..+++..++...-.+                ..+..+...+++++.+||.+||..||.+|||+.|
T Consensus       199 l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~----------------p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~  262 (276)
T d1uwha_         199 LYELMTGQLPYSNINNRDQIIFMVGRGYLS----------------PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQ  262 (276)
T ss_dssp             HHHHHHSSCTTTTCCCHHHHHHHHHHTSCC----------------CCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCCChHHHHHHHHhcCCCC----------------CcchhccccchHHHHHHHHHHcCCCHhHCcCHHH
Confidence            589999999999988777776665432111                1122334467899999999999999999999999


Q ss_pred             HHcC
Q 042950           81 ALQH   84 (216)
Q Consensus        81 aL~H   84 (216)
                      +++|
T Consensus       263 il~~  266 (276)
T d1uwha_         263 ILAS  266 (276)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9987

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.9e-07  Score=76.26  Aligned_cols=63  Identities=19%  Similarity=0.072  Sum_probs=50.3

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++ |+.+|.+.+..+.+..|.+....+.                     -...++++.+||.+||..||.+|||+.
T Consensus       191 l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~---------------------p~~~~~~l~~li~~cl~~dP~~RPt~~  249 (258)
T d1k2pa_         191 MWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---------------------PHLASEKVYTIMYSCWHEKADERPTFK  249 (258)
T ss_dssp             HHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC---------------------CTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             hHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCC---------------------cccccHHHHHHHHHHccCCHhHCcCHH
Confidence            479998 8999999998887777765221110                     124678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      ++|+|
T Consensus       250 eil~~  254 (258)
T d1k2pa_         250 ILLSN  254 (258)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2.3e-07  Score=75.92  Aligned_cols=63  Identities=24%  Similarity=0.395  Sum_probs=50.5

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+.+..|.+  |...                   .+.+.+++++.+||.+||..||.+|||+.
T Consensus       199 l~e~lt~g~~P~~~~~~~~~~~~i~~--~~~~-------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~  257 (273)
T d1mp8a_         199 MWEILMHGVKPFQGVKNNDVIGRIEN--GERL-------------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFT  257 (273)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHT--TCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCCCCCCHHHHHHHHHHcCCCHhHCcCHH
Confidence            589987 8999999888777777754  3210                   12246789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |+++|
T Consensus       258 ei~~~  262 (273)
T d1mp8a_         258 ELKAQ  262 (273)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99876

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=2e-07  Score=76.44  Aligned_cols=68  Identities=16%  Similarity=0.151  Sum_probs=52.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..|....-.+                     .-..+++++.+||.+||..||++|||+.
T Consensus       200 l~ellt~~~~~~~~~~~~~~~~~i~~~~~~~---------------------~p~~~~~~l~~li~~cl~~~P~~Rpt~~  258 (272)
T d1qpca_         200 LTEIVTHGRIPYPGMTNPEVIQNLERGYRMV---------------------RPDNCPEELYQLMRLCWKERPEDRPTFD  258 (272)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC---------------------CcccChHHHHHHHHHHcCCCHhHCcCHH
Confidence            589998 567777777777776664421110                     0124788999999999999999999999


Q ss_pred             HHHc--CccccC
Q 042950           80 EALQ--HLFFKR   89 (216)
Q Consensus        80 eaL~--HpfF~~   89 (216)
                      ++++  |+||++
T Consensus       259 ei~~~L~~~fts  270 (272)
T d1qpca_         259 YLRSVLEDFFTA  270 (272)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHhhhhhhc
Confidence            9998  899975

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=5.5e-07  Score=74.52  Aligned_cols=68  Identities=19%  Similarity=0.214  Sum_probs=53.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..|......+                     ..+.+++++.+||.+||..||++|||+.
T Consensus       204 l~el~t~~~p~~~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~l~~li~~cl~~dP~~Rps~~  262 (285)
T d1fmka3         204 LTELTTKGRVPYPGMVNREVLDQVERGYRMP---------------------CPPECPESLHDLMCQCWRKEPEERPTFE  262 (285)
T ss_dssp             HHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC---------------------CCcccCHHHHHHHHHHcccCHhHCcCHH
Confidence            579998 567777788777777775422211                     1235789999999999999999999999


Q ss_pred             HHHc--CccccC
Q 042950           80 EALQ--HLFFKR   89 (216)
Q Consensus        80 eaL~--HpfF~~   89 (216)
                      ++++  |+||.+
T Consensus       263 ~i~~~L~~~~~~  274 (285)
T d1fmka3         263 YLQAFLEDYFTS  274 (285)
T ss_dssp             HHHHHHHTTTSC
T ss_pred             HHHHHHhhhhcC
Confidence            9987  888876

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=3.9e-07  Score=75.42  Aligned_cols=68  Identities=18%  Similarity=0.191  Sum_probs=52.4

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |++||.+.+..+.+..|.+  |...                   ...+.+++++.+||.+||..||++|||+.
T Consensus       202 l~E~lt~G~~Pf~~~~~~~~~~~i~~--~~~~-------------------~~p~~~~~~l~~li~~cl~~~p~~RPs~~  260 (285)
T d1u59a_         202 MWEALSYGQKPYKKMKGPEVMAFIEQ--GKRM-------------------ECPPECPPELYALMSDCWIYKWEDRPDFL  260 (285)
T ss_dssp             HHHHHTTSCCTTTTCCTHHHHHHHHT--TCCC-------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCCCcCCHHHHHHHHHHcCCCHhHCcCHH
Confidence            589998 9999999887777666644  3210                   11235789999999999999999999987


Q ss_pred             HH---HcCccccC
Q 042950           80 EA---LQHLFFKR   89 (216)
Q Consensus        80 ea---L~HpfF~~   89 (216)
                      ++   |+|.|++-
T Consensus       261 ~i~~~L~~~~~~~  273 (285)
T d1u59a_         261 TVEQRMRACYYSL  273 (285)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            76   77888863

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=7.4e-07  Score=73.13  Aligned_cols=62  Identities=16%  Similarity=0.132  Sum_probs=49.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |++||.+.+..+.+.+|.+---.+                    .....+++++.+||.+||..||.+|||+.
T Consensus       204 l~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~--------------------~~~~~~~~~l~~li~~cl~~dp~~RPt~~  263 (273)
T d1u46a_         204 LWEMFTYGQEPWIGLNGSQILHKIDKEGERL--------------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFV  263 (273)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC--------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCcCHHHHHHHHHhCCCCC--------------------CCcccccHHHHHHHHHHcCCChhHCcCHH
Confidence            589998 899999999988888876521111                    11235789999999999999999999999


Q ss_pred             HHH
Q 042950           80 EAL   82 (216)
Q Consensus        80 eaL   82 (216)
                      +++
T Consensus       264 ei~  266 (273)
T d1u46a_         264 ALR  266 (273)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=1.6e-06  Score=72.01  Aligned_cols=63  Identities=13%  Similarity=0.062  Sum_probs=49.7

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..|..-.-.+                     ....++.++.+||.+||..||.+|||+.
T Consensus       223 l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~l~~li~~cl~~~P~~RPs~~  281 (299)
T d1jpaa_         223 MWEVMSYGERPYWDMTNQDVINAIEQDYRLP---------------------PPMDCPSALHQLMLDCWQKDRNHRPKFG  281 (299)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------------------CCccchHHHHHHHHHHcCCCHhHCcCHH
Confidence            589998 899999998888777775421111                     1124788999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |++++
T Consensus       282 ei~~~  286 (299)
T d1jpaa_         282 QIVNT  286 (299)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=7.9e-07  Score=73.41  Aligned_cols=64  Identities=16%  Similarity=0.264  Sum_probs=47.6

Q ss_pred             CcccccC-CCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLF-RPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG-~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++| .++|.+.+..+.+..++.- |...                   .....+++++.+||.+||..||.+|||+.
T Consensus       226 l~ellt~~~~p~~~~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~  285 (299)
T d1ywna1         226 LWEIFSLGASPYPGVKIDEEFCRRLKE-GTRM-------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFS  285 (299)
T ss_dssp             HHHHHTTSCCSSTTCCCSHHHHHHHHH-TCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhc-CCCC-------------------CCCccCCHHHHHHHHHHcCCChhHCcCHH
Confidence            4799986 5789887666666655542 2110                   11234789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |+++|
T Consensus       286 eil~~  290 (299)
T d1ywna1         286 ELVEH  290 (299)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.4e-06  Score=70.86  Aligned_cols=63  Identities=16%  Similarity=0.141  Sum_probs=48.2

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..|....-.+                     .-...++++.+||.+||..||.+|||++
T Consensus       192 l~el~t~~~~~~~~~~~~~~~~~i~~~~~~~---------------------~p~~~~~~l~~li~~cl~~~p~~Rps~~  250 (263)
T d1sm2a_         192 MWEVFSEGKIPYENRSNSEVVEDISTGFRLY---------------------KPRLASTHVYQIMNHCWKERPEDRPAFS  250 (263)
T ss_dssp             HHHHHTTSCCTTCSCCHHHHHHHHHHTCCCC---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHhcCCCC---------------------CccccCHHHHHHHHHHccCCHhHCcCHH
Confidence            579998 678888888777777765521110                     0123678999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |+|+|
T Consensus       251 ~il~~  255 (263)
T d1sm2a_         251 RLLRQ  255 (263)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.2e-06  Score=72.97  Aligned_cols=63  Identities=21%  Similarity=0.229  Sum_probs=48.6

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+.+.++++---.+.                    .-...++++.+||.+||.+||.+|||+.
T Consensus       237 l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~--------------------~~~~~~~~l~~Li~~cl~~dP~~RPs~~  296 (311)
T d1t46a_         237 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRML--------------------SPEHAPAEMYDIMKTCWDADPLKRPTFK  296 (311)
T ss_dssp             HHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC--------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC--------------------CcccccHHHHHHHHHHcCCChhHCcCHH
Confidence            579998 7888988887777777765311110                    1124689999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      ++|+
T Consensus       297 ~il~  300 (311)
T d1t46a_         297 QIVQ  300 (311)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2e-06  Score=71.57  Aligned_cols=68  Identities=15%  Similarity=0.246  Sum_probs=52.5

Q ss_pred             CcccccC-CCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLF-RPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG-~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      |+||++| +++|.+.+..+.+..|.+  |..                   ......+++++.+||.+||..||.+|||+.
T Consensus       225 l~El~t~~~~p~~~~~~~~~~~~i~~--~~~-------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~  283 (308)
T d1p4oa_         225 LWEIATLAEQPYQGLSNEQVLRFVME--GGL-------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFL  283 (308)
T ss_dssp             HHHHHHTSCCTTTTSCHHHHHHHHHT--TCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHh--CCC-------------------CCCcccchHHHHHHHHHHcCCChhHCcCHH
Confidence            5799998 588988888887777754  210                   011235788999999999999999999999


Q ss_pred             HHHc------CccccC
Q 042950           80 EALQ------HLFFKR   89 (216)
Q Consensus        80 eaL~------HpfF~~   89 (216)
                      ++++      +|+|++
T Consensus       284 ~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         284 EIISSIKEEMEPGFRE  299 (308)
T ss_dssp             HHHHHHGGGSCTTHHH
T ss_pred             HHHHHHHHhcCCCCcC
Confidence            9998      666654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=2.9e-06  Score=70.13  Aligned_cols=62  Identities=13%  Similarity=0.196  Sum_probs=45.8

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..|..  |...                   ..-..+++++.+||.+||.+||.+|||+.
T Consensus       227 l~ell~~g~~p~~~~~~~~~~~~i~~--~~~~-------------------~~p~~~~~~l~~li~~cl~~dP~~Rps~~  285 (299)
T d1fgka_         227 LWEIFTLGGSPYPGVPVEELFKLLKE--GHRM-------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFK  285 (299)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHT--TCCC-------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCCccchHHHHHHHHHHccCCHhHCcCHH
Confidence            589997 7899988776554444432  2110                   01134789999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      |+|+
T Consensus       286 eil~  289 (299)
T d1fgka_         286 QLVE  289 (299)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9986

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=1.5e-06  Score=71.01  Aligned_cols=63  Identities=10%  Similarity=0.110  Sum_probs=48.0

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |+++|.+.+..+.+..|.+  |.                   ...+....++++.+||.+||..||.+|||+.
T Consensus       190 l~el~t~~~~p~~~~~~~~~~~~i~~--~~-------------------~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~  248 (262)
T d1byga_         190 LWEIYSFGRVPYPRIPLKDVVPRVEK--GY-------------------KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFL  248 (262)
T ss_dssp             HHHHHTTSCCSCTTSCGGGHHHHHTT--TC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHc--CC-------------------CCCCCccCCHHHHHHHHHHcccCHhHCcCHH
Confidence            589998 7899988777666666533  21                   0112335789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      +++++
T Consensus       249 ~l~~~  253 (262)
T d1byga_         249 QLREQ  253 (262)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=2.5e-06  Score=70.88  Aligned_cols=63  Identities=21%  Similarity=0.250  Sum_probs=48.1

Q ss_pred             CcccccCC-CCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFR-PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~-plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      +|||++|. ++|.+.+..+.+..|.+  |...                   .....+++++.+||.+||..||++|||+.
T Consensus       216 l~ell~~~~~p~~~~~~~~~~~~i~~--~~~~-------------------~~~~~~~~~~~~li~~cl~~dP~~RPs~~  274 (309)
T d1fvra_         216 LWEIVSLGGTPYCGMTCAELYEKLPQ--GYRL-------------------EKPLNCDDEVYDLMRQCWREKPYERPSFA  274 (309)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHGGG--TCCC-------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHh--cCCC-------------------CCCccCCHHHHHHHHHHcCCChhHCcCHH
Confidence            57999965 67888887776666643  2110                   11235789999999999999999999999


Q ss_pred             HHHcC
Q 042950           80 EALQH   84 (216)
Q Consensus        80 eaL~H   84 (216)
                      |+|+|
T Consensus       275 eil~~  279 (309)
T d1fvra_         275 QILVS  279 (309)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=2.2e-06  Score=71.54  Aligned_cols=64  Identities=17%  Similarity=0.162  Sum_probs=47.7

Q ss_pred             Cccccc-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLL-FRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELlt-G~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++ |.++|.+.+..+....|.+  |...                   ..-+.+++++.+||.+||..||.+|||+.
T Consensus       203 l~el~t~g~~p~~~~~~~~~~~~i~~--~~~~-------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~  261 (317)
T d1xkka_         203 VWELMTFGSKPYDGIPASEISSILEK--GERL-------------------PQPPICTIDVYMIMVKCWMIDADSRPKFR  261 (317)
T ss_dssp             HHHHHTTSCCTTTTSCGGGHHHHHHH--TCCC-------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHc--CCCC-------------------CCCcccCHHHHHHHHHhCCCChhhCcCHH
Confidence            589998 7899988776555444433  2100                   01134788999999999999999999999


Q ss_pred             HHHcCc
Q 042950           80 EALQHL   85 (216)
Q Consensus        80 eaL~Hp   85 (216)
                      |+++|-
T Consensus       262 eil~~l  267 (317)
T d1xkka_         262 ELIIEF  267 (317)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999983

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.83  E-value=7.1e-06  Score=67.51  Aligned_cols=33  Identities=27%  Similarity=0.574  Sum_probs=28.9

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcCccccC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQHLFFKR   89 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~HpfF~~   89 (216)
                      .+++++.+||.+||..||.+|||+.|+++  +|+.
T Consensus       240 ~~~~~l~~li~~cl~~dP~~Rps~~ei~~--~L~~  272 (287)
T d1opja_         240 GCPEKVYELMRACWQWNPSDRPSFAEIHQ--AFET  272 (287)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred             cchHHHHHHHHHHcCCCHhHCcCHHHHHH--HHHH
Confidence            57899999999999999999999999976  4443

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.82  E-value=7.5e-06  Score=67.60  Aligned_cols=62  Identities=19%  Similarity=0.273  Sum_probs=48.4

Q ss_pred             CcccccCC-CCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLFR-PLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG~-plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++|. ++|.+.+..+.+..|.+  |..                   ..+...+++++.+||.+||..||.+|||+.
T Consensus       232 l~ell~~~~~p~~~~~~~e~~~~v~~--~~~-------------------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~  290 (301)
T d1lufa_         232 LWEIFSYGLQPYYGMAHEEVIYYVRD--GNI-------------------LACPENCPLELYNLMRLCWSKLPADRPSFC  290 (301)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHT--TCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHccCCCCCCCCCHHHHHHHHHc--CCC-------------------CCCCccchHHHHHHHHHHcCCChhHCcCHH
Confidence            58999885 78999888888777654  221                   111235789999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      |+++
T Consensus       291 ev~~  294 (301)
T d1lufa_         291 SIHR  294 (301)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9964

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.72  E-value=2.7e-06  Score=70.05  Aligned_cols=75  Identities=13%  Similarity=0.125  Sum_probs=47.3

Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH-
Q 042950            1 MAELLLFRPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA-   79 (216)
Q Consensus         1 L~ELltG~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~-   79 (216)
                      +|||++|+.+|.+.+..+....+......    ..          ..+...+...+++++.+||.+||..||.+||++. 
T Consensus       203 l~el~tg~~P~~~~~~~~~~~~~~~~~~~----~~----------~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~  268 (299)
T d1ckia_         203 LMYFNLGSLPWQGLKAATKRQKYERISEK----KM----------STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSY  268 (299)
T ss_dssp             HHHHHHSSCTTCCCC-------HHHHHHH----HH----------HSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHH
T ss_pred             HHHHHhCCCcccccchHHHHHHHHHhhcc----cC----------CCChhHhccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            58999999999887655544444332110    00          0011222346789999999999999999999976 


Q ss_pred             --HHHcCccccC
Q 042950           80 --EALQHLFFKR   89 (216)
Q Consensus        80 --eaL~HpfF~~   89 (216)
                        ++|+|.|.+.
T Consensus       269 i~~~l~~~~~~~  280 (299)
T d1ckia_         269 LRQLFRNLFHRQ  280 (299)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc
Confidence              5678887654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=3.2e-05  Score=63.12  Aligned_cols=62  Identities=16%  Similarity=0.191  Sum_probs=43.7

Q ss_pred             CcccccC-CCCCCCCCHHHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCCHH
Q 042950            1 MAELLLF-RPLFQGTDEAEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPTAA   79 (216)
Q Consensus         1 L~ELltG-~plF~g~s~~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~ta~   79 (216)
                      ||||++| .++|.+.+..+.+..|....-.+                     ....++.++.+||.+||..||++|||+.
T Consensus       203 l~el~t~~~~~~~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~~l~~li~~cl~~~p~~RPt~~  261 (283)
T d1mqba_         203 MWEVMTYGERPYWELSNHEVMKAINDGFRLP---------------------TPMDCPSAIYQLMMQCWQQERARRPKFA  261 (283)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC---------------------CCTTCBHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhCCCCccccCCHHHHHHHHhccCCCC---------------------CchhhHHHHHHHHHHHCcCCHhHCcCHH
Confidence            5799985 56666666655555543311111                     1124678999999999999999999999


Q ss_pred             HHHc
Q 042950           80 EALQ   83 (216)
Q Consensus        80 eaL~   83 (216)
                      |+++
T Consensus       262 eil~  265 (283)
T d1mqba_         262 DIVS  265 (283)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9987

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=1.4e-05  Score=66.43  Aligned_cols=30  Identities=10%  Similarity=0.066  Sum_probs=28.3

Q ss_pred             CCCHHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           55 SASKDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        55 ~~s~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .+++++.+||.+||..||.+|||+.|+++|
T Consensus       258 ~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         258 YCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            467899999999999999999999999998

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=2.3e-05  Score=64.79  Aligned_cols=27  Identities=11%  Similarity=0.033  Sum_probs=24.4

Q ss_pred             HHHHHHHHhccccCCCCCCCHHHHHcC
Q 042950           58 KDAINLIESLCSWDPCKRPTAAEALQH   84 (216)
Q Consensus        58 ~~~~dLL~~mL~~dP~kR~ta~eaL~H   84 (216)
                      .++.+||.+||.+||++|||+.|++++
T Consensus       265 ~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         265 RVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            458899999999999999999999763

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=96.26  E-value=0.00044  Score=56.35  Aligned_cols=66  Identities=12%  Similarity=0.021  Sum_probs=44.3

Q ss_pred             CcccccCCCCCCCCCH---HHHHHHHHHhhCCCCHHHHHHHHhhccccCCCccccCCCCCHHHHHHHHhccccCCCCCCC
Q 042950            1 MAELLLFRPLFQGTDE---AEQMYKICSVLGNPTMDSWADELRQAMLSGVNLSELMPSASKDAINLIESLCSWDPCKRPT   77 (216)
Q Consensus         1 L~ELltG~plF~g~s~---~dql~~I~~ilG~p~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~dLL~~mL~~dP~kR~t   77 (216)
                      +|||++|+.+|.+.+.   ...+.+|....-.+                 ...++.+.+++++.+||..|+..+|.+||+
T Consensus       203 l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~-----------------~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~  265 (293)
T d1csna_         203 FMYFLRGSLPWQGLKAATNKQKYERIGEKKQST-----------------PLRELCAGFPEEFYKYMHYARNLAFDATPD  265 (293)
T ss_dssp             HHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS-----------------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCC
T ss_pred             HHHHHhCCCcCCCccchhHHHHHHHHHhccCCC-----------------ChHHhcCCCCHHHHHHHHHHhcCCcccCcC
Confidence            5899999999987543   33333333211111                 122234567899999999999999999998


Q ss_pred             HHHHHc
Q 042950           78 AAEALQ   83 (216)
Q Consensus        78 a~eaL~   83 (216)
                      .+.+.+
T Consensus       266 y~~l~~  271 (293)
T d1csna_         266 YDYLQG  271 (293)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            766543