BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042954
(720 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/766 (53%), Positives = 502/766 (65%), Gaps = 68/766 (8%)
Query: 3 MGEVVVSSEGGMDIDLETEKDGSSEVV-----------RTRWESFLPRMVLRVLLVEADD 51
MGE VVSS+ M+++L+ E+ E+ RW FLPRMVLRVLLVE DD
Sbjct: 1 MGEAVVSSDEVMEVELQEEEKRVXEMEGKEEKEKSSSGVVRWGRFLPRMVLRVLLVEPDD 60
Query: 52 STRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVME 111
STRQII+ALLRKC Y+VAAV DGL AWE LK P ++DL+LTEVELPSISGFALL+L+ME
Sbjct: 61 STRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSISGFALLSLIME 120
Query: 112 HDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHV 171
D+CK IPVIMMS HDSISMVLKCMLKGAADFL+KPVR+NEL NLWQHVWRRH+ GHV
Sbjct: 121 DDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELXNLWQHVWRRHAPTXGHV 180
Query: 172 PQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKG-SEKVSDAQSSRTSSPYLEAESAY 230
QNL +K S NN AS+HSSDY S+QK K SEK SD QSS T +PYLEAESAY
Sbjct: 181 SQNLSIAQNKVEVSSXNNTASNHSSDYVVSAQKKKECSEKGSDVQSSST-TPYLEAESAY 239
Query: 231 MQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKTG---------------- 274
M+NMQG SQLKCRS SN + ++ + +C +L+ E ES TG
Sbjct: 240 MENMQGFSQLKCRSVSNLSNEEIRKHEDCIELDKEPDRLESLTGGISNILLSFGFFEFLF 299
Query: 275 -------GASDELIVSEKLNRSGSEVAQCDD-----ALRLEEDYGCVKTMPQGEGEGPKN 322
GASD+L+V+ K+ GSEVA ++ A R EE + K + G+G GP +
Sbjct: 300 YSATLIYGASDKLLVAGKIITLGSEVAPGNEGYHSAAFRWEESHCRAKRVTSGDGVGPAS 359
Query: 323 DRINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRT 382
N DIT HGCN++ IEPSSGAIDLI TFDN+ + ++ S+ NDGI
Sbjct: 360 HIENTDITGENHGCNEKWIEPSSGAIDLISTFDNYPKDRNQFSSSNDGI----------- 408
Query: 383 KKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKAC----PTPTSNS 438
K F+P LELSLR+ P +S + G+DERHTLNHS +SAFSWYNN K+ PT N
Sbjct: 409 SKDGFAPQLELSLRRFQPCSSKNHGSDERHTLNHSNSSAFSWYNNGKSLQPLFPTSAINC 468
Query: 439 AELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHL 498
+ELK+ +S S E L NQL E+ G + C A S ++ NMT+LVMGQS QA AF L
Sbjct: 469 SELKEDASYSHERLFNQLPESTVGTSERCGAALSVTQGNMTTLVMGQSNQAGAAFPTSQL 528
Query: 499 GFIPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDV 558
G IPV GVRFD+ AGY H FP IF+T+ GL P WSP S+ Q+E F S+S++ NP++
Sbjct: 529 GLIPVQGVRFDSSXAGYGHXFPPIFHTQXGLPPIWSPKSAWQREQSHFSTSSSLYYNPEI 588
Query: 559 HDSEQVYGRTGEINHNSVDQTVCEQSKG-RPLEQLRHGSPAGNQSSNSGLCNGLANNSSS 617
EQ + NS DQTV EQ P+E+L HGSP QS++S LCNG+ ++ SS
Sbjct: 589 QSLEQ-----DCLTFNSTDQTVHEQENNLEPMEELSHGSPVAGQSASSSLCNGVVSHLSS 643
Query: 618 ----GTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRL 673
G +R D N +S A T P+++N L +D G+ + HS+QR+AAL KFRL
Sbjct: 644 SVHGGICNRNDGNPTSNGAVVRTTAPESVNDEGLSNNDALKGMDSHHSTQREAALMKFRL 703
Query: 674 KRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
KRKDRC++KKVRYQSRK LAEQRPRVKGQFVRQV+ +T ADGC
Sbjct: 704 KRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQVQTDT--PTADGC 747
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/696 (57%), Positives = 475/696 (68%), Gaps = 47/696 (6%)
Query: 38 PRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVEL 97
PR+ LR+LLVEADDSTRQII+ALLRKC Y+VAAV DGL AWETLK RPH+IDLVLTEVEL
Sbjct: 35 PRVALRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETLKGRPHNIDLVLTEVEL 94
Query: 98 PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLW 157
PSISGFALLTL+MEHDVCKNIPVIMMS +D+I+ VLKCMLKGAADFLIKPVR+NELRNLW
Sbjct: 95 PSISGFALLTLIMEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLW 154
Query: 158 QHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKN-KGSEKVSDAQ- 215
QHVWRR +L GG V K A SENN AS+HSSD +QKN + SEK SDAQ
Sbjct: 155 QHVWRRQTLTGGGY------VCQKIEASSENNAASNHSSDCYVYTQKNIECSEKGSDAQP 208
Query: 216 --SSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKT 273
S ++PYLEAESAYMQNMQGLSQ+KC S SN ++ M+R C KL+ ES+ PES+
Sbjct: 209 LVQSSCTTPYLEAESAYMQNMQGLSQMKCGSTSNLSNSHMDRHGGCNKLDNESITPESEN 268
Query: 274 GGASDELIVSEKLNRSGSEV---AQCDD--ALRLEEDYGCVKTMPQGEGEGPKNDRINAD 328
E NR GSEV + DD ALRL+E+ C K M Q EG ++ R NA+
Sbjct: 269 ---------EETSNRLGSEVVPFGEADDSTALRLKEN-ACAKPMSQNEGAPAESKRGNAN 318
Query: 329 ITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFS 388
I IHGCNDEL EPSSGAIDLIGTFDNH + S DG T K EF
Sbjct: 319 IASEIHGCNDELFEPSSGAIDLIGTFDNHNKCNAGNSNYTDG----------GTSKLEFD 368
Query: 389 PHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKA----CPTPTSNSAELKDG 444
PHLELSLR++ STSN QG D RH LNHS SAFSWYN+ K P +SN + K+
Sbjct: 369 PHLELSLRRTCMSTSNYQGTDGRHMLNHSNGSAFSWYNSGKMLQPLLPILSSNCTKAKED 428
Query: 445 SSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVP 504
+S++ E SN+LS G F AT SNS+EN+TSL +GQS QA + F LG IPVP
Sbjct: 429 ASEAHEPSSNELSGRTNGTFPQHDATLSNSQENITSLPIGQSGQAELQFPSHQLGMIPVP 488
Query: 505 GVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQV 564
GVR+DNI AGY H+FPS+F+++ GL P WSP S+ Q++ S V SNP++H SEQV
Sbjct: 489 GVRYDNICAGYGHLFPSMFHSQPGLPPVWSPKSTCQQDQSPLISSTLVQSNPEIHSSEQV 548
Query: 565 YGRTGEINHNSV---DQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYS 621
Y R+ E +NS+ D+ E++ P+E+ RHGS A Q++ S LCNG ++ + Y
Sbjct: 549 YHRSNETTNNSIHQADKAEHEENDLEPVEEHRHGSSAAGQTTTSSLCNGAVDHINGVAYG 608
Query: 622 RIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYD 681
+SS + T P++L+ FIHDG G+ + SSQR+AALTKFRLKRKDRCYD
Sbjct: 609 -----NSSTRGDENATAPESLSESGHFIHDGSRGLDSSRSSQREAALTKFRLKRKDRCYD 663
Query: 682 KKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
KKVRY SRK LAEQRPRVKGQFVRQV+ + N D
Sbjct: 664 KKVRYHSRKRLAEQRPRVKGQFVRQVQTDPLVGNVD 699
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/733 (54%), Positives = 493/733 (67%), Gaps = 60/733 (8%)
Query: 3 MGEVVVSSE----GGMDIDLETEKD--GSSEVVRTRWESFLPRMVLRVLLVEADDSTRQI 56
MG+VV+SS GGM ++LETEK GSSEVVR WE FLP+MVLRVLLVEADDSTRQI
Sbjct: 1 MGKVVLSSSSEEAGGMVVELETEKKDIGSSEVVR--WEKFLPKMVLRVLLVEADDSTRQI 58
Query: 57 ISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCK 116
I ALLRKCGYRV+AVPDGL AWETLK RPHSIDL+LTEVELP ISG+A L LVMEHDVCK
Sbjct: 59 IVALLRKCGYRVSAVPDGLMAWETLKERPHSIDLILTEVELPLISGYAFLALVMEHDVCK 118
Query: 117 NIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLH 176
NIPVIMMS HDSIS+VLKCMLKG+ADFL+KPVR+NELRNLWQHVWRR + G +P+N +
Sbjct: 119 NIPVIMMSSHDSISVVLKCMLKGSADFLVKPVRKNELRNLWQHVWRRQTQTAGKIPRNSN 178
Query: 177 DVYHKGGAISENNMASSHSSDYAASSQKNKG-SEKVSDAQSSRTSSPYLEAESAYMQNMQ 235
V A SENN A SSD+A S QKNK SEK SDAQSS T +P LEAESA+MQN+Q
Sbjct: 179 RV----EASSENNAA---SSDFATSLQKNKDCSEKGSDAQSSCT-TPCLEAESAHMQNIQ 230
Query: 236 GLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKTGGASDELIVSEKLNRSGSEV-- 293
GLS LK RSASN D E+ + AKL + PESKTG + V+E+ NR+ +
Sbjct: 231 GLSYLKYRSASNLSDADNEKYEDYAKLNKSPVNPESKTG-----VFVAERSNRTRPDREP 285
Query: 294 ---AQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSSGAIDL 350
A A RL E++ C K+ E P+NDR +A+ ++ G +D L E SSGAIDL
Sbjct: 286 YHGAYNPTASRLVEEHACAKSAIHDENSRPENDREHANSSF---GHDDVLAETSSGAIDL 342
Query: 351 IGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQGNDE 410
IG+F+N P S+LH+ T K EF P LELSLR+ +PS+S +QG DE
Sbjct: 343 IGSFNNQ---PKHTYA--------YSSLHDATNKFEFPPLLELSLRRLYPSSSKNQGLDE 391
Query: 411 RHTLNHSAASAFSWYNNS---KACPTPTSNSAELKDGSSKSDEILSNQLSENATGGFQPC 467
RH LNHS +SAFS YN+ PT SN ++ K+ +SKS + SNQL++N Q
Sbjct: 392 RHALNHSNSSAFSLYNSKTLQSLFPTSASNGSDSKEEASKSPDPSSNQLAQNVGTLSQIH 451
Query: 468 CATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKS 527
A+ S ++E +T+ V+GQS + +A P LG IPV G R DNI G H+F + YT+S
Sbjct: 452 DASLSGNQEIITTPVIGQSGKVELAHPSPQLGLIPVLGTRLDNISTGCGHVFSPLCYTQS 511
Query: 528 GLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNS-VDQTVCEQSKG 586
AW+PN + ++ FP +ASVHSNP+V DS+Q NH VDQ +Q+
Sbjct: 512 N--AAWNPNLA-GRQQSPFPTTASVHSNPEVLDSKQ--------NHKCYVDQNDLQQNNR 560
Query: 587 RPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRI----DRNSSSAKASGTGTVPQNL 642
P++++RH SPA QS++S LCN +ANN+SS Y D N+SS + +NL
Sbjct: 561 EPVDEMRHDSPAAGQSTSSSLCNRVANNNSSSAYESFGSGNDVNASSVGTAEKSMAQENL 620
Query: 643 NGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
N F HDGF G + SSQR+AALTKFRLKRKDRCY+K+VRYQSRK LAEQRPRVKGQ
Sbjct: 621 NNGGNFNHDGFGGSDSYRSSQREAALTKFRLKRKDRCYEKRVRYQSRKRLAEQRPRVKGQ 680
Query: 703 FVRQVKNETKDAN 715
FVRQ +N+ AN
Sbjct: 681 FVRQAQNDCPVAN 693
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/736 (54%), Positives = 484/736 (65%), Gaps = 65/736 (8%)
Query: 13 GMDIDLETEKD--GSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAA 70
GM ++LETEK GSSEVVR WE FLPRMVL VLLVEADDSTRQII+ALLRKC YRVAA
Sbjct: 15 GMAVELETEKKDIGSSEVVR--WEKFLPRMVLSVLLVEADDSTRQIIAALLRKCSYRVAA 72
Query: 71 VPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSIS 130
VPDGL AWETLK PH+IDL+LTEVELP ISG+ALLTLV EH VCKNIPVIMMS DSIS
Sbjct: 73 VPDGLMAWETLKGGPHNIDLILTEVELPLISGYALLTLVTEHAVCKNIPVIMMSSQDSIS 132
Query: 131 MVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNM 190
MVLKCMLKGAADFLIKPVR+NELRNLWQHVWRR +L G +PQNLH V A SE N
Sbjct: 133 MVLKCMLKGAADFLIKPVRKNELRNLWQHVWRRQTLSAGQIPQNLHKVE----ASSEINA 188
Query: 191 ASSHSSDYAASSQKNKG-SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTC 249
AS+ SSD SS+KNK SEK DAQSS T +P LEAESA+MQNMQGLSQ+K RSASN
Sbjct: 189 ASNGSSDSVMSSRKNKDCSEKGCDAQSSCT-TPCLEAESAHMQNMQGLSQMKYRSASNLS 247
Query: 250 STDMERQNECAKLETESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDA-----LRLEE 304
+TD E ECAKL+ + PE+KTG + V E+ NR S+ C A LRL E
Sbjct: 248 NTDREEFEECAKLDKSPVTPENKTG-----VFVPERPNRMESDGEPCSGAYNPTSLRLLE 302
Query: 305 DYGCVKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKL 364
++ C K+ Q E P+NDR A+ ++ GC+D E SSGAIDLIGT +N +
Sbjct: 303 EHACAKSAIQDENSRPENDRGLANSSF---GCDDVPFESSSGAIDLIGTLNNGPKT---- 355
Query: 365 STPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSW 424
S+LH T K EF+P LELSL++ +PS+S +QG DERH LNHS ASAFSW
Sbjct: 356 -------TYVHSSLHYGTNKFEFAPQLELSLKRLYPSSSKNQGVDERHALNHSHASAFSW 408
Query: 425 YN-------------------NSKAC----PTPTSNSAELKDGSSKSDEILSNQLSENAT 461
NSK P SN ++ K+ +SKS E+ SNQ ++N
Sbjct: 409 KKQGCWDSGRDGIGGSDFRRYNSKTLQPPFPASASNGSDSKEEASKSPELSSNQHAQNIN 468
Query: 462 GGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPS 521
Q AT S + ++MT ++GQS +A +A+ P G IPV DNI Y H F
Sbjct: 469 SISQRHGATLSGN-QDMTIPIIGQSGKAELAYPSPRHGLIPVRRGMLDNISTEYGHDFSP 527
Query: 522 IFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVC 581
++YT+S AWSP + ++ +P+S S+HSNPD+HDSE+ + + E +NSVDQ
Sbjct: 528 LYYTQSSA--AWSPKLAGWQQSP-YPLSTSIHSNPDIHDSEKNHRCSDETTYNSVDQNDH 584
Query: 582 EQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRI-DRNSSSAKASGTGTVPQ 640
+Q+ P++++RH SPA QS+ GLCNG N++ S Y R+ +AK
Sbjct: 585 QQNNKGPVDEVRHDSPAAGQST-GGLCNGAINHNKSSAYESFGSRDDGNAKEKAMAQ--D 641
Query: 641 NLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVK 700
NLN F DGF GI + SSQR+AALTKFRLKRKDRCY+KKVRYQSRK LAEQRPRVK
Sbjct: 642 NLNDGDNFNRDGFRGIDSLRSSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVK 701
Query: 701 GQFVRQVKNETKDANA 716
GQFVRQV+N++ AN
Sbjct: 702 GQFVRQVQNDSPIANG 717
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 374/740 (50%), Positives = 474/740 (64%), Gaps = 69/740 (9%)
Query: 3 MGEVVVSSEGG--MDIDLETEK-DGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISA 59
M EVVVSS G M++D E EK +GSSEVVR WE FLP MVLRVLLVEAD STRQIISA
Sbjct: 1 MAEVVVSSSSGGRMEVDKEREKKEGSSEVVR--WEKFLPNMVLRVLLVEADYSTRQIISA 58
Query: 60 LLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIP 119
LLRKC YRVAAVPDGL AWETLK P++IDL+LTEV+LP ISG+ALLTLVMEHD CKNIP
Sbjct: 59 LLRKCSYRVAAVPDGLMAWETLKDGPNNIDLILTEVDLPLISGYALLTLVMEHDFCKNIP 118
Query: 120 VIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVY 179
VIMMS HDSIS VLKCMLKGAADFLIKPVRRNEL+NLWQHVWRR +L G++P N +
Sbjct: 119 VIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELKNLWQHVWRRQTLTAGNIPPNSPNAQ 178
Query: 180 HKGGAISENNMASSHSSDYAASSQKNKG-SEKVSDAQSSRTSSPYLEAESAYMQNMQGLS 238
H+ + + AS HSSD A SS K K S K SDAQ S
Sbjct: 179 HR---VEAASSASDHSSDCATSSHKRKECSNKGSDAQG---------------------S 214
Query: 239 QLKCRSASNTCSTDMERQ-NECAKLETESLMPESKTGGA-----SDELIVSEKLNRSGSE 292
Q KCRS+SN ++ME++ E L+ +S +PESKTG + S + V+E R
Sbjct: 215 QPKCRSSSNL--SNMEKELYEDVTLDKKSAIPESKTGASLSNRVSQMVYVTEWSTRLQPV 272
Query: 293 VAQCDDA-----LRLEEDYGCVKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSSGA 347
A C++A L+LEE++ K Q E P+NDR NA T +H ND+ I S+G
Sbjct: 273 DATCNEAHNPTVLKLEEEHDFTKINIQDERAQPENDRSNASTTQ-LH--NDKHIRSSAGV 329
Query: 348 IDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQG 407
IDLIGTFDN P D ++++ K EF LELSLR+ FP++ +Q
Sbjct: 330 IDLIGTFDN---------GPKRTCGD--ISINDSANKSEFPSQLELSLRRFFPNSLKNQV 378
Query: 408 NDERHTLNHSAASAFSWYNNSKAC----PTPTSNSAELKDGSSKSDEILSNQLSENATGG 463
+ER LNHS ASAFS Y++SK PT TSN E K+ SSKS E+ SNQ+S+NA
Sbjct: 379 VEERRALNHSNASAFSRYSSSKILQPLFPTSTSNYTEFKEDSSKSPELSSNQISQNANSV 438
Query: 464 FQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIF 523
Q + + S++ +T+LV+GQS + +A+ I V G+R +NI GY H+F ++
Sbjct: 439 SQQQGSNPNGSQDIITNLVIGQSGKCELAYPDSQ-KLIAVSGLRLENICNGYGHVFSPLY 497
Query: 524 YTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQ 583
Y ++GL P+ SP + Q+E FPIS S+HSNP++ DSE ++ E V+Q + +Q
Sbjct: 498 YAQTGL-PSSSPKLASQREQSPFPISTSIHSNPEIQDSEGNNRQSAETATAPVEQNMHQQ 556
Query: 584 SKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTY----SRIDRNSSSAKASGTGTVP 639
+ E+L+HGSPA QS+ S +CN A++++S Y SR RN++ + TVP
Sbjct: 557 NNMEHPEELKHGSPAAGQSTGSSMCNSFADHNNSSAYGSFSSRTHRNATFVAPTEKPTVP 616
Query: 640 QNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRV 699
++ N + DGF G+ + SQR+AALTKFRLKRKDRCY+KKVRYQSRK LAE RPRV
Sbjct: 617 ESSNDGGIVACDGFRGMDSDRFSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAELRPRV 676
Query: 700 KGQFVRQVKNE--TKDANAD 717
KGQFVRQV+N+ DAN D
Sbjct: 677 KGQFVRQVQNDAPVADANDD 696
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 350/744 (47%), Positives = 454/744 (61%), Gaps = 71/744 (9%)
Query: 3 MGEVVVSSEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLR 62
MG +V + +G M +T+++ S +WE FLPRMVLRVLLVEADDSTRQIISALL
Sbjct: 1 MG-LVAADKGSM----QTQEEQSDNASAVQWERFLPRMVLRVLLVEADDSTRQIISALLH 55
Query: 63 KCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIM 122
KC Y+V A DGL AWETLK +P IDL+LTEV+LPSISGF+LLTL+MEHD+CKNIPVIM
Sbjct: 56 KCSYKVVAFCDGLKAWETLKNKPSDIDLILTEVDLPSISGFSLLTLIMEHDICKNIPVIM 115
Query: 123 MSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHV-PQNLHDVYHK 181
MS HDS+SMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRH++ H+ PQN +
Sbjct: 116 MSSHDSVSMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHAVC--HMPPQNFTLPEIE 173
Query: 182 GGAISENNMASSHSSDYAASSQKN-KGSEKVSDAQ---------SSRTSSPYLEAESAYM 231
G +EN+ AS+ SS AS+ KN + SEK S+AQ S +SP+LEAES Y+
Sbjct: 174 IGFAAENHAASNDSSGSVASTAKNGECSEKTSEAQKLHVLPTPVQSTCTSPFLEAESTYL 233
Query: 232 QNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKTGGASDELIVSE--KLNRS 289
+NMQ +SQLK +SN + D + K E ES + G S L VSE + N++
Sbjct: 234 ENMQDISQLK--RSSNLSNIDTVKHENSTKCERESDKHNDEAGEKS--LFVSEDSRCNKT 289
Query: 290 GSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSSGAID 349
LRL + Y C +T Q + + N +I IHGC+DEL++P +GAID
Sbjct: 290 FKPT-----GLRLGQGYECCETRNQDVVLKIELIKSNPEINTDIHGCSDELVDPYTGAID 344
Query: 350 LIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSL-RKSFPSTSNDQGN 408
LI TF N + D +K S T K +F LELSL R+ FP +S +
Sbjct: 345 LIATFKNLPKSTD----------EKCSFSSGNTAKFDFDTQLELSLRRRDFPGSSCKAAS 394
Query: 409 DERHTLNHSAASAFSWYNNSKAC----PTPTSNSAELKDGSSKSDEILSNQLSENATGGF 464
+ER LNHS ASAFS Y++SK PTP++ SA+L + S S E S++ SENA+
Sbjct: 395 EERQLLNHSNASAFSRYSSSKLLQPLFPTPSTISAKLTNSSLSSHE--SHKFSENASTSH 452
Query: 465 QPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFY 524
Q + ++E + + V+GQS Q LG+ P GV D+ G ++FPS+ Y
Sbjct: 453 Q--YGGKNQNQEKIITPVIGQSGQVDPKLPNSQLGYFPATGVTSDHKSTGNGNVFPSMLY 510
Query: 525 TKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQS 584
+SG+ P W+P S QKE FP S SNP H+SE + + + H S D+ + +Q
Sbjct: 511 AESGVHPIWTPKSVCQKESSPFPTITSSQSNPQSHNSE-CHLWSEDSTHAS-DKNLNDQI 568
Query: 585 KGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTY----SRIDRNSSSAKASGTGTVPQ 640
L+ H SP +QS+ + + AN++SSG Y R D N++SAK V +
Sbjct: 569 N---LDCETHDSPDASQSAGTSFFHDTANHNSSGVYRSMGCRSDGNATSAK------VAK 619
Query: 641 NLNGCTLFI------HDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAE 694
+G FI +DGF G + +S R+AALTKFRLKRKDRCY+KKVRYQSRK LAE
Sbjct: 620 ESHGS--FIDSGHCSYDGFIGTDSHRTSHREAALTKFRLKRKDRCYEKKVRYQSRKRLAE 677
Query: 695 QRPRVKGQFVRQVKNETKDANADG 718
QRPRVKGQFVRQV+++ A+ G
Sbjct: 678 QRPRVKGQFVRQVQDDHPVADVGG 701
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 349/736 (47%), Positives = 438/736 (59%), Gaps = 63/736 (8%)
Query: 3 MGEVVVSSEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLR 62
MGEV + T+ + S+ WE FLPRMVLRVLLVEADDSTRQII+ALLR
Sbjct: 1 MGEVPAVMQA-------TQGEQSNNASAVHWERFLPRMVLRVLLVEADDSTRQIIAALLR 53
Query: 63 KCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIM 122
KCGY+V A DGL AWETLK + +DL+LTEV+LPSISGF+LLTL+MEHD+CKNIPVIM
Sbjct: 54 KCGYKVVAFCDGLKAWETLKNKAFDLDLILTEVDLPSISGFSLLTLIMEHDICKNIPVIM 113
Query: 123 MSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKG 182
MS HDS+SMV KCMLKGAADFLIKPVR+NELRNLWQHVWRRH++ PQNL +
Sbjct: 114 MSSHDSVSMVFKCMLKGAADFLIKPVRKNELRNLWQHVWRRHAI--SRPPQNLTLPEIEL 171
Query: 183 GAISENNMASSHSSDYAASSQK-NKGSEKVSDAQS---------SRTSSPYLEAESAYMQ 232
G +EN+ AS+ SS AS+ K ++ SEK S+A S SP+LEAES YM+
Sbjct: 172 GFAAENHAASNDSSGSVASTPKDDECSEKTSEAHKLHVLPTPVQSTCPSPFLEAESTYME 231
Query: 233 NMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKTGGASDELIVSEKLNRSGSE 292
NMQ + QLK S+SN + D + K E ES + G S ++ + N++
Sbjct: 232 NMQDILQLK--SSSNLSNIDTVKHENSTKCERESDKHNDEAGEKSLFILEDARCNKTFKP 289
Query: 293 VAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSSGAIDLIG 352
LRL + Y C +T Q E + + N +I IH C+DEL++PS+GAIDLI
Sbjct: 290 T-----GLRLGQSYECHETRNQDEVLRIELIKSNPEINTDIHRCSDELVDPSTGAIDLIA 344
Query: 353 TFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQGNDERH 412
TF N + D +K S T K +F LELSLR+ FP +S ER
Sbjct: 345 TFKNLPKSTD----------EKCSFSSGNTAKFDFDTQLELSLRRDFPGSSCKAAFKERQ 394
Query: 413 TLNHSAASAFSWYNNSKAC----PTPTSNSAELKDGSSKSDEILSNQLSENATGGFQPCC 468
LNHS ASAFS Y+NSK PTP++ SA+L + S S E L +LS+N + Q
Sbjct: 395 ILNHSNASAFSRYSNSKLLQPLFPTPSTISAKLTNASQNSHESL--KLSKNTSTSHQ-YS 451
Query: 469 ATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKSG 528
S N E + + V+GQS Q LG P GV D+ G ++FPS Y KSG
Sbjct: 452 EKSQNQEEKIITSVIGQSGQVDPKLPNSQLGLFPATGVTSDHKSKGNGNVFPSKLYAKSG 511
Query: 529 LQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGRP 588
+ P +P S QKE FP S S SNP H+SE+ + + H S DQ V +QS
Sbjct: 512 VHPISTPKSVCQKESSPFPTSTSSQSNPQSHNSER-HHWLEDATHAS-DQNVNDQSN--- 566
Query: 589 LEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLF 648
LE H SPA +QS+ + AN++SSG Y R D N++SAK + +F
Sbjct: 567 LECETHDSPAASQSAGPSFFHDTANHNSSGVY-RSDGNATSAKVAKESH--------EIF 617
Query: 649 I------HDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
I +DGF G + +SQR+AALTKFRLKRKDRCY+KKVRYQSRK LAEQRPRVKGQ
Sbjct: 618 IDSGQRSYDGFIGTDSHRTSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQ 677
Query: 703 FVRQVKNETKDANADG 718
FVRQV ++ A+ G
Sbjct: 678 FVRQVHDDHPVADVGG 693
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 293/524 (55%), Positives = 352/524 (67%), Gaps = 42/524 (8%)
Query: 3 MGEVVVSSEGGMDIDLETEKDGSSEVV-----------RTRWESFLPRMVLRVLLVEADD 51
MGE VVSS+ M+++L+ E+ E+ RW FLPRMVLRVLLVE DD
Sbjct: 1 MGEAVVSSDEVMEVELQEEEKRVREMEGKEEKEKSSSGVVRWGRFLPRMVLRVLLVEPDD 60
Query: 52 STRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVME 111
STRQII+ALLRKC Y+VAAV DGL AWE LK P ++DL+LTEVELPSISGFALL+L+ME
Sbjct: 61 STRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSISGFALLSLIME 120
Query: 112 HDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHV 171
D+CK IPVIMMS HDSISMVLKCMLKGAADFL+KPVR+NELRNLWQHVWRRH+ GHV
Sbjct: 121 DDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHVWRRHAPTSGHV 180
Query: 172 PQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKG-SEKVSDAQSSRTSSPYLEAESAY 230
QNL +K SENN AS+HSSDY S+QK K SEK SD QSS T +PYLEAESAY
Sbjct: 181 SQNLSIAQNKVEVSSENNTASNHSSDYVVSAQKKKECSEKGSDVQSSST-TPYLEAESAY 239
Query: 231 MQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKTGGASDELIVSEKLNRSG 290
M+NMQG SQLKCRS SN + ++ + +C +L+ E ES TGG K+ G
Sbjct: 240 MENMQGFSQLKCRSVSNLSNEEIRKHEDCIELDKEPDRLESLTGG---------KIITLG 290
Query: 291 SEVAQCDD-----ALRLEEDYGCVKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSS 345
SEVA ++ A R EE + K + G+G GP + N DIT HGCN++ IEPSS
Sbjct: 291 SEVAPGNEGYHSAAFRWEESHCRAKRVTSGDGVGPASHIENTDITGENHGCNEKWIEPSS 350
Query: 346 GAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSND 405
GAIDLI TFDN+ + ++ S+ NDGI K F+P LELSLR+ P +S +
Sbjct: 351 GAIDLISTFDNYPKDRNQFSSSNDGI-----------SKDGFAPQLELSLRRFQPCSSKN 399
Query: 406 QGNDERHTLNHSAASAFSWYNNSKAC----PTPTSNSAELKDGSSKSDEILSNQLSENAT 461
G+DERHTLNHS +SAFSWYNN K+ PT N +ELK+ +S S E L NQL E+
Sbjct: 400 HGSDERHTLNHSNSSAFSWYNNGKSLQPLFPTSAINCSELKEDASYSHERLFNQLPESTV 459
Query: 462 GGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPG 505
G + C A S ++ NMT+LVMGQS QA AF LG IPV G
Sbjct: 460 GTSERCGAALSVTQGNMTTLVMGQSNQAGAAFPTSQLGLIPVQG 503
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 94/133 (70%), Gaps = 4/133 (3%)
Query: 588 PLEQLRHGSPAGNQSSNSGLCNGLANNSSS----GTYSRIDRNSSSAKASGTGTVPQNLN 643
P+E+L HGSP QS++S LCNG+ ++ SS G +R D N +S A T P+++N
Sbjct: 509 PMEELSHGSPVAGQSASSSLCNGVVSHLSSSVHGGICNRNDGNPTSNGAVVRTTAPESVN 568
Query: 644 GCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQF 703
L +D G+ + HS+QR+AAL KFRLKRKDRC++KKVRYQSRK LAEQRPRVKGQF
Sbjct: 569 DEGLSNNDALKGMDSHHSTQREAALMKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQF 628
Query: 704 VRQVKNETKDANA 716
VRQV+ +T A+
Sbjct: 629 VRQVQTDTPTADG 641
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 346/734 (47%), Positives = 427/734 (58%), Gaps = 74/734 (10%)
Query: 3 MGEVVVSSEGGMDIDLET--EKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISAL 60
MGEVVVSSE G +K+ S VVR WE FLPRMVLRVLLVEADDSTRQII+AL
Sbjct: 1 MGEVVVSSEAGGGGMEGEVEKKEVGSGVVR--WERFLPRMVLRVLLVEADDSTRQIIAAL 58
Query: 61 LRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPV 120
LRKC Y+VAAVPDGL AWE LK RPH+IDL+LTEVELPSISGFALLTLVMEH++CKNIPV
Sbjct: 59 LRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSISGFALLTLVMEHEICKNIPV 118
Query: 121 IMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRH-SLLGGHVPQNLHDVY 179
IMMS H SI+ V KCML+GAADFL+KPVRRNEL+NLWQHVWRR S + G+ PQ+
Sbjct: 119 IMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHVWRRQSSTVSGNGPQDESVAQ 178
Query: 180 HKGGAISENNMASSHSSDYAASSQKNKGS-EKVSDAQSSRTSSPYLEAESAYMQNMQGLS 238
K A SENN S+HSSD+ A QKNK + KVSDAQSS S P LEAESAYM+ MQ S
Sbjct: 179 QKVEATSENNPTSNHSSDHVACIQKNKEALNKVSDAQSS-CSKPDLEAESAYMETMQDFS 237
Query: 239 QLKCRSASNTCSTDMERQNECAKLETESLMPESKTGGASDELIVSEKLNRSGSEVAQCDD 298
S S T M++ ECAKL + LM + GG + A C D
Sbjct: 238 N-PTWSRSLVSDTKMQKNEECAKLGPKFLMHNKEAGGTLE---------------AACRD 281
Query: 299 ALRLEEDYGCVKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQ 358
V TM Q E P+ND A+ G N L S AIDLIG FDN +
Sbjct: 282 ----------VNTMTQPEAVEPENDGQGANAPSEACGNNAILGSSSREAIDLIGVFDNSK 331
Query: 359 EVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSA 418
+ S+ N+G TKK + P L+LSLR+S PS+ +Q DERHTLNHS
Sbjct: 332 KCTYGNSSSNNG-----------TKKSDSIPQLDLSLRRSHPSSPENQVADERHTLNHSN 380
Query: 419 ASAFSWYNNSKACPTPTSNSA---ELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSR 475
SAFS Y N P ++ + K+ + SD+ +LS+ TG + + +++
Sbjct: 381 GSAFSRYINRSLQPPHLPSTGVFNQQKNFGADSDK----RLSQLVTGYNSDITSPTLSTQ 436
Query: 476 ENMTSLVMGQSEQAAVAFAGPHLGFIPVP----GVRFDNIFAGYSHIFPSIFYTKSGLQP 531
++ SL S + +A GP P P GVRFD + GYS + P IF +SG P
Sbjct: 437 RSVISLATSPSGRVEIALCGPQQRAFPAPVPVRGVRFDGLCTGYSSVVPPIFSAQSGPSP 496
Query: 532 AWSPNSSHQKEHHRFPISASVHSNP------DVHDSEQVYGRTGEINHNSVDQTVCE-QS 584
SP S+ Q E S +NP + DS+ + + +NS QT + +
Sbjct: 497 MPSPGSAGQHE-------LSFRANPCHLSRHETSDSQHLCNALEQNANNSTSQTNHKPEH 549
Query: 585 KGRPLEQLRHGSPAGNQSSNSGLCNGLANN-SSSGTYSRIDRNSSSAKASGTGTVPQNLN 643
K LE H SPA +Q+S+S NG A+N +S G S N ++ + + N
Sbjct: 550 KLDSLEGQGHFSPATDQNSSSSFGNGGASNLNSFGCGSICGSNGNANTVAVVQAAAEGKN 609
Query: 644 GCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQF 703
+F H+G ++ S QR+AALTKFRLKRKDRC++KKVRY+SRK LAEQRPRVKGQF
Sbjct: 610 EEGIFSHEGH----SQRSIQREAALTKFRLKRKDRCFEKKVRYESRKKLAEQRPRVKGQF 665
Query: 704 VRQVKNETKDANAD 717
VRQV A D
Sbjct: 666 VRQVHTIPPPAEPD 679
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/476 (57%), Positives = 328/476 (68%), Gaps = 31/476 (6%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
MVLRVLLVE DDSTRQII+ALLRKC Y+VAAV DGL AWE LK P ++DL+LTEVELPS
Sbjct: 1 MVLRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPS 60
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
ISGFALL+L+ME D+CK IPVIMMS HDSISMVLKCMLKGAADFL+KPVR+NELRNLWQH
Sbjct: 61 ISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQH 120
Query: 160 VWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKG-SEKVSDAQSSR 218
VWRRH+ GHV QNL +K SENN AS+HSSDY S+QK K SEK SD QSS
Sbjct: 121 VWRRHAPTSGHVSQNLSIAQNKVEVSSENNTASNHSSDYVVSAQKKKECSEKGSDVQSSS 180
Query: 219 TSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKTGGASD 278
T +PYLEAESAYM+NMQG SQLKCRS SN + ++ + +C +L+ E ES TGG
Sbjct: 181 T-TPYLEAESAYMENMQGFSQLKCRSVSNLSNEEIRKHEDCIELDKEPDRLESLTGG--- 236
Query: 279 ELIVSEKLNRSGSEVAQCDD-----ALRLEEDYGCVKTMPQGEGEGPKNDRINADITYGI 333
K+ GSEVA ++ A R EE + K + G+G GP + N DIT
Sbjct: 237 ------KIITLGSEVAPGNEGYHSAAFRWEESHCRAKRVTSGDGVGPASHIENTDITGEN 290
Query: 334 HGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLEL 393
HGCN++ IEPSSGAIDLI TFDN+ + ++ S+ NDGI K F+P LEL
Sbjct: 291 HGCNEKWIEPSSGAIDLISTFDNYPKDRNQFSSSNDGI-----------SKDGFAPQLEL 339
Query: 394 SLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKAC----PTPTSNSAELKDGSSKSD 449
SLR+ P +S + G+DERHTLNHS +SAFSWYNN K+ PT N +ELK+ +S S
Sbjct: 340 SLRRFQPCSSKNHGSDERHTLNHSNSSAFSWYNNGKSLQPLFPTSAINCSELKEDASYSH 399
Query: 450 EILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPG 505
E L NQL E+ G + C A S ++ NMT+LVMGQS QA AF LG IPV G
Sbjct: 400 ERLFNQLPESTVGTSERCGAALSVTQGNMTTLVMGQSNQAGAAFPTSQLGLIPVQG 455
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 94/133 (70%), Gaps = 4/133 (3%)
Query: 588 PLEQLRHGSPAGNQSSNSGLCNGLANNSSS----GTYSRIDRNSSSAKASGTGTVPQNLN 643
P+E+L HGSP QS++S LCNG+ ++ SS G +R D N +S A T P+++N
Sbjct: 461 PMEELSHGSPVAGQSASSSLCNGVVSHLSSSVHGGICNRNDGNPTSNGAVVRTTAPESVN 520
Query: 644 GCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQF 703
L +D G+ + HS+QR+AAL KFRLKRKDRC++KKVRYQSRK LAEQRPRVKGQF
Sbjct: 521 DEGLSNNDALKGMDSHHSTQREAALMKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQF 580
Query: 704 VRQVKNETKDANA 716
VRQV+ +T A+
Sbjct: 581 VRQVQTDTPTADG 593
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 321/735 (43%), Positives = 425/735 (57%), Gaps = 78/735 (10%)
Query: 20 TEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWE 79
T ++ ++EVVR WE FLPRMVLRVLLVEAD STRQII+ALLRKC Y V AVPDGL AWE
Sbjct: 9 TTENSNAEVVR--WERFLPRMVLRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWE 66
Query: 80 TLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKG 139
TLK + +DL+LTEVELP+ISGFALL+L+MEHD+CKNIPVIMMS HDS+SM LKCMLKG
Sbjct: 67 TLKKKAPELDLILTEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKG 126
Query: 140 AADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYA 199
A DFLIKP+R+NELRNLWQHVWRRH++ QN K SE+N AS+ SS
Sbjct: 127 AVDFLIKPIRKNELRNLWQHVWRRHAI--STPTQNTTFSPKKLKTASEDNSASNKSSGSV 184
Query: 200 ASSQK-NKGSEKVSDAQ---------------SSRTSSPYLEAESAYMQNMQGLSQLKCR 243
ASS+K N+ SE++S+AQ S +SP EA+S Y++NMQ + LK
Sbjct: 185 ASSKKNNECSERLSEAQDVPQYVHCQVMQTLVQSTCTSPIFEAKSTYVENMQDVPPLK-- 242
Query: 244 SASNTCSTDMERQNECAKLETESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDA---- 299
+S DM + + A+ E ES +T S ++ S+ A+CD
Sbjct: 243 -SSKLNKIDMVKHEKFAQFERESAEHNDETEDKSVTIV---------SDAARCDKTSELT 292
Query: 300 -LRLEEDYGCVKTMPQGEGEGPKN--DRINADITYGIHGCNDELIEPSSGAIDLIGTFDN 356
LR E+D G + + E E K+ D N+ ++ + GC+ E ++PS GAIDLI T N
Sbjct: 293 ELRPEQDCGVAEPETENEDEILKSELDGDNSHVSM-MQGCSAERVKPSKGAIDLIATVGN 351
Query: 357 HQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQGN---DERHT 413
+ D+ + N G T K + LELSLR FP +S +Q + +E
Sbjct: 352 LPKHLDENCSLNGG----------NTTKFDCETQLELSLRSDFPGSSGNQASEATEESQR 401
Query: 414 LNHSAASAFSWYNNSKAC----PTPTSNSAELKDGSSKSDEILSNQLSENATGGFQPCCA 469
LNHS SAFSWY+NSK TP+ E+ + S S E S++LS +G Q
Sbjct: 402 LNHSNTSAFSWYSNSKLLQPHFSTPSITFPEVNNLSWDSHE--SHKLSGITSGNCQ--YG 457
Query: 470 TSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKSGL 529
S+ + ENM V+ Q Q + G +PV GV + G+ ++F S+FY +SG+
Sbjct: 458 GSNQNLENMIGTVICQYGQVTPKLSNSQCGLLPVSGVISNLKSEGHGNVFTSLFYAQSGI 517
Query: 530 QPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGE---INHNSVDQTVCEQSKG 586
P SP Q E FP S S S P+ H+S+Q++ + + +N N D T + +
Sbjct: 518 HPMSSPKPVCQNESSPFPTSTSTQSYPESHNSDQLHDCSNDATCLNQNVKDNTDSDHA-- 575
Query: 587 RPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDR----NSSSAKASGTGTVPQNL 642
RH SP +QS+ + LC+ AN+ +S Y +D N++SA S +
Sbjct: 576 ------RHDSPVADQSAGNSLCHDAANHVNSSAYGSMDSGNDGNATSAIVSKNAPDGFSD 629
Query: 643 NGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+GC + DGF SSQR+A L KFRLKRK+RC++KKVRYQSRK LAEQRPRVKGQ
Sbjct: 630 SGCHNY--DGFRVTDPHRSSQREAVLVKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQ 687
Query: 703 FVRQVKNETKDANAD 717
FVRQ + +A D
Sbjct: 688 FVRQHDHPVAEAGGD 702
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 324/752 (43%), Positives = 431/752 (57%), Gaps = 93/752 (12%)
Query: 20 TEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWE 79
T ++ ++EVVR WE FLPRMVLRVLLVEAD STRQII+ALLRKC Y V AVPDGL AWE
Sbjct: 9 TTENSNAEVVR--WERFLPRMVLRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWE 66
Query: 80 TLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKG 139
TLK + +DL+LTEVELP+ISGFALL+L+MEHD+CKNIPVIMMS HDS+SM LKCMLKG
Sbjct: 67 TLKKKAPELDLILTEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKG 126
Query: 140 AADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYA 199
A DFLIKP+R+NELRNLWQHVWRRH++ QN K SE+N AS+ SS
Sbjct: 127 AVDFLIKPIRKNELRNLWQHVWRRHAI--STPTQNTTFSPKKLKTASEDNSASNKSSGSV 184
Query: 200 ASSQK-NKGSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQ-LKCRS----ASNTCST-- 251
ASS+K N+ SE++S+AQS+ T SP EAES Y++NMQ + Q + C+ +TC++
Sbjct: 185 ASSKKNNECSERLSEAQSTCT-SPIFEAESTYVENMQDVPQYVHCQVMQTLVQSTCTSPI 243
Query: 252 -------------------------DMERQNECAKLETESLMPESKTGGASDELIVSEKL 286
DM + + A+ E ES +T S ++
Sbjct: 244 FEAKSTYVENMQDVPPLKSSKLNKIDMVKHEKFAQFERESAEHNDETEDKSVTIV----- 298
Query: 287 NRSGSEVAQCDDA-----LRLEEDYGCVKTMPQGEGEGPKN--DRINADITYGIHGCNDE 339
S+ A+CD LR E+D G + + E E K+ D N+ ++ + GC+ E
Sbjct: 299 ----SDAARCDKTSELTELRPEQDCGVAEPETENEDEILKSELDGDNSHVSM-MQGCSAE 353
Query: 340 LIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSF 399
++PS GAIDLI T N + D+ + N G T K + LELSLR F
Sbjct: 354 RVKPSKGAIDLIATVGNLPKHLDENCSLNGG----------NTTKFDCETQLELSLRSDF 403
Query: 400 PSTSNDQGN---DERHTLNHSAASAFSWYNNSKAC----PTPTSNSAELKDGSSKSDEIL 452
P +S +Q + +E LNHS SAFSWY+NSK TP+ E+ + S S E
Sbjct: 404 PGSSGNQASEATEESQRLNHSNTSAFSWYSNSKLLQPHFSTPSITFPEVNNLSWDSHE-- 461
Query: 453 SNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIF 512
S++LS +G Q S+ + ENM V+ Q Q + G +PV GV +
Sbjct: 462 SHKLSGITSGNCQ--YGGSNQNLENMIGTVICQYGQVTPKLSNSQCGLLPVSGVISNLKS 519
Query: 513 AGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGE-- 570
G+ ++F S+FY +SG+ P SP Q E FP S S S P+ H+S+Q++ + +
Sbjct: 520 EGHGNVFTSLFYAQSGIHPMSSPKPVCQNESSPFPTSTSTQSYPESHNSDQLHDCSNDAT 579
Query: 571 -INHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDR---- 625
+N N D T + + RH SP +QS+ + LC+ AN+ +S Y +D
Sbjct: 580 CLNQNVKDNTDSDHA--------RHDSPVADQSAGNSLCHDAANHVNSSAYGSMDSGNDG 631
Query: 626 NSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVR 685
N++SA S + +GC + DGF SSQR+A L KFRLKRK+RC++KKVR
Sbjct: 632 NATSAIVSKNAPDGFSDSGCHNY--DGFRVTDPHRSSQREAVLVKFRLKRKERCFEKKVR 689
Query: 686 YQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
YQSRK LAEQRPRVKGQFVRQ + +A D
Sbjct: 690 YQSRKRLAEQRPRVKGQFVRQHDHPVAEAGGD 721
>gi|356559647|ref|XP_003548110.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 706
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 326/743 (43%), Positives = 435/743 (58%), Gaps = 94/743 (12%)
Query: 20 TEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWE 79
T ++ ++E+V+ WE FLPRMVLRVLLVEAD STRQII+ALLRKC + AVPDGL AWE
Sbjct: 12 TTENSNAELVQ--WERFLPRMVLRVLLVEADHSTRQIIAALLRKC---IIAVPDGLKAWE 66
Query: 80 TLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKG 139
TLK + +DL+LTEVELP+ISGFALL+L+MEHD+CK+IPVIMMS HDS++M LKCML G
Sbjct: 67 TLKKKASELDLILTEVELPAISGFALLSLIMEHDICKSIPVIMMSSHDSVNMALKCMLNG 126
Query: 140 AADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYA 199
A DFLIKP+R+NELRNLWQHVWRRH+++ QN K SE+N AS+ S+
Sbjct: 127 AVDFLIKPIRKNELRNLWQHVWRRHTIITP--TQNTTFSPKKLKTASEDNSASNKSNGSV 184
Query: 200 ASSQK-NKGSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQ-LKCR----SASNTC---- 249
ASS+K N+ SE++S+AQS+ T SP +EA S YM+NMQ +SQ + C+ +TC
Sbjct: 185 ASSKKNNECSERLSEAQSTCT-SPIMEAASTYMENMQDVSQDVHCQVMQTHVQSTCASPI 243
Query: 250 ----STDMERQNECAKLETESLMP------------ESKTGGASDELIVSEKLNRSGSEV 293
ST +E + +LE+ L E K+ +DE +K SE
Sbjct: 244 FEAESTFVENMQDVPQLESSKLNKIDMVDHEKFAKFERKSAKHNDE--TEDKSITIVSEA 301
Query: 294 AQCDDA-----LRLEEDYGCVKTMPQGEGEGPKND--RINADITYGIHGCNDELIEPSSG 346
A+CD + L LE+D G + + E E K++ R N+ ++ +HGCN E ++PS G
Sbjct: 302 ARCDKSFELTDLMLEQDCGVAEPETENEDEILKSELGRDNSHVSI-LHGCNAEQVKPSKG 360
Query: 347 AIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQ 406
AIDLI TF N + P++ + N G T K + LELSLR FP +S Q
Sbjct: 361 AIDLIATFGNLPKHPNENCSLNGG----------NTTKFDCETQLELSLRSDFPGSSGKQ 410
Query: 407 GN---DERHTLNHSAASAFSWYNNSKAC----PTPTSNSAELKDGSSKSDEILSNQLSEN 459
+ +E LNHS SAFSWY+NSK P+ S ++ + S E L +LS N
Sbjct: 411 ASESTEESQRLNHSNTSAFSWYSNSKLLQPLFSPPSITSPKVNWLNWDSHECL--KLSGN 468
Query: 460 ATGGFQPCCATSSNSR-ENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHI 518
C SN ENM S V+GQ G +PV GV G+ H+
Sbjct: 469 -------CQYDDSNQNLENMISTVIGQ------------YGLLPVSGVISKLKSEGHGHV 509
Query: 519 FPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQ 578
F S+FY +SG+ P SP Q E FP S S SNP+ H S+Q + + + +DQ
Sbjct: 510 FTSVFYAQSGIHPMLSPKPVCQNESSPFPTSTSSQSNPESHCSDQPHDCSNDA--TCLDQ 567
Query: 579 TVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDR----NSSSAKASG 634
V + + + RH SPA +QS+ + LC+ AN+ +S Y +D +++SA S
Sbjct: 568 NVKDNTDS---DHARHESPAADQSAGNNLCHDAANHVNSSAYGSMDSGNDGHATSAIVSK 624
Query: 635 TGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAE 694
+ + +GC + DGF + SSQR+AAL KFRLKRK+RC++KKVRYQSRK LAE
Sbjct: 625 NTSDGFSDSGCHNY--DGFRVTDSHRSSQREAALVKFRLKRKERCFEKKVRYQSRKRLAE 682
Query: 695 QRPRVKGQFVRQVKNETKDANAD 717
QRPRVKGQFVRQ + +A D
Sbjct: 683 QRPRVKGQFVRQHNHPFAEAGGD 705
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 323/723 (44%), Positives = 397/723 (54%), Gaps = 118/723 (16%)
Query: 3 MGEVVVSSEGGMDIDLET--EKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISAL 60
MGEVVVSSE G +K+ S VVR WE FLPRMVLRVLLVEADDSTRQII+AL
Sbjct: 1 MGEVVVSSEAGGGGMEGEVEKKEVGSGVVR--WERFLPRMVLRVLLVEADDSTRQIIAAL 58
Query: 61 LRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPV 120
LRKC Y+VAAVPDGL AWE LK RPH+IDL+LTEVELPSISGFALLTLVMEH++CKNIPV
Sbjct: 59 LRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSISGFALLTLVMEHEICKNIPV 118
Query: 121 IMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRH-SLLGGHVPQNLHDVY 179
IMMS H SI+ V KCML+GAADFL+KPVRRNEL+NLWQHVWRR S + G+ PQ+
Sbjct: 119 IMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHVWRRQSSTVSGNGPQDESVAQ 178
Query: 180 HKGGAISENNMASSHSSDYAASSQKNKGS-EKVSDAQSSRTSSPYLEAESAYMQNMQGLS 238
K A SENN S+HSSD+ A QKNK + KVSDAQSS S P LEAESAYM+ MQ S
Sbjct: 179 QKVEATSENNPTSNHSSDHVACIQKNKEALNKVSDAQSS-CSKPDLEAESAYMETMQDFS 237
Query: 239 QLKCRSASNTCSTDMERQNECAKLETESLMPESKTGGASDELIVSEKLNRSGSEVAQCDD 298
S S T M++ ECAKL + LM + GG + A C D
Sbjct: 238 N-PTWSRSLVSDTKMQKNEECAKLGPKFLMHNKEAGGTLE---------------AACRD 281
Query: 299 ALRLEEDYGCVKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQ 358
V TM Q E P+ND A+ G N L S AIDLIG FDN +
Sbjct: 282 ----------VNTMTQPEAVEPENDGQGANAPSEACGNNAILGSSSREAIDLIGVFDNSK 331
Query: 359 EVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSA 418
+ S+ N+G TKK + P L+LSLR+S PS+ +Q DERHTLNHS
Sbjct: 332 KCTYGNSSSNNG-----------TKKSDSIPQLDLSLRRSHPSSPENQVADERHTLNHSN 380
Query: 419 ASAFSWYNNSKACPTPTSNSA---ELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSR 475
SAFS Y N P ++ + K+ + SD+ +LS+ TG + + +++
Sbjct: 381 GSAFSRYINRSLQPPHLPSTGVFNQQKNFGADSDK----RLSQLVTGYNSDITSPTLSTQ 436
Query: 476 ENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSP 535
++ SL S + +A GP P P + N +
Sbjct: 437 RSVISLATSPSGRVEIALCGPQQRAFPAPVPQNAN---------------------NSTS 475
Query: 536 NSSHQKEHHRFPISASVHSNPDV-HDSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRH 594
++H+ EH + H +P +S +G G N NS C
Sbjct: 476 QTNHKPEHKLDSLEGQGHFSPATDQNSSSSFGNGGASNLNSFG---C------------- 519
Query: 595 GSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFN 654
GS G+ NG AN + +A+ G +N G +F H+G
Sbjct: 520 GSICGS--------NGNAN------------TVAVVQAAAEG---KNEEG--IFSHEGH- 553
Query: 655 GISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDA 714
++ S QR+AALTKFRLKRKDRC++KKVRY+SRK LAEQRPRVKGQFVRQV A
Sbjct: 554 ---SQRSIQREAALTKFRLKRKDRCFEKKVRYESRKKLAEQRPRVKGQFVRQVHTIPPPA 610
Query: 715 NAD 717
D
Sbjct: 611 EPD 613
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 301/709 (42%), Positives = 404/709 (56%), Gaps = 98/709 (13%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYR-VAAVPDGLAAWETLKCRPHSID 89
RWE FLPRMVLRVLLVEADDSTRQII+ALLRKC Y+ VA V DGL AWE LK RPH+ID
Sbjct: 54 VRWERFLPRMVLRVLLVEADDSTRQIIAALLRKCSYKAVATVSDGLKAWEILKERPHNID 113
Query: 90 LVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
L+LTEV+LPS+SG+ALLTL+MEH++CKNIPVIMMS DSI V KCML+GAAD+L+KP+R
Sbjct: 114 LILTEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIR 173
Query: 150 RNELRNLWQHVWRRHSLL-GGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNK-G 207
+NELRNLWQHVWR+ S L GG+ P + K A SENN +HSS AS Q++K
Sbjct: 174 KNELRNLWQHVWRKQSSLGGGNGPHDESVGQDKTEATSENNADGNHSSGEMASIQRSKEQ 233
Query: 208 SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESL 267
+ K SD+QSS T P LEAE A+M+NMQ Q S + T+M++ E L + L
Sbjct: 234 AVKRSDSQSSCT-KPGLEAEGAHMENMQEFLQ-PVWSKFSLTDTNMQKHEEHVNLGQKLL 291
Query: 268 MPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINA 327
+ +S+ GS A C+D+ ++ D K + G G R+ A
Sbjct: 292 VRDSEA---------------EGSATAVCEDSNKITVD----KEITPGSG------RVTA 326
Query: 328 DITYGIHGCND--ELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKC 385
+I I GC+ L AID +G NH S+ +N
Sbjct: 327 NI--AIEGCDKIGALANSPREAIDFMGASTNH------------------SSFNNVEIHF 366
Query: 386 EFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELKDGS 445
SPHL+LSLR+S PS Q +ERHTL HS ASAF+WY N +A P S A +
Sbjct: 367 CSSPHLDLSLRRSHPSGFETQVTEERHTLRHSNASAFTWYTN-RASQLPHSALA----NT 421
Query: 446 SKSDEILSN---QLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGF-- 500
+E +N ++S N G + + ++R + SL GQ+++ + +
Sbjct: 422 GNQEEFRANYDGKISSNVNGYNSDALSLAPSTRRSAISLAAGQTKEYEIVTSSSGEKVFP 481
Query: 501 --IPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKE--HHRFPISASVHSNP 556
IPV RF+N+ Y + P P S +S+ QKE H P S + +
Sbjct: 482 IHIPVKDTRFNNLCNSYGAVLP----------PMMSQSSASQKEPIHKVNPFQCSNYGST 531
Query: 557 DVHDSEQVYGRTGEINHNSVDQTVCEQ-SKGRPLEQLRHGSPAGNQSSNSGLCNGLANN- 614
V Q+ R G+ ++S++ ++ +Q +K LE H S A +QS++S CNG A++
Sbjct: 532 SV----QLCDRLGQNANDSINGSLQKQENKLDSLEGREHISSATDQSASSSFCNGAASHF 587
Query: 615 ------SSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAAL 668
S+SG+YS D+ ++ + AS ++ N +F H+ ++ S QR+AAL
Sbjct: 588 NSIGYGSASGSYSNADQIATVSAAS------ESKNEEGVFTHNS----NSHRSIQREAAL 637
Query: 669 TKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
TKFRLKRK+RCY+KKVRY+SRK LAEQRPRVKGQFVRQV + A D
Sbjct: 638 TKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHIDPSPAETD 686
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 303/701 (43%), Positives = 381/701 (54%), Gaps = 91/701 (12%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F+P +LRVLLVE DDSTR IISALLR CGY+VAAV DGL AWETLK + IDLVLTEV
Sbjct: 8 FVPPTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEV 67
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+LPSISGF+LLT +M+H CKNIP+IMMS DS+S V K ML GA DFLIKPVRRNELRN
Sbjct: 68 DLPSISGFSLLTQIMDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRN 127
Query: 156 LWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKN-KGSEKVSD- 213
LWQHVWRR++ + PQN+ +K +ENN AS+HSS AS+ KN + SEK S+
Sbjct: 128 LWQHVWRRNTTI-TMPPQNITFPQNKLDVAAENNAASNHSSGSVASTHKNIECSEKNSEP 186
Query: 214 ------AQSSRTS-SPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETES 266
QS TS SP+ EA+S YM+NM Q+ K E ES
Sbjct: 187 HKLATLVQSIFTSTSPFSEADSKYMENM---------------------QDNSIKYERES 225
Query: 267 LMPESKTGGASDELIVSEKLNRSGSEVAQCDD---ALRLEEDYGCVKTMPQGEGEGPKND 323
+ TG EK S+ A CD LRL ++Y +T + E G +
Sbjct: 226 AEYKDVTG---------EKSTTIASKAAGCDKISTGLRLGQNYDYSETENRDEVLGTELS 276
Query: 324 RINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTK 383
+ + I IH N+EL + S+GAIDL+ TFD + + + + G T
Sbjct: 277 KAHPHINTKIHQSNNELEDHSAGAIDLMATFDKYPKNNHANCSFSGG----------NTA 326
Query: 384 KCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPT--PTSNSAEL 441
K +F ELSL++ P + +ER LNHS ASAFSWY +S PT +S E
Sbjct: 327 KFDFDTQFELSLQRDSPGSPPKPTTEERQILNHSNASAFSWYGSSMVLQPLFPTKSSHE- 385
Query: 442 KDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFI 501
S +LSEN +EN+T LV+GQS Q L F
Sbjct: 386 -----------SQKLSENINTTHH--YDGKKQKQENITYLVIGQSGQVDTKC---QLEFF 429
Query: 502 PVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDS 561
P G DN ++++ S+F +SG+ P W+P S QKE FP S S HSNP +S
Sbjct: 430 PATGATSDNKSMEHNNVLHSMFNAQSGMHPTWTPKSVFQKESSPFPTSISSHSNPKSQNS 489
Query: 562 EQVYGRTGEINHNSVDQT-VCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSS---S 617
E +H S D T C+QS + H SP+ QS S + ++N+S
Sbjct: 490 EP--------HHWSDDATYTCDQSNN---DFAMHESPSNGQSCTSFYHDAESHNASGVCE 538
Query: 618 GTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKD 677
G S D N+ S G + ++N HDG S+ +SQR+AALTKFRLKRKD
Sbjct: 539 GLGSVSDGNAPSTIV-GKNNLESSMNNDH---HDGLRDTSSHRTSQREAALTKFRLKRKD 594
Query: 678 RCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADG 718
RCYDKKVRY+SRK AE RPRVKGQFVRQV+ E A G
Sbjct: 595 RCYDKKVRYESRKRQAENRPRVKGQFVRQVQGEVPVAETRG 635
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 303/704 (43%), Positives = 395/704 (56%), Gaps = 98/704 (13%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RWE FLP+M+LRVLLVEADDSTRQII+ALLRKC Y+VAAVPDGL AWE LK RPH++DL+
Sbjct: 40 RWEKFLPKMILRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPHNVDLI 99
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEV+LPS+SG+ALLTL+MEH++CKNIPVIMMS DSIS V KCML+GAAD+L+KP+R+N
Sbjct: 100 LTEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKN 159
Query: 152 ELRNLWQHVWRRH-SLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKN-KGSE 209
ELRNLWQHVWRR S G + PQ+ K A +ENN AS+ SS AA Q+N + E
Sbjct: 160 ELRNLWQHVWRRQSSTTGINGPQDESVAQQKVEATAENNAASNRSSGDAACIQRNMELIE 219
Query: 210 KVSDAQSSRTSSPYLEAESA---YMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETES 266
K SDAQSS T P EAES + N+Q S LKC A + T+ ++ +L
Sbjct: 220 KGSDAQSSCT-KPDCEAESGPVDNIDNIQEFSPLKCGEAYPS-GTETQQVETSIRLGQTL 277
Query: 267 LMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRIN 326
+M S GG LN S + + +A + D P+ G G
Sbjct: 278 MMHASHAGG----------LNVS---ICKNGEASTTDAD-------PEHFGNG------- 310
Query: 327 ADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKC- 385
I+ H + + S AID IG F H + TL N T C
Sbjct: 311 --ISGEAHDNHYVQMNSSKEAIDFIGAFHTH----------------PICTLKNSTVNCT 352
Query: 386 ---EFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELK 442
+ SP L+LSLR+S PS+ ++ +ERHTL HS ASAF Y N + S A L
Sbjct: 353 GKFDLSPQLDLSLRRSRPSSFENELTEERHTLMHSNASAFKRYTNRQ---LQISTPAVLI 409
Query: 443 DGSSKSDEILSN---QLSENATGGFQPCCATSSNS--RENMTSLVMGQSEQAAVAFAGPH 497
+ S + + ++N +S ATG C + SS + + S QS++ +A +
Sbjct: 410 NFSDQQRQQIANCEKNISRIATG----CNSDSSTPSMQRCIVSPTTVQSKEPELATSHSQ 465
Query: 498 LGF---IPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHS 554
G IPV GVRF+++ Y +FPS+F +SG SPNS E + F ++A S
Sbjct: 466 PGHSLPIPVKGVRFNDLCTTYGSVFPSVFRAQSGSPAMPSPNSVMLLEPN-FQVNAFYQS 524
Query: 555 NPDVHDSEQVY---GRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGL 611
N SEQ+Y G G N + T ++ K E H SP +QS +S CNG
Sbjct: 525 NMKESSSEQLYEPGGPNGNTTQNHIVYT--QEHKSENAEDQGHISPTTDQSVSSSFCNGN 582
Query: 612 ANN-------SSSGTYSRIDR-NSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQ 663
A++ S+ G+ S +D+ N+ A + G D + ++ S Q
Sbjct: 583 ASHLNSIGYGSNCGSSSNVDQVNTVWAASEGKHK-------------DLTSNANSHRSIQ 629
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R+AAL KFRLKRK+RCY+KKVRY+SRK LAEQRPRVKGQFVRQV
Sbjct: 630 REAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQV 673
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 298/700 (42%), Positives = 402/700 (57%), Gaps = 71/700 (10%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RWE+FL RM LRVLL+EADDSTRQII ALLRKC YRV AVPDGL AWE L+ RPH+IDL+
Sbjct: 52 RWENFLRRMRLRVLLIEADDSTRQIIGALLRKCSYRVTAVPDGLKAWEILRGRPHNIDLI 111
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEV+LP+ISGFALLTL+ EH++CKNIPVIMMS DS+S V KCML+GAAD+L+KP+RRN
Sbjct: 112 LTEVDLPAISGFALLTLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRN 171
Query: 152 ELRNLWQHVWRRHSL-LGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGS-E 209
EL+NLWQHVWR+ S LG + PQ+ + A SENN AS S+ A Q+N E
Sbjct: 172 ELKNLWQHVWRKQSSNLGINDPQDESVAQQQLEATSENNAASKRSNGRMACIQRNTEQIE 231
Query: 210 KVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMP 269
K SD QSS T P +EAES ++NMQ SQ K + +D+ QN K E +
Sbjct: 232 KGSDEQSSCT-KPEVEAESVRVENMQEFSQPKW---GKSFPSDIISQN---KEEYLNFGQ 284
Query: 270 ESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADI 329
+ T G+ E GSEV C D T P G+ P++ +A I
Sbjct: 285 KFLTHGSEAE----------GSEVDTCKDD----------NTTPPGKDIRPESHNRDAII 324
Query: 330 TYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSP 389
T N L+ S AIDLIG+F N+ + ++ D + P
Sbjct: 325 TNEDFDNNYVLVNSSRKAIDLIGSFHNYPNCSSEGTSKFDSL-----------------P 367
Query: 390 HLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAEL----KDGS 445
L+LSLR+S S + +ER TL S ASAF+ Y N +A TP + A K+
Sbjct: 368 QLDLSLRRSHFSGFCNSYTEERRTLGTSNASAFTRYTN-RASQTPQTKIANACNHQKEYG 426
Query: 446 SKSDEILSNQLSENATGGFQPCCATSSN-SRENMTSLVMGQSEQAAVAFAGPHLGFIPVP 504
+ S+++LSN F C + + ++ ++ SL G S+++ VA + PVP
Sbjct: 427 TNSEQMLSNT--------FTSCSSDNPGITQRSIISLAAGHSKESEVATSCSQQKVFPVP 478
Query: 505 ----GVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHD 560
G+R +N++ G+ P +F T+SG P S NS Q+E F ++ S+ + ++
Sbjct: 479 IPVKGIRVNNLYTGFGSALPPMFCTQSGSSPTPSSNSVPQQEPS-FQMNILYQSSLENNN 537
Query: 561 SEQVYGRTGEINHNSVDQTVCEQS-KGRPLEQLRHGSPAGNQSSNSGLCN-GLANNSSSG 618
EQ G+ +++ +Q V +Q K PLE H S A +QS++S CN G+++++S G
Sbjct: 538 FEQQCDPHGQNTNDAANQNVYKQEHKLDPLEDRGHLSSATDQSASSSFCNGGVSHHNSIG 597
Query: 619 TYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDR 678
S NS+ + G P++ N + +G SA S QR+AAL KFRLKRK+R
Sbjct: 598 YGSGCGSNSNVDHVAFVGAAPESKNEEGFYPQNG----SAHRSFQREAALAKFRLKRKER 653
Query: 679 CYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADG 718
CY+KKVRY+SRK LAEQRPRVKGQFVRQV + + DG
Sbjct: 654 CYEKKVRYESRKKLAEQRPRVKGQFVRQVHIDPSPSEIDG 693
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 294/690 (42%), Positives = 386/690 (55%), Gaps = 77/690 (11%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RWE FLP+MVLRVLLVEADD TRQII+ALLRKC Y+VAAV DGL AWE LK RP SIDL+
Sbjct: 46 RWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLI 105
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEV+LP+ISG+ALLTL+MEHD+CK+IPVIMMS DS+S V KCML+GAAD+L+KP+R N
Sbjct: 106 LTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRIN 165
Query: 152 ELRNLWQHVWRRHS----LLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKG 207
ELRNLWQHVWRR + G + PQ+ D K A +ENN AS+ S AA Q+NK
Sbjct: 166 ELRNLWQHVWRRQTQSAATAGINGPQDESDTQQKFEATAENNAASNRSGGDAACIQRNKD 225
Query: 208 -SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETES 266
EK SDAQSS T P +EAES + NM SQLKC A + +++T
Sbjct: 226 LIEKGSDAQSSCT-RPNMEAESGLVDNMHEFSQLKCAEAYPS------------EIKTRE 272
Query: 267 LMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRI- 325
L + G A ++++ + G VA C++ + + +T +G +
Sbjct: 273 L--DIHLGQA----VIAQDSHAGGLSVANCNNGVASTNNCKNGETGANNCKDGDDQEHFR 326
Query: 326 NADITYGIHGCND-ELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKK 384
NA I+ +H + ++ + AIDLIG F + PN + K S++ + T K
Sbjct: 327 NASISGEVHDNHYVQIYSTTKEAIDLIGAFR---------TDPNCSL--KNSSI-DCTGK 374
Query: 385 CEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELKDG 444
+ SP L+LSLR S PS +ERHTL HS ASAF Y N + +P A + +
Sbjct: 375 FDHSPQLDLSLRSSHPSNFEKDLTEERHTLMHSNASAFKRYTNRQLQASP----AVVINF 430
Query: 445 SSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVP 504
S + E +N + N+ +S S + + L S+Q H IPV
Sbjct: 431 SDQPREQKTNNENHNSD--------SSIPSMQKESELATSHSQQR-------HSLPIPVK 475
Query: 505 GVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQV 564
GVRF+++ Y P F T+SG P P S E + F A SN ++SEQ+
Sbjct: 476 GVRFNDLCMAYGSTLPPGFRTQSG--PPSMPGSVVFLEQN-FQADAFYQSNVKQNNSEQL 532
Query: 565 YGRTGEINHNSVDQTVCEQS-KGRPLEQLRHGSPAGNQSSNSGLC-NGLANNSSSGTYSR 622
Y G +++ +Q + Q K E R SP +QS +S C NG A+N +S Y
Sbjct: 533 YEPRGPNGNSTPNQIMYTQEHKSEHPEDQRLISPTTDQSVSSSFCNNGNASNFNSIGY-- 590
Query: 623 IDRNSSSAKASGTGTVPQNLNGCTLFIHDGFN------GISARHSSQRDAALTKFRLKRK 676
+ +G V Q T + +G N G S R + R+AAL KFRLKRK
Sbjct: 591 ------GSNCGSSGNVEQVATFRTAAVSEGKNEELTNSGYSHR-AMLREAALNKFRLKRK 643
Query: 677 DRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+RCY+KKVRY+SRK LAEQRPRVKGQFVRQ
Sbjct: 644 ERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 673
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 275/681 (40%), Positives = 368/681 (54%), Gaps = 62/681 (9%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RWE LPRMVLRVLLVEADDSTRQII+ALLRKC Y+VAAVPDGL AWE LK +PH+IDL+
Sbjct: 34 RWEKLLPRMVLRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPHNIDLI 93
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEVELPSISG+ALLTL+MEH++CKNIPVIMMS DS+S V KCM++GAAD+L+KP+R+N
Sbjct: 94 LTEVELPSISGYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKN 153
Query: 152 ELRNLWQHVWRRHSLLG-GHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
ELRNLWQHVWRR S L + PQ A SENN S+HSS A Q NK EK
Sbjct: 154 ELRNLWQHVWRRQSSLARENCPQEESVGQDTAEATSENNPESNHSSGDVARLQNNKDFEK 213
Query: 211 VSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLE--TESLM 268
SD+QSS T P LEAESA + N++ ++ D R + A+++ + L+
Sbjct: 214 GSDSQSSCT-KPDLEAESAAVGNVR---EIFLPVWGPFILNDKTRHKDEARMDCGQKVLL 269
Query: 269 PESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINAD 328
E+ G GS VA C D+ M E P++ R NA
Sbjct: 270 HENDAG---------------GSAVAACKDS----------NQMIVNEDVEPESQRTNAK 304
Query: 329 ITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFS 388
ITY N + S AID +G H+ S+L N K +F
Sbjct: 305 ITYEACDHNYFFVNSSKEAIDFMGASAGHK-----------------SSLDNTKSKFDFV 347
Query: 389 PHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNS--KACPTPTSNSAELKDGSS 446
P L+L L + S Q ++ TL HS ASAF+ Y+N ++ T ++ K+ +
Sbjct: 348 PQLDLCLTRRHSSGFEIQVLEDTRTLRHSHASAFTRYSNRPLQSIHTTWASVPNQKEHGA 407
Query: 447 KSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGV 506
S+ + S N G ++ + SL GQ+E++ A + PV GV
Sbjct: 408 YSE----GKFSSNVGGYNSDVPGPPPSTARAIISLANGQTEESEKAISSTQQKVFPVNGV 463
Query: 507 RFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYG 566
F+N+ Y +F IF + SS + ++ N + +SE +Y
Sbjct: 464 GFNNLCTSYGSMFSPIFCKQQSGASPIPSPSSGSQPEPNCKVNPFRQFN-FISNSENLYD 522
Query: 567 RTGEINHNSVDQTVCEQSKG-RPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDR 625
+ +++ ++T+ +Q K P E H SP +QS+ S NG A++ + G S
Sbjct: 523 GLIQTANDTANRTLQKQDKELDPPEDRGHISPTTDQSATSSFYNGAASHLNMGYGSHSGS 582
Query: 626 NSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVR 685
NS+ + + + N + ++ S QR+AAL KFRLKRKDRCY+KKVR
Sbjct: 583 NSNVDQVANVRVAAERKNE-----ESTLHNANSHRSIQREAALNKFRLKRKDRCYEKKVR 637
Query: 686 YQSRKSLAEQRPRVKGQFVRQ 706
Y+SRK LAEQRPRVKGQFVRQ
Sbjct: 638 YESRKKLAEQRPRVKGQFVRQ 658
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 276/711 (38%), Positives = 356/711 (50%), Gaps = 83/711 (11%)
Query: 29 VRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSI 88
+ +WE FLP+M+LRVLLVEADDSTRQII+ALLRKC YRVAAVPDGL AWE LK RP ++
Sbjct: 48 IGIKWERFLPKMMLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNV 107
Query: 89 DLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
DL+L EVELPSISGFALLTL+M H+ CKNIPVIMMS DSIS V KCM+KGAAD+L+KP+
Sbjct: 108 DLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPL 167
Query: 149 RRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQK-NKG 207
RRNELRNLWQHVWRR + D+ K SEN AS+HS+ Y A Q+ NK
Sbjct: 168 RRNELRNLWQHVWRRQASSNVRA-----DIQEKVEVTSENETASNHSTGYVAGVQRNNKN 222
Query: 208 SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESL 267
EK SD QSS T + E + +N Q Q K D N +L
Sbjct: 223 IEKGSDTQSSCTKVDF-EPGNKIQENSQS-RQGKASPNDFKPQKDERHINLSQRL----F 276
Query: 268 MPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINA 327
M E++TGG + V+ L + G P ND +
Sbjct: 277 MHENETGGLAMSCYVNTDL------------------------PITLSMGLEPINDGRSP 312
Query: 328 DITYGIHGCNDELIEPSSGAIDLIGTFDNHQEV--PD---KLSTPNDGIPDKLSTLHNRT 382
+I D PS A T NH + PD K S N+ + +
Sbjct: 313 NIASEAGHDKDLFANPSRDA-----TASNHARIKYPDNYQKSSPSNNFAANNFGS----- 362
Query: 383 KKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSA--- 439
+ HL+LSLR+ P+ ++ + TL HS+ASAF+ Y +S+
Sbjct: 363 -----ALHLDLSLRRCQPNDFEERAAGQ-ATLKHSSASAFTRYTFRPLQSLQAKSSSICD 416
Query: 440 ELKDGSSKSDEILS-NQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHL 498
E K+ S D + S S + T P SS S +TS QS Q+ VA +
Sbjct: 417 EQKETESNPDHVGSMGATSTSDTINPTPNLQKSSTSMPMITS----QSTQSEVAKSSTSE 472
Query: 499 GFIP--VPGVRF--DNIFAGYSH-IFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVH 553
IP V G +N +G H PS + P+ +S F
Sbjct: 473 TAIPLQVSGTDLMSNNQRSGSGHGSLPSHNFCAQLGSPSSPCRTSVTHPELIFGKQTVYP 532
Query: 554 SNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLAN 613
N + H EQ + ++ + + ++ G+ E H SP + S+NS +C G
Sbjct: 533 LNLENHKLEQFLNQHRILSSPASRKI---ENSGQSPENQGHISPTTDHSANSNVCRGNTT 589
Query: 614 NSSSGTY-SRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFR 672
+ S Y S NS+ + ++ N LF G + SSQR+AALTKFR
Sbjct: 590 HVGSLGYPSPCGSNSNVDRVGIARVTSESRNEEALFSQGG----DSYRSSQREAALTKFR 645
Query: 673 LKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN-----ETKDANADG 718
LKRKDRCY+KKVRY+SRK LAEQRPRVKGQFVR+V ET D ++G
Sbjct: 646 LKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRRVLTDPLPAETNDNTSNG 696
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 275/711 (38%), Positives = 355/711 (49%), Gaps = 83/711 (11%)
Query: 29 VRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSI 88
+ +WE FLP+M+LRVLLVEADDSTRQII+ALLRKC YRVAAVPDGL AWE LK RP ++
Sbjct: 48 IGIKWERFLPKMMLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNV 107
Query: 89 DLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
DL+L EVELPSISGFALLTL+M H+ CKNIPVIMMS DSIS V KCM+KGAAD+L+KP+
Sbjct: 108 DLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPL 167
Query: 149 RRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQK-NKG 207
RRNELRNLWQHVWRR + D+ K SEN AS+HS+ Y A Q+ NK
Sbjct: 168 RRNELRNLWQHVWRRQASSNVRA-----DIQEKVEVTSENETASNHSTGYVAGVQRNNKN 222
Query: 208 SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESL 267
EK SD QSS T + E + +N Q Q K D N +L
Sbjct: 223 IEKGSDTQSSCTKVDF-EPGNKIQENSQS-RQGKASPNDFKPQKDERHINLSQRL----F 276
Query: 268 MPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINA 327
M E++TGG + V+ L + G P ND +
Sbjct: 277 MHENETGGLAMSCYVNTDL------------------------PITLSMGLEPINDGRSP 312
Query: 328 DITYGIHGCNDELIEPSSGAIDLIGTFDNHQEV--PD---KLSTPNDGIPDKLSTLHNRT 382
+I D PS A T NH + PD K S N+ + +
Sbjct: 313 NIASEAGHDKDLFANPSRDA-----TASNHARIKYPDNYQKSSPSNNFAANNFGS----- 362
Query: 383 KKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSA--- 439
+ HL+LSLR+ P+ ++ + TL HS+ASAF+ Y +S+
Sbjct: 363 -----ALHLDLSLRRCQPNDFEERAAGQ-ATLKHSSASAFTRYTFRPLQSLQAKSSSICD 416
Query: 440 ELKDGSSKSDEILS-NQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHL 498
E K+ S D + S S + T P SS S +TS QS Q+ VA +
Sbjct: 417 EQKETESNPDHVGSMGATSTSDTINPTPNLQKSSTSMPMITS----QSTQSEVAKSSTSE 472
Query: 499 GFIP--VPGVRF--DNIFAGYSH-IFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVH 553
IP V G +N +G H PS + P+ +S F
Sbjct: 473 TAIPLQVSGTDLMSNNQRSGSGHGSLPSHNFCAQLGSPSSPCRTSVTHPELIFGKQTVYP 532
Query: 554 SNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLAN 613
N + H EQ + ++ + + ++ G+ E H SP + S+NS + G
Sbjct: 533 LNLENHKLEQFLNQHRILSSPASRKI---ENSGQSPENQGHISPTTDHSANSNVWRGNTT 589
Query: 614 NSSSGTY-SRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFR 672
+ S Y S NS+ + ++ N LF G + SSQR+AALTKFR
Sbjct: 590 HVGSLGYPSPCGSNSNVDRVGIARVTSESRNEEALFSQGG----DSYRSSQREAALTKFR 645
Query: 673 LKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN-----ETKDANADG 718
LKRKDRCY+KKVRY+SRK LAEQRPRVKGQFVR+V ET D ++G
Sbjct: 646 LKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRRVLTDPLPAETNDNTSNG 696
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 247/681 (36%), Positives = 334/681 (49%), Gaps = 101/681 (14%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
+R LPRM +RVLL E DDSTR II ALLRKCGYRVAA DG+ AW+ LK + +IDL
Sbjct: 32 SRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDL 91
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
VLTEVELP +SGF LL+ +MEHD CKNIPVIMMS +DS+SMV KCMLKGAADFL+KP+R+
Sbjct: 92 VLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRK 151
Query: 151 NELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
NELRNLWQHVWR+ G + DV H E+N+ H + +E
Sbjct: 152 NELRNLWQHVWRKQLSSG------VLDVQHTQ---QEDNLTERHEQKTGVTK-----AEH 197
Query: 211 VSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPE 270
V+ E+ +NM+ Q + + Q+ C + E E+
Sbjct: 198 VT--------------ENVVHKNMECSEQ------------ESDAQSSCTRSELEA---- 227
Query: 271 SKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADIT 330
+ ++ L + + R S+ D E++ G T +G R D +
Sbjct: 228 -DSRQTNNLLEYKQPMGRHFSK----PDHKNTEKNGG---TKIHASNDGNLIPRREEDAS 279
Query: 331 YGIHGC-NDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNR--TKKCEF 387
C ND E +S ++L+ DN Q+ N + ++ ++R KC
Sbjct: 280 LRRMTCSNDINCEKASRDMELVHIIDNQQK-------NNTHMEMDVARANSRGNDDKCFS 332
Query: 388 SP--HLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELKDGS 445
P LELSLR+S S Q +ER TLNHS +S FS YN A T + A+ S
Sbjct: 333 IPAHQLELSLRRSDYSRLESQEKNERRTLNHSTSSPFSLYNCRTASSTINAGDAQACSTS 392
Query: 446 SKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPG 505
+ ++ EN G + S + RE Q V F +PV G
Sbjct: 393 ATHIDL------ENKNGDSK---TPSQDKRET------NQPPIRVVPFP------VPVGG 431
Query: 506 VRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVY 565
+ FD S+FY +S P W+ +S ++ IS + P D++QV
Sbjct: 432 LTFDGQPFWNGAPVASLFYPQSA-PPIWNSKTSTWQDATTQAISLQ-QNGPKDTDTKQVE 489
Query: 566 GRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDR 625
+ + + P ++ RH SP +S +S + + A + SG+
Sbjct: 490 NVEEQTARSHLSANRKHLRIEIPTDEPRHVSPTTGESGSSTVLDS-ARKTLSGSVCDSSS 548
Query: 626 NSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVR 685
N A + VP+N +G RH SQR+AAL KFRLKRKDRC++KKVR
Sbjct: 549 NHMIAPTESSNVVPENPDGL-------------RHLSQREAALNKFRLKRKDRCFEKKVR 595
Query: 686 YQSRKSLAEQRPRVKGQFVRQ 706
YQSRK LAEQRPRVKGQFVRQ
Sbjct: 596 YQSRKLLAEQRPRVKGQFVRQ 616
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 204/442 (46%), Positives = 256/442 (57%), Gaps = 50/442 (11%)
Query: 3 MGEVVVSSEGGMDIDLE----TEKDGSSEVV-RTRWESFLPRMVLRVLLVEADDSTRQII 57
MGE+V S E + ++ E TE G EV RWE FLP+MVLRVLLVEADD TRQII
Sbjct: 1 MGEIVASGERLVRVEEEEESGTETRGGGEVKGLLRWEKFLPKMVLRVLLVEADDCTRQII 60
Query: 58 SALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKN 117
+ALLRKC Y+VAAV DGL AWE LK RP + DL+LTEV+LPS+SG+ALL+L+MEHD CK
Sbjct: 61 TALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVSGYALLSLIMEHDTCKT 120
Query: 118 IPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHS----LLGGHVPQ 173
IPVIMMS DS+S V KCML+GAAD+L+KP+R NELRNLWQHVWRR S G + PQ
Sbjct: 121 IPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSQSTATAGINGPQ 180
Query: 174 NLHDVYHKGGAISENNMASSHSSDYAASSQKNKG-SEKVSDAQSSRTSSPYLEAESAYMQ 232
+ D K A +ENN AS+ SS AA Q+NK EK SDAQSS T P +EAES +
Sbjct: 181 DEIDALQKVEATAENNAASNRSSGDAACIQRNKDLIEKGSDAQSSCT-KPNMEAESGLVD 239
Query: 233 NMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKTGGASDELIVSEKLNRSGSE 292
NMQ +QLKC A C ++++ Q +L ++L+ + GA +S +++G
Sbjct: 240 NMQEFTQLKCAEA---CPSELKTQEFDIRL-GQTLITQDSHAGA-----LSMANHKNGET 290
Query: 293 VAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSSGAIDLIG 352
+ +E + T GE N + I + AIDLIG
Sbjct: 291 STNNGKDVDDQEHFRIAST----SGEVHDNHYVQ--------------INSTKEAIDLIG 332
Query: 353 TFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQGNDERH 412
F H L P+ DKL SP L+LSLR S PS + +ER+
Sbjct: 333 AFRTHPNC--SLKKPSIDWTDKLDN----------SPQLDLSLRSSHPSNIEKELTEERN 380
Query: 413 TLNHSAASAFSWYNNSKACPTP 434
TL HS ASAF Y N + +P
Sbjct: 381 TLMHSNASAFKRYTNRQLQASP 402
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/44 (86%), Positives = 42/44 (95%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R+AAL KFRLKRK+RCY+KKVRY+SRK LAEQRPRVKGQFVRQV
Sbjct: 440 REAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQV 483
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 260/694 (37%), Positives = 333/694 (47%), Gaps = 131/694 (18%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
LPRM +RVLL E DDSTR +ISALLRKCGYRVAA DG+ AW+ LK + +IDLVLTEV
Sbjct: 38 MLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEV 97
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
ELP +SGF LL+ +MEHD KNIPVIMMS HDS+SMV KCMLKGAADFL+KP+R+NELRN
Sbjct: 98 ELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNELRN 157
Query: 156 LWQHVWRRHSLLGGHVPQNLHD------VYHKGGAISENNMASSHSSDYAASSQKNKG-S 208
LWQHVWR+ GG Q++ + + K G +N+ S +KN+ S
Sbjct: 158 LWQHVWRKQLANGGPDVQHIQEENLAERMEQKTGVTKADNLNSD-------GPRKNRECS 210
Query: 209 EKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLM 268
E+ SDAQSS T S LEAES N+ Q R S D+E L
Sbjct: 211 EQESDAQSSCTRS-ELEAESKQTNNILEYMQSTERHLSIRSHKDLE------------LN 257
Query: 269 PESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINAD 328
E+KT + LI + ED D
Sbjct: 258 GETKTRTKGNNLIPT-------------------RED----------------------D 276
Query: 329 ITYGIHGC-NDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEF 387
++ C ND E +S ++L+ DN Q K T D D + T +
Sbjct: 277 LSPKKRTCLNDNNSERTSRDMELVHIMDNQQ----KHDTQRDV--DTMRTTSRGNDENSI 330
Query: 388 SPH-LELSLRKS-FPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELKDGS 445
H LELSLR++ + N + ND R TLNHS +SAF YN A + +L
Sbjct: 331 PAHQLELSLRRTDYGKLENHEKND-RRTLNHSTSSAFYLYNCRTASSLVNAGDGQL---C 386
Query: 446 SKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAG-PHLGFIPVP 504
S S+ ++ EN G ++ + +V F G P PV
Sbjct: 387 STSETLVD---VENRNGDLAALSEDTTETNRPPIRVVPFPVPVQCFTFDGQPFWNGTPVA 443
Query: 505 GVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSH-----QKEHHRFPISASVHSNPDVH 559
Y P I+ K+ P W ++ QK PI + + P +
Sbjct: 444 S-------PFYPQSAPPIWNIKT---PTWQESTPQATSLPQKSQQNEPI--EMDAKPVEN 491
Query: 560 DSEQ-VYG---RTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANN- 614
EQ V G +G+ H + P + LRH SP +S S + + N
Sbjct: 492 AEEQFVVGPPSASGKQLHVEI-----------PKDDLRHISPVTGESGISTVLDSTRNTL 540
Query: 615 SSSGTYSRIDRNSSSAKASGTGT--VPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFR 672
SSSG S ++ ++S + S VP+ L RH SQR+AAL KFR
Sbjct: 541 SSSGCDSTSNQITASTEPSSNVYRGVPETARAEGL-----------RHLSQREAALNKFR 589
Query: 673 LKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
LKRKDRC++KKVRYQSRK LAEQRPRVKGQFVRQ
Sbjct: 590 LKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 623
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 192/408 (47%), Positives = 240/408 (58%), Gaps = 45/408 (11%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RWE FLP+MVLRVLLVEADD TRQII+ALLRKC Y+VAAV DGL AWE LK RP + DL+
Sbjct: 10 RWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLI 69
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEV+LPS+SG+ALL+L+MEHD CK IPVIMMS DS+S V KCML+GAAD+L+KP+R N
Sbjct: 70 LTEVDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRIN 129
Query: 152 ELRNLWQHVWRRHS----LLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKG 207
ELRNLWQHVWRR S G + PQ+ D K A +ENN AS+ SS AA Q+NK
Sbjct: 130 ELRNLWQHVWRRQSQSTATAGINGPQDEIDALQKVEATAENNAASNRSSGDAACIQRNKD 189
Query: 208 -SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETES 266
EK SDAQSS T P +EAES + NMQ +QLKC A C ++++ Q +L ++
Sbjct: 190 LIEKGSDAQSSCT-KPNMEAESGLVDNMQEFTQLKCAEA---CPSELKTQEFDIRL-GQT 244
Query: 267 LMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRIN 326
L+ + GA +S +++G + +E + T GE N +
Sbjct: 245 LITQDSHAGA-----LSMANHKNGETSTNNGKDVDDQEHFRIAST----SGEVHDNHYVQ 295
Query: 327 ADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCE 386
I + AIDLIG F H L P+ DKL
Sbjct: 296 --------------INSTKEAIDLIGAFRTHPNC--SLKKPSIDWTDKLDN--------- 330
Query: 387 FSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTP 434
SP L+LSLR S PS + +ER+TL HS ASAF Y N + +P
Sbjct: 331 -SPQLDLSLRSSHPSNIEKELTEERNTLMHSNASAFKRYTNRQLQASP 377
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/44 (86%), Positives = 42/44 (95%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R+AAL KFRLKRK+RCY+KKVRY+SRK LAEQRPRVKGQFVRQV
Sbjct: 415 REAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQV 458
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 253/687 (36%), Positives = 332/687 (48%), Gaps = 117/687 (17%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
LPRM +RVLL E DDSTR +ISALLRKCGYRVAA DG+ AW+ LK + ++DLVLTEV
Sbjct: 37 MLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLLKEKSFNVDLVLTEV 96
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
ELP +SGF LL+ +MEHD KNIPVIMMS HDS+SMV KCMLKGAADFL+KP+R+NELRN
Sbjct: 97 ELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPIRKNELRN 156
Query: 156 LWQHVWRRHSLLGG----HV--PQNLHD-VYHKGGAISENNMASSHSSDYAASSQKNKGS 208
LWQHVWR+ GG H+ +NL + + K G +N+ D + + S
Sbjct: 157 LWQHVWRKQLANGGPNVQHIQREENLAERIQQKTGVTKSDNL------DRDVPCKNRECS 210
Query: 209 EKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMER--QNECAKLETES 266
E+ SDAQSS T S LEAES N+ Q R S ++E Q + + E +
Sbjct: 211 EQESDAQSSCTRS-ELEAESKQTDNILEYKQSTQRHLSIPSHKNVELNGQTKIQRAEGNN 269
Query: 267 LMPESKTGGASDELIVSEK--LNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDR 324
L+P D+L ++ LN + SE R D V M E + N +
Sbjct: 270 LIP-----AREDDLSPKKRTCLNENNSE--------RASRDMELVHIM---ENQQKYNTQ 313
Query: 325 INADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKK 384
D NDE G+ HQ
Sbjct: 314 WEVDTMRTTSRGNDEK-----------GSIPAHQ-------------------------- 336
Query: 385 CEFSPHLELSLRKS-FPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELKD 443
LELSLR++ + N + ND R TLNHS +SAFS Y N +A PT N+ D
Sbjct: 337 ------LELSLRRTDYGKLENHEKND-RRTLNHSTSSAFSLY-NCRAVPT-LGNAG---D 384
Query: 444 GS-SKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAG-PHLGFI 501
G + E L + ++N T +N V Q + F G P
Sbjct: 385 GQLCSTSETLVDVENKNGDSADPSQDMTETNRPPIRVVPVPVQ----GLTFDGQPFWNGT 440
Query: 502 PVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSH--QKEHHRFPISASVHSNPDVH 559
PV ++F YS P I+ +K+ + +P ++ QK P + + P ++
Sbjct: 441 PVA-----SLF--YSQSTPPIWNSKTSMWQESTPQATSLPQKSPQNEP--NEMGAKPVIN 491
Query: 560 DSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGT 619
EQ + + + + RH SP +S S + + N SS
Sbjct: 492 AGEQFAMGPPSASGKQLHVEILN-------DDPRHISPMTGESGISTVLDSTRNTLSSSG 544
Query: 620 YSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRC 679
I S T P + + + + +RH SQR+AAL KFRLKRKDRC
Sbjct: 545 CDSI---------SNQITAPTESSNVYKDVPETPSAEGSRHLSQREAALNKFRLKRKDRC 595
Query: 680 YDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
++KKVRYQSRK LAEQRPRVKGQFVRQ
Sbjct: 596 FEKKVRYQSRKLLAEQRPRVKGQFVRQ 622
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 240/706 (33%), Positives = 343/706 (48%), Gaps = 119/706 (16%)
Query: 16 IDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGL 75
+++E + + E +R LP M +RVLL E DDSTR +ISALLRKCGY VAA DG+
Sbjct: 18 VNVEDQGETGQEALRA-----LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVAAASDGV 72
Query: 76 AAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKC 135
AWE LK + +IDLVLTEVELP++SGF LL+ +MEH+ CKNIPVIMMS +D++SMV KC
Sbjct: 73 KAWEILKEKSFNIDLVLTEVELPAMSGFLLLSTIMEHEACKNIPVIMMSSNDAVSMVFKC 132
Query: 136 MLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHS 195
MLKGAADFL+KP+R+NELRNLWQHVWR+ GG V + + + +
Sbjct: 133 MLKGAADFLVKPIRKNELRNLWQHVWRKQLSNGGLVQHTQQEDKLTEWQGQKTGVTKAEH 192
Query: 196 SDYAASSQKNKGSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMER 255
+ ++ + SE+ SDAQSS T S +EAES + N Q+ S+D++
Sbjct: 193 LIENVAHKRKECSEQESDAQSSCTRS-EVEAESKHTNNFLEFKQI----TGKYLSSDLKS 247
Query: 256 QNECAKLETESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQG 315
+ + +T+++ D LI
Sbjct: 248 TEDNGQTKTQTIR--------DDNLI---------------------------------- 265
Query: 316 EGEGPKNDRINADITYGIHGC-NDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDK 374
P+ +R D++ C D + ++ I+++ D+ Q+ S +
Sbjct: 266 ----PRRER---DLSPRKQPCLKDNDCQKATREIEVVHIIDDEQK-----SNAQTDVDVM 313
Query: 375 LSTLHNRTKKCEFSPHLEL--SLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACP 432
+T H K P +L SLR+S S +DQ +++ TLNHS +SAFS YN A
Sbjct: 314 RTTFHGNCDKGFSIPAHQLELSLRRSDYSKLDDQEKNDKRTLNHSTSSAFSLYNCRTASS 373
Query: 433 TPTSNSAELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVA 492
+ A L S+ ++ E TG S+ Q + A+
Sbjct: 374 CGNAGDAHLCSTSATHVDL------EMKTGD----------------SVAPSQDKTDAIC 411
Query: 493 FAGPHLGF-IPVPGVRFD-NIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISA 550
+ F +PV G+ F+ F + + P + Y +SG P W+ +S K+ I +
Sbjct: 412 PPIRVVPFPVPVAGLTFNGQPFWSGAPVAP-LLYPQSG-PPIWNSKTSTSKQAAAQAILS 469
Query: 551 S---VHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGL 607
SN V DS+Q G+ + + P + +H SP S +S +
Sbjct: 470 QQKWQQSNATVMDSDQAEITQGQEVLPAPNANEKHLHVEIPSDDPQHVSPMTGDSGSSTV 529
Query: 608 CNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGI-------SARH 660
N + N+ SG S S + + L+ C + FNG+ H
Sbjct: 530 LNN-SGNAPSG----------SGCDSSSNRIVAPLDPC-----NSFNGVPENPSMDGTHH 573
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
SQR+ AL KFRLKRK+RC++KKVRYQSRK LAEQRPRVKGQFVRQ
Sbjct: 574 LSQREVALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 619
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 244/722 (33%), Positives = 351/722 (48%), Gaps = 98/722 (13%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RW+ LPR LRVLLVE DDSTRQ+++ALLRKCGYRVAAV DG+ AWE ++ R ++ DLV
Sbjct: 28 RWDEILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLV 87
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEV +P++SG LL+ ++ D CKNIPVIMMS DSI VLKCM GA DFL+KPVR+N
Sbjct: 88 LTEVNMPTLSGIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKN 147
Query: 152 ELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSH-SSDYAASSQKNKGSEK 210
ELRNLWQHVWRRHS+ + SENN AS+H S + S+ + S++
Sbjct: 148 ELRNLWQHVWRRHSM-------------NSQLNASENNAASNHISVNSGTGSKTGENSDE 194
Query: 211 VSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPE 270
SDAQSS + E E +Q + +L N S+ E + + + +
Sbjct: 195 ESDAQSSGSKR---ETE------IQSVEKLPETVTHNVASSPRELKVQNGPFDRMNTKAP 245
Query: 271 SKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADIT 330
+ G +D+ S +V + +R + +G T + G+ N AD +
Sbjct: 246 ALKG--TDDAPSGNACGASKPQVFSAEKNVRSKYLHGI--TSAKVAGQIMDNAMRIADAS 301
Query: 331 YGIHGCNDELIEPSSGAIDLIGTFD--NHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFS 388
C PS DL+ T ++ ++ N P +TL +K
Sbjct: 302 ----SC-----RPSDLGKDLMATAQPTTSKKCKSPITMNNAVKPVMKNTLREDSKGTAID 352
Query: 389 -PHLELSLRKSFPSTSN-DQGNDERHTLNHSAASAFSWYNNSKACPTPTSNS-------- 438
P L+++L K S + +Q ++ NHS +SAFS Y N + P+ S
Sbjct: 353 HPSLDVNLGKQQRSDGHVNQELRDKDNFNHSNSSAFSRYGNKRIEPSAKQLSLPSVHLTY 412
Query: 439 -AELKDGSSKSDEILSNQLSENATGGFQ-----------PCCATSSNSRENMTSLVMGQS 486
+ D + +S +L + Q P +S+++RE+ + S
Sbjct: 413 QESVNDKNVQSSGVLPSHEHHTCKITMQAQAPLDSCTEGPAIPSSTSAREDAGT---SSS 469
Query: 487 EQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTK--------SGLQPAWSPNSS 538
F P GFIPVP I YS I P I+YT+ SG+ ++
Sbjct: 470 SPRKDNFGHPPYGFIPVPIPVGAAIPYHYSAIMPPIYYTQPPFMQCDPSGINQMGIQHAY 529
Query: 539 HQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPA 598
H H S P D + ++H+ + + ++S G P++ LR +
Sbjct: 530 HSSYHQNL-------SKPSEIDEHRQLEENQRLHHS---RQILQES-GEPIDLLRAHAEH 578
Query: 599 GNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISA 658
NQS++ C+ + + + N+ A SG + QN G+NG+ +
Sbjct: 579 NNQSAS---CSQDIRGWTVSGETDTNTNTVIAPESGNESGIQNF---------GYNGLDS 626
Query: 659 RHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ---VKNETKDAN 715
S +R+AAL KFR+KRKDRC++KKVRY SRK LAEQRPR+KGQFV Q T+DA
Sbjct: 627 DRS-RREAALMKFRMKRKDRCFEKKVRYHSRKKLAEQRPRIKGQFVSQKLKSATTTEDAE 685
Query: 716 AD 717
D
Sbjct: 686 TD 687
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 245/725 (33%), Positives = 340/725 (46%), Gaps = 134/725 (18%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
RW+ LPR LRVLLVE DDSTRQ+++ALLRKCGYRVAAV DG+ AWE ++ R ++ DL
Sbjct: 44 VRWDQILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDL 103
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
VLTEV +PS+SG LL+ ++ D CKNIPVIMMS DSI VLKCM KGA DFL+KPVR+
Sbjct: 104 VLTEVAMPSLSGIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRK 163
Query: 151 NELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSH-SSDYAASSQKNKGSE 209
NELRNLWQHVWRRH++ + G SENN AS+H S++ A S+ + S+
Sbjct: 164 NELRNLWQHVWRRHAM----------NCQTNG---SENNAASNHISANVANGSKTGENSD 210
Query: 210 KVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTC--STDMERQNECAKLETESL 267
+ SDAQS + +Q+++ L ++ R S E QN+ + +
Sbjct: 211 EESDAQS------FGSKRETEIQSVEKLPDIR-RDEDEVAGSSKKTESQNKSYDVRVNTK 263
Query: 268 MPESK-TGGA---SDELIVSEKLNR-SGSEVAQ--CDDALRLEEDYGCVKTMPQGEGEGP 320
+ SK + GA S++ + S+ LN + ++VA+ D+ALR+ + P G+
Sbjct: 264 VDASKDSDGAPSGSEKNVHSKCLNGITSAKVAEQIMDNALRITD---ASSRRPSNLGKDL 320
Query: 321 KNDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLH- 379
AD C ++E ++ + +G + S P+ + L H
Sbjct: 321 AMTEPEAD-----RKCQSSVMENNAVTENNLGVKSKGAAICPADSCPSQFLETNLGKQHH 375
Query: 380 -NRTKKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNS 438
N K EF E+ NHS +SAFS Y N + P S
Sbjct: 376 LNGYKNQEFR---------------------EKDIFNHSNSSAFSRYGNKRIEP-----S 409
Query: 439 AELKDGSSKSDEILSNQLSENATGGFQPCCA--------TSSNSRENMTSL--------V 482
E++ S I + FQP T ++R+ +L +
Sbjct: 410 GEIQFFPSLC--ITGQEHVHGKDPVFQPNGVLLPPNEHNTGESTRQTRITLDSSPEGAAI 467
Query: 483 MGQS---EQAAV--------AFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTK----- 526
M S E A V + + P GFIPVP + Y I ++Y +
Sbjct: 468 MCSSSAREDAGVSSSSHRKDSMSHPSYGFIPVPIPVGPGMPYHYGAILQPVYYPQGPLMH 527
Query: 527 ---SGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQ 583
+G+ A + S Q +H P S D E + E NH +
Sbjct: 528 CDSAGINKAAIQHGSGQSNYHEAPGKPS-------QDDEH---KQSEENHQLHHSRQILR 577
Query: 584 SKGRPLEQLRHGSPAGNQSS--NSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQN 641
G P+E R NQS+ + +C G + +G+G N
Sbjct: 578 ESGEPIEMARAHMDRANQSASCSQDICKG-------------------SGCTGSGEADIN 618
Query: 642 LNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKG 701
N +GI S+R+AAL KFR+KRKDRC++KKVRY SRK LAEQRPRVKG
Sbjct: 619 ANTMVALESGNESGIQNGDRSRREAALMKFRMKRKDRCFEKKVRYHSRKKLAEQRPRVKG 678
Query: 702 QFVRQ 706
QFV Q
Sbjct: 679 QFVSQ 683
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/254 (61%), Positives = 182/254 (71%), Gaps = 12/254 (4%)
Query: 3 MGEVVVSSEGGMDIDLE-TEKD---GSSEVV-----RTRWESFLPRMVLRVLLVEADDST 53
MGEVV+ S + +E EK+ GS RWE FLP+MVLRVLLVEADDST
Sbjct: 1 MGEVVIMSGEKKSVRVEGVEKEDSGGSGSKAGEFKGLMRWEKFLPKMVLRVLLVEADDST 60
Query: 54 RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHD 113
RQII+ALLRKC Y+V AVPDGL AWE LK RPH++DL+LTEV+LPSISG+ALLTL+MEH+
Sbjct: 61 RQIIAALLRKCSYKVVAVPDGLKAWELLKGRPHNVDLILTEVDLPSISGYALLTLIMEHE 120
Query: 114 VCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRH-SLLGGHVP 172
+CKNIPVIMMS DSIS V KCML+GAAD+L+KP+R+NELRNLWQHVWRR S G +
Sbjct: 121 ICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVWRRQSSTTGINGL 180
Query: 173 QNLHDVYHKGGAISENNMASSHSSDYAASSQKN-KGSEKVSDAQSSRTSSPYLEAESAYM 231
Q+ K A +ENN AS+ SS AA Q+N + EK SDAQSS T P EAES +
Sbjct: 181 QDESVAQQKVEATAENNAASNRSSGDAACIQRNIELIEKGSDAQSSCT-KPDCEAESDPV 239
Query: 232 QNMQGLSQLKCRSA 245
NMQ S LKC A
Sbjct: 240 GNMQEFSLLKCGEA 253
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 190/360 (52%), Gaps = 47/360 (13%)
Query: 380 NRTKKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSA 439
N T + SP L+LSLR+S P + ++ +ERHTL HS ASAF Y + S A
Sbjct: 314 NCTGNFDHSPQLDLSLRRSCPGSFENKLTEERHTLMHSNASAFKRYTTRQ---LQISMPA 370
Query: 440 ELKDGSSKSDEILSN---QLSENATGGFQPCCATSSNSRENMTSLVMG----QSEQAAVA 492
L + S + E ++N +S ATG ++S+S M ++ QS+++ +A
Sbjct: 371 VLINFSDQQREQITNCEKNISHIATG-------SNSDSSTPMQRCIVSPTTVQSKESELA 423
Query: 493 FAGPHLGF---IPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPIS 549
+ P G IPV GVRF+++ Y + PS+F+T+SG SPNS E + F ++
Sbjct: 424 TSHPPQGHSLPIPVKGVRFNDLCTAYGSVLPSVFHTQSGPPAMPSPNSVVLLEPN-FQVN 482
Query: 550 ASVHSNPDVHDSEQVY---GRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSG 606
A SN SEQ+Y G G N + T ++ K E H SP +QS +S
Sbjct: 483 AFYQSNMKESSSEQLYESRGPNGNTTQNHIVYT--QEHKSEHAEDRGHISPTTDQSVSSS 540
Query: 607 LCNGLANN-------SSSGTYSRIDR-NSSSAKASGTGTVPQNLNGCTLFIHDGFNGISA 658
CNG A++ S+ G+ S +D+ N+ A + G D N ++
Sbjct: 541 FCNGNASHLNSIGYGSNCGSSSNVDQVNTVWAASEGKH-------------EDLTNNANS 587
Query: 659 RHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADG 718
S QR+AAL KFRLKRK+RCY+KKVRY+SRK LAEQRPRVKGQFVRQV + A DG
Sbjct: 588 HRSIQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHPDPLVAEKDG 647
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 246/728 (33%), Positives = 337/728 (46%), Gaps = 125/728 (17%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RW+ LPR LRVLLVE DDSTRQ+++ALLRKCGYRVAAV DG+ AWE ++ R ++ DLV
Sbjct: 8 RWDEILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLV 67
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEV++P++SG LL ++ CKNIPVIMMS DSI VL+CM GA DFL+KPVR+N
Sbjct: 68 LTEVDMPTLSGIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKN 127
Query: 152 ELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSH-SSDYAASSQKNKGSEK 210
ELRNLWQHVWRRHS+ + SENN AS+H S++ S+ S++
Sbjct: 128 ELRNLWQHVWRRHSM-------------NTQTNASENNAASNHISANSGNRSKTGDNSDE 174
Query: 211 VSDAQSS----RTSSPYLE----------AESAYMQNMQG--LSQLKCRSASNTCSTDME 254
SDAQSS T +E A S+ +Q ++ ++ + + D
Sbjct: 175 ESDAQSSGSKRETEIQSVEKLPETVTENGASSSRELTIQNGPFDRVTTKAHAFNINVDPP 234
Query: 255 RQNECAKLETESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQ 314
N C E + E K I S K+ +G + D+ALR+ + C T P
Sbjct: 235 SGNVCETGELQVFSAEKKLRSKCLNGITSAKV--AGQIM---DNALRIADASSCRPTDPG 289
Query: 315 GEGEGPKNDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDK 374
K+ A T G G N IE S A++ P
Sbjct: 290 ------KDLLAAAPSTAGKKG-NSPAIENS--AVN----------------------PAM 318
Query: 375 LSTLHNRTK-----KCEFSP--HLELSLRKSFPSTSNDQGNDE---RHTLNHSAASAFSW 424
+T H R+K + E P LE++L K SN N E + HS +SAFS
Sbjct: 319 ENTPHERSKGTAIGRAESCPPRSLEINLEKQPLFNSNGYANQEFKDKDNFRHSNSSAFSR 378
Query: 425 YNNSKACPT---------------PTSNSAELKDGSSKSDEILSNQLSENATGGFQPCCA 469
Y N + + P + G+ S E + + + A C
Sbjct: 379 YGNKRIESSVQQLFPPSLHLSHHEPVCDKNIQPGGALSSREHNTWKSAVQAKVPLDSCTE 438
Query: 470 -----TSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFY 524
+SS++RE+ S P GFIPVP I Y I I+Y
Sbjct: 439 RVAILSSSSAREDAGP---SSSSPRTEILNHPPYGFIPVPIPVGAAIPYHYGAIMQPIYY 495
Query: 525 TKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGE-INHNSVDQTVCEQ 583
++ P++ +Q AS HSN Q G+ E + H +++
Sbjct: 496 PQAPFM-QHDPSAINQMAIQH----ASFHSN-----YHQSLGKPSEVVEHRQLEENQLLH 545
Query: 584 SKGRPLEQLRHGSPAG-----NQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTV 638
R + LR P N + ++ L S D N+++ A +G
Sbjct: 546 HHSRKI--LRESEPIDLSRPENANPSTSCSQDLRRGSGWTVSGETDMNTNTIIAMESG-- 601
Query: 639 PQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPR 698
N +G F ++G + +R R+AAL KFR+KRKDRCY+KKVRY SRK LAEQRPR
Sbjct: 602 --NDSGIQNFSNNGLDIDRSR----REAALMKFRMKRKDRCYEKKVRYHSRKKLAEQRPR 655
Query: 699 VKGQFVRQ 706
+KGQFV Q
Sbjct: 656 IKGQFVSQ 663
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/240 (57%), Positives = 173/240 (72%), Gaps = 27/240 (11%)
Query: 3 MGEVVVSSEGGMDIDLETEKDGSSEVVRT-------------------------RWESFL 37
MGEVV+SS +++ ++E++ + ++ RW+ FL
Sbjct: 1 MGEVVISSGEELEVRSKSEREEEKQRKQSKEETGEVKKKKKKKKEGEGLNDGLVRWDGFL 60
Query: 38 PRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVEL 97
PRMVLRVLLVEADDSTRQII+ALLRKC YRV +VPDGL AWE LK RPH IDL+LTEV+L
Sbjct: 61 PRMVLRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEILKGRPHGIDLILTEVDL 120
Query: 98 PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLW 157
PSISG+ LLT++MEH++CKNIPVIMMS DSIS V KCML+GAAD+L+KP+R+NELRNLW
Sbjct: 121 PSISGYPLLTIIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKNELRNLW 180
Query: 158 QHVWRRH-SLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKG-SEKVSDAQ 215
QHVWRR SL GG+ PQ+ K A SEN+ AS+H+S AS Q++KG +EK SDAQ
Sbjct: 181 QHVWRRQSSLAGGNGPQDESVGQDKIEATSENSPASNHASGEMASIQRSKGQTEKGSDAQ 240
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 50/66 (75%)
Query: 652 GFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNET 711
F + S QR+AALTKFRLKRK+RCY+KKVRY+SRK LAEQRPRVKGQFVRQV +
Sbjct: 463 AFTHSYSHRSIQREAALTKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHIDP 522
Query: 712 KDANAD 717
A D
Sbjct: 523 SPAETD 528
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 320 PKNDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLH 379
P N R A + I C+++ + ++H+E D + + + S+ +
Sbjct: 244 PGNGRTGAYV--AIESCDND-----------VALANSHREAFDFMGASTN----RSSSFN 286
Query: 380 NRTKKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSA 439
N + SPHL+LSLR+S PS + +ER L HS ASAF+ Y N P +SA
Sbjct: 287 NVKINFDSSPHLDLSLRRSHPSGFEIRDTEERRALWHSNASAFTQYINR---PLQLPHSA 343
Query: 440 ELKDGSSKSDEILSNQLSENATGGFQP-CCATSSNSRENMTSLVMGQSEQAAVAFAGPHL 498
G+ K E+ +N + ++ G+ + + +++++ SL GQ++++ +A + P
Sbjct: 344 LESTGNQK--ELGTNYDRKISSTGYNSDALSLAPSTQKSEISLAAGQTKESEIATSSPGQ 401
Query: 499 GF----IPVPGVRFDNIFAGYSHIFPSIFYTKS 527
IP R +N+ Y +FP IF +S
Sbjct: 402 RVFPIQIPAKETRLNNLCNSYGSVFPPIFCKQS 434
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 122/167 (73%), Positives = 144/167 (86%), Gaps = 5/167 (2%)
Query: 3 MGE-VVVSSEGGMDIDLE--TEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISA 59
MGE VV+SS+ GMD + E + SSEVVR WE +LP+ VLRVLLVE+DDSTRQII+A
Sbjct: 1 MGEFVVLSSDDGMDTNEEMMVNRGKSSEVVR--WEKYLPKTVLRVLLVESDDSTRQIITA 58
Query: 60 LLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIP 119
LLRKC Y+V AV DGLAAWETLK + HSIDL+LTE++LPSISGFALL LVME++ CKNIP
Sbjct: 59 LLRKCYYKVVAVSDGLAAWETLKEKSHSIDLILTELDLPSISGFALLALVMENEACKNIP 118
Query: 120 VIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSL 166
VIMMS DSI++VLKCML+GAAD+LIKP+R+NEL+NLWQHVWRRHSL
Sbjct: 119 VIMMSSQDSITLVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRHSL 165
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 655 GISARHS-SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 710
G+SA+ SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V ++
Sbjct: 425 GLSAQQRWSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRAVNSD 481
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 156/214 (72%), Gaps = 11/214 (5%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
+WE FLP++ LRVLLVEADDSTRQII+ALLRKC YRVAAVPDGL AWE LK +P S+DL
Sbjct: 39 VKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDL 98
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
+LTEV+LPSISG+ALLTL+MEHD+CKNIPVIMMS DS++ V KCMLKGAAD+L+KP+RR
Sbjct: 99 ILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRR 158
Query: 151 NELRNLWQHVWRRH-SLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSE 209
NELRNLWQHVWRR SL P N K S NN ++ D+ S N G
Sbjct: 159 NELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANN-SNGKRDDHVVSG--NGG-- 213
Query: 210 KVSDAQSSRTSSPYLEAESAYMQ-NMQGLSQLKC 242
DAQSS T P +E ESA ++ + + Q++C
Sbjct: 214 ---DAQSSCT-RPEMEGESADVEVSARDAVQMEC 243
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 47/50 (94%)
Query: 659 RHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVK 708
+ S QR+AALTKFR+KRKDRCY+KKVRY+SRK LAEQRPR+KGQFVRQV+
Sbjct: 504 QQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQ 553
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 156/214 (72%), Gaps = 11/214 (5%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
+WE FLP++ LRVLLVEADDSTRQII+ALLRKC YRVAAVPDGL AWE LK +P S+DL
Sbjct: 148 VKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDL 207
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
+LTEV+LPSISG+ALLTL+MEHD+CKNIPVIMMS DS++ V KCMLKGAAD+L+KP+RR
Sbjct: 208 ILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRR 267
Query: 151 NELRNLWQHVWRRH-SLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSE 209
NELRNLWQHVWRR SL P N K S NN ++ D+ S N G
Sbjct: 268 NELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANN-SNGKRDDHVVSG--NGG-- 322
Query: 210 KVSDAQSSRTSSPYLEAESAYMQ-NMQGLSQLKC 242
DAQSS T P +E ESA ++ + + Q++C
Sbjct: 323 ---DAQSSCT-RPEMEGESADVEVSARDAVQMEC 352
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 48/51 (94%)
Query: 659 RHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
+ S QR+AALTKFR+KRKDRCY+KKVRY+SRK LAEQRPR+KGQFVRQV++
Sbjct: 613 QQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQS 663
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 161/211 (76%), Gaps = 8/211 (3%)
Query: 19 ETEKDGSSEVVRT-RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAA 77
E D + E R +WE FLPRM LRVLLVEADDSTR+I++ALLRKCGY+V++ DGL A
Sbjct: 7 EMRIDAAGEEPRVVKWEKFLPRMFLRVLLVEADDSTRKIVAALLRKCGYKVSSASDGLEA 66
Query: 78 WETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCML 137
W+TLK +P+ DLVLTEVELP++SG+ALL+++MEH+ CK+IPVIMMS +DS+ MV +CML
Sbjct: 67 WKTLKEKPNDTDLVLTEVELPNVSGYALLSMMMEHETCKSIPVIMMSSNDSMKMVFECML 126
Query: 138 KGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSD 197
KGAADFL+KP+R+NELRNLWQHVWRR S + +N+ V G A SE N AS+H+SD
Sbjct: 127 KGAADFLVKPIRKNELRNLWQHVWRRQS---SNRAENVPPVI--GAANSEYNSASNHTSD 181
Query: 198 YAASSQKNK-GSEKVSDAQSSRTSSPYLEAE 227
S+ K + GSEK +D QSS T P EAE
Sbjct: 182 CMDSNNKRRAGSEKGNDTQSSCT-RPDREAE 211
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 46/49 (93%)
Query: 659 RHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R S +R+AALTKFRLKRKDRC++KKVRYQSRK LAEQRPRVKGQFVRQV
Sbjct: 408 RLSIEREAALTKFRLKRKDRCFEKKVRYQSRKKLAEQRPRVKGQFVRQV 456
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 107/133 (80%), Positives = 120/133 (90%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
+WE FLP++ LRVLLVEADDSTRQIISALLRKC YRVAAVPDGL AWE LK P S+DL
Sbjct: 44 VKWERFLPKIALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGNPESVDL 103
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
+L EV+LPSISG+ALLTL+MEHDVCKNIPVIMMS HDS++ V KCMLKGAAD+L+KP+RR
Sbjct: 104 ILAEVDLPSISGYALLTLIMEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVKPLRR 163
Query: 151 NELRNLWQHVWRR 163
NELRNLWQHVWRR
Sbjct: 164 NELRNLWQHVWRR 176
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 45/48 (93%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S R+AAL KFR+KRKDRC+DKKVRY+SRK LAEQRPR+KGQFVRQV++
Sbjct: 440 SLREAALNKFRMKRKDRCFDKKVRYESRKKLAEQRPRIKGQFVRQVQS 487
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 159/208 (76%), Gaps = 8/208 (3%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL M +RVLLVEADDSTR+I++ALLRKC Y+V++ DGL AW+TLK P++IDLVL
Sbjct: 22 WEKFLRGMRVRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNNIDLVL 81
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEVELP++SG+ALL+++MEHD CK+IPVIMMS DS+ MV +CMLKGAADFL+KP+R+NE
Sbjct: 82 TEVELPNVSGYALLSMMMEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIRKNE 141
Query: 153 LRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVS 212
LRNLWQHVWRR S G +N V ++ SE N AS+HSS Y S+ KNKGSEK +
Sbjct: 142 LRNLWQHVWRRQSANGA---ENTPPVENETN--SEYNSASNHSSYYMDSNHKNKGSEKGN 196
Query: 213 DAQSSRTSSPYLEAESA--YMQNMQGLS 238
D QSS T P +AE++ M + G+S
Sbjct: 197 DTQSSCT-RPDTDAETSSDLMSDQHGVS 223
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/47 (87%), Positives = 45/47 (95%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
S +R+AALTKFRLKRKDRC++KKVRYQSRK LAEQRPRVKGQFVRQV
Sbjct: 398 SVEREAALTKFRLKRKDRCFEKKVRYQSRKKLAEQRPRVKGQFVRQV 444
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/167 (71%), Positives = 140/167 (83%), Gaps = 9/167 (5%)
Query: 3 MGEVVV-SSEGGMDIDLETEKD--GSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISA 59
MGE+VV SS+ GM ET K+ SSEVV+ WE +LP+ VLRVLLVE+D STRQII+A
Sbjct: 1 MGEIVVLSSDDGM----ETIKNRVKSSEVVQ--WEKYLPKTVLRVLLVESDYSTRQIITA 54
Query: 60 LLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIP 119
LLRKC Y+V AV DGLAAWE LK + H+IDL+LTE++LPSISGFALL LVMEH+ CKNIP
Sbjct: 55 LLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIP 114
Query: 120 VIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSL 166
VIMMS DSI MVLKCML+GAAD+LIKP+R+NEL+NLWQHVWRR +L
Sbjct: 115 VIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTL 161
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V
Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTV 460
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/167 (71%), Positives = 140/167 (83%), Gaps = 9/167 (5%)
Query: 3 MGEVVV-SSEGGMDIDLETEKD--GSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISA 59
MGE+VV SS+ GM ET K+ SSEVV+ WE +LP+ VLRVLLVE+D STRQII+A
Sbjct: 1 MGEIVVLSSDDGM----ETIKNRVKSSEVVQ--WEKYLPKTVLRVLLVESDYSTRQIITA 54
Query: 60 LLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIP 119
LLRKC Y+V AV DGLAAWE LK + H+IDL+LTE++LPSISGFALL LVMEH+ CKNIP
Sbjct: 55 LLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIP 114
Query: 120 VIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSL 166
VIMMS DSI MVLKCML+GAAD+LIKP+R+NEL+NLWQHVWRR +L
Sbjct: 115 VIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTL 161
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V
Sbjct: 423 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRAV 468
>gi|327342130|gb|AEA50852.1| aprr9 [Populus tremula]
Length = 296
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/289 (48%), Positives = 187/289 (64%), Gaps = 7/289 (2%)
Query: 432 PTPTSNSAELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAV 491
PT SN ++ K+ +SKS + SNQ+++N Q A+SS ++E MT+ V+GQS + +
Sbjct: 11 PTSASNGSDSKEEASKSPDPSSNQVAQNVGTISQIHDASSSGNQEIMTTPVIGQSGKVEL 70
Query: 492 AFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISAS 551
A P LG IPV G R DNI G H+F + T+S AW+PN + ++ FP +AS
Sbjct: 71 AHPSPQLGLIPVLGTRLDNISTGCGHVFSPLCCTQSNA--AWNPNLAG-RQQSPFPTTAS 127
Query: 552 VHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGL 611
VHSNP+V DS+Q + + E VDQ +Q+ P++++RH SPA QS++S LCN +
Sbjct: 128 VHSNPEVLDSKQNHKCSAETTCCYVDQNDLQQNNREPVDEMRHDSPAAGQSTSSSLCNRV 187
Query: 612 ANNSSSGTY----SRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAA 667
A+N++S Y SR D N+SS + +NLN F HDGF G + SSQR+AA
Sbjct: 188 ADNNNSSAYESFGSRNDVNASSVGTAEKSMAQENLNNGCNFNHDGFGGSDSYRSSQREAA 247
Query: 668 LTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
LTKFRLKRKDRCY+K+VRYQSRK LAEQRPRVKGQFVRQV+N+ AN
Sbjct: 248 LTKFRLKRKDRCYEKRVRYQSRKRLAEQRPRVKGQFVRQVQNDCPVANG 296
>gi|281308394|gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
Length = 628
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 147/208 (70%), Gaps = 12/208 (5%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRV-------AAVPDGLAAWETLKCRP 85
WE FLP++ LRVLLVEADDSTRQIISALLRKC YRV AAVPDGL AWE L+ +P
Sbjct: 103 WERFLPKISLRVLLVEADDSTRQIISALLRKCSYRVFPFHFSVAAVPDGLKAWEMLRGKP 162
Query: 86 HSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
S+DL+LTEV+LPSISG+ALLTL+MEHD+CKNIPVIMMS DS++ V KCMLKGAAD+L+
Sbjct: 163 ESVDLILTEVDLPSISGYALLTLIMEHDLCKNIPVIMMSTQDSVNTVYKCMLKGAADYLV 222
Query: 146 KPVRRNELRNLWQHVWRRHSLL--GGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQ 203
KP+RRNELRNLWQHVWRR S L G + P + K S NN S+ + + Q
Sbjct: 223 KPLRRNELRNLWQHVWRRQSSLAPGSNFPVDESLGQQKPEGASANNSTSNQVNGFQREEQ 282
Query: 204 K--NKGSEKVSDAQSSRTSSPYLEAESA 229
G D QSS S P ++ ESA
Sbjct: 283 PVIGNGGGGGGDDQSS-CSRPEMQGESA 309
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 47/51 (92%)
Query: 659 RHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
+ S QR+AAL KFR+KRK+RC++KKVRY+SRK LAEQRPR+KGQFVRQV++
Sbjct: 568 QQSLQREAALNKFRMKRKERCFEKKVRYESRKKLAEQRPRIKGQFVRQVQS 618
>gi|297812633|ref|XP_002874200.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
gi|297320037|gb|EFH50459.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 149/214 (69%), Gaps = 16/214 (7%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
+WE FLP++ LRVLLVEADDSTRQIISALLRKC YRVAAVPDGL AWE LK +P S+DL
Sbjct: 41 VKWERFLPKIALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGKPESVDL 100
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
+LTEV+LPSISG+ALLTL+MEHD+CKNIPVI DS++ V KCMLKGAAD+L+KP+RR
Sbjct: 101 ILTEVDLPSISGYALLTLIMEHDICKNIPVIST---DSVNTVYKCMLKGAADYLVKPLRR 157
Query: 151 NELRNLWQHVWRRH-SLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSE 209
NELRNLWQHVWRR SL P L + K S NN N G
Sbjct: 158 NELRNLWQHVWRRQTSLAPDSFP--LDERQQKPEGASANNSNGKREEHVVIG---NGG-- 210
Query: 210 KVSDAQSSRTSSPYLEAESAYMQ-NMQGLSQLKC 242
DAQSS T P +E ESA ++ N + Q++C
Sbjct: 211 ---DAQSSCT-RPEMEGESADVEVNARDAVQMEC 240
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 144/335 (42%), Gaps = 78/335 (23%)
Query: 385 CEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNN----SKACPTPTSNSAE 440
++ +EL L S P S +Q + +R +L+ S+ASAF+ Y + ++ +P
Sbjct: 283 AQYESRIELDLSLSRPIPSENQSSGDRPSLHPSSASAFTRYVHRPLQTQCSASPVVPDQR 342
Query: 441 LKDGSSKSDEI-LSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAG---- 495
+S+ D I L NQ + + P R N TS G ++ F+
Sbjct: 343 KNFAASQDDNIVLINQYNTSEPPPSAP--------RRNDTSFYTG-ADSPGPPFSNQMNS 393
Query: 496 -PHLGFIPVPGVRFDNI-FAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVH 553
P G P P +NI F G P+ Y S + PA + H + S+ H
Sbjct: 394 WPGQGSYPTP-TPINNIQFRG-----PNTAYA-SAMAPASVSPTPSSVSPHEY--SSMFH 444
Query: 554 SNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLAN 613
P E R G ++ +E+ R+ S A S+ + L
Sbjct: 445 --PFNGKPEGFQDRDGSMD----------------VEERRYVSSATEHSAIGNHIDQL-- 484
Query: 614 NSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRL 673
I++ + +S G Q+L QR+AALTKFR+
Sbjct: 485 ---------IEKKNEDGYSSSVGKFQQSL--------------------QREAALTKFRM 515
Query: 674 KRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVK 708
KRKDRC++KKVRY+SRK LAEQRPR+KGQFVRQV+
Sbjct: 516 KRKDRCFEKKVRYESRKKLAEQRPRIKGQFVRQVQ 550
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 110/162 (67%), Positives = 134/162 (82%), Gaps = 11/162 (6%)
Query: 25 SSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCR 84
S EVV+ WE +LP+ VL+VLLVE+DDSTRQII+ALL+KC Y+V AV DGLAAWETLK +
Sbjct: 11 SPEVVQ--WEKYLPKTVLKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLKEK 68
Query: 85 PHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFL 144
+ IDL+LTE++LP+ISGFALL LVMEH+ CKNIPVIMMS DS++MVLKCMLKGAAD+L
Sbjct: 69 SNEIDLILTELDLPAISGFALLALVMEHEACKNIPVIMMSSEDSMTMVLKCMLKGAADYL 128
Query: 145 IKPVRRNELRNLWQHVWRRHSLLGGH------VP---QNLHD 177
IKP+R+NEL+NLWQHVWRR ++ GH +P QNL D
Sbjct: 129 IKPMRKNELKNLWQHVWRRLAVRDGHNGHGLSLPASQQNLED 170
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 70/121 (57%), Gaps = 12/121 (9%)
Query: 590 EQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASG-TGTVPQNLNGCTLF 648
E+LR + SSN + ++S SG RN ++++ Q GC L
Sbjct: 298 EKLRFDYGSATTSSNH---ENMGSSSLSGQNELSFRNQVGSESTNDVKAKEQEEEGCGLS 354
Query: 649 IHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVK 708
+ + SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V
Sbjct: 355 VE--------QRRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRAVM 406
Query: 709 N 709
N
Sbjct: 407 N 407
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 230/734 (31%), Positives = 328/734 (44%), Gaps = 102/734 (13%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLP L+VLLVE DDSTR ++SALLR CGY V AV +GL AW+ L+ + IDLVL
Sbjct: 28 WERFLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVL 87
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL+ +M H C+NIPVIMMS HDS+++V KC+ KGA DFL+KP+R+NE
Sbjct: 88 TEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNE 147
Query: 153 LRNLWQHVWRR-HSLLGGHVPQNL--HDVYHKGGAISENNMASSHSSDYAASSQKN--KG 207
L+ LWQHVWR+ HS G + GA +N S+ D S N G
Sbjct: 148 LKILWQHVWRKCHSASGSGSESAVRTQKSTKSNGADESDNDTGSNDDDGIGSVGLNARDG 207
Query: 208 SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESL 267
S+ S QSS T +E ES + L +TC+ + + E L
Sbjct: 208 SDNGSGTQSSWTKR-AVEVESPKPMSPWDQDHLS-DPPDSTCAQVIHSRPEACDNSWVPL 265
Query: 268 MPESKTGGASDEL--IVSEK-----------------LNRSGSEVAQCDDALRLEEDYGC 308
K G DEL IV K + R + +A D E +
Sbjct: 266 ATMKKCGEQDDELDNIVMGKDLEIGVPRIPNLQLKDPIKRVPTNIADNDG-----EKFPE 320
Query: 309 VKTMPQGEGEGPKNDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPN 368
+K+ G + +N++ CN EL + DL G + P S
Sbjct: 321 IKSKHDGGHLEKRQQELNSE------KCNTELRNQGN---DLKGGGITNSANPRMDSLVL 371
Query: 369 DGIPDKLSTLHNRTKKCEFS----PHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSW 424
D +P+ LS+ NR + + P ELSL++ + +R+ L HS SAFS
Sbjct: 372 D-VPNGLSS--NRKNEVTYETKEVPSFELSLKRLRDIGDAGASSHDRNVLRHSDLSAFSR 428
Query: 425 YNN-SKACPTPTSN--SAELKDGSSKSDEILSNQ-LSENATGGFQPCCATSSNSRENMTS 480
YN+ S A PT N S D SS++ + S Q L N+ +T N R N +S
Sbjct: 429 YNSASTADQAPTGNVGSCSPLDNSSEAAKTESMQNLQSNSN-------STPPNQRSNGSS 481
Query: 481 LVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSI-FYTKSGLQPAWSPNSSH 539
+ FA P ++ + + P++ + S QP
Sbjct: 482 HNNDMGSTNNITFAKP-------------SVISDKPTLKPTVKCHYPSAFQPV------- 521
Query: 540 QKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQ--TVCEQSKGRPLEQLRHGSP 597
Q +H P + D + ++ +N Q C + + + H
Sbjct: 522 QNDHTALP-QPVIQGKGDAPIANTTLVKSRGVNQQGQVQHHNHCVHNMPQQQQLTNHDDL 580
Query: 598 AGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFI-----HDG 652
+ N ++ + C G +N S+ T N+ +G+ NG ++ + G
Sbjct: 581 SLNMTAAAPQC-GSSNMLSTPTQG----NAGDYSLNGSDHGSNGQNGSSIALSGAVEKGG 635
Query: 653 FNGISARHSSQRDAALTKFRLK----------RKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
G S+ +F L+ RK+RC++KKVRYQSRK LAEQRPR++GQ
Sbjct: 636 TPGPGDESGSRSGVGRNRFALREAALSKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQ 695
Query: 703 FVRQVKNETKDANA 716
FVRQV E KD +A
Sbjct: 696 FVRQVGPEHKDEDA 709
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 144/214 (67%), Gaps = 20/214 (9%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
+R LPRM +RVLL E DDSTR II ALLRKCGYRVAA DG+ AW+ LK + +IDL
Sbjct: 32 SRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDL 91
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
VLTEVELP +SGF LL+ +MEHD CKNIPVIMMS +DS+SMV KCMLKGAADFL+KP+R+
Sbjct: 92 VLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRK 151
Query: 151 NELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKN----- 205
NELRNLWQHVWR+ G + DV H E+N+ H + ++
Sbjct: 152 NELRNLWQHVWRKQLSSG------VLDVQHTQ---QEDNLTERHEQKTGVTKAEHVTENV 202
Query: 206 -----KGSEKVSDAQSSRTSSPYLEAESAYMQNM 234
+ SE+ SDAQSS T S LEA+S + N+
Sbjct: 203 VHKNMECSEQESDAQSSCTRS-ELEADSRHTNNL 235
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 171/374 (45%), Gaps = 48/374 (12%)
Query: 337 NDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNR--TKKCEFSP--HLE 392
ND E +S ++L+ DN Q+ N + ++ ++R KC P LE
Sbjct: 287 NDINCEKASRDMELVHIIDNQQK-------NNTHMEMDVARANSRGNDDKCFSIPAHQLE 339
Query: 393 LSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELKDGSSKSDEIL 452
LSLR+S S Q +ER TLNHS +S FS YN A T + A+ S+ ++
Sbjct: 340 LSLRRSDYSRLESQEKNERRTLNHSTSSPFSLYNCRTASSTINAGDAQACSTSATHIDL- 398
Query: 453 SNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIF 512
EN G + S + RE Q V F +PV G+ FD
Sbjct: 399 -----ENKNGDSK---TPSQDKRET------NQPPIRVVPFP------VPVGGLTFDGQP 438
Query: 513 AGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEIN 572
S+FY +S P W+ +S ++ IS + P D++QV +
Sbjct: 439 FWNGAPVASLFYPQSA-PPIWNSKTSTWQDATTQAISLQ-QNGPKDTDTKQVENVEEQTA 496
Query: 573 HNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKA 632
+ + P ++ RH SP +S +S + + A + SG+ N A
Sbjct: 497 RSHLSANRKHLRIEIPTDEPRHVSPTTGESGSSTVLDS-ARKTLSGSVCDSSSNHMIAPT 555
Query: 633 SGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSL 692
+ VP+N +G RH SQR+AAL KFRLKRKDRC++KKVRYQSRK L
Sbjct: 556 ESSNVVPENPDGL-------------RHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLL 602
Query: 693 AEQRPRVKGQFVRQ 706
AEQRPRVKGQFVRQ
Sbjct: 603 AEQRPRVKGQFVRQ 616
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 141/199 (70%), Gaps = 13/199 (6%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
LPRM +RVLL E DDSTR +ISALLRKCGYRVAA DG+ AW+ LK + +IDLVLTEV
Sbjct: 38 MLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEV 97
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
ELP +SGF LL+ +MEHD KNIPVIMMS HDS+SMV KCMLKGA+DFL+KP+R+NELRN
Sbjct: 98 ELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNELRN 157
Query: 156 LWQHVWRRHSLLGGHVPQNLHD------VYHKGGAISENNMASSHSSDYAASSQKNKGSE 209
LWQHVWR+ GG Q++ + + K G ++N+ S + + SE
Sbjct: 158 LWQHVWRKQLANGGPDVQHIQEENLAERMEQKTGVTKDDNLNSD------GPCKNRECSE 211
Query: 210 KVSDAQSSRTSSPYLEAES 228
+ SDAQSS T S LEAE+
Sbjct: 212 QESDAQSSCTRS-ELEAET 229
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 168/385 (43%), Gaps = 61/385 (15%)
Query: 337 NDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLR 396
ND E +S ++L+ DN Q K T D + ++ N K + LELSLR
Sbjct: 251 NDNNSERTSRDMELVHIMDNQQ----KHDTQRDVDTMRTTSRRNDEKNSIPAHQLELSLR 306
Query: 397 KS-FPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELKDGSSKSDEILSNQ 455
++ + N + ND R TLNHS +SAF YN A + +L S S+ ++
Sbjct: 307 RTDYGKLENHEKND-RRTLNHSTSSAFYLYNCRTASSLGNAGDGQL---CSTSETLVD-- 360
Query: 456 LSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAG-PHLGFIPVPGVRFDNIFAG 514
EN G ++ + +V F G P PV
Sbjct: 361 -VENRNGDLAALSEDTTETNRPPIRVVPFPVPVQCFTFDGQPFWNGTPVAS-------PF 412
Query: 515 YSHIFPSIFYTKSGLQPAWSPNSSH-----QKEHHRFPISASVHSNPDVHDSEQVY---- 565
Y P I+ +K+ P W ++ QK + P+ V ++E+ +
Sbjct: 413 YPQSAPPIWNSKT---PTWQESTPQATSLPQKSQQKEPVEMDAKP---VENAEEQFVVGP 466
Query: 566 -GRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANN-SSSGTYSRI 623
+G+ H + P + LRH SP +S S + + N SSSG S
Sbjct: 467 PSASGKQLHVEI-----------PKDDLRHISPVTGESGISTVLDSTRNTLSSSGCDSTS 515
Query: 624 DRNSSSAKASGTGT--VPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYD 681
++ ++ + S VP+ L RH SQR+AAL KFRLKRKDRC++
Sbjct: 516 NQITAPTEPSSNVYRGVPETARAEGL-----------RHLSQREAALNKFRLKRKDRCFE 564
Query: 682 KKVRYQSRKSLAEQRPRVKGQFVRQ 706
KKVRYQSRK LAEQRPRVKGQFVRQ
Sbjct: 565 KKVRYQSRKLLAEQRPRVKGQFVRQ 589
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 132/187 (70%), Gaps = 14/187 (7%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
RW+ LPR LRVLLVE DDSTRQI++ALLRKCGYRVAAV DG+ AWE ++ R + DL
Sbjct: 42 VRWDQILPRRSLRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVMRERAYDFDL 101
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
VLTEV +PS+SG LL+ + CKNIPVIMMS DSI VLKCM KGA DFL+KPVR+
Sbjct: 102 VLTEVAMPSLSGIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRK 161
Query: 151 NELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSH-SSDYAASSQKNKGSE 209
NEL NLWQHVWRRH++ + G SENN AS+H S++ A S+ + ++
Sbjct: 162 NELGNLWQHVWRRHAM----------NCQTNG---SENNAASNHVSTNVANGSKTGENND 208
Query: 210 KVSDAQS 216
+ SDAQS
Sbjct: 209 EESDAQS 215
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 145/365 (39%), Gaps = 87/365 (23%)
Query: 388 SPHLELSL-RKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKA------------CPTP 434
S LE +L ++ + + +Q E+ NHS +SAFS Y N + C
Sbjct: 358 SQFLETNLGKQQYRNGYKNQEFREKDIFNHSNSSAFSRYGNRRIESSGEIQFLPSRCIVG 417
Query: 435 TSNSAELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVA-- 492
KD + + +L N + T +S E + + + A A
Sbjct: 418 QEQHVHGKDPVFQPNGVLLPPNDHNTGESTRQARITLDSSMEGADIICSSSAREDAGASS 477
Query: 493 -------FAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHR 545
+ P GF+PVP I G + P ++ + LQP +
Sbjct: 478 SSHRKDSMSHPSYGFVPVP------IPVGA--MMP--YHCGAILQPVY------------ 515
Query: 546 FPISASVHSNPDVHDSEQVYGRTGEINH---------NSVDQTVCEQSK----------- 585
+P +H N + ++ +G+ N+ + VD+ + K
Sbjct: 516 YPQGPLMHCNSSAINKATIHQTSGQSNYREDCGSGRPSQVDEHKQSEEKHQLHHSRQIHR 575
Query: 586 --GRPLEQLRHGSPAGNQSSNSG--LCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQN 641
G+P++ +R NQS++ +C G + +G+G N
Sbjct: 576 ESGQPVDMVRAHMDHANQSASCSRDICKG-------------------SGCTGSGEADTN 616
Query: 642 LNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKG 701
N +GI S R+AAL KFR+KRKDRC+DKKVRY SRK LAEQRPRVKG
Sbjct: 617 ANTTVALESGNESGIQNSDRSHREAALMKFRMKRKDRCFDKKVRYHSRKKLAEQRPRVKG 676
Query: 702 QFVRQ 706
QFV Q
Sbjct: 677 QFVSQ 681
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 210/760 (27%), Positives = 326/760 (42%), Gaps = 101/760 (13%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WESFL + LR+LLVE DD+TR ++ ALLR C Y V AV +G AW L+ + DLVL
Sbjct: 174 WESFLLKRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVL 233
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+V +P +SG LL+ +M+ + C+ +P+++MS +DS+ +V +C+ KGA D+L+KPVR+NE
Sbjct: 234 TDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNE 293
Query: 153 LRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENN--MASSHSSDYAASSQKNKGSEK 210
LRN +W+ HV + H +A S A + ++
Sbjct: 294 LRN----LWQ-------HVWRKCHSSSGSKSGSGSQTGEVARPQSRGVEADDNPSGSNDG 342
Query: 211 VSDAQSSRTSSPYLEAESAYMQNMQG-----LSQLKCRSASNTCSTDMERQNECAKLETE 265
+ S S L A+ N G L L + + T + D + + + ET
Sbjct: 343 NGSSDGSDNGSSRLNAQGGS-DNGSGNQARTLPVLVPMNNAVTAAADGDEEGQATSQETG 401
Query: 266 SLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRI 325
+ + E G E+ + Q D + ++D CV Q G P D +
Sbjct: 402 ANLDEEM--GHDLEMATRRSTCNTAKLDQQPDVGRQQDDDDACVM---QDVGPSPGEDNV 456
Query: 326 NADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKC 385
+ T G G +E S A+DLI + + + +G + L R +
Sbjct: 457 ESPSTSGKDGTTEE---SSLKAVDLINGIACQPQT--QGAEQAEGSENDDGELDQRGRSS 511
Query: 386 -------EFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNS----KACPTP 434
+F LELSL++ + ND +ER L HS SAFS Y + + C P
Sbjct: 512 PKDHSGSDFGSMLELSLKRPRSAVDNDGDTEERQPLRHSGGSAFSRYGSGGTIIQQCHQP 571
Query: 435 TSN----SAELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVM------- 483
++ + G G C +S S E T +
Sbjct: 572 GNSLPVGGYPMSGGYGVYGMSGGTSGGSLRLGMGMERCGSSKGSAEGTTPPPLHPQSAEA 631
Query: 484 ----------------GQSEQAAVAFAGPHLGFIPVPGVR-FDNIFAGYSHIFPSIFYTK 526
+E+A +A P IP PG++ +D + Y ++Y
Sbjct: 632 AGGQDGGGADGYGSARQSAEEAMIAPGVPMAIPIPPPGMQAYDGMGGAYGPAMHPMYYAH 691
Query: 527 SGLQPAW-SPNSSHQKE----HHRFPI-----SASVH---SNPDVHDSEQVYGRTGEINH 573
+ AW + ++ H E + + P S H + P + +G G+ +
Sbjct: 692 A---SAWMAASARHMGERVDVYSQTPAFQEQNPGSGHHSQAGPSHQHTHHHHGDGGQPSG 748
Query: 574 NSVDQTVCEQSKGRPLEQL-RHGSPAGNQSSNS-------GLCNGLANNSSSGTYSRIDR 625
N+ Q +QS P+ R GS + S S G NG N S+SG+ + ++
Sbjct: 749 NAGVQHEQQQSVITPMSGAPRCGSTGVDGQSGSSNGYGSTGNGNGSMNGSASGSNTGVNN 808
Query: 626 NSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHS--------SQRDAALTKFRLKRKD 677
+ + NG H +G+S + ++R+AAL KFR KRK+
Sbjct: 809 GQNGLVVTPMANANSGNNGVG-GTHPAMDGVSGGNGLCTEQIRFARREAALNKFRQKRKE 867
Query: 678 RCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
RC+ KKVRYQSRK LAEQRPRV+G FVRQ ++ +A+
Sbjct: 868 RCFGKKVRYQSRKKLAEQRPRVRGLFVRQAAHDPSAGDAE 907
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 210/760 (27%), Positives = 326/760 (42%), Gaps = 101/760 (13%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WESFL + LR+LLVE DD+TR ++ ALLR C Y V AV +G AW L+ + DLVL
Sbjct: 174 WESFLLKRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVL 233
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+V +P +SG LL+ +M+ + C+ +P+++MS +DS+ +V +C+ KGA D+L+KPVR+NE
Sbjct: 234 TDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNE 293
Query: 153 LRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENN--MASSHSSDYAASSQKNKGSEK 210
LRN +W+ HV + H +A S A + ++
Sbjct: 294 LRN----LWQ-------HVWRKCHSSSGSKSGSGSQTGEVARPQSRGVEADDNPSGSNDG 342
Query: 211 VSDAQSSRTSSPYLEAESAYMQNMQG-----LSQLKCRSASNTCSTDMERQNECAKLETE 265
+ S S L A+ N G L L + + T + D + + + ET
Sbjct: 343 NGSSDGSDNGSSRLNAQGGS-DNGSGNQARTLPVLVPMNNAVTAAADGDEEGQATSQETG 401
Query: 266 SLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRI 325
+ + E G E+ + Q D + ++D CV Q G P D +
Sbjct: 402 ANLDEEM--GHDLEMATRRSTCNTAKLDQQPDVGRQQDDDDACVM---QDVGPSPGEDNV 456
Query: 326 NADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKC 385
+ T G G +E S A+DLI + + + +G + L R +
Sbjct: 457 ESPSTSGKDGTTEE---SSLKAVDLINGIACQPQT--QGAEQAEGSENDDGELDQRGRSS 511
Query: 386 -------EFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNS----KACPTP 434
+F LELSL++ + ND +ER L HS SAFS Y + + C P
Sbjct: 512 PKDHSGSDFGSMLELSLKRPRSAVDNDGDTEERQPLRHSGGSAFSRYGSGGTIIQQCHQP 571
Query: 435 TSN----SAELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVM------- 483
++ + G G C +S S E T +
Sbjct: 572 GNSLPVGGYPMSGGYGVYGMSGGTSGGSLRLGMGMERCGSSKGSAEGTTPPPLHPQSAEA 631
Query: 484 ----------------GQSEQAAVAFAGPHLGFIPVPG-VRFDNIFAGYSHIFPSIFYTK 526
+E+A +A P IP PG + +D + Y ++Y
Sbjct: 632 AGGQDGGGADGYGSARQSAEEAMIAPGVPMAIPIPPPGMLAYDGMGGAYGPAMHPMYYAH 691
Query: 527 SGLQPAW-SPNSSHQKE----HHRFPI-----SASVH---SNPDVHDSEQVYGRTGEINH 573
+ AW + ++ H E + + P S H + P + +G G+ +
Sbjct: 692 A---SAWMAASARHMGERVDVYSQTPAFQEQNPGSGHHSQAGPSHQHTHHHHGDGGQPSG 748
Query: 574 NSVDQTVCEQSKGRPLEQL-RHGSPAGNQSSNS-------GLCNGLANNSSSGTYSRIDR 625
N+ Q +QS P+ R GS + S S G NG N S+SG+ + ++
Sbjct: 749 NAGVQHEQQQSVITPMSGAPRCGSTGVDGQSGSSNGYGSTGNGNGSMNGSASGSNTGVNN 808
Query: 626 NSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHS--------SQRDAALTKFRLKRKD 677
+ + NG H +G+S + ++R+AAL KFR KRK+
Sbjct: 809 GQNGLVVTPMANANSGNNGVG-GTHPAMDGVSGGNGLCTEQIRFARREAALNKFRQKRKE 867
Query: 678 RCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
RC++KKVRYQSRK LAEQRPRV+G FVRQ ++ +A+
Sbjct: 868 RCFEKKVRYQSRKKLAEQRPRVRGLFVRQAAHDPSAGDAE 907
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 213/423 (50%), Gaps = 46/423 (10%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+SFLP L+VLLVE DDSTR +++ALLR C Y V AV +GL AW+ L+ + ID+VL
Sbjct: 86 WDSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVL 145
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P ISG LL +M H KNIPVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 146 TEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 205
Query: 153 LRNLWQHVWRR----HSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNK-G 207
L+NLWQHVWRR Q V K SENN SS D ++ + G
Sbjct: 206 LKNLWQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDG 265
Query: 208 SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESL 267
S+ S QSS T AE Q + L QL + +TC + + + +
Sbjct: 266 SDNGSGTQSSWTKRA---AEVDSPQPLSPLDQL-ADAPDSTCPQVIHTKPGTLSNQWVHV 321
Query: 268 MPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMP--QGEGEGPKNDRI 325
+ E+K DE + + R + A++LE + T P + + + P++D
Sbjct: 322 I-ETKECQGKDEQPDNVAMGRDLELGVATNPAVQLEYQHEKFSTYPTCKRQNKLPESDSK 380
Query: 326 NADITYGIH-----GCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHN 380
D + H C D +E TF+N P+ LS + I DK S
Sbjct: 381 PFDKEHLEHNSTSANCTDPQVESR--------TFEN----PNGLSDVSQ-IKDKGS---- 423
Query: 381 RTKKCEFS--PHLELSLRKSFPSTSNDQG---NDERHTLNHSAASAFSWYNN-SKACPTP 434
CE + P L+LSL++ + D G +D+R L HS SAFS YN S A P
Sbjct: 424 ----CETTELPPLDLSLKRL--RGAGDVGACVHDDRSILRHSDLSAFSKYNTASSANQAP 477
Query: 435 TSN 437
T N
Sbjct: 478 TGN 480
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 652 GFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNET 711
G N + +QR+AALTKFR KRK+RC++KKVRYQSRK LAEQRPR++GQFVRQ ++
Sbjct: 703 GGNRVEEDRFAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQNVSDN 762
Query: 712 KDANADG 718
K A DG
Sbjct: 763 K-AGKDG 768
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 108/133 (81%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RWE FLPR LRVLLVE DDSTR I++ALLRKC Y VA+V DG+ AW+ +K + + D++
Sbjct: 47 RWERFLPRRSLRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIVKEKNFNFDII 106
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
L+EVE+PS SG +LLT +M ++ ++IPVIMMS DS+S+V KCM KGA DFL+KPVR+N
Sbjct: 107 LSEVEVPSFSGISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKN 166
Query: 152 ELRNLWQHVWRRH 164
ELRNLWQHVWRRH
Sbjct: 167 ELRNLWQHVWRRH 179
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNET 711
S R+AAL KFRLKRKDRC++KKVRY SRK LAEQRPRVKGQFVRQ + T
Sbjct: 442 SHREAALMKFRLKRKDRCFEKKVRYHSRKMLAEQRPRVKGQFVRQTADPT 491
>gi|224132558|ref|XP_002321351.1| response regulator [Populus trichocarpa]
gi|222868347|gb|EEF05478.1| response regulator [Populus trichocarpa]
Length = 477
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 261/540 (48%), Gaps = 95/540 (17%)
Query: 197 DYAASSQKNKGSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQ 256
DY S N S S S + P LEAE A+M+NMQ Q S + T+M++
Sbjct: 13 DYLKKSLSNP-SNLASSFHKSSCTKPGLEAEGAHMENMQEFLQ-PVWSKFSLTDTNMQKH 70
Query: 257 NECAKLETESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGE 316
E L + L+ +S+ GS A C+D+ ++ D K + G
Sbjct: 71 EEHVNLGQKLLVRDSEA---------------EGSATAVCEDSNKITVD----KEITPGS 111
Query: 317 GEGPKNDRINADITYGIHGCND--ELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDK 374
G R+ A+I I GC+ L AID +G NH
Sbjct: 112 G------RVTANI--AIEGCDKIGALANSPREAIDFMGASTNH----------------- 146
Query: 375 LSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTP 434
S+ +N SPHL+LSLR+S PS Q +ERHTL HS ASAF+WY N +A P
Sbjct: 147 -SSFNNVEIHFCSSPHLDLSLRRSHPSGFETQVTEERHTLRHSNASAFTWYTN-RASQLP 204
Query: 435 TSNSAELKDGSSKSDEILSN---QLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAV 491
S A + +E +N ++S N G + + ++R + SL GQ+++ +
Sbjct: 205 HSALA----NTGNQEEFRANYDGKISSNVNGYNSDALSLAPSTRRSAISLAAGQTKEYEI 260
Query: 492 AFAGPHLGF----IPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKE--HHR 545
+ IPV RF+N+ Y + P P S +S+ QKE H
Sbjct: 261 VTSSSGEKVFPIHIPVKDTRFNNLCNSYGAVLP----------PMMSQSSASQKEPIHKV 310
Query: 546 FPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQ-SKGRPLEQLRHGSPAGNQSSN 604
P S + + V Q+ R G+ ++S++ ++ +Q +K LE H S A +QS++
Sbjct: 311 NPFQCSNYGSTSV----QLCDRLGQNANDSINGSLQKQENKLDSLEGREHISSATDQSAS 366
Query: 605 SGLCNGLANN-------SSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGIS 657
S CNG A++ S+SG+YS D+ ++ + AS + +N G +F H+ +
Sbjct: 367 SSFCNGAASHFNSIGYGSASGSYSNADQIATVSAASES----KNEEG--VFTHNS----N 416
Query: 658 ARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
+ S QR+AALTKFRLKRK+RCY+KKVRY+SRK LAEQRPRVKGQFVRQV + A D
Sbjct: 417 SHRSIQREAALTKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHIDPSPAETD 476
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 115/158 (72%), Gaps = 5/158 (3%)
Query: 12 GGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAV 71
G I+ + E+ G V+R WE FLP LRVLLVE DD TRQ++ ALLRKCGY V +
Sbjct: 56 GAQQINEQKEQQG--RVIR--WERFLPVKTLRVLLVENDDCTRQVVGALLRKCGYEVISA 111
Query: 72 PDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISM 131
+GL AW+ L+ + IDLVLTEV +P +SG +LL+ +M H +CK+IPVIMMS +DS+
Sbjct: 112 ENGLHAWQYLEDLQNRIDLVLTEVAMPCLSGISLLSKIMSHKICKDIPVIMMSKNDSMGT 171
Query: 132 VLKCMLKGAADFLIKPVRRNELRNLWQHVWRR-HSLLG 168
V KC+ KGA DFL+KP+R+NEL+NLWQH+WRR HS G
Sbjct: 172 VFKCLSKGAVDFLVKPIRKNELKNLWQHIWRRCHSSSG 209
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 210/415 (50%), Gaps = 45/415 (10%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+SFLP L+VLLVE DDSTR +++ALLR C Y V AV +GL AW+ L+ + ID+VL
Sbjct: 86 WDSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVL 145
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P ISG LL +M H KNIPVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 146 TEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 205
Query: 153 LRNLWQHVWRR----HSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNK-G 207
L+NLWQHVWRR Q V K SENN SS D ++ + G
Sbjct: 206 LKNLWQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDG 265
Query: 208 SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESL 267
S+ S QSS T AE Q + L QL + +TC + + + +
Sbjct: 266 SDNGSGTQSSWTKRA---AEVDSPQPLSPLDQL-ADAPDSTCPQVIHTKPGTLSNQWVHV 321
Query: 268 MPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMP--QGEGEGPKNDRI 325
+ E+K DE + + R + A++LE + T P + + + P++D
Sbjct: 322 I-ETKECQGKDEQPDNVAMGRDLELGVATNPAVQLEYQHEKFSTYPTCKRQNKLPESDSK 380
Query: 326 NADITYGIH-----GCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHN 380
D + H C D +E TF+N P+ LS + I DK S
Sbjct: 381 PFDKEHLEHNSTSANCTDPQVESR--------TFEN----PNGLSDVSQ-IKDKGS---- 423
Query: 381 RTKKCEFS--PHLELSLRKSFPSTSNDQG---NDERHTLNHSAASAFSWYNNSKA 430
CE + P L+LSL++ + D G +D+R L HS SAFS YN + +
Sbjct: 424 ----CETTELPPLDLSLKRL--RGAGDVGACVHDDRSILRHSDLSAFSKYNTASS 472
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 106/133 (79%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RWE FLPR LRVLLVE DD TR I++ALLRKC Y VAAV DG+ AW+ ++ + + D++
Sbjct: 63 RWERFLPRRSLRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVEEKNFNFDII 122
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
L+EVE+PS SG LL+ +M ++ ++IPVIMMS DS+S+V KCM KGA DFL+KPVR+N
Sbjct: 123 LSEVEVPSFSGINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKN 182
Query: 152 ELRNLWQHVWRRH 164
ELRNLWQHVWRRH
Sbjct: 183 ELRNLWQHVWRRH 195
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 41/45 (91%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
S R+AAL KFRLKRKDRC++KKVRY SRK LAEQRPRVKGQFVRQ
Sbjct: 441 SHREAALMKFRLKRKDRCFEKKVRYHSRKMLAEQRPRVKGQFVRQ 485
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 128/195 (65%), Gaps = 5/195 (2%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
T WE FLP ++VLLV+ DDSTR ++ ALLR CGY V AV +GL AW+ L+ + IDL
Sbjct: 63 TYWERFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDL 122
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
VLTEV +P +SG LL +M H KNIPVIMMS HDS+ +V KC+ KGAADFL+KP+RR
Sbjct: 123 VLTEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRR 182
Query: 151 NELRNLWQHVWRRHSLLGGHVPQNLHDV--YHKGGAIS--ENNMASSHSSDYAASSQKNK 206
NEL+NLWQHVWRR ++ + + K +I +NN SS +DY + +
Sbjct: 183 NELKNLWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSSDENDYGSRGLSVR 242
Query: 207 -GSEKVSDAQSSRTS 220
GS+K S QSS T+
Sbjct: 243 DGSDKGSGTQSSWTT 257
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 47/54 (87%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
R+AALTKFRLKRK+RC++KKVRYQSRK LA+QRPRV+GQFV+Q+ T + N +
Sbjct: 702 REAALTKFRLKRKERCFEKKVRYQSRKKLADQRPRVRGQFVKQIVYGTNEENKE 755
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 128/195 (65%), Gaps = 5/195 (2%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
T WE FLP ++VLLV+ DDSTR ++ ALLR CGY V AV +GL AW+ L+ + IDL
Sbjct: 75 TYWERFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDL 134
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
VLTEV +P +SG LL +M H KNIPVIMMS HDS+ +V KC+ KGAADFL+KP+RR
Sbjct: 135 VLTEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRR 194
Query: 151 NELRNLWQHVWRRHSLLGGHVPQNLHDV--YHKGGAIS--ENNMASSHSSDYAASSQKNK 206
NEL+NLWQHVWRR ++ + + K +I +NN SS +DY + +
Sbjct: 195 NELKNLWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSSDENDYGSRGLSVR 254
Query: 207 -GSEKVSDAQSSRTS 220
GS+K S QSS T+
Sbjct: 255 DGSDKGSGTQSSWTT 269
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 47/54 (87%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
R+AALTKFRLKRK+RC++KKVRYQSRK LA+QRPRV+GQFV+Q+ T + N +
Sbjct: 714 REAALTKFRLKRKERCFEKKVRYQSRKKLADQRPRVRGQFVKQIVYGTNEENKE 767
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 105/137 (76%), Gaps = 1/137 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW L+ ++IDLVL
Sbjct: 74 WERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVL 133
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL+ + H +CK+IPVIMMS +DS+SMV KC+ KGA DFL+KP+R+NE
Sbjct: 134 TEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNE 193
Query: 153 LRNLWQHVWRR-HSLLG 168
L+NLWQHVWRR HS G
Sbjct: 194 LKNLWQHVWRRCHSSSG 210
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDA 714
QR+AAL KFRLKRKDR + KKVRYQSRK LAEQRPRV+GQFVRQ + E + A
Sbjct: 710 QREAALNKFRLKRKDRNFGKKVRYQSRKRLAEQRPRVRGQFVRQSEQEDQTA 761
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAW 78
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW
Sbjct: 58 QTDEQKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAW 117
Query: 79 ETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK 138
+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS+ V KC+ K
Sbjct: 118 QCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSK 177
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHVWRR 202
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAW 78
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW
Sbjct: 58 QTDEQKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAW 117
Query: 79 ETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK 138
+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS+ V KC+ K
Sbjct: 118 QCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSK 177
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHVWRR 202
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 710
R+AAL KFR KRK R + KKVRYQSRK LAEQRPR++GQFVRQ E
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAW 78
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW
Sbjct: 58 QTDEQKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAW 117
Query: 79 ETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK 138
+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS+ V KC+ K
Sbjct: 118 QCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSK 177
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHVWRR 202
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 710
R+AAL KFR KRK R + KKVRYQSRK LAEQRPR++GQFVRQ E
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAW 78
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW
Sbjct: 58 QTDEQKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAW 117
Query: 79 ETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK 138
+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS+ V KC+ K
Sbjct: 118 QCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSK 177
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHVWRR 202
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 710
R+AAL KFR KRK R + KKVRYQSRK LAEQRPR++GQFVRQ E
Sbjct: 734 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 780
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAW 78
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW
Sbjct: 58 QTDEQKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAW 117
Query: 79 ETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK 138
+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS+ V KC+ K
Sbjct: 118 QCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSK 177
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHVWRR 202
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 710
R+AAL KFR KRK R + KKVRYQSRK LAEQRPR++GQFVRQ E
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW L+ ++IDLVL
Sbjct: 74 WERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVL 133
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL+ + H +CK+IPVIMMS +DS+SMV KC+ KGA DFL+KP+R+NE
Sbjct: 134 TEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNE 193
Query: 153 LRNLWQHVWRR-HSL 166
L+NLWQHVWRR HS+
Sbjct: 194 LKNLWQHVWRRCHSV 208
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLPR L+VLLVE DDSTR ++SALLR CGY AV +GL AW+ L+ + IDLVL
Sbjct: 80 WERFLPRRSLKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDLTNHIDLVL 139
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL+ +M H C+NIPVIMMS HDS+++V +C+ KGA DFL+KP+R+NE
Sbjct: 140 TEVAMPCLSGIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNE 199
Query: 153 LRNLWQHVWRR 163
L+ LWQHVWRR
Sbjct: 200 LKILWQHVWRR 210
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 157/351 (44%), Gaps = 53/351 (15%)
Query: 389 PHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNN-SKACPTPTSN--SAELKDGS 445
P LEL L++ + ++R+ L HS SAFS YN+ S A PT N S L D
Sbjct: 441 PSLELVLKRLRDTGDAWASANDRNVLRHSDLSAFSRYNSASTAYQAPTGNVGSCSLLDKC 500
Query: 446 SKSDEILSNQ-LSENATGGFQPCCATSSNSRENMTS---------LVMGQ--SEQAAVAF 493
S++ + S Q L N+ + C+ S++ ++ + LV+ + ++ V
Sbjct: 501 SEAAKTESMQNLQSNSNSTPRNLCSNGSSNNNDVGTTTNNAFAKPLVIRDKPTPKSTVKC 560
Query: 494 AGPHLGFIPVPG---VRFDNIFAGY--SHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPI 548
P F PV + + G + I +I G+ N Q +HHR +
Sbjct: 561 LHPSSAFQPVQNDQTLHAQPVIQGKGDAPIANTILAQSRGM------NQQGQVQHHRHCV 614
Query: 549 ---SASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNS 605
++ ++ + + R G N S +G +GS N+S +
Sbjct: 615 HNMPLTIRNDLSLKNMAAAGPRFGSSNMLSTPM------EGNAGNYSMNGSNGQNESCIA 668
Query: 606 GLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRD 665
G+ S+SG + D N + SG+ ++ G F + R+
Sbjct: 669 LNPRGINLESNSGAAGK-DENPGTGDESGS----RSGGGQNCF-------------ALRE 710
Query: 666 AALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
AAL KFR KRK+RC++KKVRYQSRK LAE RPRV+GQFVRQV E KD +A
Sbjct: 711 AALNKFRQKRKERCFEKKVRYQSRKKLAEHRPRVRGQFVRQVPFEHKDEDA 761
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLP L+VLLVE DDSTR ++SALLR CGY V AV +GL AW+ L+ + IDLVL
Sbjct: 83 WERFLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVL 142
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL+ +M H C+NIPVIMMS HDS+++V KC+ KGA DFL+KP+R+NE
Sbjct: 143 TEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNE 202
Query: 153 LRNLWQHVWRR 163
L+ LWQHVWR+
Sbjct: 203 LKILWQHVWRK 213
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%)
Query: 655 GISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDA 714
G+ + R+AAL+KFR KRK+RC++KKVRYQSRK LAEQRPR++GQFVRQV E KD
Sbjct: 703 GVGRNRFALREAALSKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQVGPEHKDE 762
Query: 715 NA 716
+A
Sbjct: 763 DA 764
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 101/133 (75%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
RWE FLP L+VLLVE DDSTR ++SALLR CGY V A +GL AW+ L+ +DL
Sbjct: 87 VRWERFLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKILEDYTTHVDL 146
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
VLTEV +P +SG LL+ +M H CKNIPVIMMS +DS+++V KC+ KGA DFL KP+R+
Sbjct: 147 VLTEVVMPCLSGIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRK 206
Query: 151 NELRNLWQHVWRR 163
NEL+NLWQHVWR+
Sbjct: 207 NELKNLWQHVWRK 219
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 77/128 (60%), Gaps = 12/128 (9%)
Query: 592 LRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCT----- 646
L S GN S+S NG A+ S+ G+ + N S+A + +GT ++ NG
Sbjct: 656 LLSASLEGNAGSHS--LNGSASGSNHGSNGQ---NGSTATLNASGTNMESDNGIAGKGEA 710
Query: 647 --LFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFV 704
+ +GI + R+AAL KFR KRK+RC++KKVRYQSRK LAEQRPRV+GQFV
Sbjct: 711 SGIIGFTSRSGIDPDRVALREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFV 770
Query: 705 RQVKNETK 712
RQV +E +
Sbjct: 771 RQVVHENQ 778
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAW 78
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW
Sbjct: 58 QTDEQKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAW 117
Query: 79 ETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK 138
+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS+ V KC+ K
Sbjct: 118 QCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSK 177
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHVWRR 202
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 213/413 (51%), Gaps = 47/413 (11%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL + + VLLVE+DD TR+++SALLR C Y+V + +G AW L+ + ++ID+VL
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV +P +SG +LL+ +M H++CKNIPVIMMS +D+ + V KC+ KGA DFL+KP+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNE 190
Query: 153 LRNLWQHVWRR-HSLLGGHVPQNLHDV---YHKGGAISENNMASSHSSDYAASSQKN--K 206
L+NLWQHVWRR HS G + KGG S NN S+ S D A N
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 207 GSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNE-CA--KLE 263
S+ S QSS T +E +S ++ L+ S +TC+ + ++E C+ +L
Sbjct: 251 DSDNGSGTQSSWTKC-AVEMDSPQAMSLDQLAD----SPDSTCAQVIHPKSEICSNRRLP 305
Query: 264 TESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKND 323
+ + + GG + L + + + + + D ++M Q
Sbjct: 306 DDFKEKDLEIGGPGN-LYIDHQSSPNERPIKATDGRCEYPPKNNSKESMMQ--------- 355
Query: 324 RINADITYGIHGCNDELIEPSSGAIDLIGTFDNH---QEVPDKLSTPNDGIPDKLSTLHN 380
L +P+ A DLIG+ + QE TPN +P K+ +
Sbjct: 356 ---------------NLEDPTVRAADLIGSMAKNMDTQEAARAADTPN--LPSKVPEGKD 398
Query: 381 RTKKCEFSPHLELSLRKSFP---STSNDQGNDERHTLNHSAASAFSWYNNSKA 430
+ K + P LELSL++S + + +++++ L S SAF+ Y+ S A
Sbjct: 399 KNKHDKILPSLELSLKRSRSCGDGANTVKADEQQNVLRQSNLSAFTRYHTSTA 451
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R A L K+R K+KDR + KKVRYQSRK LA+QRPR +GQFV+Q
Sbjct: 703 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 746
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RWE FLP LRVLLVE DD TR ++ ALLRKCGY V + +GL AW+ L+ + IDLV
Sbjct: 73 RWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLV 132
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEV +P +SG LL+ + H +CK IPVIMMS +DS+S V KC+ KGA DFL+KP+R+N
Sbjct: 133 LTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKN 192
Query: 152 ELRNLWQHVWRR-HSLLG 168
EL+ LWQH+WRR HS G
Sbjct: 193 ELKTLWQHIWRRCHSSSG 210
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
SQR+AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ E + A
Sbjct: 702 SQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAGQA 756
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 104/137 (75%), Gaps = 1/137 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW L+ ++IDLVL
Sbjct: 73 WERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVL 132
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV + +SG LL+ + H +CK+IPVIMMS +DS+SMV KC+ KGA DFL+KP+R+NE
Sbjct: 133 TEVFMTCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNE 192
Query: 153 LRNLWQHVWRR-HSLLG 168
L+NLWQHVWRR HS G
Sbjct: 193 LKNLWQHVWRRCHSSSG 209
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDA 714
QR+AAL KFRLKRKDR + KKVRYQSRK LAEQRPRV+GQFVRQ + E + A
Sbjct: 709 QREAALNKFRLKRKDRNFGKKVRYQSRKRLAEQRPRVRGQFVRQSEQEDQTA 760
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAW 78
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW
Sbjct: 58 QTDEQKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAW 117
Query: 79 ETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK 138
+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS+ V KC+ K
Sbjct: 118 QCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSK 177
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHVWRR 202
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 98/131 (74%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLP ++VLLVE DDSTR ++ ALLR C Y V AV +GL AW+ L+ + IDLVL
Sbjct: 81 WERFLPVRSIKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVL 140
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL +M H KNIPVIMMS HDS+ +V KC+ KGA DFL+KP+RRNE
Sbjct: 141 TEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNE 200
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 201 LKNLWQHVWRR 211
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 654 NGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
NG + R+AALTKFRLKRK+RC++KKVRY SRK LAEQRPR++GQFVR++ +E K+
Sbjct: 707 NGADEGRLALREAALTKFRLKRKERCFEKKVRYHSRKKLAEQRPRIRGQFVRRIVSEGKE 766
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 212/413 (51%), Gaps = 47/413 (11%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL + + VLLVE+DD TR+++SALLR C Y+V + +G AW L+ + ++ID+VL
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV +P +SG +LL+ +M H++CKNIPVIMMS +D+ + V KC+ KGA DFL+ P+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNE 190
Query: 153 LRNLWQHVWRR-HSLLGGHVPQNLHDV---YHKGGAISENNMASSHSSDYAASSQKN--K 206
L+NLWQHVWRR HS G + KGG S NN S+ S D A N
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 207 GSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNE-CA--KLE 263
S+ S QSS T +E +S ++ L+ S +TC+ + ++E C+ +L
Sbjct: 251 DSDNGSGTQSSWTKCA-VEMDSPQAMSLDQLAD----SPDSTCAQVIHPKSEICSNRRLP 305
Query: 264 TESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKND 323
+ + + GG + L + + + + + D ++M Q
Sbjct: 306 DDFKEKDLEIGGPGN-LYIDHQSSPNERPIKATDGRCEYPPKNNSKESMMQ--------- 355
Query: 324 RINADITYGIHGCNDELIEPSSGAIDLIGTFDNH---QEVPDKLSTPNDGIPDKLSTLHN 380
L +P+ A DLIG+ + QE TPN +P K+ +
Sbjct: 356 ---------------NLEDPTVRAADLIGSMAKNMDTQEAARAADTPN--LPSKVPEGKD 398
Query: 381 RTKKCEFSPHLELSLRKSFP---STSNDQGNDERHTLNHSAASAFSWYNNSKA 430
+ K + P LELSL++S + + +++++ L S SAF+ Y+ S A
Sbjct: 399 KNKHDKILPSLELSLKRSRSCGYGANTVKADEQQNVLRQSNLSAFTRYHTSTA 451
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADG 718
R A L K+R K+KDR + KKVRYQSRK LA+QRPR +GQFV+Q + + + G
Sbjct: 703 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQALQDQGEQDGTG 757
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 122/199 (61%), Gaps = 19/199 (9%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLP ++VLLVE DDSTR ++ ALL+ C Y+V AV +GL AW+ L+ + IDLVL
Sbjct: 64 WERFLPLRSIKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVLEDPENGIDLVL 123
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL +M H KNIPVIMMS HDS+ +V KC+ KGA DFL+KP+RRNE
Sbjct: 124 TEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNE 183
Query: 153 LRNLWQHVWRR-----------HSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAAS 201
L+NLWQHVWRR +L +D Y ENN SS +DY +
Sbjct: 184 LKNLWQHVWRRCHSSSGSGSESATLTRKFAKSRSNDAY-------ENNSDSSDENDYGSR 236
Query: 202 SQKNK-GSEKVSDAQSSRT 219
+ GS+ S QSS T
Sbjct: 237 GLSIRDGSDNGSGTQSSWT 255
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 654 NGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
NG + R+AALTKFRLKRK+RC++K+VRY SRK LAEQRPR+KGQFVR++ +E K+
Sbjct: 698 NGTDEVRLALREAALTKFRLKRKERCFEKRVRYHSRKKLAEQRPRIKGQFVRRIVSEGKE 757
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 101/134 (75%)
Query: 30 RTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSID 89
R WE FLP +VLLVE+DDSTR I+SALLRKC Y V VP+G+ AW+ L+ + ID
Sbjct: 84 RVCWERFLPVGSPKVLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSNQID 143
Query: 90 LVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LVLTEV +SG LL+ +M H C+N PVIMMS HDS+ +VLKC+ KGA DFL+KP+R
Sbjct: 144 LVLTEVVTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIR 203
Query: 150 RNELRNLWQHVWRR 163
+NEL+NLWQHVWRR
Sbjct: 204 KNELKNLWQHVWRR 217
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
S+QR+AAL KFRLKRK+RC+DKKVRYQSRK LA+QRPRV+GQFVRQV+ E K N D
Sbjct: 732 SAQREAALNKFRLKRKERCFDKKVRYQSRKKLADQRPRVRGQFVRQVR-ENKGRNTD 787
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 119/194 (61%), Gaps = 6/194 (3%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
RWE FLP L+VLLVE DDSTR ++SALLR C Y V AV +G AW+ L+ + DLV
Sbjct: 64 RWERFLPVRSLKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNNHTDLV 123
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEV +P +SG LL + H +NIPVIMMS HDS+ +V KC+ KGA DFL+KP+R+N
Sbjct: 124 LTEVVMPILSGIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKN 183
Query: 152 ELRNLWQHVWRR----HSLLGGHVPQNLHDVYHKGGAISENNMASSHS-SDYAASSQKNK 206
EL+NLWQHVWRR Q K SENN SS DY ++ N+
Sbjct: 184 ELKNLWQHVWRRCHSSSGSGSESGTQTKKSAKTKSNEESENNSDSSDELGDYGSNGPSNR 243
Query: 207 -GSEKVSDAQSSRT 219
GS+ S QSS T
Sbjct: 244 DGSDNGSGTQSSWT 257
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 19/114 (16%)
Query: 594 HGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGF 653
HGS G SN+ L L N I+ N+++ G G + ++G
Sbjct: 657 HGS-NGQNGSNTALHTELTN---------IESNNTAGANHGAGGMSGRISG--------- 697
Query: 654 NGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
N + +QR+AAL+KFR KRK+RC++K+VRYQSRK LAEQRPRVKGQFVRQ
Sbjct: 698 NAVDEDRLAQREAALSKFRQKRKERCFEKRVRYQSRKRLAEQRPRVKGQFVRQT 751
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 100/134 (74%)
Query: 30 RTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSID 89
R WE FLP +VLLVE+DDSTR I+SALLR C Y V VP+G+ AW+ L+ + ID
Sbjct: 84 RVCWERFLPVGSPKVLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSNQID 143
Query: 90 LVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LVLTEV +SG LL+ +M H C+N PVIMMS HDS+ +VLKC+ KGA DFL+KP+R
Sbjct: 144 LVLTEVVTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIR 203
Query: 150 RNELRNLWQHVWRR 163
+NEL+NLWQHVWRR
Sbjct: 204 KNELKNLWQHVWRR 217
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
S+QR+AAL KFRLKRK+RC+DKKVRYQSRK LA+QRPRV+GQFVRQV+ E K N D
Sbjct: 732 SAQREAALNKFRLKRKERCFDKKVRYQSRKKLADQRPRVRGQFVRQVR-ENKGRNTD 787
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE F+ + ++VLLVE+DDSTRQ++SALLR C Y V +G AW L+ +SIDLVL
Sbjct: 52 WERFIQKKTIKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 111
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ +M H++CKNIPVIMMS +D++ V KC+ KGA DFL+KP+R+NE
Sbjct: 112 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 171
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 172 LKNLWQHVWRR 182
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 100/131 (76%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLP L+VLLVE DDSTR +++ALLR C Y V AV +GL AW+ L+ +++D+VL
Sbjct: 68 WERFLPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDIVL 127
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +PS+SG LL +M H K IPVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 128 TEVVMPSLSGIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 187
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 188 LKNLWQHVWRR 198
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 44/57 (77%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADG 718
+QR AALTKFR KRK RC+ KKVRYQSRK LAEQRPR++GQF++ + D ADG
Sbjct: 561 AQRVAALTKFRQKRKQRCFQKKVRYQSRKKLAEQRPRIRGQFIKHTXCDHTDHEADG 617
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 215/415 (51%), Gaps = 49/415 (11%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL + + VLLVE+DD TR+++SALLR C Y+V + +G AW L+ + ++ID+VL
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV +P +SG +LL+ +M H++CKNIPVIMMS +D+ + V KC+ KGA DFL+KP+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNE 190
Query: 153 LRNLWQHVW-RRHSLLGGHVPQNLHDVY---HKGGAISENNMASSHS----SDYAASSQK 204
L+NLWQHVW R HS G + KGG S NN S+ S +D +++
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 205 NKGSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNE-CA--K 261
+ + + AQSS T +E +S ++ L+ S +TC+ + ++E C+ +
Sbjct: 251 DSDNGSGTQAQSSWTKCA-VEMDSPQAMSLDQLAD----SPDSTCAQVIHPKSEICSNRR 305
Query: 262 LETESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPK 321
L + + + GG + L + + + + + D ++M Q
Sbjct: 306 LPDDFKEKDLEIGGPGN-LYIDHQSSPNERPIKATDGRCEYPPKNNSKESMMQ------- 357
Query: 322 NDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNH---QEVPDKLSTPNDGIPDKLSTL 378
L +P+ A DLIG+ + QE TPN +P K+
Sbjct: 358 -----------------NLEDPTVRAADLIGSMAKNMDTQEAARAADTPN--LPSKVPEG 398
Query: 379 HNRTKKCEFSPHLELSLRKSFP---STSNDQGNDERHTLNHSAASAFSWYNNSKA 430
++ K + P LELSL++S + + +++++ L S SAF+ Y+ S A
Sbjct: 399 KDKNKHDKILPSLELSLKRSRSCGDGANTVKADEQQNVLRQSNLSAFTRYHTSTA 453
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R A L K+R K+KDR + KKVRYQSRK LA+QRPR +GQFV+Q
Sbjct: 705 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 748
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 215/415 (51%), Gaps = 35/415 (8%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL + + VLLVE+DD TR+++SALLR C Y+V + +G AW L+ + ++ID+VL
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV +P +SG +LL+ +M H++CKNIPVIMMS +D+ + V KC+ KGA DFL+KP+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNE 190
Query: 153 LRNLWQHVW-RRHSLLGGHVPQNLHDVY---HKGGAISENNMASSHS----SDYAASSQK 204
L+NLWQHVW R HS G + KGG S NN S+ S +D +++
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 205 NKGSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLET 264
+ + + AQSS T +E +S ++ L+ S +TC+ + ++E +
Sbjct: 251 DSDNGSGTQAQSSWTKCA-VEMDSPQAMSLDQLAD----SPDSTCAQVIHPKSEIC---S 302
Query: 265 ESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGE---GPK 321
+P + + ++ E+ + + + + +G PK
Sbjct: 303 NRRLPGTSNRNCMKQKYTNDDFKEKDLEIGGPGNLYIDHQSSPNERPIKATDGRCEYPPK 362
Query: 322 NDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNH---QEVPDKLSTPNDGIPDKLSTL 378
N+ + + L +P+ A DLIG+ + QE TPN +P K+
Sbjct: 363 NNSKESMM--------QNLEDPTVRAADLIGSMAKNMDTQEAARAADTPN--LPSKVPEG 412
Query: 379 HNRTKKCEFSPHLELSLRKSFP---STSNDQGNDERHTLNHSAASAFSWYNNSKA 430
++ K + P LELSL++S + + +++++ L S SAF+ Y+ S A
Sbjct: 413 KDKNKHDKILPSLELSLKRSRSCGDGANTVKADEQQNVLRQSNLSAFTRYHTSTA 467
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R A L K+R K+KDR + KKVRYQSRK LA+QRPR +GQFV+Q
Sbjct: 719 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 762
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE F+ + ++VLLV++DDSTRQ++SALLR C Y V +G AW L+ +SIDLVL
Sbjct: 52 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 111
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ +M H++CKNIPVIMMS +D++ V KC+ KGA DFL+KP+R+NE
Sbjct: 112 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 171
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 172 LKNLWQHVWRR 182
>gi|327342126|gb|AEA50850.1| aprr5 [Populus tremula]
Length = 412
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 222/435 (51%), Gaps = 65/435 (14%)
Query: 290 GSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADITYGIHGCND--ELIEPSSGA 347
GS A C+D+ ++ D K + G G R+ A+I I GC+ L A
Sbjct: 17 GSATAVCEDSDKITVD----KEITPGSG------RMTANI--AIEGCDKIGALANSPREA 64
Query: 348 IDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRTKKCEFSPHLELSLRKSFPSTSNDQG 407
ID +G NH S+ +N SPHL+LSLR+S PS Q
Sbjct: 65 IDFMGASTNH------------------SSFNNVEIHFGSSPHLDLSLRRSHPSGFETQV 106
Query: 408 NDERHTLNHSAASAFSWYNNSKACP-TPTSNSAELKDGSSKSDEILSNQLSENATGGFQP 466
+ERHTL HS ASAF + N + P + +N+ ++ + D +S N G
Sbjct: 107 TEERHTLQHSNASAFMYTNRASQLPHSALANTGNQEEFRANYD----GNISSNVNGYNSD 162
Query: 467 CCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGF----IPVPGVRFDNIFAGYSHIFPSI 522
+ + ++R + SL GQ+++ + + IPV RF+N+ Y + P I
Sbjct: 163 ALSLAPSTRRSAISLAAGQTKEYEIVTSSSGEKVFPIHIPVKDTRFNNLCNSYGAVLPPI 222
Query: 523 FYTKSGLQPAWSPNSSHQKE--HHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTV 580
F +S L P S +S+ QKE H P + + V Q+ R G+ ++S++ ++
Sbjct: 223 FCKQSDLSPMMSQSSASQKEPIHKVNPFQCCNYGSTSV----QLCDRLGQNANDSINGSL 278
Query: 581 CEQ-SKGRPLEQLRHGSPAGNQSSNSGLCNGLANN-------SSSGTYSRIDRNSSSAKA 632
+Q +K LE H S A +QS++S CNG A++ S+SG+YS D+ ++ A
Sbjct: 279 QKQENKLDSLEGREHISSATDQSASSSFCNGAASHFNSIGYGSASGSYSNADQIANVRAA 338
Query: 633 SGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSL 692
S + +N G +F H+ ++ S +R+AALTKFRLKRK+RCY+KKVRY+SRK L
Sbjct: 339 SES----KNEEG--VFTHNS----NSHQSIRREAALTKFRLKRKERCYEKKVRYESRKKL 388
Query: 693 AEQRPRVKGQFVRQV 707
AEQRPRVKGQFVRQV
Sbjct: 389 AEQRPRVKGQFVRQV 403
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE F+ + ++VLLV++DDSTRQ++SALLR C Y V +G AW L+ +SIDLVL
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ +M H++CKNIPVIMMS +D++ V KC+ KGA DFL+KP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 725
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE F+ + ++VLLV++DDSTRQ++SALLR C Y V +G AW L+ +SIDLVL
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ +M H++CKNIPVIMMS +D++ V KC+ KGA DFL+KP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE F+ + ++VLLV++DDSTRQ++SALLR C Y V +G AW L+ +SIDLVL
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ +M H++CKNIPVIMMS +D++ V KC+ KGA DFL+KP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 725
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 97/131 (74%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE +LP L+VLLVE DDSTR I++ALL+ C Y V AVPD L AW+ L+ IDLVL
Sbjct: 55 WERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVLEDENSCIDLVL 114
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P SG LL+ +M H KNIPVIMMS HDS+ +V KC+ GA DFL+KP+R+NE
Sbjct: 115 TEVVMPVNSGTGLLSKIMSHQTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNE 174
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 175 LKNLWQHVWRR 185
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 44/47 (93%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
++QR+AAL KFRLKRK+RC++KKVRY SRK LAEQRPR+KGQF+R++
Sbjct: 423 AAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPRIKGQFIRKM 469
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE F+ + ++VLLV++DDSTRQ++SALLR C Y V +G AW L+ +SIDLVL
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ +M H++CKNIPVIMMS +D++ V KC+ KGA DFL+KP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 725
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYR----------- 67
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y
Sbjct: 58 QTDEQKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFP 117
Query: 68 VAAVP--DGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSL 125
A +P +GL AW+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS
Sbjct: 118 SAVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSS 177
Query: 126 HDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+DS+ V KC+ KGA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 NDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 215
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 710
R+AAL KFR KRK R + KKVRYQSRK LAEQRPR++GQFVRQ E
Sbjct: 725 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 771
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 214/415 (51%), Gaps = 49/415 (11%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL + + VLLVE+DD TR+++SALLR C Y+V + +G AW L+ + ++ID+VL
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV +P +SG +LL+ +M H++CKNIPVIMMS +D+ + V KC+ KGA DFL+ P+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNE 190
Query: 153 LRNLWQHVW-RRHSLLGGHVPQNLHDVY---HKGGAISENNMASSHS----SDYAASSQK 204
L+NLWQHVW R HS G + KGG S NN S+ S +D +++
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 205 NKGSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNE-CA--K 261
+ + + AQSS T +E +S ++ L+ S +TC+ + ++E C+ +
Sbjct: 251 DSDNGSGTQAQSSWTKCA-VEMDSPQAMSLDQLAD----SPDSTCAQVIHPKSEICSNRR 305
Query: 262 LETESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPK 321
L + + + GG + L + + + + + D ++M Q
Sbjct: 306 LPDDFKEKDLEIGGPGN-LYIDHQSSPNERPIKATDGRCEYPPKNNSKESMMQ------- 357
Query: 322 NDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNH---QEVPDKLSTPNDGIPDKLSTL 378
L +P+ A DLIG+ + QE TPN +P K+
Sbjct: 358 -----------------NLEDPTVRAADLIGSMAKNMDTQEAARAADTPN--LPSKVPEG 398
Query: 379 HNRTKKCEFSPHLELSLRKSFP---STSNDQGNDERHTLNHSAASAFSWYNNSKA 430
++ K + P LELSL++S + + +++++ L S SAF+ Y+ S A
Sbjct: 399 KDKNKHDKILPSLELSLKRSRSCGYGANTVKADEQQNVLRQSNLSAFTRYHTSTA 453
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADG 718
R A L K+R K+KDR + KKVRYQSRK LA+QRPR +GQFV+Q + + + G
Sbjct: 705 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQALQDQGEQDGTG 759
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 214/415 (51%), Gaps = 35/415 (8%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL + + VLLVE+DD TR+++SALLR C Y+V + +G AW L+ + ++ID+VL
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV +P +SG +LL+ +M H++CKNIPVIMMS +D+ + V KC+ KGA DFL+ P+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNE 190
Query: 153 LRNLWQHVW-RRHSLLGGHVPQNLHDVY---HKGGAISENNMASSHS----SDYAASSQK 204
L+NLWQHVW R HS G + KGG S NN S+ S +D +++
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 205 NKGSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLET 264
+ + + AQSS T +E +S ++ L+ S +TC+ + ++E +
Sbjct: 251 DSDNGSGTQAQSSWTKCA-VEMDSPQAMSLDQLAD----SPDSTCAQVIHPKSEIC---S 302
Query: 265 ESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGE---GPK 321
+P + + ++ E+ + + + + +G PK
Sbjct: 303 NRRLPGTSNRNCMKQKYTNDDFKEKDLEIGGPGNLYIDHQSSPNERPIKATDGRCEYPPK 362
Query: 322 NDRINADITYGIHGCNDELIEPSSGAIDLIGTFDNH---QEVPDKLSTPNDGIPDKLSTL 378
N+ + + L +P+ A DLIG+ + QE TPN +P K+
Sbjct: 363 NNSKESMM--------QNLEDPTVRAADLIGSMAKNMDTQEAARAADTPN--LPSKVPEG 412
Query: 379 HNRTKKCEFSPHLELSLRKSFP---STSNDQGNDERHTLNHSAASAFSWYNNSKA 430
++ K + P LELSL++S + + +++++ L S SAF+ Y+ S A
Sbjct: 413 KDKNKHDKILPSLELSLKRSRSCGYGANTVKADEQQNVLRQSNLSAFTRYHTSTA 467
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R A L K+R K+KDR + KKVRYQSRK LA+QRPR +GQFV+Q
Sbjct: 719 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 762
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 100/131 (76%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FLP L+VLLVE DDSTR +++ALLR C Y V AV +GL AW+ L+ +++D+VL
Sbjct: 68 WERFLPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDIVL 127
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +PS++G LL +M H K IPVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 128 TEVVMPSLTGIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 187
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 188 LKNLWQHVWRR 198
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 581 CEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQ 640
C++++ P + P G+ + ++GL + N S + S+A T +
Sbjct: 479 CDRNQMAPKKIASVAKPCGSSNMDNGLADTNLGNYSMNVSISGSHHGSNAPNGRTNIESE 538
Query: 641 N-------LNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLA 693
N GC +G+ +QR AALTKFR KRK RC+ KKVRYQSRK LA
Sbjct: 539 NGLTEKTEAAGCNGSGTGSGSGMDESRFAQRVAALTKFRQKRKQRCFQKKVRYQSRKKLA 598
Query: 694 EQRPRVKGQFVRQVKNETKDANAD 717
EQRPR++GQF + + D AD
Sbjct: 599 EQRPRIRGQFAKHTAHNHADHEAD 622
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 97/131 (74%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL L+VLLVE DDSTR +++ALLR C Y V A +GL AW+ L+ + IDLVL
Sbjct: 80 WERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVL 139
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL +M H KNIPVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 140 TEVVMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 199
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 200 LKNLWQHVWRR 210
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 46/57 (80%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADG 718
SQR+AALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVRQ ++ DG
Sbjct: 738 SQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQNTSDNTSNAGDG 794
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 96/131 (73%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL L+VLLVE DDSTR +++ALLR C Y V +GL AW+ L+ + IDLVL
Sbjct: 70 WERFLHIRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVL 129
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL +M H KNIPV+MMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 130 TEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 189
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 190 LKNLWQHVWRR 200
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 155/373 (41%), Gaps = 58/373 (15%)
Query: 374 KLSTLHNR-TKKCEFSPHLELSLRKSFPSTSNDQG-NDERHTLNHSAASAFSWYN---NS 428
K S + N+ T E P LELSL++ D D+R+ L S SAFS YN N+
Sbjct: 388 KSSDIENKGTNNDEELPSLELSLKRLRGVEDADITIQDDRNVLRRSDQSAFSRYNAASNT 447
Query: 429 KACPT-------PTSNSAELKDGSSKSD---EILSNQLSENATGGFQPCCATSSNSRENM 478
K PT P +NS E+ S D N ++N+ G S+ +
Sbjct: 448 KKSPTGCVGSNSPYNNSLEVTKKDSSRDIQSHSCGNPPNQNSNGASNNIDMGSTTNNAYA 507
Query: 479 TSLVMGQSEQAAVAFAGPHL-GFIPVPG--------VRFDNIFAGYSHIF--PSIFYTKS 527
S VM + A+ F PV V +N + I P + K
Sbjct: 508 KSAVMSEPAGASTTKCLYQTSAFQPVKNSLVCTSQQVVLNNTEDMSATILAPPKLDRHKD 567
Query: 528 GLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGR 587
+ + E+H H P HD+E + H C S
Sbjct: 568 SAALDFHLHC----ENHNCIADNMKHQLPPDHDAESIKKMATAAPH-------CGSSN-- 614
Query: 588 PLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTL 647
+E++ GN S N + +NN S+G +N SS + GT ++ NG T
Sbjct: 615 -VEEVLVEGNVGNHSINRSVSG--SNNGSNG------QNGSSTAVNAGGTNTESNNGLTG 665
Query: 648 FIHDGF-------NGISARHSSQRDAALTKFRLKRKDR---CYDKKVRYQSRKSLAEQRP 697
G N + +SQR+ ALTKFR KRK+R C+ KKVRYQSRK LAEQRP
Sbjct: 666 NSGSGDASGSGSANRVDQNKTSQREVALTKFRQKRKERRERCFHKKVRYQSRKRLAEQRP 725
Query: 698 RVKGQFVRQVKNE 710
R +GQFVRQ NE
Sbjct: 726 RFRGQFVRQTSNE 738
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 96/131 (73%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL L+VLLVE DDSTR +++ALLR C Y V +GL AW+ L+ + IDL+L
Sbjct: 72 WERFLHIRSLKVLLVEYDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLIL 131
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL +M H KNIPV+MMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 132 TEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 191
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 192 LKNLWQHVWRR 202
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 158/374 (42%), Gaps = 60/374 (16%)
Query: 374 KLSTLHNR-TKKCEFSPHLELSLRKSFPSTSNDQG---NDERHTLNHSAASAFSWYN--- 426
K S + N+ T E P LELSL++ D G D+R+ L S SAFS YN
Sbjct: 390 KSSDIENKDTNNDEELPSLELSLKR--LRGVEDAGIAIQDDRNVLRRSDQSAFSRYNAAL 447
Query: 427 NSKACPT-------PTSNSAELKDGSSKSD---EILSNQLSENATGGFQPCCATSSNSRE 476
N K PT P +NS E+ S D N ++N+ G S+ +
Sbjct: 448 NPKKSPTGCVGSNSPHNNSLEVTKKDSSHDIQSHSSGNPPNQNSNGASNNIDMGSTTNNA 507
Query: 477 NMTSLVMGQSEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIF--PSIFYTKSGLQP--- 531
S V+ + AVA L +N+ + + T + L P
Sbjct: 508 YAKSAVI---SEPAVASTTKCLYQTSAYQPEKNNLVCTSQQVVLHNTEDTTATMLAPPKL 564
Query: 532 -----AWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKG 586
+ +P+ E+H H P HD+E + H C S
Sbjct: 565 DRHKDSAAPDFHLHCENHNCIADNMKHQLPPDHDAESIKKMATAAPH-------CGSSNA 617
Query: 587 RPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCT 646
+E L G+ GN S N +NN S+G +N SS + GT ++ NG T
Sbjct: 618 --VEVLVEGN-VGNHSINRSASG--SNNGSNG------QNGSSTAVNAGGTNMKSNNGLT 666
Query: 647 LFIHDG-------FNGISARHSSQRDAALTKFRLKRKDR---CYDKKVRYQSRKSLAEQR 696
G N + +SQR+AALTKFR KRK+R C+ KKVRYQSRK LAEQR
Sbjct: 667 GNSGSGDASGSVSANRVDQNKTSQREAALTKFRQKRKERRERCFHKKVRYQSRKRLAEQR 726
Query: 697 PRVKGQFVRQVKNE 710
PR +GQFVRQ NE
Sbjct: 727 PRFRGQFVRQSSNE 740
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 96/131 (73%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL L+VLLVE DDSTR +++ALL C Y V A +GL AW+ L+ + IDLVL
Sbjct: 80 WERFLHLRSLKVLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKMLEDLTNHIDLVL 139
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL +M H KNIPVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 140 TEVVMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 199
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 200 LKNLWQHVWRR 210
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 42/45 (93%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
SQR+AALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 738 SQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQ 782
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 100/131 (76%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE ++ + ++RVLLVE DDSTRQI++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 12 WEHYIHKKIIRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARLQDMQDNIDLVL 71
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
+EV +P +SG +LL +M H+VCK+IPVIMMS +D++ V KC+ GA DFL+KP+R+NE
Sbjct: 72 SEVVMPGLSGISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNE 131
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 132 LKNLWQHVWRR 142
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 655 GISARHSS-------QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
GI R SS R AA+TKFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 593 GIDKRSSSIMYMKRELRVAAVTKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 651
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 118/191 (61%), Gaps = 7/191 (3%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL +RVLLVE DDSTR +++ALLR C Y V +GL AW+ L+ + IDLVL
Sbjct: 75 WERFLHVRSVRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIENRIDLVL 134
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG ALL +M H KN+PV+MMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 135 TEVVMPCVSGIALLFKIMSHKSRKNVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 194
Query: 153 LRNLWQHVWRR----HSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKN--K 206
L+NLWQH+WRR Q V K A S NN + S+ +Y S N
Sbjct: 195 LKNLWQHLWRRCHSSCGSGSESGTQTQKSVKSKNAAKSGNN-SGSNDEEYNGSPALNLED 253
Query: 207 GSEKVSDAQSS 217
GS+ S QSS
Sbjct: 254 GSDHGSGTQSS 264
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 594 HGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGF 653
+GS +G+ ++G NG ++ +++G + +N + K+ + + +
Sbjct: 628 NGSASGSNYGSNGP-NGSSSGANAGIMNMESKNGAGGKSGSGDASGNGSGRGSGNVQNSG 686
Query: 654 NGISARHSSQRDAALTKFRLKRKDRCYDKKVR 685
+ + +QR+ ALTKFR KRK+RC+ +KVR
Sbjct: 687 SKVDHSKLAQRETALTKFRQKRKERCFKRKVR 718
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 94/131 (71%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL L+VLLVE D STR +++ALLR C Y V +GL AW L+ + IDLVL
Sbjct: 79 WERFLHLGSLKVLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQIDLVL 138
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL +M H KN+PVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 139 TEVVMPCLSGIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 198
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 199 LKNLWQHVWRR 209
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
SQR+ ALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVRQ N
Sbjct: 706 SQREVALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQTGN 753
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 104/131 (79%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL + L VLLVE+DDSTRQ++SALLR C Y+V + +G AW L+ + ++IDLVL
Sbjct: 42 WERFLLKETLNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYLEDKRNNIDLVL 101
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ +M H++CKNIPVIMMS D++S V KC+ KGA DFL+KP+R+NE
Sbjct: 102 TEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKNE 161
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWR+
Sbjct: 162 LKNLWQHVWRQ 172
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 96/131 (73%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE+ P L+VLLVE DDSTR +++ALLR CGY+V +GL AW L R IDLVL
Sbjct: 33 WENLPPYRQLKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLLDDRNREIDLVL 92
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+V +P +SG LL+ +M H + +PV+MMS HDS ++V KC+ KGAADFL+KPVR+NE
Sbjct: 93 TDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKNE 152
Query: 153 LRNLWQHVWRR 163
L+NLWQH WR+
Sbjct: 153 LKNLWQHAWRK 163
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 22/116 (18%)
Query: 599 GNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTV-------PQNLNGCTLFIHD 651
GN S SG +N+ S+ Y N S+AK S G+ P + N C +
Sbjct: 535 GNNGSVSG-----SNHGSNNVY-----NDSTAKMSNFGSCCNGGDSNPGS-NNCGAPAEN 583
Query: 652 GFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
N R R+AAL KFR KRK+RC++KKVRYQSRK LAEQRPRV+GQFV Q
Sbjct: 584 AANNSKVR----REAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRVRGQFVSQA 635
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL+ +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 620 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 663
>gi|357472487|ref|XP_003606528.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355507583|gb|AES88725.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 830
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 128/230 (55%), Gaps = 39/230 (16%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
T WE FLP ++VLLV+ DDSTR ++ ALLR CGY V AV +GL AW+ L+ + IDL
Sbjct: 78 TYWEKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDL 137
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVI----------------------------- 121
VLTE+ +P ++G LL +M H KNIPVI
Sbjct: 138 VLTEIAMPFVTGIGLLCKIMSHKTLKNIPVISKCHSKPKLCTIFLCILIIAHLVFWCTEH 197
Query: 122 -----MMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLH 176
+MS HDS+ +V KC+ KGAADFL+KP+RRNEL+NLWQHVWRR ++
Sbjct: 198 IEMYAVMSCHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWRRCHSSSDSGSESGT 257
Query: 177 DV--YHKGGAIS--ENNMASSHSSDYAASS-QKNKGSEKVSDAQSSRTSS 221
+ + K +I +NN SS +DY + GS+K S QSS T++
Sbjct: 258 NTRKFAKSRSICAFDNNTGSSDENDYGSRGLSVQDGSDKGSGTQSSWTTN 307
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 44/48 (91%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNET 711
R+AALTKFR KRK+RC+DKKVRY SRK LA+QRPRV+GQFV+Q+ ++T
Sbjct: 755 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQIVSDT 802
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 620 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 663
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 620 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 663
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 621 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 621 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 621 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 620 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 663
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 623 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 666
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 621 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 623 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 666
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 621 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 623 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 666
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 96/131 (73%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL +RVLLVE DD TR I++ALLR C Y V V +G+ AW+ L+ + ID+VL
Sbjct: 75 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVL 134
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL ++ H +NIPVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 135 TEVVMPYLSGISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 194
Query: 153 LRNLWQHVWRR 163
L+ LWQHVWRR
Sbjct: 195 LKILWQHVWRR 205
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
SQR+AALTKFR +RK+RC+ KKVRYQSRK LAEQRPRV+GQFVR+ T D
Sbjct: 668 SQREAALTKFRQRRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDD 719
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 622 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 665
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 23 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 82
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 83 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 142
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 143 ELKNLWAHVWRR 154
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 649 IHDGFNGISARHS------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+H GI R + +R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQ
Sbjct: 589 VHAETGGIDKRSNMMHMKRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQ 648
Query: 703 FVRQ 706
FVRQ
Sbjct: 649 FVRQ 652
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 624 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 23 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 82
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 83 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 142
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 143 ELKNLWAHVWRR 154
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Query: 649 IHDGFNGISARHS------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+H GI R + +R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQ
Sbjct: 587 VHAETGGIDKRSNMMHMKRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQ 646
Query: 703 FVR 705
FVR
Sbjct: 647 FVR 649
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 23 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 82
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 83 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 142
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 143 ELKNLWAHVWRR 154
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Query: 649 IHDGFNGISARHS------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+H GI R + +R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQ
Sbjct: 587 VHAETGGIDKRSNMMHMKRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQ 646
Query: 703 FVR 705
FVR
Sbjct: 647 FVR 649
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 116/172 (67%), Gaps = 4/172 (2%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL + + VLLVE+DD TR+++SALLR C Y+V + +G AW L+ + ++ID+VL
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV +P +SG +LL+ +M H++CKNIPVIMMS +D+ + V KC+ KGA DFL+ P+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNE 190
Query: 153 LRNLWQHVWRR-HSLLGGHVPQNLHDV---YHKGGAISENNMASSHSSDYAA 200
L+NLWQHVWRR HS G + KGG S NN S+ S D A
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEA 242
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 668
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 22 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 81
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 82 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 141
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 142 ELKNLWAHVWRR 153
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 610 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 22 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 81
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 82 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 141
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 142 ELKNLWAHVWRR 153
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 610 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 22 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 81
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 82 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 141
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 142 ELKNLWAHVWRR 153
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 610 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V V +G AW L+ +IDLVL
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 625 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 668
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 649 IHDGFNGISARHS------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+H GI R + +R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQ
Sbjct: 590 VHAETGGIDKRSNMMHMKRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQ 649
Query: 703 FVRQ 706
FVRQ
Sbjct: 650 FVRQ 653
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 649 IHDGFNGISARHS------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+H GI R + +R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQ
Sbjct: 593 VHAETGGIDKRSNMMHMKRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQ 652
Query: 703 FVRQ 706
FVRQ
Sbjct: 653 FVRQ 656
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 649 IHDGFNGISARHS------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+H GI R + +R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQ
Sbjct: 590 VHAETGGIDKRSNMMHMKRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQ 649
Query: 703 FVRQ 706
FVRQ
Sbjct: 650 FVRQ 653
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 649 IHDGFNGISARHS------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+H GI R + +R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQ
Sbjct: 590 VHAETGGIDKRSNMMHMKRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQ 649
Query: 703 FVRQ 706
FVRQ
Sbjct: 650 FVRQ 653
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 649 IHDGFNGISARHS------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+H GI R + +R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQ
Sbjct: 593 VHAETGGIDKRSNMMHMKRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQ 652
Query: 703 FVRQ 706
FVRQ
Sbjct: 653 FVRQ 656
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 649 IHDGFNGISARHS------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+H GI R + +R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQ
Sbjct: 593 VHAETGGIDKRSNMMHMKRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQ 652
Query: 703 FVRQ 706
FVRQ
Sbjct: 653 FVRQ 656
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 110/155 (70%), Gaps = 4/155 (2%)
Query: 9 SSEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRV 68
S+ GM E E+ G S WE FLP LRV+LVE DDSTRQ++SALLRKC Y V
Sbjct: 51 SAPPGMQQVDEQEQQGQS----IHWERFLPVKTLRVMLVENDDSTRQVVSALLRKCCYEV 106
Query: 69 AAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDS 128
+G AW L+ ++IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS
Sbjct: 107 IPAENGSHAWRYLEDLQNNIDLVLTEVFMPCLSGIGLLSKITSHKICKDIPVIMMSSNDS 166
Query: 129 ISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+SMV KC+ KGA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 167 MSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRR 201
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 152/358 (42%), Gaps = 62/358 (17%)
Query: 387 FSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKAC----------PTPTS 436
+PH EL L++ + D+ +DER+ L S SAF+ Y+ S A +P
Sbjct: 435 VTPH-ELGLKRLRTDGAADEIHDERNILKRSDQSAFTRYHTSVASNQGGARCGESSSPQD 493
Query: 437 NSAE-LKDGS-----SKSDEIL----SNQLSENATGG-FQPCCATSSNSRENMTSLVMGQ 485
NS+E +K S S SD SN S N G + A S +RE +TS +
Sbjct: 494 NSSEAVKTDSTCKMKSNSDAAPIKQGSNGSSNNDVGSSTKNVIAKPSANRERVTSPSAIK 553
Query: 486 SEQAAVAFAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHR 545
S Q A AF P V D G S+ SH E
Sbjct: 554 STQHASAFHTIQNQTSPANLVGKDKADEGISNAV----------------KMSHPTE--- 594
Query: 546 FPISASVHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQSK--GRPLEQLRHGSPAGNQSS 603
P S H + + + + I+ S D C S P+E A N S
Sbjct: 595 VPQSCVQHHHHVHYYLHVMTQKQSSIDRGSSD-VQCGSSNVFDPPVE-----GHAANYSV 648
Query: 604 NSGL------CNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNL-NGCTLFIHDGFNGI 656
N G+ CNG S+ +R + S + GTV QN+ G + N +
Sbjct: 649 NGGVSVGHNGCNGQNGTSTVPNIARPNIESVN------GTVSQNIAGGGIVSGSGSGNDV 702
Query: 657 SARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDA 714
QR+AAL KFRLKRKDR + KKVRYQSRK LAEQRPRV+GQFVRQ E + A
Sbjct: 703 YQNRFPQREAALNKFRLKRKDRNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDQAA 760
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPV+MMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 96/131 (73%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL +RVLLVE DD TR I++ALLR C Y V +G+ AW+ L+ + ID+VL
Sbjct: 76 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVL 135
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ ++ H +NIPVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 136 TEVIMPYLSGISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 195
Query: 153 LRNLWQHVWRR 163
L+ LWQHVWRR
Sbjct: 196 LKILWQHVWRR 206
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 45/52 (86%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
SQR+AALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVR++ T D
Sbjct: 673 SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKIAAATDD 724
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 95/131 (72%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL +RVLLVE DD TR I++ALLR C Y V V +G+ AW+ L+ + ID+VL
Sbjct: 86 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVL 145
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL ++ H +NIPVIMMS HDS+ ++ KC+ KGA DFL+KP+R+NE
Sbjct: 146 TEVVMPYLSGVGLLCKILNHKSRRNIPVIMMSSHDSMGLIFKCLSKGAVDFLVKPIRKNE 205
Query: 153 LRNLWQHVWRR 163
L+ LWQHVWRR
Sbjct: 206 LKILWQHVWRR 216
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 45/52 (86%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
SQR+AALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVR+ + T D
Sbjct: 665 SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTADATND 716
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ++ ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 22 WEEFLHRKTIRVLLVETDDSTRQVVIALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 81
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 82 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 141
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 142 ELKNLWAHVWRR 153
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 610 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TE+ + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEMFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKV YQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVHYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TE+ + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEMFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKV YQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVHYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TE+ + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEMFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TE+ + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEMFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 95/131 (72%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL +RVLLVE DD TR I++ALLR C Y V V +G+ AW+ L+ + ID+VL
Sbjct: 65 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVL 124
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG LL ++ H +NIPVIMMS HDS+ +V KC+ KGA DFL+KP+R+NE
Sbjct: 125 TEVVMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 184
Query: 153 LRNLWQHVWRR 163
L+ LWQHVWRR
Sbjct: 185 LKILWQHVWRR 195
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
SQR+AALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVR+ T D
Sbjct: 644 SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDD 695
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WESFL + LR+LLVE DD+TR ++ ALLR C Y V AV +G AW L+ + DLVL
Sbjct: 3 WESFLLKRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVL 62
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+V +P +SG LL+ +M+ + C+ +P+++MS +DS+ +V +C+ KGA D+L+KPVR+NE
Sbjct: 63 TDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNE 122
Query: 153 LRNLWQHVWRR-HSL 166
LRNLWQHVWR+ HSL
Sbjct: 123 LRNLWQHVWRKCHSL 137
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 595 GSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFN 654
GS G S+ +G NG N S+SG+ + ++ + + NG H +
Sbjct: 298 GSSNGYGSTGNG--NGSMNGSASGSNTGVNNGQNGLVVTPMANANSGNNGVG-GTHPAMD 354
Query: 655 GISARHS--------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
G+S + ++R+AAL KFR KRK+RC++KKVRYQSRK LAEQRPRV+G FVRQ
Sbjct: 355 GVSGGNGLCTEQIRFARREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGLFVRQ 414
Query: 707 VKNETKDANAD 717
++ +A+
Sbjct: 415 AAHDPSAGDAE 425
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 94/128 (73%)
Query: 37 LPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
L M RVLLVE DDSTR +I ALLR CGY+V +GL AW LK + IDLVLTEV
Sbjct: 53 LVLMKSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDTSNHIDLVLTEVN 112
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
LP +SG ALL +M H KNIPVIMMS HDS ++VLKC+ KGA DFL+KPVR+NEL+ L
Sbjct: 113 LPRLSGIALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELKFL 172
Query: 157 WQHVWRRH 164
WQH+WRR
Sbjct: 173 WQHIWRRR 180
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 10 SEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVA 69
S GG+ I L + + WE FL +RVLLVE DD TR I++ALLR C Y V
Sbjct: 51 SSGGLQIPLSQQTAAT-----VCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVV 105
Query: 70 AVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSI 129
+G+ AW+ L+ + ID+VLTEV +P +SG LL ++ H +NIPVIMMS HDS+
Sbjct: 106 EASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSM 165
Query: 130 SMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+V KC+ KGA DFL+KP+R+NEL+ LWQHVWRR
Sbjct: 166 GLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRR 199
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
SQR+AALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVR+ T D
Sbjct: 667 SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDD 718
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDST+Q+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTQQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS H+S+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAA+FL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 616 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+ +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQFIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 22 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 81
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HD + VL C+ GAADFL KP+R+N
Sbjct: 82 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKN 141
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 142 ELKNLWAHVWRR 153
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 610 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 110/181 (60%), Gaps = 4/181 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L+VLLVE DDSTR +++ALLR CGY V GL AWE L+ R S+DLVLT++ +P +S
Sbjct: 109 LKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSSVDLVLTDLMMPRLS 168
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL +M D K IPV+MMS DS+ +VLKC+ KGA DFL+KPVR+NEL+NLWQH W
Sbjct: 169 GIELLGKIMSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNELKNLWQHFW 228
Query: 162 RRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSRTSS 221
R L + + G NN S S++ + GS+ S QSS T
Sbjct: 229 RM--CLSSSGSGSGSETGKAAGG--NNNSQSYGGSEHGSGLNVGGGSDNGSGTQSSWTKK 284
Query: 222 P 222
P
Sbjct: 285 P 285
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 35/39 (89%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVK 700
++R+ AL KFR KRK+RC++KKVRYQSRK LAEQRPR+K
Sbjct: 774 TRREVALYKFRQKRKERCFEKKVRYQSRKRLAEQRPRIK 812
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS H+S+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 97/131 (74%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WESFL + L+VLLVE DD+TR ++ ALLR C Y V V +G AW L+ + DLVL
Sbjct: 297 WESFLLKRNLKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVL 356
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+V +P +SG LL+ +M+ + CK +P+++MS +DS+ +V +C+ KGA D+L+KPVR+NE
Sbjct: 357 TDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNE 416
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWR+
Sbjct: 417 LKNLWQHVWRK 427
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 593 RHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGC--TLFIH 650
R GS G S+ +G NG N S+SG+ + ++ S A+ T NG T
Sbjct: 908 RSGSSNGYGSTGNG--NGSMNGSASGSNTGVNNGQSGFGATPMLTDNSGSNGVGGTDAAM 965
Query: 651 DGFNGISARHSSQ-----RDAALTKFRLKRKDRCYDKKV 684
DG +G + + Q R+AAL KFR KRK+RC++KK
Sbjct: 966 DGVSGGNGLCTEQMRFARREAALNKFRQKRKERCFEKKT 1004
>gi|379025904|dbj|BAL63729.1| pseudo-response regulator [Triticum turanicum]
gi|379025906|dbj|BAL63730.1| pseudo-response regulator [Triticum turanicum]
gi|379025908|dbj|BAL63731.1| pseudo-response regulator [Triticum polonicum]
Length = 665
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+ +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQGLPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVI MS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVISMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 97/131 (74%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WESFL + L+VLLVE DD+TR ++ ALLR C Y V V +G AW L+ + DLVL
Sbjct: 177 WESFLLKRNLKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVL 236
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+V +P +SG LL+ +M+ + CK +P+++MS +DS+ +V +C+ KGA D+L+KPVR+NE
Sbjct: 237 TDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNE 296
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWR+
Sbjct: 297 LKNLWQHVWRK 307
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 593 RHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGC--TLFIH 650
R GS G S+ +G NG N S+SG+ + ++ S A+ T NG T
Sbjct: 788 RSGSSNGYGSTGNG--NGSMNGSASGSNTGVNNGQSGFGATPMLTDNSGSNGVGGTDAAM 845
Query: 651 DGFNGISARHSSQ-----RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVR 705
DG +G + + Q R+AAL KFR KRK+RC++KKVRYQSRK LAEQRPRV+GQFVR
Sbjct: 846 DGVSGGNGLCTEQMRFARREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRVRGQFVR 905
Query: 706 QVKNETKDANAD 717
Q ++ +A+
Sbjct: 906 QAVHDPSAGDAE 917
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAA+FL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVELPS-ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 152 ELRNLWQHVWRR 163
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 98/150 (65%), Gaps = 5/150 (3%)
Query: 10 SEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVA 69
S GG+ I L + + WE FL +RVLLVE DD TR I++ALLR C Y V
Sbjct: 51 SSGGLQIPLSQQTAAT-----VCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVV 105
Query: 70 AVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSI 129
+G+ AW+ L+ + ID+VLTEV +P +SG LL ++ H +NIPVIMMS HDS+
Sbjct: 106 EASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSM 165
Query: 130 SMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+V KC+ KGA DFL+KP+R+NEL+ LWQH
Sbjct: 166 GLVFKCLSKGAVDFLVKPIRKNELKILWQH 195
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
SQR+AALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVR+ T D
Sbjct: 660 SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDD 711
>gi|356514272|ref|XP_003525830.1| PREDICTED: uncharacterized protein LOC100778877 [Glycine max]
Length = 424
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 105/147 (71%), Gaps = 9/147 (6%)
Query: 70 AVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSI 129
AVPDGL AWE LK + +DL+LTEVELP+ISGFAL +L+MEHD+CK I VIMMS HDS+
Sbjct: 20 AVPDGLKAWEMLKKKAPELDLILTEVELPAISGFALFSLIMEHDICKRILVIMMSSHDSV 79
Query: 130 SMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENN 189
+M LKCML GA +FLIKP+R+NELRNLWQH+ QN K SE+N
Sbjct: 80 NMALKCMLNGAINFLIKPIRKNELRNLWQHI--------STPTQNTTFSPKKLKTASEDN 131
Query: 190 MASSHSSDYAASSQK-NKGSEKVSDAQ 215
AS+ S+ ASS+K N+ SE++S+AQ
Sbjct: 132 SASNKSNGSMASSKKNNECSERLSEAQ 158
>gi|425856110|gb|AFX97563.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 111/164 (67%), Gaps = 10/164 (6%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
IDLVLTEVELPS+SGF LL+ +MEHD CKNIPVIMMS +D++SMV KCMLKGAADFL+KP
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 60
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVP----QNLHDVYHKGGAISENNMASSHSSDYAASSQ 203
+R+NELRNLWQHVWR+ L G + Q +V + G +E A HS+ +
Sbjct: 61 IRKNELRNLWQHVWRKQ-LANGEIDVQQIQQEENVAEQHGRKTEATKA-EHSTQNVV--R 116
Query: 204 KNKG-SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSAS 246
KN+ SE+ SDAQSS T S EAES + + Q+ R +S
Sbjct: 117 KNRECSEQESDAQSSCTRSEP-EAESKHTNSFLEFKQITERQSS 159
>gi|425856112|gb|AFX97564.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 111/164 (67%), Gaps = 10/164 (6%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
IDLVLTEVELPS+SGF LL+ +MEHD CKNIPVIMMS +D++SMV KCMLKGAADFL+KP
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 60
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVP----QNLHDVYHKGGAISENNMASSHSSDYAASSQ 203
+R+NELRNLWQHVWR+ L G + Q +V + G +E A HS+ +
Sbjct: 61 IRKNELRNLWQHVWRKQ-LANGEIDVQQIQQEENVAEQHGRKTEATKA-EHSTQNVV--R 116
Query: 204 KNKG-SEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSAS 246
KN+ SE+ SDAQSS T S EAES + + Q+ R +S
Sbjct: 117 KNRECSEQESDAQSSCTRSEP-EAESKHTNSFLEFKQITERQSS 159
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 99/131 (75%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WESFL + LRVLLVE DD+TR ++ ALLR C Y V +V +G AW L+ + DLVL
Sbjct: 174 WESFLLKRKLRVLLVEDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVL 233
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+V +P +SG +L+ +++ + CK +P+++MS +DS+++V +C+ KGA D+L+KPVR+NE
Sbjct: 234 TDVVMPCLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNE 293
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWR+
Sbjct: 294 LKNLWQHVWRK 304
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%), Gaps = 13/117 (11%)
Query: 603 SNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHS- 661
SN+G+ NN SG + + N +S GT P +++G + G NG+
Sbjct: 810 SNTGV-----NNGQSGLGAMLMANDNSGSNGAGGTDP-SVDGVS-----GGNGLCTDQMR 858
Query: 662 -SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
++R+AAL KFR KRK+RC++KKVRYQSRK LAEQRPRV+GQFVRQ + NA+
Sbjct: 859 FARREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRVRGQFVRQAVYDPSAGNAE 915
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 98/143 (68%), Gaps = 14/143 (9%)
Query: 75 LAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLK 134
+ AW ++ R ++ DLVLTEV +PS+SG LL+ ++ D CKNIPV+MMS DSI VLK
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLK 60
Query: 135 CMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSH 194
CM KGA DFL+KPVR+NELRNLWQHVWRRH++ + G SENN AS+H
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAM----------NCQTNG---SENNAASNH 107
Query: 195 -SSDYAASSQKNKGSEKVSDAQS 216
S++ A S+ + S++ SDAQS
Sbjct: 108 ISANVANGSKTGENSDEESDAQS 130
>gi|379025626|dbj|BAL63590.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 697
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 94/161 (58%), Gaps = 30/161 (18%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIP-----------------------------VIM 122
TEV + +SG LL +M H+VCK+IP +
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPDPPHLGAKMFQYQVHLLQCCCVHRFICSWFPV 148
Query: 123 MSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
MS HDS+ VL C+ GAADFL KP+R+NEL+NLW HVWRR
Sbjct: 149 MSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWRR 189
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 645 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 688
>gi|379025628|dbj|BAL63591.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025630|dbj|BAL63592.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 697
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 94/161 (58%), Gaps = 30/161 (18%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIP-----------------------------VIM 122
TEV + +SG LL +M H+VCK+IP +
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPDPPHLGAKMFQYQVHLLQCCCVHRFICSWFPV 148
Query: 123 MSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
MS HDS+ VL C+ GAADFL KP+R+NEL+NLW HVWRR
Sbjct: 149 MSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWRR 189
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 645 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 688
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 99/131 (75%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WESFL + LRVLLVE DD+TR ++ ALLR C Y V +V +G AW L+ + DLVL
Sbjct: 174 WESFLLKRKLRVLLVEDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVL 233
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+V +P +SG +L+ +++ + CK +P+++MS +DS+++V +C+ KGA D+L+KPVR+NE
Sbjct: 234 TDVVMPCLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNE 293
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWR+
Sbjct: 294 LKNLWQHVWRK 304
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 21/121 (17%)
Query: 594 HGSPAGNQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGF 653
+GS +G SN+G+ NN SG + + N +S GT P +++G + G
Sbjct: 958 NGSASG---SNTGV-----NNGQSGLGAMLMANDNSGSNGAGGTDP-SVDGVS-----GG 1003
Query: 654 NGISARHS--SQRDAALTKFRLKRKDRCYDKKVR-----YQSRKSLAEQRPRVKGQFVRQ 706
NG+ ++R+AAL KFR KRK+RC++KKVR YQSRK LAEQRPRV+GQFVRQ
Sbjct: 1004 NGLCTDQMRFARREAALNKFRQKRKERCFEKKVRTFVVRYQSRKRLAEQRPRVRGQFVRQ 1063
Query: 707 V 707
Sbjct: 1064 A 1064
>gi|379025924|dbj|BAL63739.1| pseudo-response regulator [Triticum turgidum]
Length = 659
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 88/132 (66%), Gaps = 6/132 (4%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE FL R +RVLLVE DDSTRQ+++ALLR C Y+V +G AW L+ +IDLVL
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 85
Query: 93 TEVEL-PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
TEV + +SG LL +M H+VCK+IPVIMMS HDS+ VL C+ GAADFL KP+
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIMVV 145
Query: 152 ELRNLWQHVWRR 163
E HVWRR
Sbjct: 146 ET-----HVWRR 152
>gi|255568149|ref|XP_002525050.1| Two-component response regulator ARR2, putative [Ricinus communis]
gi|223535631|gb|EEF37297.1| Two-component response regulator ARR2, putative [Ricinus communis]
Length = 659
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Query: 68 VAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHD 127
V AV +GL AW+ L+ + IDL+L+EV +P +SG LL +M H CKNIPVIMMS HD
Sbjct: 3 VTAVANGLQAWKLLEDLTNHIDLILSEVAMPCLSGIGLLCKIMNHRTCKNIPVIMMSSHD 62
Query: 128 SISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR-HSLLGGHVPQNLHDVYHKGGAIS 186
S+++V KC+ KGA DFL+KP+R+NEL+NLWQHVWR+ HS G ++ S
Sbjct: 63 SMNVVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKCHSSSGSGSESDIRTRKSTSPEES 122
Query: 187 ENNMASSHSSDYAASSQKNK-GSEKVSDAQSSRT 219
+NN S+ D ++ + GS+ S QSS T
Sbjct: 123 DNNTGSNDEDDIGSTGLNARDGSDHGSGTQSSWT 156
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 47/53 (88%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
S+QR+AAL KFR KRK+RC++KKVRYQSRK LAEQRPRV+GQFVRQV + K+
Sbjct: 602 SAQREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQVTHGNKE 654
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 75/99 (75%)
Query: 65 GYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMS 124
G V + +G AW L+ + ++IDLVLTEV +P +SG +LL+ +M H++ KNIPVIMMS
Sbjct: 34 GDAVISAKNGQQAWAYLEDKGNNIDLVLTEVFMPGVSGISLLSRIMRHNIFKNIPVIMMS 93
Query: 125 LHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
D +S V KC+ KGA DFL+KP+R+NEL+NLWQHVWR+
Sbjct: 94 SSDDMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRQ 132
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ-VKNE 710
R A L K+R K+KDR + KKVRYQSRK LA+QRPRV+GQFV+Q V+N+
Sbjct: 604 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRVRGQFVKQAVQNQ 651
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSFVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A +G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGPNGV 527
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
S L R +R+LL + D + Q + LLRKC Y+V AV L IDL+L E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
V+LP GF +L + + IP++MMS D +++V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 155 NLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 NLWMHMWRRRRMLG 147
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 472 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 527
>gi|375126877|gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
attenuata]
Length = 551
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Query: 26 SEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP 85
SE+V++ E F+ R +R+LL + D + Q + LL KC Y+V + + L
Sbjct: 4 SEIVKS-GEGFIDRSKVRILLCDKDAKSSQEVFTLLCKCSYQVTSARSPRQVIDALNAEG 62
Query: 86 HSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
ID++L+EV+LP G+ +L +M + IPVIMMS D +S+V+KC+ GAAD+L+
Sbjct: 63 PEIDIILSEVDLPMSKGYKMLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADYLV 122
Query: 146 KPVRRNELRNLWQHVWRRHSLLG 168
KP+R NEL NLW H+WRR +LG
Sbjct: 123 KPLRTNELLNLWTHMWRRRQMLG 145
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 42/53 (79%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 463 RRTAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 515
>gi|147861344|emb|CAN83993.1| hypothetical protein VITISV_039545 [Vitis vinifera]
Length = 191
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 79/128 (61%), Gaps = 20/128 (15%)
Query: 37 LPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
L M RVLLVE DDSTR +I ALLR CGY+V +GL AW LK + IDLVLTEV
Sbjct: 53 LVLMKSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDXSNHIDLVLTEVN 112
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
LP +S +MS DS ++VLKC+ KGA DFL+KP R+NEL+ L
Sbjct: 113 LPRLS--------------------VMSTXDSGALVLKCLSKGATDFLVKPXRKNELKFL 152
Query: 157 WQHVWRRH 164
WQH+WRR
Sbjct: 153 WQHIWRRR 160
>gi|351722597|ref|NP_001235202.1| timing of CAB expression 1 [Glycine max]
gi|158999372|gb|ABW87010.1| timing of CAB expression 1 [Glycine max]
Length = 558
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 5/158 (3%)
Query: 11 EGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAA 70
E G +I+L E G ++ + F+ R +R+LL + D + Q + LL +C Y+V +
Sbjct: 2 ESGEEINLNIESGG-----KSGGDGFIDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTS 56
Query: 71 VPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSIS 130
V + L ID++L E++LP G +L + + IPVIMMS D +S
Sbjct: 57 VKSARQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIARDKEFRRIPVIMMSAQDEVS 116
Query: 131 MVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLG 168
+V+KC+ GAAD+L+KP+R NEL NLW H+WRR +LG
Sbjct: 117 IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLG 154
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR++ D N +
Sbjct: 477 RREAALMKFRQKRKERCFDKKIRYINRKRLAERRPRVRGQFVRKLNGANVDLNGE 531
>gi|147807228|emb|CAN70741.1| hypothetical protein VITISV_022754 [Vitis vinifera]
Length = 165
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 80/128 (62%), Gaps = 20/128 (15%)
Query: 37 LPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
L M RVLLVE DDSTR +I ALLR CGY+V +GL AW LK + IDLVLTEV
Sbjct: 53 LVLMKSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDASNHIDLVLTEVN 112
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
LP +S +MS DS ++VLKC+ KGA DFL+KP+R+NEL+ L
Sbjct: 113 LPRLS--------------------VMSTDDSGALVLKCLSKGATDFLVKPIRKNELKFL 152
Query: 157 WQHVWRRH 164
WQH+WRR
Sbjct: 153 WQHIWRRR 160
>gi|422898326|dbj|BAM67029.1| timing of cab expression 1-like [Chrysanthemum seticuspe f.
boreale]
Length = 562
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 88/143 (61%)
Query: 26 SEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP 85
+E++++ E F+ R +R+LL + D + + LL KC Y+V V + L
Sbjct: 4 NEILKSGGEGFIDRSKVRILLCDNDMKSSVEVYDLLSKCSYQVTPVRSPRQVIDALNVEG 63
Query: 86 HSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
ID++L+EV+LP GF +L +M + IPVIMMS D +++V+KC+ GAAD+L+
Sbjct: 64 PDIDIILSEVDLPMAKGFKMLKYIMRDKDLRRIPVIMMSAQDEVAVVVKCLRLGAADYLV 123
Query: 146 KPVRRNELRNLWQHVWRRHSLLG 168
KP+R NEL NLW H+WRR +LG
Sbjct: 124 KPLRTNELLNLWTHMWRRRRMLG 146
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 636 GTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQ 695
G +P ++ + N ++ +R+AAL KFR KRK+RC+DKK+RY +RK LAE+
Sbjct: 445 GQMPPGMHPWPPYGGSSSNNVNVPKLDRREAALLKFRQKRKERCFDKKIRYVNRKKLAER 504
Query: 696 RPRVKGQFVRQVKNETKDANA 716
RPRV+GQFVR++ D N
Sbjct: 505 RPRVRGQFVRKINGINVDLNG 525
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 39 RMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELP 98
R +R+LL + D +T Q + LL +C Y+V+ V E L +DLVL+EVELP
Sbjct: 11 RSRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELP 70
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+ GF +L +++ + K+IP++MMS D +++V+KC+ GAAD+L+KP+R NEL NLW
Sbjct: 71 NGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWT 130
Query: 159 HVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAAS 201
H+WRR +LG L KG S N +A SD + S
Sbjct: 131 HMWRRRRMLGLTEKHIL-----KGHLSSRNTIAEIFVSDTSES 168
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+ +R+AAL KFR KRKDRCY+KK+RY SRK LAEQRPRVKGQFVR+
Sbjct: 435 AERREAALHKFRQKRKDRCYEKKIRYASRKRLAEQRPRVKGQFVRR 480
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 97/163 (59%), Gaps = 5/163 (3%)
Query: 39 RMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELP 98
R +R+LL + D +T Q + LL +C Y+V+ V E L +DLVL+EVELP
Sbjct: 11 RSRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELP 70
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+ GF +L +++ + K+IP++MMS D +++V+KC+ GAAD+L+KP+R NEL NLW
Sbjct: 71 NGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWT 130
Query: 159 HVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAAS 201
H+WRR +LG L KG S N +A SD + S
Sbjct: 131 HMWRRRRMLGLTEKHIL-----KGHLSSRNTIAEIFVSDTSES 168
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+ +R+AAL KFR KRKDRCY+KK+RY SRK LAEQRPRVKGQFVR+
Sbjct: 432 AERREAALHKFRQKRKDRCYEKKIRYASRKRLAEQRPRVKGQFVRR 477
>gi|51980216|gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 93/155 (60%)
Query: 14 MDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPD 73
M++ L E G+S ++F+ R +R+L+ + D + + +S LL KC Y+V +V
Sbjct: 4 MEVSLNREGGGNSSKGGGGGDAFIDRSKVRILVCDNDAKSLEEVSTLLLKCSYQVTSVRS 63
Query: 74 GLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVL 133
+ L +ID++L E++LP G LL + + + IPVIMMS D +S+V+
Sbjct: 64 ARQVIDALNAEGANIDIILAELDLPLAKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVV 123
Query: 134 KCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLG 168
KC+ GAAD+L+KP+R NEL NLW HVWRR +LG
Sbjct: 124 KCLRLGAADYLVKPLRTNELLNLWTHVWRRRRMLG 158
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 29/140 (20%)
Query: 605 SGLCNGLANNSSSGTYSR----IDRNSSSAKASGTGTVPQ---NLNGCTLFIHDGFN--- 654
SG+ N + S++ Y + + +S A S +PQ ++NG F + N
Sbjct: 386 SGVVNQVMMPSAAQLYHKNLHDLQNHSPKAMMSQYHHLPQCPPHVNGMAPFPYYPVNICL 445
Query: 655 ---GISARHS----------------SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQ 695
+SA HS +R+AAL KFR KRK+RC+DKK+RY +RK LAE+
Sbjct: 446 QPGQMSASHSWPFGSPSSSEVNLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAER 505
Query: 696 RPRVKGQFVRQVKNETKDAN 715
RPRV+GQFVR+V D N
Sbjct: 506 RPRVRGQFVRKVNGVNVDLN 525
>gi|34499879|gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 17 DLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLA 76
D+E ++ G S + + F+ R +R+LL + D + + + LL C Y+V AV
Sbjct: 6 DMENDEGGPSNARGS--DPFIDRSKVRILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQ 63
Query: 77 AWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCM 136
+ L ID++L+EV+LP+ G +L +M + IPVIMMS D +S+V+KC+
Sbjct: 64 VIDALNAEGPDIDIILSEVDLPTKKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCL 123
Query: 137 LKGAADFLIKPVRRNELRNLWQHVWRRHSLLG 168
GAAD+L+KP+R NE+ NLW H+WRR +LG
Sbjct: 124 RLGAADYLVKPLRTNEMLNLWTHMWRRRQMLG 155
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 656 ISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+ R +R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V T D N
Sbjct: 457 VKLREVDRREAALIKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVTVDLN 516
Query: 716 ADGCP 720
D P
Sbjct: 517 GDPSP 521
>gi|224124202|ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa]
Length = 541
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 82/133 (61%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F+ R +R+LL + D + Q + LL KC Y+V +V + L ID++L+EV
Sbjct: 19 FVDRSKVRILLCDNDAKSSQEVFTLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEV 78
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
++P G +L +M + IPVIMMS D +S+V+KC+ GAAD+L+KP+R NEL N
Sbjct: 79 DIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLN 138
Query: 156 LWQHVWRRHSLLG 168
LW H+WRR +LG
Sbjct: 139 LWTHMWRRRHMLG 151
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 456 RREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 508
>gi|356508533|ref|XP_003523010.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 560
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 11 EGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAA 70
E G +I+L E + ++ + F+ R +R+LL + D + Q + LL +C Y+V +
Sbjct: 2 ESGDEINLNIESGNNG---KSGGDGFVDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTS 58
Query: 71 VPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSIS 130
V + L ID++L E++LP G +L + + + IPVIMMS D +S
Sbjct: 59 VKSARQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIAQDKEFRRIPVIMMSAQDEVS 118
Query: 131 MVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLG 168
+V+KC+ GAAD+L+KP+R NEL NLW H+WRR +LG
Sbjct: 119 VVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLG 156
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR++K D N
Sbjct: 479 RREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLKGANADLNG 532
>gi|297733942|emb|CBI15189.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 80/133 (60%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F+ R +R+LL + D + I LL C Y+V +V + L H ID++L EV
Sbjct: 19 FIDRSNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEV 78
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+LP G +L +M + IP+IMMS D +S+V+KC+ GAAD+L+KP+R NEL N
Sbjct: 79 DLPMTKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 138
Query: 156 LWQHVWRRHSLLG 168
LW H+WRR +LG
Sbjct: 139 LWTHMWRRRRMLG 151
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR++ D N
Sbjct: 443 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKMNGVNVDLNG 496
>gi|359491315|ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 556
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 80/133 (60%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F+ R +R+LL + D + I LL C Y+V +V + L H ID++L EV
Sbjct: 21 FIDRSNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEV 80
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+LP G +L +M + IP+IMMS D +S+V+KC+ GAAD+L+KP+R NEL N
Sbjct: 81 DLPMTKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 140
Query: 156 LWQHVWRRHSLLG 168
LW H+WRR +LG
Sbjct: 141 LWTHMWRRRRMLG 153
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR++ D N
Sbjct: 478 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKMNGVNVDLN 530
>gi|51571875|dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa Japonica Group]
Length = 518
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL ++D S+ + + LL C Y+V L C ID++L
Sbjct: 20 QQFVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILA 79
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL
Sbjct: 80 EVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 139
Query: 154 RNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSD 213
NLW HVWRR +LG +D + A+SE + A+++S+ + +K E ++
Sbjct: 140 LNLWTHVWRRRRMLGLSEKNFFNDNFEL--ALSEPSDANTNSTTLLSDDTDDKPKENINQ 197
Query: 214 AQSSRTSSPY 223
S+ Y
Sbjct: 198 ETSTSNQHEY 207
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 40/46 (86%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
S +R AAL KFRLKRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ
Sbjct: 440 SERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQ 485
>gi|115447337|ref|NP_001047448.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|68565719|sp|Q689G9.2|PRR1_ORYSJ RecName: Full=Two-component response regulator-like PRR1; AltName:
Full=Pseudo-response regulator 1; Short=OsPRR1
gi|47847546|dbj|BAD21598.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|47847675|dbj|BAD21456.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|113536979|dbj|BAF09362.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|222623253|gb|EEE57385.1| hypothetical protein OsJ_07546 [Oryza sativa Japonica Group]
Length = 518
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F+ R +R+LL ++D S+ + + LL C Y+V L C ID++L EV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL N
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 156 LWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQ 215
LW HVWRR +LG +D + A+SE + A+++S+ + +K E ++
Sbjct: 142 LWTHVWRRRRMLGLSEKNFFNDNFEL--ALSEPSDANTNSTTLLSDDTDDKPKENINQET 199
Query: 216 SSRTSSPY 223
S+ Y
Sbjct: 200 STSNQHEY 207
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 40/46 (86%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
S +R AAL KFRLKRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ
Sbjct: 440 SERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQ 485
>gi|218191182|gb|EEC73609.1| hypothetical protein OsI_08092 [Oryza sativa Indica Group]
Length = 518
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F+ R +R+LL ++D S+ + + LL C Y+V L C ID++L EV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL N
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 156 LWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQ 215
LW HVWRR +LG +D + A+SE + A+++S+ + +K E ++
Sbjct: 142 LWTHVWRRRRMLGLSEKNFFNDNFEL--ALSEPSDANTNSTTLLSDDTDDKPKENINQET 199
Query: 216 SSRTSSPY 223
S+ Y
Sbjct: 200 STSNQHEY 207
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 40/46 (86%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
S +R AAL KFRLKRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ
Sbjct: 440 SERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQ 485
>gi|356513521|ref|XP_003525462.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 559
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D + + + ALL C Y+V +V + L ID++L
Sbjct: 29 DGFIDRSKVRILLCDNDSKSSEEVFALLLGCSYQVTSVRSARQVIDALNAEGQYIDIILA 88
Query: 94 EVELPSISGFALLTLVM-EHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV+LP G LL + + ++C+ IPVIMMS D +S+V+KC+ GAAD+L+KP+R NE
Sbjct: 89 EVDLPIKKGMKLLKYIARDKELCR-IPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNE 147
Query: 153 LRNLWQHVWRRHSLLG 168
L NLW H+WRR +LG
Sbjct: 148 LLNLWTHMWRRRRMLG 163
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR++ D N
Sbjct: 478 RREAALVKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGINVDLN 530
>gi|357150179|ref|XP_003575369.1| PREDICTED: two-component response regulator-like PRR1-like
[Brachypodium distachyon]
Length = 521
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Query: 34 ESFLPRMVLRVLLVEAD-DSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
+SF+ R +R+LL ++D DS+R ++ LLR C Y+V L C +D++L
Sbjct: 25 QSFVDRSKVRILLCDSDPDSSRDVLR-LLRNCSYQVTCAKSPRQVINVLNCEGAEMDIIL 83
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NE
Sbjct: 84 AEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNE 143
Query: 153 LRNLWQHVWRRHSLLG 168
L NLW HVWRR +LG
Sbjct: 144 LLNLWTHVWRRRRMLG 159
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 40/49 (81%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S +R AAL KFR KRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 444 SDRRAAALAKFRQKRKERCFDKKVRYVNRKKLAEIRPRVRGQFVRQAGN 492
>gi|325910794|dbj|BAJ83827.1| circadian response regulator 1b [Physcomitrella patens subsp.
patens]
Length = 701
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 154/347 (44%), Gaps = 26/347 (7%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
DLVLT+V +P +SG LL+ +M+ + CK +P+++MS +DS+ +V +C+ KGA D+L+KP
Sbjct: 9 FDLVLTDVVMPCLSGVGLLSKMMKREACKRVPIVIMSSYDSLDIVFRCISKGACDYLVKP 68
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKG 207
VR+NELRNLWQHVWR+ + + G ++ + D + S G
Sbjct: 69 VRKNELRNLWQHVWRKCR----SSSGSRSGSGSQTGEVARPQSRGVEADDNPSGSNDGNG 124
Query: 208 SEKVSDAQSSR----TSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLE 263
S +D SSR S A MQ +Q R+ + + D + + +
Sbjct: 125 SSDGNDNGSSRLNAQGGSDNGSGNQACMQPVQ-----VPRNNAAPAAADGDEEGQATSQG 179
Query: 264 TESLMPESKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKND 323
+ + E G E+ + Q D + +ED CV Q G P D
Sbjct: 180 MGANLDEEM--GHDLEMATRRSTCDTAKLDQQPDVGRQQDEDDACVM---QDAGPSPGED 234
Query: 324 RINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPD----KLSTPNDGIPDKLSTLH 379
+ T G G + E S A+DLI + + S +DG D+
Sbjct: 235 NGESPSTSGKDGTAE---ESSPKAVDLINGIACQPQTQGAEQAEGSENDDGELDQRGRSS 291
Query: 380 NRTKKCEFSPH-LELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWY 425
+ S LELSL++ + ND +ER L HS SAFS Y
Sbjct: 292 PKDHSGSDSGFMLELSLKRPRSAVDNDGDTEERQPLRHSGGSAFSRY 338
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 600 NQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVP-------QNLNGCTLFIHDG 652
N ++G NG N S+SG+ + ++ + G G P N G T DG
Sbjct: 577 NGYGSTGNGNGSMNGSASGSNTGVNNGQN-----GLGVTPMANANSGNNGVGGTDPAMDG 631
Query: 653 FNGISARHSSQ-----RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
+G + + Q R+AAL KFR KRK+RC++KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 632 VSGGNGLCTEQIRFARREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQA 691
Query: 708 KNETKDANAD 717
++ +A+
Sbjct: 692 AHDPSAGDAE 701
>gi|255547335|ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 550
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 81/135 (60%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
E + R +R+LL + D + + + LL KC Y+V +V + L ID++L+
Sbjct: 14 EGLIDRSKVRILLCDNDSKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGPDIDIILS 73
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP G +L + + IPVIMMS D +S+V+KC+ GAAD+L+KP+R NEL
Sbjct: 74 EVDLPMNKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNEL 133
Query: 154 RNLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 134 LNLWTHMWRRRRMLG 148
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 45/61 (73%)
Query: 656 ISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+ + +R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR++ D N
Sbjct: 459 VKIKKLDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKLNGVNVDLN 518
Query: 716 A 716
Sbjct: 519 G 519
>gi|449486993|ref|XP_004157464.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR1-like [Cucumis sativus]
Length = 557
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 80/135 (59%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D + + + LL KC Y+V +V + L ID++L+
Sbjct: 24 DGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILS 83
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP G +L + + IPVIMMS D + +V+KC+ GAAD+L+KP+R NEL
Sbjct: 84 EVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNEL 143
Query: 154 RNLWQHVWRRHSLLG 168
NLW H+WRR LG
Sbjct: 144 LNLWTHMWRRRRTLG 158
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 473 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNG 526
>gi|15240235|ref|NP_200946.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2.1|APRR1_ARATH RecName: Full=Two-component response regulator-like APRR1; AltName:
Full=ABI3-interacting protein 1; AltName:
Full=Pseudo-response regulator 1; AltName: Full=Timing
of CAB expression 1
gi|9247020|gb|AAF86252.1|AF272039_1 timing of CAB expression 1 protein [Arabidopsis thaliana]
gi|7576354|dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150 [Arabidopsis thaliana]
gi|29028744|gb|AAO64751.1| At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|332010077|gb|AED97460.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
Length = 618
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 80/135 (59%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D ++ + LL +C Y+V AV + L ID++L
Sbjct: 11 DGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILA 70
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
E++LP G +L + + IPVIMMS D + +V+KC+ GAAD+L+KP+R NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNEL 130
Query: 154 RNLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 131 LNLWTHMWRRRRMLG 145
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 654 NGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
N + +R+ AL KFR KR RC+DKK+RY +RK LAE+RPRVKGQFVR++ D
Sbjct: 523 NEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVD 582
Query: 714 ANA 716
N
Sbjct: 583 LNG 585
>gi|449439291|ref|XP_004137419.1| PREDICTED: two-component response regulator-like APRR1-like
[Cucumis sativus]
Length = 557
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 79/133 (59%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F+ R +R+LL + D + + + LL KC Y+V +V + L ID++L+EV
Sbjct: 26 FIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEV 85
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+LP G +L + + IPVIMMS D + +V+KC+ GAAD+L+KP+R NEL N
Sbjct: 86 DLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLN 145
Query: 156 LWQHVWRRHSLLG 168
LW H+WRR LG
Sbjct: 146 LWTHMWRRRRTLG 158
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 473 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLN 525
>gi|356565113|ref|XP_003550789.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 565
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D + + + LL C Y+V +V + L ID++L
Sbjct: 29 DGFIDRSKVRILLCDNDSKSSEEVFTLLLGCSYQVISVRSARQVIDALNAEGQYIDMILA 88
Query: 94 EVELPSISGFALLTLVM-EHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV+LP G LL + + ++C+ IPVIMMS D +S+V+KC+ GAAD+L+KP+R NE
Sbjct: 89 EVDLPIKKGMKLLKYIARDKELCR-IPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNE 147
Query: 153 LRNLWQHVWRRHSLLG 168
L NLW H+WRR +LG
Sbjct: 148 LLNLWTHMWRRRRMLG 163
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR++ D N
Sbjct: 485 RREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGINVDLNG 538
>gi|326522234|dbj|BAK07579.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL ++D + Q + LL C Y+V L C ID++L
Sbjct: 23 QPFVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILA 82
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL
Sbjct: 83 EVDLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 142
Query: 154 RNLWQHVWRRHSLLG 168
NLW HVWRR +LG
Sbjct: 143 LNLWTHVWRRRRMLG 157
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 41/50 (82%)
Query: 660 HSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
HS +R AAL KFR KRKDRC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 440 HSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKLAETRPRVRGQFVRQASN 489
>gi|326531994|dbj|BAK01373.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285651|gb|AEW48243.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL ++D + Q + LL C Y+V L C ID++L
Sbjct: 23 QPFVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILA 82
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL
Sbjct: 83 EVDLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 142
Query: 154 RNLWQHVWRRHSLLG 168
NLW HVWRR +LG
Sbjct: 143 LNLWTHVWRRRRMLG 157
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 41/50 (82%)
Query: 660 HSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
HS +R AAL KFR KRKDRC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 440 HSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKLAETRPRVRGQFVRQASN 489
>gi|364285649|gb|AEW48242.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL ++D + Q + LL C Y+V L C ID++L
Sbjct: 23 QPFVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILA 82
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL
Sbjct: 83 EVDLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 142
Query: 154 RNLWQHVWRRHSLLG 168
NLW HVWRR +LG
Sbjct: 143 LNLWTHVWRRRRMLG 157
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 41/50 (82%)
Query: 660 HSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
HS +R AAL KFR KRKDRC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 440 HSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKLAETRPRVRGQFVRQASN 489
>gi|297793691|ref|XP_002864730.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
gi|297310565|gb|EFH40989.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D + + LL +C Y+V +V + L ID++L
Sbjct: 11 DGFIDRSRVRILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIILA 70
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
E++LP G +L + + IPVIMMS D + +V+KC+ GAAD+L+KP+R NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNEL 130
Query: 154 RNLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 131 LNLWTHMWRRRRMLG 145
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 654 NGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
N + +R+ AL KFR KR RC+DKK+RY +RK LAE+RPRVKGQFVR++ D
Sbjct: 527 NEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVD 586
Query: 714 ANA 716
N
Sbjct: 587 LNG 589
>gi|327533492|gb|AEA92684.1| TOC1 [Phaseolus vulgaris]
Length = 561
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Query: 11 EGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAA 70
E G +I+L E G + + F+ R +R+LL + D ++ Q + LL C Y+V
Sbjct: 2 ESGEEINLNIESGGGNH--GKSGDGFIDRSKVRILLCDNDSNSSQEVFTLLLGCSYQVTL 59
Query: 71 VPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSIS 130
V + L I ++L E++LP+ G +L + + IPVIMMS D +S
Sbjct: 60 VKSPRQVIDALNAEGQHIGIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVS 119
Query: 131 MVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLG 168
+V+KC+ GAAD+L+KP+R NEL NLW H+W R +LG
Sbjct: 120 VVVKCLRLGAADYLVKPLRTNELLNLWMHMWGRRRMLG 157
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR++ D N
Sbjct: 479 RREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGANMDLNG 532
>gi|6996313|emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
Length = 618
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D ++ + LL +C Y+V AV + L ID++L
Sbjct: 11 DGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILA 70
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
E++LP G +L + + IPVIMMS D + +V+KC+ GAAD+L+KP+ NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLLTNEL 130
Query: 154 RNLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 131 LNLWTHMWRRRRMLG 145
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 654 NGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
N + +R+ AL KFR KR RC+DKK+RY +RK LAE+RPRVKGQFVR++ D
Sbjct: 523 NEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVD 582
Query: 714 ANA 716
N
Sbjct: 583 LNG 585
>gi|281308382|gb|ADA58339.1| pseudo-response regulator 1a [Brassica rapa]
Length = 576
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 79/133 (59%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F+ R +R+LL + D ++ + LL +C Y+V +V + L ID++L E+
Sbjct: 15 FIDRSRVRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEI 74
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+LP G +L + + IPVIMMS D + +V+KC+ GAAD+L+KP+R NEL N
Sbjct: 75 DLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLN 134
Query: 156 LWQHVWRRHSLLG 168
LW H+WRR +LG
Sbjct: 135 LWTHMWRRRRMLG 147
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 44/71 (61%)
Query: 650 HDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
H N + +R+ AL KFR KR RC+DKK+RY +RK LAE+RPRVKGQFVR++
Sbjct: 476 HPSPNEVRVTKLDRREEALLKFRRKRNQRCFDKKIRYVNRKKLAERRPRVKGQFVRKMNG 535
Query: 710 ETKDANADGCP 720
D N P
Sbjct: 536 VNVDLNGQPEP 546
>gi|332015070|gb|AED99452.1| PRR9, partial [Capsella rubella]
Length = 91
Score = 117 bits (292), Expect = 3e-23, Method: Composition-based stats.
Identities = 61/94 (64%), Positives = 76/94 (80%), Gaps = 4/94 (4%)
Query: 3 MGEVVV-SSEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALL 61
MGE+VV SS+ GM+ ++ + SSEVV+ WE +LP+ VLRVLLVE+DDSTRQII+ALL
Sbjct: 1 MGEIVVLSSDDGMET-MKNNRGKSSEVVQ--WEKYLPKTVLRVLLVESDDSTRQIITALL 57
Query: 62 RKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
RKC Y+V AV DGLAAWE LK + H+IDLVLTE+
Sbjct: 58 RKCCYKVVAVSDGLAAWEILKEKSHNIDLVLTEL 91
>gi|281308392|gb|ADA58344.1| pseudo-response regulator 1b [Brassica rapa]
Length = 509
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D + + LL +C Y+V +V + L ID++L
Sbjct: 11 DGFIDRSRVRILLCDNDSKSLGDVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILA 70
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
E++LP G +L + + IPVIMMS D + +V+KC+ GAAD+L+KP+R NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNEL 130
Query: 154 RNLWQHVWRRHSLLG 168
NLW ++WRR +LG
Sbjct: 131 LNLWTYMWRRRRMLG 145
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%)
Query: 640 QNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRV 699
QN + H N + A +R+ AL KFR KR RC+DKK+RY +RK LAE+RPRV
Sbjct: 403 QNGQMSMVHYHPSSNEVRASKLDRREEALLKFRRKRNQRCFDKKIRYVNRKKLAERRPRV 462
Query: 700 KGQFVRQVKNETKDANA 716
KGQFVR++ D N
Sbjct: 463 KGQFVRKMNGVNVDLNG 479
>gi|397911978|gb|AFO69282.1| pseudo-response regulator 1, partial [Hordeum vulgare]
Length = 491
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LL ++D + Q + LL C Y+V L C ID++L EV+LP
Sbjct: 1 RILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSKC 60
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL NLW HVWR
Sbjct: 61 FKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWR 120
Query: 163 RHSLLG 168
R +LG
Sbjct: 121 RRRMLG 126
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 41/50 (82%)
Query: 660 HSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
HS +R AAL KFR KRKDRC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 409 HSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKLAETRPRVRGQFVRQASN 458
>gi|242062346|ref|XP_002452462.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
gi|241932293|gb|EES05438.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
Length = 524
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D ++ + + LL C Y V L ID++L
Sbjct: 26 QQFVDRSKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILA 85
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL
Sbjct: 86 EVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNEL 145
Query: 154 RNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSD 213
NLW HVWRR +LG HD + +SE + A+++S+ + ++ E ++
Sbjct: 146 LNLWTHVWRRRRMLGLPEKNFFHDNFEL--VLSEPSDANTNSTTLLSDETDDRPKENMN- 202
Query: 214 AQSSRTSSPYLEAES 228
Q + TS+ LE ES
Sbjct: 203 -QETGTSN-QLEYES 215
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 40/49 (81%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S +R AAL KFR KRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 446 SERRAAALAKFRQKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQASN 494
>gi|308913672|gb|ADO51646.1| TOC1b [Zea mays]
Length = 488
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D S+ + + LL C Y V L ID++L
Sbjct: 20 QQFVDRSKVRILLCDGDASSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILA 79
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL
Sbjct: 80 EVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNEL 139
Query: 154 RNLWQHVWRRHSLLG 168
NLW HVWRR +LG
Sbjct: 140 LNLWTHVWRRRRMLG 154
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S +R AAL KFR KRK+RC+DKKVRY +RK LAE R RV+GQFVR N
Sbjct: 439 SERRAAALAKFRQKRKERCFDKKVRYVNRKKLAETRLRVRGQFVRHASN 487
>gi|226532758|ref|NP_001147823.1| LOC100281433 [Zea mays]
gi|195613968|gb|ACG28814.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D ++ + + LL C Y V L ID++L
Sbjct: 16 QQFVDRSKVRILLCDGDATSSREVLRLLCNCAYHVTCAKSPRQVVNILNYEGGEIDIILA 75
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL
Sbjct: 76 EVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNEL 135
Query: 154 RNLWQHVWRRHSLLG 168
NLW HVWRR +LG
Sbjct: 136 LNLWTHVWRRRRMLG 150
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 40/49 (81%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S +R AAL KFRLKRK+RC+DKKVRY +RK LAE R RV+GQFVRQ N
Sbjct: 437 SERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRARVRGQFVRQPTN 485
>gi|323388709|gb|ADX60159.1| pseudoARR-B transcription factor [Zea mays]
gi|413923083|gb|AFW63015.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D ++ + + LL C Y V L ID++L
Sbjct: 16 QQFVDRSKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILA 75
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL
Sbjct: 76 EVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNEL 135
Query: 154 RNLWQHVWRRHSLLG 168
NLW HVWRR +LG
Sbjct: 136 LNLWTHVWRRRRMLG 150
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S +R AAL KFRLKRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 437 SERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQPTN 485
>gi|316930963|gb|ADU60098.1| pseudo response regulator 1 [Zea mays]
Length = 515
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D ++ + + LL C Y V L ID++L
Sbjct: 16 QQFVDRSKVRILLCDGDATSPREVLRLLCNCAYHVTCAKSPRQVINILNYEGGEIDIILA 75
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
EV+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL
Sbjct: 76 EVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNEL 135
Query: 154 RNLWQHVWRRHSLLG 168
NLW HVWRR +LG
Sbjct: 136 LNLWTHVWRRRRMLG 150
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S +R AAL KFRLKRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 437 SERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQPTN 485
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 103/193 (53%), Gaps = 13/193 (6%)
Query: 27 EVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCR-P 85
EV+ R SF P VLL E DD T +I+ LL++C YRV +G A + L+
Sbjct: 2 EVLTERTRSFSPH----VLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDILQHNDK 57
Query: 86 HSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
H DL+LT++ +P + G L+ V + V ++PVI+MS S + K GAAD+LI
Sbjct: 58 HCFDLILTDIMMPKVDGMDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLI 117
Query: 146 KPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAIS---ENNMASSHSSDYAASS 202
KP+R+NE+ LW H+WR+ G +NL H G IS +++ S+ S D A+
Sbjct: 118 KPIRKNEVATLWHHIWRKVMAAG---TENLEG--HAAGWISAKYRHDVLSAASLDAASIP 172
Query: 203 QKNKGSEKVSDAQ 215
Q+ DAQ
Sbjct: 173 QQCATGTAECDAQ 185
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 25/154 (16%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL---KCRPHSIDLVLTEVELP 98
V+LVE D+ +++ LLRK YRV+ DG AA + L K R +DL+LT++ +P
Sbjct: 6 FHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLADCKQRGDKVDLILTDILMP 65
Query: 99 SISGFALLTLVMEHDVCKNIPVI----------------------MMSLHDSISMVLKCM 136
++GF L+ V+ + +IPV+ +MS DS VL+
Sbjct: 66 EVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQESVLQAF 125
Query: 137 LKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGH 170
GAAD+LIKP+R+NEL LWQHVWR + GG
Sbjct: 126 QAGAADYLIKPIRKNELATLWQHVWRANRAKGGQ 159
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 29/36 (80%)
Query: 670 KFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVR 705
K+ KRK R + KKVRY+SRK LAE RPRV+GQFV+
Sbjct: 487 KYLEKRKHRNFQKKVRYESRKRLAEARPRVRGQFVK 522
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 110 bits (274), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---IDLVLTEVE 96
M VLLVE D T + + LLRKC Y+V +G A + L HS +DL+LT++
Sbjct: 1 MEFHVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSGVKVDLILTDIL 60
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+P ++GF L+ V+ D ++PV++MS DS VL+ GAAD+LIKP+R+NEL L
Sbjct: 61 MPEVTGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATL 120
Query: 157 WQHV 160
WQHV
Sbjct: 121 WQHV 124
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPSISG 102
VLLV+ + TR ++S+LL KCGYRV + DGL A L+ P + LVLT+V +P ++G
Sbjct: 50 VLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLRGSAPDTFQLVLTDVCMPELNG 109
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL+ V + + +PV+MMS D V +C+ +GA ++L+KPV + E++++WQHVWR
Sbjct: 110 IQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTKKEVQHIWQHVWR 169
Query: 163 R 163
+
Sbjct: 170 K 170
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 79/126 (62%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLR+C Y V + + A + L+ DLV+++V +P +
Sbjct: 20 MRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLVISDVHMPDMD 79
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++D MV+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 80 GFKLLELVGLEMD----LPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQHV 135
Query: 161 WRRHSL 166
RR +
Sbjct: 136 IRRKKI 141
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLR+C Y V + + A L+ DLV+++V +P +
Sbjct: 20 MRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLLRENKTMFDLVISDVHMPDMD 79
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++D MV+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 80 GFKLLELVGLEMD----LPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQHV 135
Query: 161 WRRHSL 166
RR +
Sbjct: 136 IRRKKI 141
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 5/124 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D +I+ +L++C Y V G A ETL+ R D+VL++V +P +
Sbjct: 15 LRVLVVDDDPLCLRIVEKMLKRCQYEVTTFSRGAEALETLRARRDDFDIVLSDVHMPDMD 74
Query: 102 GFALLT-LVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E DV PV+MMS + + +VL+ ++ GA D+L+KPVR ELRN+WQHV
Sbjct: 75 GFKLLEHIALELDV----PVMMMSANCATDVVLRGIIHGAVDYLLKPVRLEELRNIWQHV 130
Query: 161 WRRH 164
RR
Sbjct: 131 VRRQ 134
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ +LLRKC Y V + A L+ + DLV+++V +P +
Sbjct: 24 MRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALRMLRENRNKFDLVISDVNMPDMD 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 84 GFKLLELVGLEMD----LPVIMLSAHSDTELVMKGIAHGACDYLLKPVRIEELKNIWQHV 139
Query: 161 WRRHSL 166
RR L
Sbjct: 140 IRRKKL 145
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLRKC Y V + A + L+ + DLV+++V +P +
Sbjct: 24 MRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALKMLRENKNRFDLVISDVNMPDMD 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H + +V K +L GA D+L+KPVR EL+N+WQHV
Sbjct: 84 GFKLLELVGLEMD----LPVIMLSAHSNTELVKKGVLHGACDYLLKPVRIEELKNIWQHV 139
Query: 161 WRR 163
RR
Sbjct: 140 LRR 142
>gi|442756047|gb|JAA70183.1| Hypothetical protein [Ixodes ricinus]
Length = 202
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%)
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LTEV +P SG LL +M H K IPVIMMS HDS+ +V KC+ +GA DFL+KP+R+N
Sbjct: 15 LTEVVMPCFSGIGLLCKIMSHKTRKTIPVIMMSSHDSMGLVFKCLSEGAVDFLLKPIRKN 74
Query: 152 ELRNLWQHVWRR 163
EL+NLWQHVWRR
Sbjct: 75 ELKNLWQHVWRR 86
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE F L+VL+V+ D +++ +LR+C Y+V P+G AA E L+ R DLVL
Sbjct: 47 WEMFPAG--LKVLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAALEKLRDRSVHFDLVL 104
Query: 93 TEVELPSISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
++V +P + GF LL + +E D +PVIMMS + ++VL+ + GA DFLIKPVR
Sbjct: 105 SDVYMPDMDGFKLLEHIGLELD----LPVIMMSSNGETNVVLRGVTHGAVDFLIKPVRVE 160
Query: 152 ELRNLWQHVWRR 163
ELRN+WQHV RR
Sbjct: 161 ELRNVWQHVVRR 172
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LRKC Y V A + L+ R + D+V+++V +P +
Sbjct: 13 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQILRERRNKFDIVISDVNMPDMD 72
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIMMS+ S V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 73 GFKLLELIGLEMD----LPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 161 WRR 163
+R+
Sbjct: 129 YRK 131
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 107 bits (267), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 78/124 (62%), Gaps = 1/124 (0%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP-HSIDLVLTEVELPSI 100
+ +LLV+ + +R ++ LLRKC Y+V G+ A E L+ +P + L+LT+V +P +
Sbjct: 5 VHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILRGQPPGTFSLILTDVMMPDV 64
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G LL V + N+PVIMMS ++ V +C+ GA D+L+KPV + E++++WQHV
Sbjct: 65 DGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMWQHV 124
Query: 161 WRRH 164
WRR
Sbjct: 125 WRRQ 128
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLRKC Y V + A + L+ + DLV+++V +P I
Sbjct: 19 MRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKMLRENRNKFDLVISDVNMPDID 78
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 79 GFKLLELVGLEMD----LPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHV 134
Query: 161 WRRHSL 166
RR +
Sbjct: 135 VRRKNF 140
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LRKC Y V A + L+ R + D+V+++V +P +
Sbjct: 13 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNMPDMD 72
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIMMS+ S V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 73 GFKLLELIGLEMD----LPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 161 WRR 163
+R+
Sbjct: 129 YRK 131
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LRKC Y V A + L+ R + D+V+++V +P +
Sbjct: 13 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNMPDMD 72
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIMMS+ S V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 73 GFKLLELIGLEMD----LPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 161 WRR 163
+R+
Sbjct: 129 YRK 131
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLRKC Y V + A L+ + DLV+++V +P I
Sbjct: 19 MRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDVNMPDID 78
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 79 GFKLLELVGLEMD----LPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHV 134
Query: 161 WRRHSL 166
RR +
Sbjct: 135 VRRKNF 140
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D +I+ +L++C Y V G A +TL+ R D+VL++V +P +
Sbjct: 14 LRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALKTLRERKDDFDIVLSDVHMPDMD 73
Query: 102 GFALLTLVMEHDVCK-NIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL EH + +IPV+MMS + + +VL+ ++ GA D+L+KPVR ELRN+WQHV
Sbjct: 74 GFKLL----EHIALELDIPVMMMSANCATDVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 129
Query: 161 WRR 163
RR
Sbjct: 130 VRR 132
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLRKC Y V + A E L+ + DLV+++V +P +
Sbjct: 21 MRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMPDMD 80
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 81 GFKLLELVGLEMD----LPVIMLSSHGDKEFVFKGITHGAVDYLLKPVRLEELKNIWQHV 136
Query: 161 WRR 163
RR
Sbjct: 137 IRR 139
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 79/126 (62%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLR+C Y+V + A + L+ ++ DLV+++V +P +
Sbjct: 24 MRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNFDLVISDVSMPDMD 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H +V++ + GA D+L+KPVR EL+N+WQHV
Sbjct: 84 GFKLLELVGLEMD----LPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELKNIWQHV 139
Query: 161 WRRHSL 166
RR +
Sbjct: 140 IRRKKI 145
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LL+KC Y+V + A + L+ + DLV+++V +P +
Sbjct: 18 MRVLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQALKMLRENRNKYDLVISDVNMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H +V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMLSAHSDKELVYKGVTHGAVDYLLKPVRIEELKNIWQHV 133
Query: 161 WRRHSL 166
RR L
Sbjct: 134 IRRKKL 139
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LRKC Y V A E L+ R D+V+++V +P +
Sbjct: 12 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEILRERKSKFDIVISDVNMPDMD 71
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS+ S V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 72 GFKLLEHIGLEMD----LPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 127
Query: 161 WRR 163
+R+
Sbjct: 128 YRK 130
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 79/126 (62%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLR+C Y+V + A + L+ ++ DLV+++V +P +
Sbjct: 24 MRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNFDLVISDVSMPDMD 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H +V++ + GA D+L+KPVR EL+N+WQHV
Sbjct: 84 GFKLLELVGLEMD----LPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELKNIWQHV 139
Query: 161 WRRHSL 166
RR +
Sbjct: 140 IRRKKI 145
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 105 bits (261), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ VL+V+ + R + S+LLRKCGYRV G A E L+ R L+LT+V +P I
Sbjct: 23 VHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELLR-RGTEFHLLLTDVMMPGID 81
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G ALL +V + +++PVIMMS ++ V +C+ GA D+L+KPV R ++++WQHVW
Sbjct: 82 GPALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLLKPVSRKAVKHMWQHVW 141
Query: 162 RR 163
R+
Sbjct: 142 RK 143
>gi|168065350|ref|XP_001784616.1| circadian clock protein PRR3 [Physcomitrella patens subsp. patens]
gi|162663848|gb|EDQ50591.1| circadian clock protein PRR3 [Physcomitrella patens subsp. patens]
Length = 774
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 9/85 (10%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVI---------MMSLHDSISMVLKCMLK 138
DLVLT+V +P +SG LL+ +M+ + CK +P++ +MS +DS+ +V +C+ K
Sbjct: 21 FDLVLTDVVMPCLSGVGLLSKMMKREACKRVPIVSELSYMLDAVMSSYDSLDIVFRCISK 80
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA D+L+KPVR+NELRNLWQHVWR+
Sbjct: 81 GACDYLVKPVRKNELRNLWQHVWRK 105
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 62/140 (44%), Gaps = 45/140 (32%)
Query: 600 NQSSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVP-------QNLNGCTLFIHDG 652
N ++G NG N S+SG+ + ++ + G G P N G T DG
Sbjct: 566 NGYGSTGNGNGSMNGSASGSNTGVNNGQN-----GLGVTPMANANSGNNGVGGTDPAMDG 620
Query: 653 FNGISARHSSQ-----RDAALTKFRLKRKDRCYDKKV----------------------- 684
+G + + Q R+AAL KFR KRK+RC++KKV
Sbjct: 621 VSGGNGLCTEQIRFARREAALNKFRQKRKERCFEKKVQASCIWAAVASDGHHGASVCGEK 680
Query: 685 -----RYQSRKSLAEQRPRV 699
RYQSRK LAEQRPRV
Sbjct: 681 RGCVVRYQSRKKLAEQRPRV 700
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LRKC Y V A + L+ R + D+V+++V +P +
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNMPDMD 69
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS+ S V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 70 GFKLLEHIGLEMD----LPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 161 WRR 163
+R+
Sbjct: 126 YRK 128
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LR+C Y V A L+ R D+VL++V +P +
Sbjct: 43 LRVLVVDDDTTCLRILEQMLRRCLYHVTTCSQAKVALNLLRERKGCFDVVLSDVHMPDMD 102
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS S V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 103 GFKLLEHVGLEMD----LPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHV 158
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSRTS 220
R+ ++ H G++ +N+ + D +S N+G+E V Q R++
Sbjct: 159 VRKKW-------HENKEIEHS-GSLEDNDRHKRGNEDAEYTSSVNEGTEGVLKGQKRRSN 210
Query: 221 S 221
S
Sbjct: 211 S 211
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LRKC Y V A + L+ R + D+V+++V +P +
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNMPDMD 69
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS+ S V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 70 GFKLLEHIGLEMD----LPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 161 WRR 163
+R+
Sbjct: 126 YRK 128
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LRKC Y V A + L+ R + D+V+++V +P +
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNMPDMD 69
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS+ S V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 70 GFKLLEHIGLEMD----LPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 161 WRR 163
+R+
Sbjct: 126 YRK 128
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLRKC Y V + A E L+ + DLV+++V +P +
Sbjct: 21 MRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMPDMD 80
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 81 GFKLLELVGLEMD----LPVIMLSSHGDKEFVYKGITHGAVDYLLKPVRLEELKNIWQHV 136
Query: 161 WRR 163
RR
Sbjct: 137 IRR 139
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LLR C Y V + A E L+ + DLV+++V++P +
Sbjct: 17 MRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLELVGLEMD----LPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELKNIWQHV 132
Query: 161 WR 162
R
Sbjct: 133 VR 134
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLR+C Y V A + A + L+ DLV+++V +P +
Sbjct: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITALKLLRENKDMFDLVISDVHMPDMD 85
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++ VLK + GA D+L+KPVR ELRN+WQHV
Sbjct: 86 GFKLLELVGLEMD----LPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNVWQHV 141
Query: 161 WRR 163
RR
Sbjct: 142 VRR 144
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL+V+ D +T I+ A+LR+C Y V A L+ + DLV+++V +P +
Sbjct: 35 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 94
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS + V+K + GA D+L+KPVR ELRN+WQH+
Sbjct: 95 GFKLLELVGLEMD----LPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHL 150
Query: 161 WRR 163
R+
Sbjct: 151 VRK 153
>gi|34979117|gb|AAQ83694.1| pseudo-response regulator protein [Oryza sativa Indica Group]
Length = 640
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 86 HSIDLVLTEVELPSISGFALLTLVMEHDVCKNI-PVIMMSLHDSISMVLKCMLKGAADFL 144
+SI VLTEV +P +SG +LL+ +M I PVIMMS +D++ V KC+ KGA DFL
Sbjct: 3 NSIVFVLTEVVMPGVSGISLLSRIMNPQYFARIFPVIMMSSNDAMGTVFKCLSKGAVDFL 62
Query: 145 IKPVRRNELRNLWQHVWRR 163
+KP+R+NEL+NLWQHVWRR
Sbjct: 63 VKPIRKNELKNLWQHVWRR 81
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 580 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 623
>gi|384250534|gb|EIE24013.1| hypothetical protein COCSUDRAFT_65695 [Coccomyxa subellipsoidea
C-169]
Length = 1818
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCR-----PHSIDLVLTEVE 96
LRVL+V++ S RQ + ALLRKC Y+V V A + LK + +DL+L E +
Sbjct: 751 LRVLVVDSKASARQEVVALLRKCTYQVMEVKSTAEALQLLKDQQARDGAPGVDLILKEHD 810
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
P+ + LL +E DV + +PV++MS + +++ C+ GAAD++I+P+R NELRNL
Sbjct: 811 PPAANACRLLRRTLEDDVLRTVPVVVMSSQEDRDVMVACLQLGAADYMIRPLRHNELRNL 870
Query: 157 WQHV--WRRHSLL 167
W V WRR L
Sbjct: 871 WARVYWWRRAFYL 883
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVR 705
+R AL K++ KRK+ + KK+RY+SRK LA+ RPRVKGQFVR
Sbjct: 1601 RRMQALHKYKQKRKNLNFTKKIRYESRKQLAQARPRVKGQFVR 1643
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL+V+ D +T I+ A+LR+C Y V A L+ + DLV+++V +P +
Sbjct: 1 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 60
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS + V+K + GA D+L+KPVR ELRN+WQH+
Sbjct: 61 GFKLLELVGLEMD----LPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHL 116
Query: 161 WRR 163
R+
Sbjct: 117 VRK 119
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D +I++ +L+KCGY V + + A E L+ + D+VL++V +P +
Sbjct: 12 LRVLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYLRTKKEEFDIVLSDVHMPDMD 71
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL + D+ +IPV+MMS++ S+VL+ ++ GA D+L+KPVR +EL+N+WQHV
Sbjct: 72 GFKLLEQI-ALDI--DIPVLMMSVNADQSVVLRGIIHGAVDYLLKPVRIHELKNIWQHVV 128
Query: 162 RRH 164
R++
Sbjct: 129 RKN 131
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLR+C YRV + A L+ DLV+++V +P +
Sbjct: 21 MRVLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVALRMLRQNRDLFDLVISDVHMPDMD 80
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++ V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 81 GFKLLELVGLEMD----LPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNIWQHV 136
Query: 161 WRR 163
RR
Sbjct: 137 VRR 139
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLRKC Y V + A E L+ + DLV+++V +P +
Sbjct: 11 MRVLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEMLRKNRNKFDLVISDVNMPDMD 70
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V++ +++GA D+L KPVR EL+N+WQHV
Sbjct: 71 GFKLLELVGLEMD----LPVIMLSGYGDKERVMRGVIQGACDYLTKPVRIEELQNIWQHV 126
Query: 161 WRR 163
RR
Sbjct: 127 LRR 129
>gi|224111430|ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa]
Length = 663
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 13/178 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +++ +L +C Y V AA + L+ R D+VL++V +P +
Sbjct: 38 LRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMD 97
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS S V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 98 GFKLLELVGLEMD----LPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHV 153
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSR 218
R+ N + G+ +N+ + D +S N+G+E V Q R
Sbjct: 154 IRKK--------WNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKR 203
>gi|298103720|emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 13/178 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +++ +L +C Y V AA + L+ R D+VL++V +P +
Sbjct: 38 LRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMD 97
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS S V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 98 GFKLLELVGLEMD----LPVIMMSADGRTSAVMRGIKHGACDYLIKPIREEELKNIWQHV 153
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSR 218
R+ N + G+ +N+ + D +S N+G+E V Q R
Sbjct: 154 IRKK--------WNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKR 203
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+L V+ D +++ LLRKC Y V + A E L+ + DLV+++V +P +
Sbjct: 21 MRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMPDMD 80
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 81 GFKLLELVGLEMD----LPVIMLSSHGDKEFVYKGVTHGAVDYLLKPVRMEELKNIWQHV 136
Query: 161 WRR 163
RR
Sbjct: 137 IRR 139
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ +LLR C Y V A E L+ + DLV+++V++P +
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHV 132
Query: 161 WR 162
R
Sbjct: 133 VR 134
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ +LLR C Y V A E L+ + DLV+++V++P +
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHV 132
Query: 161 WR 162
R
Sbjct: 133 VR 134
>gi|302805346|ref|XP_002984424.1| hypothetical protein SELMODRAFT_16707 [Selaginella moellendorffii]
gi|300147812|gb|EFJ14474.1| hypothetical protein SELMODRAFT_16707 [Selaginella moellendorffii]
Length = 73
Score = 103 bits (257), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/72 (61%), Positives = 58/72 (80%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
IDLVLT+V +P +SG LL+ +M H + +PV+MMS HDS ++V KC+ KGAADFL+KP
Sbjct: 2 IDLVLTDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKP 61
Query: 148 VRRNELRNLWQH 159
VR+NEL+NLWQH
Sbjct: 62 VRKNELKNLWQH 73
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LR+C Y V ++A + L+ + DLV+++V +P +
Sbjct: 18 MRVLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISALKMLRENKNKFDLVISDVHMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMLSAYSDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 133
Query: 161 WRR 163
RR
Sbjct: 134 IRR 136
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ VL+V+ + R + S+LLR+CGYRV G A E L+ R ++LT+V +P I
Sbjct: 30 VHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLR-RGTEFHMLLTDVMMPGID 88
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G ALL +V + +++PV+MMS ++ V +C+ GA D+L+KPV R ++++W HVW
Sbjct: 89 GPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPVSRRAVKHMWTHVW 148
Query: 162 RRHSL-LGGHVPQ 173
R+ + + VPQ
Sbjct: 149 RKSQVNVSRTVPQ 161
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLRKC Y V + A L+ + DLV+++V +P I
Sbjct: 19 MRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDVNMPDID 78
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 79 GFKLLELVGLEMD----LPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHV 134
Query: 161 WRRHSL 166
RR +
Sbjct: 135 VRRKNF 140
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 8/129 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP---HSIDLVLTEVELP 98
L+VL+V+ D +++SA+L++C Y V G A L+ R H DLVL++V +P
Sbjct: 34 LKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDALLLLRDRQEHNHQFDLVLSDVYMP 93
Query: 99 SISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLW 157
+ GF LL + +E D +PVIMMS + +VL+ + GA DFLIKPVR ELRN+W
Sbjct: 94 DMDGFKLLEHIGLELD----LPVIMMSSNGDTDVVLRGVTHGAVDFLIKPVRVEELRNVW 149
Query: 158 QHVWRRHSL 166
QHV RR SL
Sbjct: 150 QHVVRRRSL 158
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LR+C Y V A L+ + D+VL++V +P +
Sbjct: 33 LRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLSDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ LL V +E D +PVIMMS S V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 93 GYKLLEHVGLEMD----LPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHV 148
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSRTS 220
R+ N + + G++ +N+ D +S N+G+E + Q R
Sbjct: 149 VRKK--------WNENKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKRRD 200
Query: 221 S 221
S
Sbjct: 201 S 201
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLR+C Y V + + A + L+ DLV+++V +P +
Sbjct: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMD 85
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++ V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 86 GFKLLELVGLEMD----LPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHV 141
Query: 161 WRR 163
RR
Sbjct: 142 VRR 144
>gi|218197710|gb|EEC80137.1| hypothetical protein OsI_21925 [Oryza sativa Indica Group]
Length = 696
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLR+C Y V + + A + L+ DLV+++V +P +
Sbjct: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMD 85
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++ V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 86 GFKLLELVGLEMD----LPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHV 141
Query: 161 WRR 163
RR
Sbjct: 142 VRR 144
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ H D+V+++V +P +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 97 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 161 WRR 163
R+
Sbjct: 153 VRK 155
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLR+C Y V + A + L+ + DLV+++V +P +
Sbjct: 20 MRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKMLRENRDTYDLVISDVHMPDMD 79
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++ V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 80 GFKLLELVGLEMD----LPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQHV 135
Query: 161 WRR 163
RR
Sbjct: 136 VRR 138
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ H D+V+++V +P +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 97 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 161 WRR 163
R+
Sbjct: 153 VRK 155
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ H D+V+++V +P +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 97 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 161 WRR 163
R+
Sbjct: 153 VRK 155
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ H D+V+++V +P +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 97 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 161 WRR 163
R+
Sbjct: 153 VRK 155
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLR+C Y V + A L+ DLV+++V +P +
Sbjct: 12 MRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDVHMPDMD 71
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 72 GFKLLELVGLEMD----LPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQHV 127
Query: 161 WRR 163
R+
Sbjct: 128 IRK 130
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ H D+V+++V +P +
Sbjct: 35 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 94
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 95 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 150
Query: 161 WRR 163
R+
Sbjct: 151 VRK 153
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + I+ LLR+C Y V + A + L+ + D+V+++V +P +
Sbjct: 18 MRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDVHMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 133
Query: 161 WRR 163
RR
Sbjct: 134 IRR 136
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + I+ LLR+C Y V + A + L+ + D+V+++V +P +
Sbjct: 18 MRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDVHMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 133
Query: 161 WRR 163
RR
Sbjct: 134 IRR 136
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDVNMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 77 GFKLLELVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 161 WRR 163
+R+
Sbjct: 133 FRK 135
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A + L+ R + D+V+++V +P +
Sbjct: 18 LRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDVNMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 78 GFKLLEQVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
Query: 161 WRR 163
+R+
Sbjct: 134 FRK 136
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 3/122 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L VL+V+ D +++ +L+ C Y+V A A E L+ R D+VL++V +P +
Sbjct: 5 LGVLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEEFDIVLSDVHMPDMD 64
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL ++ + ++ +PV+MMS + S+VL+ ++ GA D+L+KPVR ELRN+WQHV
Sbjct: 65 GFKLLEII-QFELA--LPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHVV 121
Query: 162 RR 163
RR
Sbjct: 122 RR 123
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLR+C Y V A + A L+ DLV+++V +P +
Sbjct: 24 MRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIALRMLRENRDMFDLVISDVHMPDMD 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++ V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 84 GFKLLELVGLEMD----LPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELKNIWQHV 139
Query: 161 WRR 163
RR
Sbjct: 140 VRR 142
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LL++C Y V + A L+ DLV+++V +P +
Sbjct: 18 MRVLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKALALLREHKDKFDLVISDVHMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + MV+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMLSANGDTKMVMKGISHGACDYLLKPVRMEELKNIWQHV 133
Query: 161 WRR 163
RR
Sbjct: 134 IRR 136
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D +T +II + +C YRV + A L+ R D+VL++V +P +
Sbjct: 14 LRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMPDMD 73
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ LL V +E D +PVIMMS + S V+K + GA D+LIKPVR ELRN+WQHV
Sbjct: 74 GYKLLEHVGLEMD----LPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHV 129
Query: 161 WRR 163
R+
Sbjct: 130 VRK 132
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLR+C Y V A + A L+ DLV+++V +P +
Sbjct: 21 MRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRMLRENRDMFDLVISDVHMPDMD 80
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 81 GFKLLELVGLEMD----LPVIMLSGNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHV 136
Query: 161 WRR 163
RR
Sbjct: 137 VRR 139
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +LR+C Y V A L+ + D+VL++V +P +
Sbjct: 33 LRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLSDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ LL V +E D +PVIMMS S V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 93 GYKLLEHVGLEMD----LPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHV 148
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSRTS 220
R+ N + + G++ +N+ D +S N+G+E + Q R
Sbjct: 149 VRKK--------WNENKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKRRD 200
Query: 221 S 221
S
Sbjct: 201 S 201
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LL++C Y V A E L+ + DLV+++V++P +
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHV 132
Query: 161 WR 162
R
Sbjct: 133 VR 134
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D +T +II + +C YRV + A L+ R D+VL++V +P +
Sbjct: 12 LRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMPDMD 71
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ LL V +E D +PVIMMS + S V+K + GA D+LIKPVR ELRN+WQHV
Sbjct: 72 GYKLLEHVGLEMD----LPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHV 127
Query: 161 WRR 163
R+
Sbjct: 128 VRK 130
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LL +C Y V A E L+ + DLV+++V++P +
Sbjct: 17 MRVLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHV 132
Query: 161 WR 162
R
Sbjct: 133 VR 134
>gi|343407540|gb|AEM23771.1| RRB1 type-b response regulator [Nicotiana tabacum]
Length = 654
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D +I+ +LRKC Y V A L+ R S D+VL++V +P +
Sbjct: 23 LRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVALNLLRERRGSFDVVLSDVHMPDMD 82
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +P+IMMS ++V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 83 GFKLLELVGLEMD----LPIIMMSGDGRTNLVMRGVQHGACDYLIKPIRDEELKNIWQHV 138
Query: 161 WRR 163
R+
Sbjct: 139 VRK 141
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ H D+V+++V +P +
Sbjct: 35 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 94
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 95 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 150
Query: 161 WRR 163
R+
Sbjct: 151 VRK 153
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
++ VL+V+ + R + S +LRKCGYRV G A E L+ R +L+LT+V +P I
Sbjct: 50 MIHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLR-RGTEFNLLLTDVMMPDI 108
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G LL V H +PVIMMS + +V +C+ GA D+L+KPV +++ LWQHV
Sbjct: 109 DGPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHV 168
Query: 161 WRRH 164
WR+
Sbjct: 169 WRKQ 172
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 83/144 (57%), Gaps = 10/144 (6%)
Query: 21 EKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWET 80
E+D + VR ++ + +RVL V+ D +++ LLR+C Y V + A
Sbjct: 5 ERDAAVGRVRDQFP-----VGMRVLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVALSM 59
Query: 81 LKCRPHSIDLVLTEVELPSISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKG 139
L+ DLV+++V +P + GF LL LV +E D +PVIM+S++ V+K + G
Sbjct: 60 LRQNRDLFDLVISDVHMPDMDGFKLLELVGLEMD----LPVIMLSVNGETKTVMKGITHG 115
Query: 140 AADFLIKPVRRNELRNLWQHVWRR 163
A D+L+KPVR ELRN+WQHV RR
Sbjct: 116 ACDYLLKPVRLEELRNIWQHVVRR 139
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLR+C Y V + A + L+ DLV+++V +P +
Sbjct: 28 MRVLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLLRENRDMFDLVISDVHMPDMD 87
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++ V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 88 GFKLLELVGLEMD----LPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQHV 143
Query: 161 WRR 163
RR
Sbjct: 144 VRR 146
>gi|51968898|dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana]
Length = 664
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +L C YRV +A L+ + D+V+++V +P +
Sbjct: 28 LRVLVVDGDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 88 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143
Query: 161 WRRHSLLGGHVPQNLHDVY-HKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSR 218
R+ +N +V H GG+I + + + N S + +SSR
Sbjct: 144 VRKK--------RNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSR 194
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 16/150 (10%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERKDGYDIVISDVNMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 77 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 161 WRR----------HSLLGG-HVPQNLHDVY 179
R+ H ++ G H+ +N+ D Y
Sbjct: 133 LRKKIQEGRDIEGHDVIEGIHILRNVADRY 162
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LL +C Y V A + L+ + DLV+++V++P +
Sbjct: 14 MRVLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLLRENKNKFDLVISDVDMPDMD 73
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 74 GFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHV 129
Query: 161 WRR 163
R+
Sbjct: 130 VRK 132
>gi|125598040|gb|EAZ37820.1| hypothetical protein OsJ_22159 [Oryza sativa Japonica Group]
Length = 713
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ ++ ALLR+C Y+ D A L+ RP DLV+++V + +
Sbjct: 16 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 75
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIM S + + ++K + GA D+L+KPV +++N+WQHV
Sbjct: 76 GFKLLELIGLEMD----LPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 131
Query: 161 WRRHSL 166
WR+ L
Sbjct: 132 WRKRKL 137
>gi|125556273|gb|EAZ01879.1| hypothetical protein OsI_23901 [Oryza sativa Indica Group]
Length = 684
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ ++ ALLR+C Y+ D A L+ RP DLV+++V + +
Sbjct: 16 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 75
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIM S + + ++K + GA D+L+KPV +++N+WQHV
Sbjct: 76 GFKLLELIGLEMD----LPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 131
Query: 161 WRRHSL 166
WR+ L
Sbjct: 132 WRKRKL 137
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 77 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 161 WRR 163
+R+
Sbjct: 133 FRK 135
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ + +I+ LL +C Y+V A A E L+ + D+V+T+V++P +
Sbjct: 148 LRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVITDVKMPDMD 207
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL ++ +E D IPVIM S++D S VLK + GA D+L+KPVR E++N+WQHV
Sbjct: 208 GFTLLKIIGLEMD----IPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHV 263
Query: 161 WRRHSLLGG 169
R++ G
Sbjct: 264 VRKNLFDSG 272
>gi|125552240|gb|EAY97949.1| hypothetical protein OsI_19867 [Oryza sativa Indica Group]
Length = 315
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
E F P + +RVLL++ + +II+ LL CGY+V A E L P S D+VLT
Sbjct: 18 EEFSP-VGMRVLLIDESTTYLKIITKLLLNCGYKVTPKTAARDAVEELHENPWSYDMVLT 76
Query: 94 EVELPS-ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV P+ I GF LL ++PV++ S D VLKC+ GA D+L+KP+R E
Sbjct: 77 EVHAPAGIDGFNLLQYAGTD---MDLPVVVFSADDDKRTVLKCVNSGACDYLVKPLRHEE 133
Query: 153 LRNLWQHVWRRHSLLGG 169
L+N+WQHV+RR+ GG
Sbjct: 134 LKNIWQHVYRRNLRSGG 150
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLLRERKDGYDIVISDVNMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 77 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 161 WRR 163
+R+
Sbjct: 133 FRK 135
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LLRKC Y V+ A + L+ DLV+++V +P +
Sbjct: 20 MRVLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMALKMLRENKDRFDLVISDVHMPDMD 79
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIM+S + +V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 80 GFKLLDQVGLEMD----LPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQHV 135
Query: 161 WRRH 164
RR
Sbjct: 136 IRRR 139
>gi|51535423|dbj|BAD37322.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|51535645|dbj|BAD37619.1| putative response regulator 9 [Oryza sativa Japonica Group]
Length = 694
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ ++ ALLR+C Y+ D A L+ RP DLV+++V + +
Sbjct: 16 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 75
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIM S + + ++K + GA D+L+KPV +++N+WQHV
Sbjct: 76 GFKLLELIGLEMD----LPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 131
Query: 161 WRRHSL 166
WR+ L
Sbjct: 132 WRKRKL 137
>gi|297606271|ref|NP_001058204.2| Os06g0647200 [Oryza sativa Japonica Group]
gi|255677276|dbj|BAF20118.2| Os06g0647200 [Oryza sativa Japonica Group]
Length = 663
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ ++ ALLR+C Y+ D A L+ RP DLV+++V + +
Sbjct: 31 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 90
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIM S + + ++K + GA D+L+KPV +++N+WQHV
Sbjct: 91 GFKLLELIGLEMD----LPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 146
Query: 161 WRRHSL 166
WR+ L
Sbjct: 147 WRKRKL 152
>gi|118790775|tpd|FAA00258.1| TPA: response regulator [Oryza sativa Japonica Group]
Length = 690
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ ++ ALLR+C Y+ D A L+ RP DLV+++V + +
Sbjct: 16 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 75
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIM S + + ++K + GA D+L+KPV +++N+WQHV
Sbjct: 76 GFKLLELIGLEMD----LPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 131
Query: 161 WRRHSL 166
WR+ L
Sbjct: 132 WRKRKL 137
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +++ +LR+C Y V AA + L+ R D+VL++V +P +
Sbjct: 9 LRVLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMD 68
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS S V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 69 GFKLLELVGLEMD----LPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQHV 124
Query: 161 WRR 163
R+
Sbjct: 125 IRK 127
>gi|302799824|ref|XP_002981670.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
gi|300150502|gb|EFJ17152.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
Length = 413
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L+VL+V+ D ++ +LR+C Y V AA L+ R S D+V+++V +P +
Sbjct: 9 LKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISDVHMPDMD 68
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL L+ + IPVIMMS V+K ++ GA D+L+KPVR ELRN+WQHV
Sbjct: 69 GFKLLELI---GLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIWQHVV 125
Query: 162 RRHS 165
RR +
Sbjct: 126 RRRT 129
>gi|302768857|ref|XP_002967848.1| type B response regulator [Selaginella moellendorffii]
gi|300164586|gb|EFJ31195.1| type B response regulator [Selaginella moellendorffii]
Length = 414
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L+VL+V+ D ++ +LR+C Y V AA L+ R S D+V+++V +P +
Sbjct: 9 LKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISDVHMPDMD 68
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL L+ + IPVIMMS V+K ++ GA D+L+KPVR ELRN+WQHV
Sbjct: 69 GFKLLELI---GLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIWQHVV 125
Query: 162 RRHS 165
RR +
Sbjct: 126 RRRT 129
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 77 GFKLLGHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 161 WRR 163
+R+
Sbjct: 133 FRK 135
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ + +I+ LL +C Y+V A A E L+ + D+V+T+V++P +
Sbjct: 156 LRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRXNFDIVITDVKMPDMD 215
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL ++ +E D IPVIM S++D S VLK + GA D+L+KPVR E++N+WQHV
Sbjct: 216 GFTLLKIIGLEMD----IPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHV 271
Query: 161 WRRHSLLGG 169
R++ G
Sbjct: 272 VRKNLFDSG 280
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLR+C Y + A L+ DLV+++V +P +
Sbjct: 18 MRVLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKALALLREHKDKFDLVISDVHMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKNIWQHV 133
Query: 161 WRR 163
RR
Sbjct: 134 IRR 136
>gi|298103718|emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +++ + R+C Y V AA + L+ R D+VL++V +P +
Sbjct: 38 LRVLVVDDDITCLRLLEKMPRRCLYHVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMD 97
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS S V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 98 GFKLLELVGLEMD----LPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQHV 153
Query: 161 WRR 163
R+
Sbjct: 154 IRK 156
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +L C YRV +A L+ + D+V+++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 88 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143
Query: 161 WRRHSLLGGHVPQNLHDVY-HKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSR 218
R+ +N +V H GG+I + + + N S + +SSR
Sbjct: 144 VRKK--------RNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSR 194
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 77 GFKLLEHVGLEMD----LPVIMMSVDGETSKVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 161 WRR 163
+R+
Sbjct: 133 FRK 135
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +L +C Y V A L+ D+VL++V +P +
Sbjct: 18 LRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDVCMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS + S+V+K ++ GA D+L+KP+R EL+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQHV 133
Query: 161 WRR 163
+RR
Sbjct: 134 FRR 136
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +L +C Y V A L+ D+VL++V +P +
Sbjct: 18 LRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDVCMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS + S+V+K ++ GA D+L+KP+R EL+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQHV 133
Query: 161 WRR 163
+RR
Sbjct: 134 FRR 136
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDVNMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQHV 132
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKG 207
+R+ G V + Y + E M S S ++ Q N G
Sbjct: 133 FRKKIHEGKDV-----ESYE---CMREIQMIMSRSDEFDDGHQLNGG 171
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDVNMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQHV 132
Query: 161 WRR 163
+R+
Sbjct: 133 FRK 135
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 18 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDVYMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 78 GFKLLEQVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
Query: 161 WRR 163
+R+
Sbjct: 134 FRK 136
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 14/179 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +L C YRV A L+ + D+V+++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 88 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143
Query: 161 WRRHSLLGGHVPQNLHDVY-HKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSR 218
R+ +N +V H GG+I + + + N S + +SSR
Sbjct: 144 VRKK--------RNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSR 194
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D ++ +++ L C Y V + A E L+ + DL++++V +P +
Sbjct: 21 MRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDLIISDVNMPEMD 80
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +P IM+S HD V+K ++KGA D+L+KP+R EL+N+WQHV
Sbjct: 81 GFKLLEQVGLEMD----LPFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHV 136
Query: 161 WRR 163
R+
Sbjct: 137 VRK 139
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+VL++V +P +
Sbjct: 33 LRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D ++V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 93 GFKLLEHIGLEMD----LPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSD--YAASSQKNKGSEK 210
R+ +N + G + E + S+D Y++S+ + K S+K
Sbjct: 149 VRKR--------KNSWKDLRQSGGLDERDREKKASTDANYSSSTNEGKSSKK 192
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +++ LLR+C Y V A L+ DLV+++V +P +
Sbjct: 22 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 81
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V+K + GA D+L+KPVR +L+ +WQHV
Sbjct: 82 GFKLLELVGLEMD----LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 137
Query: 161 WRRHS 165
RR++
Sbjct: 138 IRRNT 142
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+ C Y V A L+ + D+VL++V +P +
Sbjct: 37 LRVLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVLSDVHMPDMD 96
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS D ++V+K ++ GA D+LIKPVR LRNLWQHV
Sbjct: 97 GFKLLEQVGLEMD----LPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNLWQHV 152
Query: 161 WRR 163
R+
Sbjct: 153 VRK 155
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+V+++V +P +
Sbjct: 33 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIALSLLRENKNGFDIVISDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS D S+V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 93 GFKLLEQVGLEMD----LPVIMMSADDGQSVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
R+ +N + G++ E + S D SS N+G+ K
Sbjct: 149 VRKK--------KNEWKDVEQSGSVEEGDRQQKPSEDADYSSSANEGTWK 190
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +L C YRV A L+ + D+V+++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 88 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143
Query: 161 WRR 163
R+
Sbjct: 144 VRK 146
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+VL++V +P +
Sbjct: 33 LRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D ++V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 93 GFKLLEHIGLEMD----LPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSD--YAASSQKNKGSEK 210
R+ +N + G + E + S+D Y++S+ + K S+K
Sbjct: 149 VRKR--------KNSWKDLRQSGGLDERDREKKASTDANYSSSTNEGKSSKK 192
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 99.0 bits (245), Expect = 9e-18, Method: Composition-based stats.
Identities = 54/120 (45%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LR+L+V+ D +++ +LRKC Y V + A L+ + DLVL++V +P +
Sbjct: 5 LRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYMPDMD 64
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS + S VL+ + GA D+LIKPVR ELRNLWQHV
Sbjct: 65 GFRLLELVGLEMD----LPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQHV 120
>gi|218191747|gb|EEC74174.1| hypothetical protein OsI_09283 [Oryza sativa Indica Group]
Length = 688
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LL +C Y V A + L+ DLV+++V +P +
Sbjct: 24 MRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDVHMPDMD 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++ VLK + GA D+L+KPVR ELRN+WQHV
Sbjct: 84 GFKLLELVGLEMD----LPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQHV 139
Query: 161 WRR 163
RR
Sbjct: 140 IRR 142
>gi|302794410|ref|XP_002978969.1| type B response regulator [Selaginella moellendorffii]
gi|300153287|gb|EFJ19926.1| type B response regulator [Selaginella moellendorffii]
Length = 580
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ D + +I++ +LRKC Y V A L+ DL++++V +P +
Sbjct: 24 LRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVFMPDMD 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIM S + +V+K ++ GA D+LIKPVR ELRN+WQHV
Sbjct: 84 GFKLLEYVGLEMD----LPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQHV 139
Query: 161 WRR 163
R+
Sbjct: 140 VRK 142
>gi|115449219|ref|NP_001048389.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|47497030|dbj|BAD19083.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|47497239|dbj|BAD19284.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113537920|dbj|BAF10303.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|118790756|tpd|FAA00256.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215704573|dbj|BAG94206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767879|dbj|BAH00108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623845|gb|EEE57977.1| hypothetical protein OsJ_08721 [Oryza sativa Japonica Group]
Length = 688
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D +++ LL +C Y V A + L+ DLV+++V +P +
Sbjct: 24 MRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDVHMPDMD 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S++ VLK + GA D+L+KPVR ELRN+WQHV
Sbjct: 84 GFKLLELVGLEMD----LPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQHV 139
Query: 161 WRR 163
RR
Sbjct: 140 IRR 142
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 77 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 161 WRR 163
R+
Sbjct: 133 LRK 135
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 15/172 (8%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+VL++V +P +
Sbjct: 29 LRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEVALSLLRENKNGFDIVLSDVHMPDMD 88
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D +V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 89 GFKLLEHIGLEMD----LPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQHV 144
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMAS--SHSSDYAASSQKNKGSEK 210
R+ L DV + G++ E + S DY++S + + S+K
Sbjct: 145 IRKRK-------NGLRDV-EQSGSVEEGDQPPKVSDDGDYSSSVNEARSSKK 188
>gi|302824731|ref|XP_002994006.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
gi|300138168|gb|EFJ04946.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
Length = 376
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ D + +I++ +LRKC Y V A L+ DL++++V +P +
Sbjct: 14 LRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVFMPDMD 73
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIM S + +V+K ++ GA D+LIKPVR ELRN+WQHV
Sbjct: 74 GFKLLEYVGLEMD----LPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQHV 129
Query: 161 WRR 163
R+
Sbjct: 130 VRK 132
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+ C Y V A + L+ + D+V+++V +P +
Sbjct: 36 LRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLLRDNRNGYDIVISDVHMPDMD 95
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS ++V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 96 GFKLLEQVGLEMD----LPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIEALKNIWQHV 151
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
R+ G H + Y + G++ + + D SS N+G+ K
Sbjct: 152 VRK----GKH--EWKEKDYEQSGSVEDGERQQKPNEDVDYSSSANEGNWK 195
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L++C Y V A L+ R D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDVFMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 77 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 161 WRR 163
+R+
Sbjct: 133 FRK 135
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LL +C Y V A + L+ + DLV+++V +P +
Sbjct: 26 MRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMPDMD 85
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V+K + GA D+L+KPVR +LR +WQHV
Sbjct: 86 GFKLLELVGLEMD----LPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQHV 141
Query: 161 WRRHS 165
RR S
Sbjct: 142 VRRRS 146
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LL +C Y V A + L+ + DLV+++V +P +
Sbjct: 26 MRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMPDMD 85
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V+K + GA D+L+KPVR +LR +WQHV
Sbjct: 86 GFKLLELVGLEMD----LPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQHV 141
Query: 161 WRRHS 165
RR S
Sbjct: 142 VRRRS 146
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LL +C Y V A + L+ + DLV+++V +P +
Sbjct: 26 MRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMPDMD 85
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V+K + GA D+L+KPVR +LR +WQHV
Sbjct: 86 GFKLLELVGLEMD----LPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQHV 141
Query: 161 WRRHS 165
RR S
Sbjct: 142 VRRRS 146
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LL +C Y V A + L+ DLV+++V +P +
Sbjct: 29 MRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMPDMD 88
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V+K + GA D+L+KPVR +LR +WQHV
Sbjct: 89 GFKLLELVGLEMD----LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHV 144
Query: 161 WRR 163
RR
Sbjct: 145 IRR 147
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +++ LL+ C Y V A + L+ + DLV+++V +P +
Sbjct: 28 MRVLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMPDMD 87
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V+K + GA D+L+KPVR +LR +WQHV
Sbjct: 88 GFKLLELVGLEMD----LPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQHV 143
Query: 161 WRRHS 165
RR S
Sbjct: 144 VRRRS 148
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LL +C Y V A + L+ DLV+++V +P +
Sbjct: 29 MRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMPDMD 88
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V+K + GA D+L+KPVR +LR +WQHV
Sbjct: 89 GFKLLELVGLEMD----LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHV 144
Query: 161 WRR 163
RR
Sbjct: 145 IRR 147
>gi|339778525|gb|AEK06144.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
ID++L+EV++P G +L +M + IPVIMMS D +S+V+KC+ GAAD+L+KP
Sbjct: 20 IDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKP 79
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAI 185
+R NEL NLW H+WRR ++ Q + D H GA+
Sbjct: 80 LRTNELLNLWTHMWRRRHMMPSF--QCVLDECHVCGAM 115
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 502 RREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 554
>gi|339778503|gb|AEK06133.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
ID++L+EV++P G +L +M + IPVIMMS D +S+V+KC+ GAAD+L+KP
Sbjct: 20 IDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKP 79
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAI 185
+R NEL NLW H+WRR ++ Q + D H GA+
Sbjct: 80 LRTNELLNLWTHMWRRRHMMPSF--QCVLDECHVCGAM 115
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 502 RREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 554
>gi|339778501|gb|AEK06132.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
ID++L+EV++P G +L +M + IPVIMMS D +S+V+KC+ GAAD+L+KP
Sbjct: 20 IDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKP 79
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAI 185
+R NEL NLW H+WRR ++ Q + D H GA+
Sbjct: 80 LRTNELLNLWTHMWRRRHMMPSF--QCVLDECHVCGAM 115
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 502 RREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 554
>gi|339778505|gb|AEK06134.1| timing of cab 1 [Populus balsamifera]
gi|339778507|gb|AEK06135.1| timing of cab 1 [Populus balsamifera]
gi|339778511|gb|AEK06137.1| timing of cab 1 [Populus balsamifera]
gi|339778513|gb|AEK06138.1| timing of cab 1 [Populus balsamifera]
gi|339778515|gb|AEK06139.1| timing of cab 1 [Populus balsamifera]
gi|339778523|gb|AEK06143.1| timing of cab 1 [Populus balsamifera]
gi|339778527|gb|AEK06145.1| timing of cab 1 [Populus balsamifera]
gi|339778531|gb|AEK06147.1| timing of cab 1 [Populus balsamifera]
gi|339778535|gb|AEK06149.1| timing of cab 1 [Populus balsamifera]
gi|339778539|gb|AEK06151.1| timing of cab 1 [Populus balsamifera]
gi|339778541|gb|AEK06152.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
ID++L+EV++P G +L +M + IPVIMMS D +S+V+KC+ GAAD+L+KP
Sbjct: 20 IDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKP 79
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAI 185
+R NEL NLW H+WRR ++ Q + D H GA+
Sbjct: 80 LRTNELLNLWTHMWRRRHMMPSF--QCVLDECHVCGAM 115
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 502 RREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 554
>gi|339778509|gb|AEK06136.1| timing of cab 1 [Populus balsamifera]
gi|339778517|gb|AEK06140.1| timing of cab 1 [Populus balsamifera]
gi|339778521|gb|AEK06142.1| timing of cab 1 [Populus balsamifera]
gi|339778529|gb|AEK06146.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
ID++L+EV++P G +L +M + IPVIMMS D +S+V+KC+ GAAD+L+KP
Sbjct: 20 IDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKP 79
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAI 185
+R NEL NLW H+WRR ++ Q + D H GA+
Sbjct: 80 LRTNELLNLWTHMWRRRHMMPSF--QCVLDECHVCGAM 115
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 502 RREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 554
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 13/168 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+V+++V +P +
Sbjct: 33 LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGYDIVISDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS ++ S+V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 93 GFKLLEHIGLEMD----LPVIMMSADEAKSVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGS 208
R+ +N + G++ E + S D SS N+G+
Sbjct: 149 VRKK--------RNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGN 188
>gi|339778519|gb|AEK06141.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
ID++L+EV++P G +L +M + IPVIMMS D +S+V+KC+ GAAD+L+KP
Sbjct: 20 IDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKP 79
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAI 185
+R NEL NLW H+WRR ++ Q + D H GA+
Sbjct: 80 LRTNELLNLWTHMWRRRHMMPSF--QCVLDECHVCGAM 115
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 502 RREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 554
>gi|339778533|gb|AEK06148.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
ID++L+EV++P G +L +M + IPVIMMS D +S+V+KC+ GAAD+L+KP
Sbjct: 20 IDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKP 79
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAI 185
+R NEL NLW H+WRR ++ Q + D H GA+
Sbjct: 80 LRTNELLNLWTHMWRRRHMMPSF--QCVLDECHVCGAM 115
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 502 RREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 554
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL V+ + +I+ LL +C Y+V A A E L+ + D+V+T+V++P +
Sbjct: 19 LRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVITDVKMPDMD 78
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL ++ +E D IPVIM S++D S VLK + GA D+L+KPVR E++N+WQHV
Sbjct: 79 GFTLLKIIGLEMD----IPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHV 134
Query: 161 WRRHSLLGG 169
R++ G
Sbjct: 135 VRKNLFDSG 143
>gi|339778537|gb|AEK06150.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
ID++L+EV++P G +L +M + IPVIMMS D +S+V+KC+ GAAD+L+KP
Sbjct: 20 IDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKP 79
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAI 185
+R NEL NLW H+WRR ++ Q + D H GA+
Sbjct: 80 LRTNELLNLWTHMWRRRHMMPSF--QCVLDECHVCGAM 115
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 502 RREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLN 554
>gi|293331705|ref|NP_001168046.1| uncharacterized protein LOC100381775 [Zea mays]
gi|223945677|gb|ACN26922.1| unknown [Zea mays]
Length = 210
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 103/242 (42%), Gaps = 56/242 (23%)
Query: 496 PHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKS--------GLQPAWSPNSSHQKEHHRFP 547
P GFIPVP + Y I ++Y +S G+ A ++S Q +H P
Sbjct: 4 PSYGFIPVPIPVGATMPYHYGAILQPVYYPQSPLMHCDSAGINKAAIQHASGQPNYHEAP 63
Query: 548 ISAS--------VHSNPDVHDSEQVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAG 599
S N +H S Q+ +GE P++ R
Sbjct: 64 GKPSHVLIEHKQSEENHQLHHSRQILRESGE-----------------PIDMARAHVDRA 106
Query: 600 NQ--SSNSGLCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGIS 657
NQ S + G+C G S SG + N N +GI
Sbjct: 107 NQTASCSQGICKG-----------------SGCTCSGEADI--NANTMVALESGNESGIQ 147
Query: 658 ARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE--TKDAN 715
S+R+AAL KFR+KRKDRC++KKVRY SRK LAEQRPRVKGQFV Q N T DA
Sbjct: 148 NGDRSRREAALMKFRMKRKDRCFEKKVRYHSRKKLAEQRPRVKGQFVSQKLNSATTTDAE 207
Query: 716 AD 717
AD
Sbjct: 208 AD 209
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 91/172 (52%), Gaps = 15/172 (8%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+VL++V +P +
Sbjct: 29 LRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMD 88
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D +V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 89 GFKLLEHIGLEMD----LPVIMMSADDGKQVVMKGVTHGACDYLIKPVRIEALKNIWQHV 144
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSD--YAASSQKNKGSEK 210
R L DV + G++ E + S D Y++S + K S+K
Sbjct: 145 VRMRK-------NGLRDV-EQSGSMEEGDRPPKGSDDGNYSSSVNEAKSSKK 188
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+VL++V +P +
Sbjct: 24 LRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRQNKNGFDIVLSDVHMPDMD 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS+ D ++V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 84 GFKLLEYIGLEMD----LPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRMEALKNIWQHV 139
Query: 161 WRR 163
R+
Sbjct: 140 VRK 142
>gi|298103716|emb|CBM42559.1| putative B-type response regulator 13 [Populus x canadensis]
Length = 670
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+V+++V +P +
Sbjct: 17 LRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRNGYDIVISDVHMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIMMS D ++V+K + GA D+LIKP+R L+N+WQHV
Sbjct: 77 GFKLLELIGLEMD----LPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQHV 132
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
R+ D+ G + S D SS N+GS K
Sbjct: 133 VRKRK-------NEWKDLEQSGSVEEGGDRPQKQSEDADYSSSANEGSWK 175
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +++ +LL +C Y V A L+ DLV+++V +P +
Sbjct: 21 MRVLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATALRMLRENKDRFDLVISDVHMPDMD 80
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + V+K + GA D+L+KPVR +L+ +WQHV
Sbjct: 81 GFKLLELVGLEMD----LPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 136
Query: 161 WRRHS 165
RR++
Sbjct: 137 VRRNT 141
>gi|303283994|ref|XP_003061288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457639|gb|EEH54938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 711
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 23/183 (12%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L VLLVE D ST + A+LR CG+ V +G A + L +IDLVLT++ +P +
Sbjct: 53 LSVLLVEDDHSTLVFVKAMLRSCGHSVTTATNGQEAIDALLDPSSAIDLVLTDIMMPEVD 112
Query: 102 GFALLTLVMEHD-VCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G L+ +V D ++IP+I+MS DS KC GA D+L+KPV++ ++ +L +H
Sbjct: 113 GLELMKIVQSSDKPFRSIPIIVMSTVDSDEFQAKCTEAGAQDYLVKPVKKAQMADLARHT 172
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVS-DAQSSRT 219
+GG G +S + + HS++ AS++ +G S D Q + T
Sbjct: 173 ------VGG------------GAGMSVDRI---HSNNSGASTETAQGRRGPSPDGQDATT 211
Query: 220 SSP 222
++P
Sbjct: 212 ATP 214
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 655 GISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDA 714
G SA + +R A+ +F KRK+R +DKKVRY SRK LAE RPRVKGQFVR +K+E DA
Sbjct: 602 GASATCAERRAEAIARFLKKRKERNFDKKVRYASRKRLAEARPRVKGQFVR-LKSE-GDA 659
Query: 715 NADG 718
+G
Sbjct: 660 GGEG 663
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+V+++V +P +
Sbjct: 33 LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D S+V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 93 GFKLLEHIGLEMD----LPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 161 WRR 163
R+
Sbjct: 149 VRK 151
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+V+++V +P +
Sbjct: 33 LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D S+V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 93 GFKLLEHIGLEMD----LPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 161 WRR 163
R+
Sbjct: 149 VRK 151
>gi|224106962|ref|XP_002314325.1| type-b response regulator [Populus trichocarpa]
gi|222863365|gb|EEF00496.1| type-b response regulator [Populus trichocarpa]
Length = 634
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+V+++V +P +
Sbjct: 27 LRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRNGYDIVISDVHMPDMD 86
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIMMS D ++V+K + GA D+LIKP+R L+N+WQHV
Sbjct: 87 GFKLLELIGLEMD----LPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQHV 142
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
R+ D+ G + S D SS N+GS K
Sbjct: 143 VRKRK-------NEWKDLEQSGSVEEGGDRQQKQSEDADYSSSANEGSWK 185
>gi|162460014|ref|NP_001104861.1| response regulator 8 [Zea mays]
gi|13661174|dbj|BAB41137.1| response regulator 8 [Zea mays]
gi|195656391|gb|ACG47663.1| two-component response regulator ARR1 [Zea mays]
Length = 684
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++VL+V+ D + ++ +L +C Y V P A L+ D+++++V +P +
Sbjct: 15 MKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS +V+K + GA D+LIKPVR EL+N+WQHV
Sbjct: 75 GFRLLELVGLEMD----LPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 130
Query: 161 WRR 163
R+
Sbjct: 131 VRK 133
>gi|357480191|ref|XP_003610381.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511436|gb|AES92578.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 593
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +++ L C Y V + A E L+ + DLV+++V +P +
Sbjct: 21 MRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDLVISDVSMPEMD 80
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +P IM+S +D V+K ++KGA D+L+KP+R EL+N+WQHV
Sbjct: 81 GFKLLEQVGLEID----LPFIMLSGNDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHV 136
Query: 161 WRR 163
R+
Sbjct: 137 VRK 139
>gi|414865594|tpg|DAA44151.1| TPA: putative two-component response regulator family protein
isoform 1 [Zea mays]
gi|414865595|tpg|DAA44152.1| TPA: putative two-component response regulator family protein
isoform 2 [Zea mays]
gi|414865596|tpg|DAA44153.1| TPA: putative two-component response regulator family protein
isoform 3 [Zea mays]
Length = 684
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++VL+V+ D + ++ +L +C Y V P A L+ D+++++V +P +
Sbjct: 15 MKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS +V+K + GA D+LIKPVR EL+N+WQHV
Sbjct: 75 GFRLLELVGLEMD----LPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 130
Query: 161 WRR 163
R+
Sbjct: 131 VRK 133
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 13/170 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ D+V+++V +P +
Sbjct: 33 LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D +V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 93 GFKLLEHIGLEMD----LPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
R+ +N + G++ + + S D SS N+G+ K
Sbjct: 149 VRKR--------KNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSANEGNWK 190
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ VLLV+ D R +++ +L+KC Y+V G A L+ R +L+LT+V +P +
Sbjct: 9 VHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALLE-RGTQFNLLLTDVMMPDVD 67
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL V + + +PV+MMS ++ V+ C+ GA D+L+KPV + ++++W HVW
Sbjct: 68 GPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPVTKKAVKHMWAHVW 127
Query: 162 RRHSLLGGHVPQ--NLHDV 178
RR VPQ N H+V
Sbjct: 128 RRKQRY-QMVPQFENGHEV 145
>gi|242041701|ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
gi|241922099|gb|EER95243.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
Length = 686
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++VL+V+ D + ++ +L C Y V P A L+ D+++++V +P +
Sbjct: 15 MKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS +V+K + GA D+LIKPVR EL+N+WQHV
Sbjct: 75 GFRLLELVGLEMD----LPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 130
Query: 161 WRR 163
R+
Sbjct: 131 VRK 133
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 13/170 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ D+V+++V +P +
Sbjct: 33 LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D +V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 93 GFKLLEHIGLEMD----LPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
R+ +N + G++ + + S D SS N+G+ K
Sbjct: 149 VRKR--------KNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSANEGNWK 190
>gi|168002194|ref|XP_001753799.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695206|gb|EDQ81551.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ + T ++ +L C YRV A L+ DLV+++V +P +
Sbjct: 50 LRVLVVDDEPVTLMVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFDLVISDVNMPDMD 109
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS + S V+K + GA D+L+KPVR+ ELRN+WQHV
Sbjct: 110 GFKLLELVGLEMD----LPVIMMSGNGETSAVMKGITHGACDYLLKPVRQKELRNIWQHV 165
Query: 161 WRR 163
R+
Sbjct: 166 VRK 168
>gi|357480195|ref|XP_003610383.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511438|gb|AES92580.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 597
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 28 VVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS 87
VV E F M RVL V+ D + +++ L C Y V + A E L+ +
Sbjct: 12 VVNVLGEGFPAGM--RVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDM 69
Query: 88 IDLVLTEVELPSISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIK 146
DLV+++V +P + GF LL V +E D +P IM+S++D I V+K ++ GA ++L+K
Sbjct: 70 FDLVISDVSMPDMDGFKLLEQVGLEMD----LPFIMLSVNDDIEKVMKSVIHGACNYLVK 125
Query: 147 PVRRNELRNLWQHVWRR 163
P+R EL+++WQHV R+
Sbjct: 126 PIRMEELKSIWQHVVRK 142
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 21/142 (14%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYR----------------VAAVPDGLAAWETLKCRP 85
+RVL V+ D + ++ LLR+C Y+ V + A + L+
Sbjct: 24 MRVLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLLLYMNFVTTTNQAITALKMLRENK 83
Query: 86 HSIDLVLTEVELPSISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFL 144
++ DLV+++V +P + GF LL LV +E D +PVIM+S H +V++ + GA D+L
Sbjct: 84 NNFDLVISDVSMPDMDGFKLLELVGLEMD----LPVIMLSSHSDQKLVMRGITHGACDYL 139
Query: 145 IKPVRRNELRNLWQHVWRRHSL 166
+KPVR EL+N+WQHV RR +
Sbjct: 140 LKPVRIEELKNIWQHVIRRKKI 161
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 5/134 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D S +I+ +L + Y+V A L+ R DLVL++V +P ++
Sbjct: 11 LRVLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNILRERKGCFDLVLSDVHMPGMN 70
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ LL V +E D +PVIMMS+ + V+K + GA D+LIKP+R EL+N+WQHV
Sbjct: 71 GYKLLQQVGLEMD----LPVIMMSVDGRTTTVMKGINHGACDYLIKPIRPEELKNIWQHV 126
Query: 161 WRRHSLLGGHVPQN 174
RR + + +N
Sbjct: 127 VRRKWTMNKELQRN 140
>gi|223942343|gb|ACN25255.1| unknown [Zea mays]
gi|323388571|gb|ADX60090.1| ARR-B family member [Zea mays]
gi|323388695|gb|ADX60152.1| ARR-B transcription factor [Zea mays]
gi|413956503|gb|AFW89152.1| putative two-component response regulator family protein isoform 1
[Zea mays]
gi|413956504|gb|AFW89153.1| putative two-component response regulator family protein isoform 2
[Zea mays]
Length = 686
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++VL+V+ D + ++ +L +C Y V P A L+ D+++++V +P +
Sbjct: 15 MKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS +V+ + GA D+LIKPVR EL+N+WQHV
Sbjct: 75 GFRLLELVGLEMD----LPVIMMSADSRTDIVMNGIKHGACDYLIKPVRMEELKNIWQHV 130
Query: 161 WRR 163
R+
Sbjct: 131 IRK 133
>gi|325179822|emb|CCA14225.1| protein kinase putative [Albugo laibachii Nc14]
Length = 935
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+L+VE D TR +L+ C Y V+AV +G A +TL+ DLVL +V LP ++
Sbjct: 6 VRILVVEDDAFTRIATIDILQSCKYNVSAVENGKEALQTLQQSYQQYDLVLCDVMLPCMT 65
Query: 102 GFALLTLVMEHDVCKN-IPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G LL + H N IP++M S ++ + +V C+ KGA D+LIKP++ N + L +HV
Sbjct: 66 GIELLEAIQAHPTRFNHIPIVMTSCNEGMDVVKNCLSKGAKDYLIKPIQVNTAKTLVRHV 125
Query: 161 W---RRHSLLGG-------HVP------QNLHDVYHKGGAISENNMASSHSSDYAASSQK 204
W ++HS VP QNLH + G N M + D A + K
Sbjct: 126 WLHRQQHSNQQNAQADSSERVPCYSSIWQNLHIIRQIGKGTHGNIMLAKRKEDGAIVAIK 185
Query: 205 NKGSEKVSDAQSSRTSSPYLEAESAYMQNM 234
+ S+ + + + +S Y N+
Sbjct: 186 RIQTADFSEQGKKQADNEVVLLKSLYHVNI 215
>gi|343407542|gb|AEM23772.1| RRB2 type-b response regulator [Nicotiana tabacum]
Length = 669
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L C Y V +A L+ + D+V+++V +P +
Sbjct: 33 LRVLVVDDDPTCLRILEKMLWNCHYEVTKSNRAESALSLLRENRNGFDIVISDVHMPDMD 92
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS +V+K + GA D+LIKPVR L+N+WQHV
Sbjct: 93 GFKLLEHVGLEMD----LPVIMMSADDSKDVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 161 WRR 163
R+
Sbjct: 149 IRK 151
>gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays]
gi|15667625|dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++VL+V+ D + ++ +L +C Y V P A L+ D+++++V +P +
Sbjct: 15 MKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS +V+ + GA D+LIKPVR EL+N+WQHV
Sbjct: 75 GFRLLELVGLEMD----LPVIMMSADSRTDIVMNGVKHGACDYLIKPVRMEELKNIWQHV 130
Query: 161 WRR 163
R+
Sbjct: 131 IRK 133
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L++C Y V A L+ R D+V+++V +P +
Sbjct: 10 LRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDVYMPDMD 69
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+WQHV
Sbjct: 70 GFKLLEHVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 125
Query: 161 WRR 163
+R+
Sbjct: 126 FRK 128
>gi|298103714|emb|CBM42558.1| putative B-type response regulator 12 [Populus x canadensis]
Length = 690
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+V+++V +P +
Sbjct: 34 LRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIALSLLRENKNGYDIVISDVHMPDMD 93
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D ++V+K + GA D+LIKP+R L+N+WQHV
Sbjct: 94 GFKLLEQIGLEMD----LPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQHV 149
Query: 161 WRR 163
R+
Sbjct: 150 VRK 152
>gi|224130444|ref|XP_002328610.1| type-b response regulator [Populus trichocarpa]
gi|222838592|gb|EEE76957.1| type-b response regulator [Populus trichocarpa]
Length = 671
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ + D+V+++V +P +
Sbjct: 34 LRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIALSLLRENKNGYDIVISDVHMPDMD 93
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS D ++V+K + GA D+LIKP+R L+N+WQHV
Sbjct: 94 GFKLLEQIGLEMD----LPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQHV 149
Query: 161 WRR 163
R+
Sbjct: 150 VRK 152
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R EL+ +WQHV
Sbjct: 71 GFKLLEHVGLELD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHV 126
Query: 161 WRR 163
R+
Sbjct: 127 LRK 129
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R EL+ +WQHV
Sbjct: 71 GFKLLEHVGLELD----LPVIMMSVDGETSRVMKGVHTGACDYLLKPIRMKELKIIWQHV 126
Query: 161 WRR 163
R+
Sbjct: 127 LRK 129
>gi|325180319|emb|CCA14722.1| protein kinase putative [Albugo laibachii Nc14]
Length = 977
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+VE D+ TR +LR C Y V AV +G A + L P DLVL +V LP ++G
Sbjct: 8 VLVVEDDEFTRMATIDILRSCRYEVFAVENGKEALDALMQEPTKYDLVLCDVMLPVMNGI 67
Query: 104 ALLTLVMEHD--------VCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
LL +ME + +IPV+M S ++ + +V C+ KGA D+LIKP++ N +
Sbjct: 68 QLLAAMMERNGFTSTHSLALHHIPVVMTSSNEEMDVVTNCLSKGAKDYLIKPIQVNTAKT 127
Query: 156 LWQHVW 161
L +HVW
Sbjct: 128 LVRHVW 133
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 6/124 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LR+LLV+ D S I+ +L + Y+V A L+ R S DLVL++V +P ++
Sbjct: 11 LRILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 102 GFALLTLV--MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
G+ LL V +E D +PVIMMS+ + V+ + GA D+LIKP+R EL+N+WQH
Sbjct: 71 GYKLLQQVGLLELD----LPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 160 VWRR 163
V RR
Sbjct: 127 VVRR 130
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 24/195 (12%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP--HSIDLVLTEVELPS 99
LRVL V+ D +I+ L+ C Y V D A + L+ R + DLV+++V +P+
Sbjct: 10 LRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQFDLVISDVVMPN 69
Query: 100 ISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+ GF LL L+ +E D +PVIM+S ++ ++K + GA D+++KPVR +LR +W
Sbjct: 70 MDGFKLLELIGLEMD----LPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLRGIWT 125
Query: 159 HVWR------RHSLLGGH------VPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNK 206
HV + R+++ G+ +P D G A + N+A++ Y S+KNK
Sbjct: 126 HVVKNGKTDPRNTISSGNDDDVQKLPSG--DELPSGDADKDENIAANRRKKY---SKKNK 180
Query: 207 GSEKVSDAQSSRTSS 221
+V+D + TS+
Sbjct: 181 RIVEVADEDNENTSA 195
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R EL+ +WQHV
Sbjct: 71 GFKLLEHVGLELD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHV 126
Query: 161 WRR 163
R+
Sbjct: 127 LRK 129
>gi|168004846|ref|XP_001755122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693715|gb|EDQ80066.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL+V+ + + I+ +L +C YRV A L+ D+V+++V++P +
Sbjct: 54 MRVLVVDDNPTCLMILEQMLVRCAYRVTTCGKATEALSMLREDIGKFDVVISDVDMPDMD 113
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + S V+K + GA D+L+KPVR ELRN+WQHV
Sbjct: 114 GFKLLELVGLEMD----LPVIMVSGNGETSAVMKGITHGACDYLLKPVRIEELRNIWQHV 169
Query: 161 WRR 163
R+
Sbjct: 170 VRK 172
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R EL+ +WQHV
Sbjct: 71 GFKLLEHVGLELD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHV 126
Query: 161 WRR 163
R+
Sbjct: 127 LRK 129
>gi|358345516|ref|XP_003636823.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|358348885|ref|XP_003638472.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355502758|gb|AES83961.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355504407|gb|AES85610.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|403502189|gb|AFR46617.1| response regulator 1 [Medicago truncatula]
Length = 228
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D ++ ++ LLR C Y V + + A L+ DLV+ EV +P +
Sbjct: 12 MRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLVIAEVHMPDMD 71
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G LL LV +E D +PVIM+S H +V+K + GA DFL+KPVR ELRN+WQHV
Sbjct: 72 GLKLLELVGLEMD----LPVIMLSAHGETELVMKAISHGARDFLLKPVRLEELRNIWQHV 127
Query: 161 WR 162
R
Sbjct: 128 IR 129
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ +LLV+ D ++ I+SA+LR C Y+V + D + A +TL+ R DLV+T++ +P ++
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
G L VM+ +PVIMMS + S++LK + +G A +++KP+ ++++++WQ+
Sbjct: 69 GLQLQKKVMQE---FKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
>gi|294464214|gb|ADE77622.1| unknown [Picea sitchensis]
Length = 214
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%)
Query: 656 ISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
I S+QR+AALTKFR KRK+RC++KKVRYQSRK LAEQRPRV+GQFVRQ +ET +
Sbjct: 153 IDINRSAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQTTHETANGE 212
Query: 716 AD 717
D
Sbjct: 213 GD 214
>gi|326488979|dbj|BAJ98101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 99/180 (55%), Gaps = 17/180 (9%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++VL+V+ D + ++ +L +C Y A L+ + D+++++V +P +
Sbjct: 17 MKVLVVDDDQTCLAVLKRMLIQCRYDATTCSQATRALAMLRENRGAFDVIISDVHMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS +V+K + GA D+LIKPVR EL+N+WQHV
Sbjct: 77 GFRLLELVGLEMD----LPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKNIWQHV 132
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAI--SENNMASSHSSDYAASSQKNKGSEKVSDAQSSR 218
R+ GG + + G++ ++ N +++ ++YA+S+ N G+E +Q +
Sbjct: 133 VRKK--FGG------NKEHEHSGSLDDTDRNRPTNNDNEYASSA--NDGAEDSWKSQKKK 182
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LR+L+V+ D S I+ +L + Y+V A L+ R S DLVL++V +P ++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 102 GFALLTLV--MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
G+ LL V +E D +PVIMMS+ + V+ + GA D+LIKP+R EL+N+WQH
Sbjct: 71 GYNLLQQVGLLEMD----LPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 160 VWRRHSLL 167
V RR ++
Sbjct: 127 VVRRKCVM 134
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LR+L+V+ D S I+ +L + Y+V A L+ R S DLVL++V +P ++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 102 GFALLTLV--MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
G+ LL V +E D +PVIMMS+ + V+ + GA D+LIKP+R EL+N+WQH
Sbjct: 71 GYNLLQQVGLLEMD----LPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 160 VWRRHSLL 167
V RR ++
Sbjct: 127 VVRRKCVM 134
>gi|109631196|gb|ABG35774.1| SRR384 [Striga asiatica]
Length = 569
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+ C Y V A + L+ + + D+V+++V +P +
Sbjct: 31 LRVLVVDDDPTCLRILEKMLKNCLYEVTTCNRAGIALKFLRDKRNVYDIVISDVHMPDMD 90
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PV MMS DS ++V+K + GA D+LIKP+R L+N+WQH+
Sbjct: 91 GFKLLEHVGLEMD----LPVTMMSADDSKNVVMKGVTHGACDYLIKPIRMEALKNIWQHL 146
Query: 161 WRR 163
R+
Sbjct: 147 VRK 149
>gi|42569980|ref|NP_182190.2| CCT motif family protein [Arabidopsis thaliana]
gi|225898603|dbj|BAH30432.1| hypothetical protein [Arabidopsis thaliana]
gi|330255644|gb|AEC10738.1| CCT motif family protein [Arabidopsis thaliana]
Length = 183
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V
Sbjct: 130 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTV 175
>gi|357113330|ref|XP_003558456.1| PREDICTED: uncharacterized protein LOC100821963 [Brachypodium
distachyon]
Length = 677
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++VL+V+ D + ++ +L +C Y A L+ D+++++V +P +
Sbjct: 16 MKVLVVDDDPTCLAVLKQMLVQCRYDATTCSQSTRALSMLRENRRGFDVIISDVHMPDMD 75
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS +V+K + GA D+LIKPVR EL+N+WQHV
Sbjct: 76 GFRLLELVGLEMD----LPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 131
Query: 161 WRR 163
R+
Sbjct: 132 VRK 134
>gi|51968564|dbj|BAD42974.1| hypothetical protein [Arabidopsis thaliana]
gi|62320037|dbj|BAD94182.1| hypothetical protein [Arabidopsis thaliana]
Length = 258
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V
Sbjct: 205 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTV 250
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
E + P V R+L+V+ DD R+++ LL+K Y V V +G AW+ + DLVLT
Sbjct: 102 EEYSPSKV-RILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAWDNISSGQQKYDLVLT 160
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMS--------LHDSISMVLKCMLKGAADFLI 145
+V +P I+GF LL + +H + KNIPVI+MS +D+I + G DFL
Sbjct: 161 DVMMPHITGFDLLQRINDHPIYKNIPVILMSGTAVDYKYANDTIKI-------GGQDFLT 213
Query: 146 KPVRRNELR----NLWQHVWRR 163
KP+ + L+ + Q +W+R
Sbjct: 214 KPIAKELLKKKIDTVLQSIWQR 235
>gi|20466420|gb|AAM20527.1| unknown protein [Arabidopsis thaliana]
gi|22136356|gb|AAM91256.1| unknown protein [Arabidopsis thaliana]
Length = 311
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V
Sbjct: 258 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTV 303
>gi|302852985|ref|XP_002958010.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
gi|300256682|gb|EFJ40943.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
Length = 254
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 8/126 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS-- 99
LR+L+V+ D +++ +LRKC Y V + A L+ + DLVL++ L S
Sbjct: 28 LRLLVVDDDPLCLKVVEQMLRKCSYDVTTCTNATMALNLLRDKSTEYDLVLSDSFLVSSS 87
Query: 100 -ISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLW 157
+ GF LL +V +E D +PVIMMS + S VL+ + GA D+LIKPVR ELRNLW
Sbjct: 88 DMDGFKLLEVVGLEMD----LPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLW 143
Query: 158 QHVWRR 163
QHV RR
Sbjct: 144 QHVVRR 149
>gi|42571259|ref|NP_973703.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|330255659|gb|AEC10753.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 351
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V
Sbjct: 298 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTV 343
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 123 MSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSL 166
MS DSI MVLKCML+GAAD+LIKP+R+NEL+NLWQHVWRR +L
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTL 44
>gi|115451653|ref|NP_001049427.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|24308616|gb|AAN52739.1| Putative response regulator 10 [Oryza sativa Japonica Group]
gi|108706930|gb|ABF94725.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706931|gb|ABF94726.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706932|gb|ABF94727.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|110331747|dbj|BAE97711.1| B-type response regulator [Oryza sativa Japonica Group]
gi|113547898|dbj|BAF11341.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|118790738|tpd|FAA00254.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|125585452|gb|EAZ26116.1| hypothetical protein OsJ_09978 [Oryza sativa Japonica Group]
gi|215767224|dbj|BAG99452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767240|dbj|BAG99468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 691
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++VL+V+ D + ++ +L +C Y A L+ D+++++V +P +
Sbjct: 16 MKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMPDMD 75
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS +V+K + GA D+LIKPVR EL+N+WQHV
Sbjct: 76 GFRLLELVGLEMD----LPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 131
Query: 161 WRR 163
R+
Sbjct: 132 IRK 134
>gi|125542952|gb|EAY89091.1| hypothetical protein OsI_10579 [Oryza sativa Indica Group]
Length = 691
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++VL+V+ D + ++ +L +C Y A L+ D+++++V +P +
Sbjct: 16 MKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMPDMD 75
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS +V+K + GA D+LIKPVR EL+N+WQHV
Sbjct: 76 GFRLLELVGLEMD----LPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 131
Query: 161 WRR 163
R+
Sbjct: 132 IRK 134
>gi|51038103|gb|AAT93906.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631502|gb|EEE63634.1| hypothetical protein OsJ_18451 [Oryza sativa Japonica Group]
Length = 368
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAV---------------PDGLA-- 76
E F P + +RVLL++ + +II+ LL CGY+ V P A
Sbjct: 18 EEFSP-VGMRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITYVWRVDEVTPKTAARD 76
Query: 77 AWETLKCRPHSIDLVLTEVELPS-ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKC 135
A E L P S D+VLTEV P+ I GF LL ++PV++ S D VLKC
Sbjct: 77 AVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTD---MDLPVVVFSADDDKRTVLKC 133
Query: 136 MLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGG 169
+ GA D+L+KP+R EL+N+WQHV+RR GG
Sbjct: 134 VNSGACDYLVKPLRHEELKNIWQHVYRRKLRSGG 167
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L+VL+V+ D+ +I+ +LR+C Y V A L+ DLV+++V +P +
Sbjct: 15 LKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAMLRENRSYFDLVISDVYMPDMD 74
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS I V++ + GA D+L+KPVR ELRN+WQHV
Sbjct: 75 GFKLLEAIGLELD----LPVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEELRNIWQHV 130
Query: 161 WRR 163
R+
Sbjct: 131 VRK 133
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 19/134 (14%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+L+ + DD R+I++ LL+K Y V VP+G AWE + DLVLT+V +P I+
Sbjct: 160 VRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHIT 219
Query: 102 GFALLTLVMEHDVCKNIPVIMMS--------LHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF LL + +H V ++IPVI+MS +D+I + G DFL KP+ + L
Sbjct: 220 GFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKI-------GGQDFLTKPIAKELL 272
Query: 154 R----NLWQHVWRR 163
+ + Q +W+R
Sbjct: 273 KKKIDTVLQSIWQR 286
>gi|168062796|ref|XP_001783363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665113|gb|EDQ51808.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL+V+ D + ++ +L C YRV A L+ DLV+++V++P +
Sbjct: 12 MRVLVVDDDPTCLVLLERMLILCSYRVTTCGRATDALLLLREDIGKFDLVISDVDMPDMD 71
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIMMS + S V++ ++ GA D+LIKPV ELRN+WQHV
Sbjct: 72 GFKLLELVGLEMD----LPVIMMSGNGETSAVMEGVIHGACDYLIKPVGIKELRNVWQHV 127
Query: 161 WRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASS 202
R+ V ++ + GG + + +DY +S+
Sbjct: 128 VRKKRQEVKAV--SMKSIEEAGGCERQKRAGGADDADYTSSA 167
>gi|28193631|gb|AAO27295.1| timing of CAB expression 1-like protein [Brassica rapa subsp.
pekinensis]
Length = 104
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 21/95 (22%)
Query: 615 SSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLK 674
SS+ +S ID N SA +S G Q+L QR+AAL KFR+K
Sbjct: 21 SSTTEHSAID-NHCSANSSSVGRTQQSL--------------------QREAALNKFRMK 59
Query: 675 RKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
RKDRC+DKKVRY+SRK LAEQRPR+KGQFVRQV++
Sbjct: 60 RKDRCFDKKVRYESRKKLAEQRPRIKGQFVRQVQS 94
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGY-RVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+++L+V+ + + R ++ LL K GY V V G A E ++ R S +LVL ++ +P I
Sbjct: 12 IKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELIENR--SFNLVLCDLHMPDI 69
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G ++ V + + P++MMS + +++V KC+ +GA D+L+KP++ N ++NLWQ+V
Sbjct: 70 DGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQANAVKNLWQNV 129
Query: 161 WRR 163
WR+
Sbjct: 130 WRK 132
>gi|296082079|emb|CBI21084.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +++ LLR+C Y V + A + L+ + DLV+++V +P +
Sbjct: 18 MRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDVHMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S +D +V+K + GA D+L+KPVR +L+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQHV 133
Query: 161 WRR 163
RR
Sbjct: 134 IRR 136
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ +LLV+ D ++ I+SA+LR C Y+V + D + A +TL+ R DLV+T++ +P ++
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
G L VM+ +PVIMMS + S++LK + +G A +++KP+ ++++++WQ+
Sbjct: 69 GLQLQKKVMQE---FKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
>gi|225430376|ref|XP_002282928.1| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 693
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +++ LLR+C Y V + A + L+ + DLV+++V +P +
Sbjct: 18 MRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDVHMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S +D +V+K + GA D+L+KPVR +L+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQHV 133
Query: 161 WRR 163
RR
Sbjct: 134 IRR 136
>gi|388514235|gb|AFK45179.1| unknown [Medicago truncatula]
Length = 138
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Query: 590 EQLRHGSPAGNQSSNSGLCN-GLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNGCTLF 648
E R SP +QS +S CN G A+N +S Y + +G V Q T
Sbjct: 12 EDQRLISPTTDQSVSSSFCNNGNASNFNSIGYG--------SNCGSSGNVEQVATFRTAA 63
Query: 649 IHDGFN------GISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQ 702
+ +G N G S R + R+AAL KFRLKRK+RCY+KKVRY+SRK LAEQRPRVKGQ
Sbjct: 64 VSEGKNEELTNSGYSHR-AMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQ 122
Query: 703 FVRQ 706
FVRQ
Sbjct: 123 FVRQ 126
>gi|147863919|emb|CAN81109.1| hypothetical protein VITISV_010435 [Vitis vinifera]
Length = 693
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +++ LLR+C Y V + A + L+ + DLV+++V +P +
Sbjct: 18 MRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDVHMPDMD 77
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S +D +V+K + GA D+L+KPVR +L+N+WQHV
Sbjct: 78 GFKLLELVGLEMD----LPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQHV 133
Query: 161 WRR 163
RR
Sbjct: 134 IRR 136
>gi|414588534|tpg|DAA39105.1| TPA: hypothetical protein ZEAMMB73_940919 [Zea mays]
gi|414588535|tpg|DAA39106.1| TPA: hypothetical protein ZEAMMB73_940919 [Zea mays]
Length = 402
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 144/362 (39%), Gaps = 87/362 (24%)
Query: 391 LELSL-RKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKA------------CPTPTSN 437
LE +L ++ + + +Q E+ NHS +SAFS Y N + C
Sbjct: 68 LETNLGKQQYRNGYKNQEFREKDIFNHSNSSAFSRYGNRRIESSGEIQFLPSRCIVGQEQ 127
Query: 438 SAELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVA----- 492
KD + + +L N + T +S E + + + A A
Sbjct: 128 HVHGKDPVFQPNGVLLPPNDHNTGESTRQARITLDSSMEGADIICSSSAREDAGASSSSH 187
Query: 493 ----FAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPI 548
+ P GF+PVP I G + P ++ + LQP + +P
Sbjct: 188 RKDSMSHPSYGFVPVP------IPVGA--MMP--YHCGAILQPVY------------YPQ 225
Query: 549 SASVHSNPDVHDSEQVYGRTGEINH---------NSVDQTVCEQSK-------------G 586
+H N + ++ +G+ N+ + VD+ + K G
Sbjct: 226 GPLMHCNSSAINKATIHQTSGQSNYREDCGSGRPSQVDEHKQSEEKHQLHHSRQIHRESG 285
Query: 587 RPLEQLRHGSPAGNQSSNSG--LCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNG 644
+P++ +R NQS++ +C G + +G+G N N
Sbjct: 286 QPVDMVRAHMDHANQSASCSRDICKG-------------------SGCTGSGEADTNANT 326
Query: 645 CTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFV 704
+GI S R+AAL KFR+KRKDRC+DKKVRY SRK LAEQRPRVKGQFV
Sbjct: 327 TVALESGNESGIQNSDRSHREAALMKFRMKRKDRCFDKKVRYHSRKKLAEQRPRVKGQFV 386
Query: 705 RQ 706
Q
Sbjct: 387 SQ 388
>gi|348665892|gb|EGZ05720.1| hypothetical protein PHYSODRAFT_551172 [Phytophthora sojae]
Length = 897
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+VE D+ TR +L+ C Y V AV +G A + L DLVL +V LP ++G
Sbjct: 8 VLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDVLVANHAKFDLVLCDVMLPVMTGI 67
Query: 104 ALLTLVMEHD-VCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
LL + +H +IP++M S ++ + +V C+ KGA D+LIKP++ N + L +HVW
Sbjct: 68 ELLDQIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLVRHVW 126
>gi|226532884|ref|NP_001140611.1| uncharacterized protein LOC100272683 [Zea mays]
gi|194700176|gb|ACF84172.1| unknown [Zea mays]
Length = 379
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 144/362 (39%), Gaps = 87/362 (24%)
Query: 391 LELSL-RKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKA------------CPTPTSN 437
LE +L ++ + + +Q E+ NHS +SAFS Y N + C
Sbjct: 45 LETNLGKQQYRNGYKNQEFREKDIFNHSNSSAFSRYGNRRIESSGEIQFLPSRCIVGQEQ 104
Query: 438 SAELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVA----- 492
KD + + +L N + T +S E + + + A A
Sbjct: 105 HVHGKDPVFQPNGVLLPPNDHNTGESTRQARITLDSSMEGADIICSSSAREDAGASSSSH 164
Query: 493 ----FAGPHLGFIPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPI 548
+ P GF+PVP I G + P ++ + LQP + +P
Sbjct: 165 RKDSMSHPSYGFVPVP------IPVGA--MMP--YHCGAILQPVY------------YPQ 202
Query: 549 SASVHSNPDVHDSEQVYGRTGEINH---------NSVDQTVCEQSK-------------G 586
+H N + ++ +G+ N+ + VD+ + K G
Sbjct: 203 GPLMHCNSSAINKATIHQTSGQSNYREDCGSGRPSQVDEHKQSEEKHQLHHSRQIHRESG 262
Query: 587 RPLEQLRHGSPAGNQSSNSG--LCNGLANNSSSGTYSRIDRNSSSAKASGTGTVPQNLNG 644
+P++ +R NQS++ +C G + +G+G N N
Sbjct: 263 QPVDMVRAHMDHANQSASCSRDICKG-------------------SGCTGSGEADTNANT 303
Query: 645 CTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFV 704
+GI S R+AAL KFR+KRKDRC+DKKVRY SRK LAEQRPRVKGQFV
Sbjct: 304 TVALESGNESGIQNSDRSHREAALMKFRMKRKDRCFDKKVRYHSRKKLAEQRPRVKGQFV 363
Query: 705 RQ 706
Q
Sbjct: 364 SQ 365
>gi|159475341|ref|XP_001695777.1| hypothetical protein CHLREDRAFT_174408 [Chlamydomonas reinhardtii]
gi|158275337|gb|EDP01114.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2212
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH--SIDLVLTEVELPS 99
LR+L+V++ +RQ + LLR+C Y+V AV + L H + DLVL E E PS
Sbjct: 1503 LRILVVDSKAVSRQTTTQLLRECAYQVTAVKTAREGLQKLIEAEHGANFDLVLKEHEPPS 1562
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+ LL + + + PV++ S D V+ C+ GA D+LIKP+R+NELR++W
Sbjct: 1563 ANACRLLKRMAKTEGLTRTPVVVTSSQDERETVMSCLSLGAIDYLIKPLRQNELRHIWTR 1622
Query: 160 VW 161
VW
Sbjct: 1623 VW 1624
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPR 698
+R AL K+R KRK+ + K +RY+SRK LA+QRPR
Sbjct: 1992 RRALALDKYRKKRKNLRFSKTIRYESRKQLAQQRPR 2027
>gi|302798186|ref|XP_002980853.1| type B response regulator [Selaginella moellendorffii]
gi|300151392|gb|EFJ18038.1| type B response regulator [Selaginella moellendorffii]
Length = 470
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL+V+ D ++ +L +C Y V A + A + L+ + DLV+++V +P +
Sbjct: 15 MRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYMPDMD 74
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIMMS + S+V++ + GA D+L+KPVR ELRN+WQHV
Sbjct: 75 GFKLLELIGLEMD----LPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHV 130
Query: 161 WRRH 164
R+
Sbjct: 131 VRKR 134
>gi|224143763|ref|XP_002325066.1| type-b response regulator [Populus trichocarpa]
gi|222866500|gb|EEF03631.1| type-b response regulator [Populus trichocarpa]
Length = 517
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL ++A+ + + A+L+KC YRV + A + L+ + +V+T+V+ +
Sbjct: 27 LRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAAEALKMLRENKNDYHVVITDVKRLDMD 86
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL ++ +E D +PVI++S DS S ++K + GA D+L+KPVR E++N+WQHV
Sbjct: 87 GFKLLEIIGLEMD----LPVILVSAEDSQSSIMKGIRHGARDYLLKPVRIQEMQNIWQHV 142
Query: 161 WRR 163
R+
Sbjct: 143 VRK 145
>gi|302815333|ref|XP_002989348.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
gi|300142926|gb|EFJ09622.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
Length = 470
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL+V+ D ++ +L +C Y V A + A + L+ + DLV+++V +P +
Sbjct: 15 MRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYMPDMD 74
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL L+ +E D +PVIMMS + S+V++ + GA D+L+KPVR ELRN+WQHV
Sbjct: 75 GFKLLELIGLEMD----LPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHV 130
Query: 161 WRRH 164
R+
Sbjct: 131 VRKR 134
>gi|413951616|gb|AFW84265.1| putative two-component response regulator family protein [Zea mays]
Length = 598
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 33/151 (21%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYR-------VAAVPDGLA-----------AWETLKC 83
LRVL+V+ D + +I+ +LRKC Y V A G++ A + L+
Sbjct: 13 LRVLVVDDDPTWLKILEKMLRKCSYEDAMSDRTVIARTGGISSCVTTCGLASVALQILRE 72
Query: 84 RPHSIDLVLTEVELPSISGFALLTLV-MEHDVCKNIPVI----------MMSLHDSISMV 132
R + D+V+++V +P + GF LL L+ +E D +PVI +MS+ S V
Sbjct: 73 RRNKFDIVISDVNMPDMDGFKLLELIGLEMD----LPVISTKLLQSVSTVMSIDGETSRV 128
Query: 133 LKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+K + GA D+L+KPVR ELRN+WQHV+R+
Sbjct: 129 MKGVHHGACDYLLKPVRMKELRNIWQHVYRK 159
>gi|224089346|ref|XP_002308698.1| type-b response regulator [Populus trichocarpa]
gi|222854674|gb|EEE92221.1| type-b response regulator [Populus trichocarpa]
Length = 588
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLR+C Y V + A L+ + DLV+++V +P +
Sbjct: 19 MRVLAVDDDPTCLLLLETLLRRCQYTVTTTSQAITALSMLRENKNKFDLVISDVHMPDMD 78
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 79 GFKLLELVGLEMD----LPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 134
Query: 161 WRR 163
RR
Sbjct: 135 IRR 137
>gi|301118478|ref|XP_002906967.1| protein kinase, putative [Phytophthora infestans T30-4]
gi|262108316|gb|EEY66368.1| protein kinase, putative [Phytophthora infestans T30-4]
Length = 897
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+VE D+ TR +L+ C Y V AV +G A + L DLVL +V LP ++G
Sbjct: 8 VLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDLLVTNHAKFDLVLCDVMLPVMTGI 67
Query: 104 ALLTLVMEHD-VCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
LL + +H +IP++M S ++ + +V C+ KGA D+LIKP++ N + L +HVW
Sbjct: 68 ELLDEIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLVRHVW 126
>gi|297796727|ref|XP_002866248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312083|gb|EFH42507.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ + + + + LL +C Y V + A E L+ + DLV+++VE+P
Sbjct: 18 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALELLRENSNMFDLVISDVEMPDTD 77
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL + +E D +PVIM+S H V+K ++ GA D+L+KPV EL+N+W HV
Sbjct: 78 GFKLLEIGLEMD----LPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 133
Query: 162 RRH 164
+++
Sbjct: 134 KKN 136
>gi|50400641|sp|Q9FGT7.2|ARR18_ARATH RecName: Full=Two-component response regulator ARR18
Length = 635
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ + + + + LL +C Y V + A E L+ + DLV+++VE+P
Sbjct: 18 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 77
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL + +E D +PVIM+S H V+K ++ GA D+L+KPV EL+N+W HV
Sbjct: 78 GFKLLEIGLEMD----LPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 133
Query: 162 RRH 164
+++
Sbjct: 134 KKN 136
>gi|145359387|ref|NP_200616.3| response regulator 18 [Arabidopsis thaliana]
gi|332009612|gb|AED96995.1| response regulator 18 [Arabidopsis thaliana]
Length = 618
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ + + + + LL +C Y V + A E L+ + DLV+++VE+P
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL + +E D +PVIM+S H V+K ++ GA D+L+KPV EL+N+W HV
Sbjct: 61 GFKLLEIGLEMD----LPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 116
Query: 162 RRH 164
+++
Sbjct: 117 KKN 119
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 7/124 (5%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP--HSIDLVLTEVELPS 99
LRVL V+ D +I+ L+ C Y V D A + L+ R + DLV+++V +P+
Sbjct: 10 LRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDLVISDVIMPN 69
Query: 100 ISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+ GF LL L+ +E D +PVIM+S + ++K + GA D+++KPVR +LR +W
Sbjct: 70 MDGFKLLELIGLEMD----LPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGIWT 125
Query: 159 HVWR 162
HV +
Sbjct: 126 HVVK 129
>gi|255564288|ref|XP_002523141.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223537703|gb|EEF39326.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 473
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y+V A L+ + D+V+ ++ +P +
Sbjct: 35 LRVLVVDDDRTCLLILEKMLRNCLYKVTKCRKAKDALSMLREDKNKFDIVVIDLHMPDMD 94
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL + + +PV+MMS D ++ K +L GA D+LIKPVR L+ +WQHV
Sbjct: 95 GFELLEIA---EFEMGLPVVMMSSDDDHEVIKKGVLHGACDYLIKPVRMEALKMIWQHVI 151
Query: 162 RR 163
R+
Sbjct: 152 RK 153
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 140/325 (43%), Gaps = 49/325 (15%)
Query: 409 DERHTLNHSAASAFSWYNN-----SKACPTPTS----NSAELKDGSSKSDEIL------- 452
+E+ NHS +SAFS Y N S P P S + + D + +S +L
Sbjct: 384 NEKDIFNHSNSSAFSRYGNKRIESSAQRPFPPSFRVVHQQPVYDKNPQSSRVLLSCEHNT 443
Query: 453 ------SNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGV 506
+ + +T G C SS+ RE+ + S + P GFIPVP
Sbjct: 444 RESTVQAQVPLDRSTEGAAILC--SSSVREDAGT---SSSSPRKDSLTHPSYGFIPVPIP 498
Query: 507 RFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSN----PDVHDSE 562
I Y I ++Y + S + H ++ H N P + + +
Sbjct: 499 VGAAIPYHYGAIMQPMYYPQGAFMHCDSAAINKTAIQH-VSCQSNYHENLGKPPQIDEHK 557
Query: 563 QVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYS- 621
Q E NH + G P++ + NQS++ C+ S T S
Sbjct: 558 Q-----PEENHQLHHSRQILRESGEPVDLAKAHMERINQSAS---CSQDIRKGSGCTGSG 609
Query: 622 RIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYD 681
D N+++ A +G + C+ + DG S+R+AAL KFR+KRKDRC++
Sbjct: 610 ETDANTNTVIALESGN-ESGVQNCSNNVLDG-------DRSRREAALLKFRMKRKDRCFE 661
Query: 682 KKVRYQSRKSLAEQRPRVKGQFVRQ 706
KKVRY SRK LAEQRPRVKGQFV Q
Sbjct: 662 KKVRYHSRKKLAEQRPRVKGQFVSQ 686
>gi|224130168|ref|XP_002320769.1| pseudo response regulator [Populus trichocarpa]
gi|222861542|gb|EEE99084.1| pseudo response regulator [Populus trichocarpa]
Length = 504
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 18 LETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAA 77
+ +E+ S EV SF + +R+L+VE+D + +I+S +L+ GY V A
Sbjct: 1 MTSERVLSVEVTENNAGSF--PIGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDA 58
Query: 78 WETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCML 137
L+ + I+L+L E LP ++ + +L + E ++P+++ S ++ S +L C+
Sbjct: 59 LRILREKEDEINLILIETRLPDMNQYEILETLGE---LSSLPIVVFSADNNESAMLGCLY 115
Query: 138 KGAADFLIKPVRRNELRNLWQHVWR 162
KGAA +L+KP+ +N+++NLWQ +R
Sbjct: 116 KGAALYLMKPIIKNDVKNLWQLTYR 140
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ VLLV DD+ LLR+C Y+V G A L+ R +L+LT+V +P +
Sbjct: 10 VHVLLV--DDA------GLLRRCQYQVTTASSGREAMALLE-RGTQFNLLLTDVMMPDVD 60
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL V + + +PV+MMS ++ MV+ C+ GA D++IKPV ++++W HVW
Sbjct: 61 GPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTNKAVKHMWAHVW 120
Query: 162 RR 163
RR
Sbjct: 121 RR 122
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 140/325 (43%), Gaps = 49/325 (15%)
Query: 409 DERHTLNHSAASAFSWYNN-----SKACPTPTS----NSAELKDGSSKSDEIL------- 452
+E+ NHS +SAFS Y N S P P S + + D + +S +L
Sbjct: 305 NEKDIFNHSNSSAFSRYGNKRIESSAQRPFPPSFRVVHQQPVYDKNPQSSRVLLSCEHNT 364
Query: 453 ------SNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGV 506
+ + +T G C SS+ RE+ + S + P GFIPVP
Sbjct: 365 RESTVQAQVPLDRSTEGAAILC--SSSVREDAGT---SSSSPRKDSLTHPSYGFIPVPIP 419
Query: 507 RFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSN----PDVHDSE 562
I Y I ++Y + S + H ++ H N P + + +
Sbjct: 420 VGAAIPYHYGAIMQPMYYPQGAFMHCDSAAINKTAIQH-VSCQSNYHENLGKPPQIDEHK 478
Query: 563 QVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYS- 621
Q E NH + G P++ + NQS++ C+ S T S
Sbjct: 479 Q-----PEENHQLHHSRQILRESGEPVDLAKAHMERINQSAS---CSQDIRKGSGCTGSG 530
Query: 622 RIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYD 681
D N+++ A +G + C+ + DG S+R+AAL KFR+KRKDRC++
Sbjct: 531 ETDANTNTVIALESGN-ESGVQNCSNNVLDG-------DRSRREAALLKFRMKRKDRCFE 582
Query: 682 KKVRYQSRKSLAEQRPRVKGQFVRQ 706
KKVRY SRK LAEQRPRVKGQFV Q
Sbjct: 583 KKVRYHSRKKLAEQRPRVKGQFVSQ 607
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 140/325 (43%), Gaps = 49/325 (15%)
Query: 409 DERHTLNHSAASAFSWYNN-----SKACPTPTS----NSAELKDGSSKSDEIL------- 452
+E+ NHS +SAFS Y N S P P S + + D + +S +L
Sbjct: 308 NEKDIFNHSNSSAFSRYGNKRIESSAQRPFPPSFRVVHQQPVYDKNPQSSRVLLSCEHNT 367
Query: 453 ------SNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPGV 506
+ + +T G C SS+ RE+ + S + P GFIPVP
Sbjct: 368 RESTVQAQVPLDRSTEGAAILC--SSSVREDAGT---SSSSPRKDSLTHPSYGFIPVPIP 422
Query: 507 RFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSN----PDVHDSE 562
I Y I ++Y + S + H ++ H N P + + +
Sbjct: 423 VGAAIPYHYGAIMQPMYYPQGAFMHCDSAAINKTAIQH-VSCQSNYHENLGKPPQIDEHK 481
Query: 563 QVYGRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYS- 621
Q E NH + G P++ + NQS++ C+ S T S
Sbjct: 482 Q-----PEENHQLHHSRQILRESGEPVDLAKAHMERINQSAS---CSQDIRKGSGCTGSG 533
Query: 622 RIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYD 681
D N+++ A +G + C+ + DG S+R+AAL KFR+KRKDRC++
Sbjct: 534 ETDANTNTVIALESGN-ESGVQNCSNNVLDG-------DRSRREAALLKFRMKRKDRCFE 585
Query: 682 KKVRYQSRKSLAEQRPRVKGQFVRQ 706
KKVRY SRK LAEQRPRVKGQFV Q
Sbjct: 586 KKVRYHSRKKLAEQRPRVKGQFVSQ 610
>gi|224136878|ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
gi|222869434|gb|EEF06565.1| type-b response regulator [Populus trichocarpa]
Length = 716
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 77/128 (60%), Gaps = 11/128 (8%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYR--------VAAVPDGLAAWETLKCRPHSIDLV 91
+ +++L+V+ D ++ I+SA+L+ C Y+ V V + A TL+ + DLV
Sbjct: 16 LKIKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKNPFDALSTLRLKKGLFDLV 75
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
+T++ +P ++G L V E +PVI+MS DS ++L+ + GAA +++KP+ ++
Sbjct: 76 VTDLHMPEMNGMELQQQVDEE---FKLPVIIMSSDDSEKVILRTLEGGAAFYIVKPINKD 132
Query: 152 ELRNLWQH 159
+L+N+WQ+
Sbjct: 133 DLKNVWQY 140
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M + VL+ E D+ R + +L C Y+V AV +G A + L + +ID+VL ++ +P
Sbjct: 1 MNIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKQDSNIDIVLLDLYMPE 60
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+ GF LL+L+ EH+ + IPVIMMS V C+ KGA D++ KP+R ++ + ++
Sbjct: 61 MDGFELLSLMQEHENLQKIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRVQNVKAIAKY 120
Query: 160 V 160
V
Sbjct: 121 V 121
>gi|297743941|emb|CBI36911.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + QI+ +L +C Y+V + A L+ D+VL+++ +P IS
Sbjct: 24 IRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLHMPDIS 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G LL ++ +E D +PV+MMS + ++K ++ GA D+ +KPVR + ++ +WQHV
Sbjct: 84 GLKLLEIIGLEMD----MPVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQHV 139
Query: 161 WRR 163
R+
Sbjct: 140 IRK 142
>gi|146161471|ref|XP_001007239.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146146737|gb|EAR86994.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 847
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 69/119 (57%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ VL+ E D+ R + +L C Y+V AV +G A + L +ID+VL ++ +P +
Sbjct: 9 IHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKADSNIDIVLLDLYMPEMD 68
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G LL L+ EH+ K IPVIMMS + V C+ GA D+L+KP+R ++ L ++V
Sbjct: 69 GIELLLLMQEHEHLKRIPVIMMSFDNEQERVAYCIANGAKDYLVKPLRIQNVKGLAKYV 127
>gi|224063953|ref|XP_002301318.1| predicted protein [Populus trichocarpa]
gi|222843044|gb|EEE80591.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 18 LETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAA 77
+ +E+ S EV + SF +R+L+VE+D + +I+S +L+ GY V A
Sbjct: 1 MTSEQFLSVEVTKNNASSFAEG--VRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDA 58
Query: 78 WETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCML 137
L+ + I+L+L E LP + + ++ V + ++P+++ S +++S +L +
Sbjct: 59 LHILREKEDEINLILIETHLPDMDQYEIIETV--RAMSSSLPIVVFSADNNVSAMLGWLY 116
Query: 138 KGAADFLIKPVRRNELRNLWQHVWRR 163
KGAA +L+KP+ +N+++NLWQ +R+
Sbjct: 117 KGAALYLMKPIVKNDVKNLWQLTYRK 142
>gi|225437477|ref|XP_002269371.1| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 519
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + QI+ +L +C Y+V + A L+ D+VL+++ +P IS
Sbjct: 24 IRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLHMPDIS 83
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G LL ++ +E D +PV+MMS + ++K ++ GA D+ +KPVR + ++ +WQHV
Sbjct: 84 GLKLLEIIGLEMD----MPVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQHV 139
Query: 161 WRR 163
R+
Sbjct: 140 IRK 142
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 48/56 (85%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
+QR+AAL KFR KRK+RC++KKVRYQSRK LAEQRPR++GQFVR+V ++ +AD
Sbjct: 713 AQREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRIRGQFVRRVFHDINSEDAD 768
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 49/62 (79%)
Query: 656 ISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 715
+ +QR+AAL KFR KRK+RC++KKVRYQSRK LAEQRPR++GQFVR+V ++ +
Sbjct: 685 VDQNQYAQREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRIRGQFVRRVFHDINSED 744
Query: 716 AD 717
AD
Sbjct: 745 AD 746
>gi|226499956|ref|NP_001141563.1| uncharacterized protein LOC100273679 [Zea mays]
gi|194705078|gb|ACF86623.1| unknown [Zea mays]
gi|413937888|gb|AFW72439.1| two-component response regulator ARR3 [Zea mays]
Length = 206
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R II+A+LR +RV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 89 VLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEPN-VSMIITDYCMPEMTGY 147
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ ++ V R
Sbjct: 148 ELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDVSRVFSRVLR 206
>gi|356528234|ref|XP_003532710.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR11-like [Glycine max]
Length = 581
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 13/126 (10%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC---RPHSIDLVLTEVELP 98
LRVL+V D IIS L A+V A E LK R + D+V+++V +P
Sbjct: 19 LRVLVV---DDXANIIS--LSNSFLLYASVTTCCLATEALKKLRERKEAYDIVISDVNMP 73
Query: 99 SISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLW 157
+ GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R ELRN+W
Sbjct: 74 DMDGFKLLEQVGLEMD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 129
Query: 158 QHVWRR 163
QHV+R+
Sbjct: 130 QHVFRK 135
>gi|297733625|emb|CBI14872.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 60 LLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEH-DVCKNI 118
+L+KC Y + A L+ R +S D+++++V +P + GF LL EH +V ++
Sbjct: 1 MLKKCSYEMTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLL----EHLEVEMDL 56
Query: 119 PVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
PVI++S+ ++ V+K + GA D+L+KPVR EL+N+WQHV R+
Sbjct: 57 PVILISVDGEMNRVMKGVQSGACDYLLKPVRMEELKNIWQHVLRK 101
>gi|413956107|gb|AFW88756.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 603
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDA 714
QR+AAL KFRLKRKDR + KKVRYQSRK LAEQRPRV+GQFVRQ + E + A
Sbjct: 547 QREAALNKFRLKRKDRNFGKKVRYQSRKRLAEQRPRVRGQFVRQSEQEDQTA 598
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 123 MSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR-HSLLG 168
MS +DS+SMV KC+ KGA DFL+KP+R+NEL+NLWQHVWRR HS G
Sbjct: 1 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRRCHSSSG 47
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
S+QR+AAL KFRLKRK+RC++KKVRY SRK LAEQRPRVKGQF+R ++ K + D
Sbjct: 441 SAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPRVKGQFIRNPLHDYKSGSDD 497
>gi|297746177|emb|CBI16233.3| unnamed protein product [Vitis vinifera]
Length = 103
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 652 GFNGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNET 711
G N + +QR+AALTKFR KRK+RC++KKVRYQSRK LAEQRPR++GQFVRQ ++
Sbjct: 21 GGNRVEEDRFAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQNVSDN 80
Query: 712 KDANADG 718
K A DG
Sbjct: 81 K-AGKDG 86
>gi|255541448|ref|XP_002511788.1| sensor histidine kinase, putative [Ricinus communis]
gi|223548968|gb|EEF50457.1| sensor histidine kinase, putative [Ricinus communis]
Length = 437
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ D + I+S +L GY+V A L+ R + +DL+LTEV LP + +
Sbjct: 21 ILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPDMDKY 80
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
LL + E +P++++S D + +L C+ KGA +L+KP+ N++++LWQ
Sbjct: 81 ELLETMAE---VSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQ 132
>gi|224141943|ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
gi|222865754|gb|EEF02885.1| type-b response regulator [Populus trichocarpa]
Length = 661
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLR+C Y V + A L+ + DLV+++V +P +
Sbjct: 19 MRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDLVISDVHMPDMD 78
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + +V+K + GA +L+KPVR EL+ +WQHV
Sbjct: 79 GFKLLELVGLEMD----LPVIMLSANGDPKLVMKGITHGACYYLLKPVRIEELKTIWQHV 134
Query: 161 WRR 163
RR
Sbjct: 135 IRR 137
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L +++V+ D I++ +L+ Y V V A TL+ R + L++T+V +P +
Sbjct: 21 LHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTLRTRSNFFHLIVTDVHMPEMD 80
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
GF LV E ++PV+MMS D S +L+ + GAA +++KPV ++L+NLWQ+
Sbjct: 81 GFEFQRLVHEE---FHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQY 135
>gi|298103726|emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
Length = 668
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + ++ LLR+C Y V + A L+ + DLV+++V +P +
Sbjct: 19 MRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDLVISDVHMPDMD 78
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S + +V+K + GA +L+KPVR EL+ +WQHV
Sbjct: 79 GFKLLELVGLEMD----LPVIMLSANGDPKLVMKGITHGACYYLLKPVRIEELKTIWQHV 134
Query: 161 WRR 163
RR
Sbjct: 135 IRR 137
>gi|225457351|ref|XP_002284703.1| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 163
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLV 91
+ + + R LR+LL + + + + +++LL++C Y+V +V A L SID+V
Sbjct: 23 KIRALIDRSKLRILLCDTNAGSCKEVASLLKECSYQVISVGSTGEAIHVLSSEGPSIDIV 82
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
L E++LP + +L + E + IPVIM+ D ISM+ C+ GA D+L+ P+ N
Sbjct: 83 LAELDLPMANCLKMLKYITEDQELRCIPVIMLVTEDKISMIANCLRYGAVDYLLTPLGIN 142
Query: 152 ELRNLWQHV 160
EL NL H+
Sbjct: 143 ELLNLSIHM 151
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 7/124 (5%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP--HSIDLVLTEVELPS 99
LRVL V+ D +I+ L+ C Y V D A + L+ R + DLV+++V +
Sbjct: 10 LRVLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDMLRERKDGNQFDLVISDVVMTK 69
Query: 100 ISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+ GF LL L+ +E D +PVIM+S + ++K + GA D+++KPVR +LR +W
Sbjct: 70 MDGFKLLELIGLEMD----LPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGIWT 125
Query: 159 HVWR 162
HV +
Sbjct: 126 HVVK 129
>gi|242065846|ref|XP_002454212.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
gi|241934043|gb|EES07188.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
Length = 151
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R II+A+LR +RV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 34 VLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEPN-VSMIITDYWMPEMTGY 92
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ ++ V R
Sbjct: 93 ELLKKVKESSKLKQIPVVIMSSENVSTRISRCLEEGAEDFLVKPVRASDVSRVFSRVLR 151
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 31/265 (11%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LL E + R + +L C Y V V +G A L+ DLVL ++ +P + GF
Sbjct: 9 ILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETREFDLVLLDLYMPEMDGF 68
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LLTL+ E + +PV++MS ++ C+ GA D+L+KPVR E + L +H+
Sbjct: 69 ELLTLMQEDEKLSLLPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQECKGLVRHMSVT 128
Query: 164 -----HSLLGGHVPQNLHDVYHKGGAISENNMA-SSHSSDYAASSQKNKGSEKVSDAQSS 217
S G H + + Y GGA + ++ S H + A Q D Q+
Sbjct: 129 ASSADKSEKGLHKYEKIR--YVDGGATGQIDLVRSKHDGEQYALKQIKLQYLTEKDKQN- 185
Query: 218 RTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKTGGAS 277
+E E ++ +QG + +K + N +++ ++ E GG
Sbjct: 186 ------VENEILLLKALQGPTLIKFVESFNDK-------------DSKYIVMEYADGGNL 226
Query: 278 DELIVSEKLNRSGSEVAQCDDALRL 302
++I + N++ + CD+ LR
Sbjct: 227 AQMI---QKNQTNGQKFTCDEILRF 248
>gi|2244969|emb|CAB10390.1| hypothetical protein [Arabidopsis thaliana]
gi|3549643|emb|CAA06433.1| receiver-like protein 5 [Arabidopsis thaliana]
gi|7268360|emb|CAB78653.1| hypothetical protein [Arabidopsis thaliana]
Length = 644
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +L C YR + A + D+V+++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYR-----EQRAHCLCFGRTKNGFDIVISDVHMPDMD 82
Query: 102 GFALLTLV-MEHD-------VCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF LL V +E D V K + VI+MS DS S+VLK + GA D+LIKPVR L
Sbjct: 83 GFKLLEHVGLEMDLPVINLNVLKPL-VIVMSADDSKSVVLKGVTHGAVDYLIKPVRIEAL 141
Query: 154 RNLWQHVWRRHSLLGGHVPQNLHDVY-HKGGAISENNMASSHSSDYAASSQKNKGSEKVS 212
+N+WQHV R+ +N +V H GG+I + + + N S
Sbjct: 142 KNIWQHVVRKK--------RNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEG 193
Query: 213 DAQSSR 218
+ +SSR
Sbjct: 194 NGRSSR 199
>gi|226532303|ref|NP_001149732.1| two-component response regulator ARR3 [Zea mays]
gi|195629894|gb|ACG36588.1| two-component response regulator ARR3 [Zea mays]
gi|195650489|gb|ACG44712.1| two-component response regulator ARR3 [Zea mays]
gi|414884446|tpg|DAA60460.1| TPA: two-component response regulator ARR3 [Zea mays]
Length = 148
Score = 81.3 bits (199), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
++ DDS+ R I++ALLR+ YRV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 30 VIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEPN-VSMIITDYWMPEMTGY 88
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ +
Sbjct: 89 DLLKKVKESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRI 141
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
+ +++L+V+ D T I+S++L+ C +V V + L A +L+ + DLV+T++ +P
Sbjct: 19 LTVQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSLQSSDGAFDLVITDLHMPG 78
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
++G L + E IPV++MS S +L+ + GA +++KPV +L+N+WQ+
Sbjct: 79 MNGIQLQKQIDEE---FKIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDLKNVWQY 135
Query: 160 V 160
Sbjct: 136 A 136
>gi|383171336|gb|AFG68971.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
gi|383171338|gb|AFG68972.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
gi|383171342|gb|AFG68974.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
gi|383171344|gb|AFG68975.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
Length = 97
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 4 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 59
>gi|361068043|gb|AEW08333.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
Length = 97
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A+G
Sbjct: 4 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGANGV 59
>gi|31338862|dbj|BAC77081.1| B-type response regulator [Oryza glaberrima]
Length = 341
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+++ D S ++ LL KC Y+V + A + P +DLV+++ P+
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G +L V IP ++M+ + V+K + GA+DFL+KPVR EL N+WQH++
Sbjct: 71 GLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHIF 127
Query: 162 RRH 164
R+
Sbjct: 128 RKQ 130
>gi|149919982|ref|ZP_01908457.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
gi|149819255|gb|EDM78689.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
Length = 513
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH-SIDLVLTEVELPSIS 101
RVL+V+ + + R+++ ALL + GY V PDG +A +K P + D+V++++ +P++
Sbjct: 7 RVLVVDDEPNLRKVLGALLMQLGYEVLTEPDGASALARVKSAPRGTFDVVISDLRMPNMD 66
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G ALL + D ++PVI+++ H ++ ++ + KGA DFL KP R+++ +L
Sbjct: 67 GMALLEALTAED--SSLPVIILTAHGTVDTAVQAVKKGAFDFLEKPFERDQIDHLVSKAV 124
Query: 162 RRHSLLG 168
+ L G
Sbjct: 125 KTRRLAG 131
>gi|195641278|gb|ACG40107.1| two-component response regulator ARR3 [Zea mays]
Length = 136
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R II+A+LR +RV AV G A E L P ++ +++T+ +P ++G+
Sbjct: 19 VLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEP-NVSMIITDYCMPEMTGY 77
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ ++ V R
Sbjct: 78 ELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDVSRVFSRVLR 136
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L+VL+V+ + I+ +L+ C Y V A L+ + DLV+++V +P +
Sbjct: 4 LKVLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMPDMD 63
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL + +E D +PVIMMS V+K + GA D+L+KPVR EL N+WQHV
Sbjct: 64 GFKLLEAIGLELD----LPVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQHV 119
Query: 161 WRR 163
R+
Sbjct: 120 VRK 122
>gi|75327667|sp|Q7Y0W5.1|EHD1_ORYSJ RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338856|dbj|BAC77078.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+++ D S ++ LL KC Y+V + A + P +DLV+++ P+
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G +L V IP ++M+ + V+K + GA DFL+KPVR EL N+WQH++
Sbjct: 71 GLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 162 RRH 164
R+
Sbjct: 128 RKQ 130
>gi|383171334|gb|AFG68970.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
gi|383171340|gb|AFG68973.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
Length = 97
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
+R+AAL KFR KRKDRC+DKK+RY SRK LAEQRPR++GQFVRQ N+ + A A G
Sbjct: 4 RREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQT-NDMEAAGASGV 59
>gi|9759533|dbj|BAB10999.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ + + + + LL +C Y V + A E L+ + DLV+++VE+P
Sbjct: 18 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 77
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL + +E D +PVI S +DS V+K ++ GA D+L+KPV EL+N+W HV
Sbjct: 78 GFKLLEIGLEMD----LPVITHSDYDS---VMKGIIHGACDYLVKPVGLKELQNIWHHVV 130
Query: 162 RRH 164
+++
Sbjct: 131 KKN 133
>gi|238013640|gb|ACR37855.1| unknown [Zea mays]
Length = 205
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S +R AAL KFRLKRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 127 SERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQPTN 175
>gi|75327665|sp|Q7Y0W3.1|EHD1_ORYSI RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338860|dbj|BAC77080.1| B-type response regulator [Oryza sativa Indica Group]
Length = 341
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+++ D S ++ LL KC Y+V + A + P +DLV+++ P+
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G +L V IP ++M+ + V+K + GA DFL+KPVR EL N+WQH++
Sbjct: 71 GLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 162 RRH 164
R+
Sbjct: 128 RKQ 130
>gi|297821174|ref|XP_002878470.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
gi|297324308|gb|EFH54729.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
Length = 431
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 37 LPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
P +RVLLV+AD ++ + L+ + Y+V DG A L IDLV+ +
Sbjct: 36 FPTTSIRVLLVDADSNSLLPMKNLMIQYSYQVTKYEDGEEAMAFLMKNKQEIDLVIWDFH 95
Query: 97 LPSISGF-ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+P I+G AL T+ E D +PV++MS V++ + GA DFL+KPV + +
Sbjct: 96 MPDINGLDALNTIGKEMD----LPVVIMSHDHKKETVMESIKYGACDFLVKPVSKEVIAV 151
Query: 156 LWQHVWRR 163
LW+HV+R+
Sbjct: 152 LWRHVYRK 159
>gi|31338858|dbj|BAC77079.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+++ D S ++ LL KC Y+V + A + P +DLV+++ P+
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G +L V IP ++M+ + V+K + GA DFL+KPVR EL N+WQH++
Sbjct: 71 GLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 162 RRH 164
R+
Sbjct: 128 RKQ 130
>gi|413923084|gb|AFW63016.1| hypothetical protein ZEAMMB73_883721 [Zea mays]
gi|413923085|gb|AFW63017.1| hypothetical protein ZEAMMB73_883721 [Zea mays]
Length = 298
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S +R AAL KFRLKRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ N
Sbjct: 220 SERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQPTN 268
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+QR+AAL KFRLKRK+RC++KKVRY SRK LAEQRP VKGQF+R+
Sbjct: 440 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+QR+AAL KFRLKRK+RC++KKVRY SRK LAEQRP VKGQF+R+
Sbjct: 440 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+QR+AAL KFRLKRK+RC++KKVRY SRK LAEQRP VKGQF+R+
Sbjct: 440 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+QR+AAL KFRLKRK+RC++KKVRY SRK LAEQRP VKGQF+R+
Sbjct: 467 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 511
>gi|147805870|emb|CAN64871.1| hypothetical protein VITISV_039966 [Vitis vinifera]
Length = 570
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 20/138 (14%)
Query: 42 LRVLLVEADDSTRQIISALLRK----CGYRVAAVPDGLAAWETLKC-----------RPH 86
LRVL V+ D + +I+ + RK G P A T C R +
Sbjct: 14 LRVLAVDDDPAWLKILLIIFRKKLNFAGVICRMFPKLYLARVTTCCVARDALSMLQERKN 73
Query: 87 SIDLVLTEVELPSISGFALLTLVMEH-DVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
S D+++++V +P + GF LL EH +V ++PVI++S+ ++ V+K + GA D+L+
Sbjct: 74 SFDIIISDVNMPDMDGFQLL----EHLEVEMDLPVILISVDGEMNRVMKGIQSGACDYLL 129
Query: 146 KPVRRNELRNLWQHVWRR 163
KPVR EL+N+WQHV R+
Sbjct: 130 KPVRMEELKNIWQHVLRK 147
>gi|218196749|gb|EEC79176.1| hypothetical protein OsI_19863 [Oryza sativa Indica Group]
Length = 385
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 79 ETLKCRPHSIDLVLTEVELPS-ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCML 137
E L P S D+VLTEV P+ I GF LL ++PV++ S D VLKC+
Sbjct: 17 EELHENPWSYDMVLTEVHAPAGIDGFNLLQYA---GTDMDLPVVVFSADDDKRTVLKCVN 73
Query: 138 KGAADFLIKPVRRNELRNLWQHVWRRHSLLGG 169
GA D+L+KP+R EL+N+WQHV+RR GG
Sbjct: 74 SGACDYLVKPLRHEELKNIWQHVYRRKLRSGG 105
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 113 DVCKNI------PVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV--WRRH 164
++CKN+ +++ S + + MV++ ++ GA D+++KP+ ++ +W+HV WR
Sbjct: 130 NICKNLVCHALTKLLVFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHVLRWRLS 189
Query: 165 SL 166
+L
Sbjct: 190 AL 191
>gi|413956106|gb|AFW88755.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 574
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 123 MSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR-HSLLG 168
MS +DS+SMV KC+ KGA DFL+KP+R+NEL+NLWQHVWRR HS G
Sbjct: 1 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRRCHSSSG 47
>gi|3831441|gb|AAC69924.1| hypothetical protein [Arabidopsis thaliana]
Length = 203
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 43/66 (65%), Gaps = 20/66 (30%)
Query: 662 SQRDAALTKFRLKRKDRCYDKK--------------------VRYQSRKSLAEQRPRVKG 701
SQR+AAL KFRLKRKDRC+DKK VRYQSRK LAEQRPRVKG
Sbjct: 130 SQREAALMKFRLKRKDRCFDKKHLKQIQDQTDSMEMYKNGLQVRYQSRKKLAEQRPRVKG 189
Query: 702 QFVRQV 707
QFVR V
Sbjct: 190 QFVRTV 195
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ VL+ E D+ R + +L C Y+V V +G A + L +ID+VL ++ +P +
Sbjct: 11 IHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDELLKEDSNIDVVLLDLWMPEMD 70
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G+ LL L+ ++ +NIPVIMMS + V C+ GA D+L+KP+R ++ + HV
Sbjct: 71 GWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKDYLVKPIRIQMVKGIANHVI 130
Query: 162 RRHSL 166
+ L
Sbjct: 131 SSNKL 135
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 15/121 (12%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ +L+V+ D R+I+ + L+K Y V V +G AW L DLVLT+V +P+IS
Sbjct: 181 VHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNILINGNTKYDLVLTDVMMPNIS 240
Query: 102 GFALLTLVMEHDVCKNIPVIMMS--------LHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF LL + +H KN+PVI+MS +D+I + G DFL KP+ + L
Sbjct: 241 GFDLLQRINDHAEIKNVPVILMSGTAIDYKYANDTIKI-------GGQDFLTKPIAKELL 293
Query: 154 R 154
+
Sbjct: 294 K 294
>gi|125558184|gb|EAZ03720.1| hypothetical protein OsI_25852 [Oryza sativa Indica Group]
Length = 211
Score = 79.3 bits (194), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
++ DDS+ R +I+ALLR+ YRV AV G A E L P ++ +++T+ +P ++G+
Sbjct: 94 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEP-NVSMIITDYWMPEMTGY 152
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LL + E K IPV++MS + + + +C+ +GA DFL+KPVR
Sbjct: 153 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVR 198
>gi|413956108|gb|AFW88757.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 587
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 123 MSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR-HSLLG 168
MS +DS+SMV KC+ KGA DFL+KP+R+NEL+NLWQHVWRR HS G
Sbjct: 1 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRRCHSSSG 47
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 19/22 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKV 684
QR+AAL KFRLKRKDR + KKV
Sbjct: 547 QREAALNKFRLKRKDRNFGKKV 568
>gi|357142908|ref|XP_003572733.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 143
Score = 79.0 bits (193), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L VL V+ R +I+ +LR +RV AV G A E L P ++ +++T+ +P ++
Sbjct: 24 LHVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGLEP-NVSMIITDYWMPEMT 82
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ ++ V
Sbjct: 83 GYELLKKVKESSKLKQIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRVFSRV 141
>gi|145514151|ref|XP_001442986.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410347|emb|CAK75589.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V+ VLL E R + LL+ C Y+V A G+ A + L + DL+L ++ LP +
Sbjct: 13 VINVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDLGLPEM 72
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
+G LL ++ D K++PVIMMS D V C+ GA D+++KPV +L+ L V
Sbjct: 73 TGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQGLQTFV 132
Query: 161 WRR 163
++
Sbjct: 133 KKK 135
>gi|125600088|gb|EAZ39664.1| hypothetical protein OsJ_24093 [Oryza sativa Japonica Group]
Length = 212
Score = 79.0 bits (193), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
++ DDS+ R +I+ALLR+ YRV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 95 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEPN-VSMIITDYWMPEMTGY 153
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LL + E K IPV++MS + + + +C+ +GA DFL+KPVR
Sbjct: 154 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVR 199
>gi|110617744|gb|ABG78591.1| response regulator [Oryza sativa Japonica Group]
Length = 210
Score = 79.0 bits (193), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
++ DDS+ R +I+ALLR+ YRV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 93 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEPN-VSMIITDYWMPEMTGY 151
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LL + E K IPV++MS + + + +C+ +GA DFL+KPVR
Sbjct: 152 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVR 197
>gi|145514664|ref|XP_001443237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410615|emb|CAK75840.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
++ VLL E R + LL+ C Y+V A G+ A + L + DL+L ++ LP +
Sbjct: 13 IINVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDLGLPEM 72
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
+G LL ++ D K++PVIMMS D V C+ GA D+++KPV +L+ L V
Sbjct: 73 TGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQGLQTFV 132
Query: 161 WRR 163
++
Sbjct: 133 KKK 135
>gi|418067249|ref|ZP_12704597.1| putative two component, sigma54 specific, transcriptional
regulator, Fis family [Geobacter metallireducens RCH3]
gi|373559127|gb|EHP85436.1| putative two component, sigma54 specific, transcriptional
regulator, Fis family [Geobacter metallireducens RCH3]
Length = 410
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ + + R+II +L GYRVAA P G A E L+ D++LT++++ +SG
Sbjct: 5 ILIVDDERAQREIIQTILEGEGYRVAAAPGGREALEQLET--SEFDVILTDLKMQGMSGM 62
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL V+E D + IMM+ H ++ ++ M KGA D+L KP+ R+ L + + R
Sbjct: 63 ELLERVLEADPLQC--AIMMTAHGTVDSAVEAMKKGAFDYLEKPLERDNLLLTLRRAFER 120
Query: 164 HSLL 167
+LL
Sbjct: 121 VNLL 124
>gi|242043834|ref|XP_002459788.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
gi|241923165|gb|EER96309.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
Length = 168
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Query: 39 RMVLRVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
+ V+ ++ DD + R +++ALLR+ YRV AV G A E L P+ + +++T+
Sbjct: 43 KEVVEPCVIAVDDCSVDRALVTALLRRSKYRVTAVDSGKRALEILGSEPN-VSMIITDYW 101
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+P ++G+ LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ +
Sbjct: 102 MPEMTGYDLLKKVKESSKLKQIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRI 161
>gi|359950754|gb|AEV91167.1| MYB-related protein [Triticum aestivum]
Length = 630
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
Query: 87 SIDLVLTEVELPSISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
+ D+++++V +P ++GF LL LV +E D +PVIMMS +V+K + GA D+LI
Sbjct: 8 AFDVIISDVHMPDMNGFRLLELVGLEMD----LPVIMMSADSRTDLVMKGIKHGACDYLI 63
Query: 146 KPVRRNELRNLWQHVWRR 163
KPVR EL+N+WQHV R+
Sbjct: 64 KPVRMEELKNIWQHVVRK 81
>gi|310818979|ref|YP_003951337.1| Sigma-54 dependent DNA-binding response regulator FrgC [Stigmatella
aurantiaca DW4/3-1]
gi|309392051|gb|ADO69510.1| Sigma-54 dependent DNA-binding response regulator FrgC [Stigmatella
aurantiaca DW4/3-1]
Length = 464
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLLVE D + +++ ALL + G V G A L+ P ID+V+++V +P +SG
Sbjct: 9 VLLVEDDRAVAKVLGALLTQAGLTVHTAWSGEEALTLLRQMP--IDVVVSDVRMPGMSGM 66
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
LLT V C +PV++M+ H ++ M ++ M GAADF++KP R E+
Sbjct: 67 ELLTEVTRS--CPEVPVVLMTAHGTVPMAVEAMRAGAADFILKPFDRQEI 114
>gi|115447443|ref|NP_001047501.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|49389191|dbj|BAD26481.1| putative response regulator [Oryza sativa Japonica Group]
gi|87116382|dbj|BAE79350.1| typeA response regulator 11 [Oryza sativa Japonica Group]
gi|113537032|dbj|BAF09415.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|118790875|tpd|FAA00270.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218191220|gb|EEC73647.1| hypothetical protein OsI_08171 [Oryza sativa Indica Group]
gi|222623289|gb|EEE57421.1| hypothetical protein OsJ_07618 [Oryza sativa Japonica Group]
Length = 147
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R +I+ +LR +RV AV G A E L P ++ +++T+ +P ++G+
Sbjct: 30 VLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGSEP-NVSMIITDYWMPEMTGY 88
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ L+ V
Sbjct: 89 ELLKKVKESSKLKKIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRLFSRV 145
>gi|391231317|ref|ZP_10267523.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
gi|391220978|gb|EIP99398.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
Length = 502
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ ++ R ++S L + G+ VA DG AA E L+ P DLVL ++ +P + G
Sbjct: 118 RILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERLRAGP--FDLVLLDMMMPVLDG 175
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+ L + V +++PVIM+S D ++ V++C+ +GA DFL KP LR
Sbjct: 176 YGALDAIKTDPVLRHLPVIMISALDELASVVRCIERGAEDFLPKPFNPTLLR 227
>gi|85860826|ref|YP_463028.1| response regulator [Syntrophus aciditrophicus SB]
gi|85723917|gb|ABC78860.1| response regulator with sigma 54 interaction domain [Syntrophus
aciditrophicus SB]
Length = 502
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
+VL+V+ + + R ++ A+L+K GY+VA DGL A E L+ ID+V+T++++P +SG
Sbjct: 3 KVLIVDDELNMRVVLQAMLKKKGYQVAQAADGLEALECLE--KEQIDVVVTDLKMPKLSG 60
Query: 103 FALLTLVMEH--DVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
LL EH PVI+++ H +I + + KGA D++ KP R+EL ++ +
Sbjct: 61 LGLL----EHVTSTYPETPVIIITAHGTIETAVDALKKGAFDYITKPFDRDELISVIEKA 116
Query: 161 WR 162
R
Sbjct: 117 IR 118
>gi|307110656|gb|EFN58892.1| hypothetical protein CHLNCDRAFT_140816 [Chlorella variabilis]
Length = 1229
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS-----IDLVLTEV 95
+ VL+++ + S R LL GY G +A + L+ R + +D++L
Sbjct: 5 TITVLVID-NTSARASTLRLLEAAGYSTVEAQSGGSALQLLEERAAATGSPDVDVILKNH 63
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+ P + L + EH ++IP +++S DS +VLKC+ GA DF ++P+R NE+
Sbjct: 64 DPPGSNAVRFLHRLSEHPSLRSIPTVVVSNQDSREVVLKCLSSGAVDFWVRPLRPNEVHM 123
Query: 156 LWQHVWRRH 164
LW VWR+
Sbjct: 124 LWTRVWRQQ 132
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 667 ALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 710
A +++ KRK + KK+RYQ+RK+LA+QRPRV+GQFVR K E
Sbjct: 917 AYARYKEKRKRLHFGKKIRYQTRKALADQRPRVRGQFVRMAKEE 960
>gi|147765741|emb|CAN73375.1| hypothetical protein VITISV_019100 [Vitis vinifera]
Length = 659
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 56 IISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVC 115
I++ +LR Y+V V + L A TL+ LV+T+V +P + GF V E
Sbjct: 36 IVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE--- 92
Query: 116 KNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+PV+MMS D S +LK + GAA +++KPV ++L+N+WQ+
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQY 136
>gi|357116980|ref|XP_003560254.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 172
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
++ DDS+ R +I+ALLR+ Y+V AV G A E L P ++ +++T+ +P ++G+
Sbjct: 55 VMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEILDSEP-NVSMIITDYWMPEMTGY 113
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
LL V E K IPV++MS + + + +C+ +GA +FL+KPVR +++ +
Sbjct: 114 DLLKKVKESSELKQIPVVIMSSENVPTRITRCLEEGAEEFLLKPVRPSDISRI 166
>gi|327342204|gb|AEA50889.1| toc1 [Populus tremula]
Length = 336
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFVR+V D N
Sbjct: 251 RREAALIKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNG 304
>gi|115450024|ref|NP_001048613.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|48716336|dbj|BAD22948.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273479|emb|CAI79407.1| Type A response regulator 3 [Oryza sativa Indica Group]
gi|87116380|dbj|BAE79349.1| typeA response regulator 3 [Oryza sativa Japonica Group]
gi|113538144|dbj|BAF10527.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|118790834|tpd|FAA00265.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125541719|gb|EAY88114.1| hypothetical protein OsI_09552 [Oryza sativa Indica Group]
gi|125584256|gb|EAZ25187.1| hypothetical protein OsJ_08987 [Oryza sativa Japonica Group]
Length = 131
Score = 77.0 bits (188), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Query: 37 LPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
+P VL V+ R +IS LLR YRV V G A E L ++ +++T+
Sbjct: 6 VPEPEPHVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSL-DRNVHMIITDYC 64
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+P ++GF LL V E K IPV++MS +S + + +C+ +GA DFLIKPVR +++ L
Sbjct: 65 MPEMTGFDLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLIKPVRPSDVSRL 124
Query: 157 WQHV 160
V
Sbjct: 125 CNRV 128
>gi|258513413|ref|YP_003189635.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfotomaculum acetoxidans DSM 771]
gi|257777118|gb|ACV61012.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfotomaculum acetoxidans DSM 771]
Length = 486
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ +LLVE D +R + LRK G+R+ DG A K +LV++++ +P IS
Sbjct: 1 MNILLVEDDLDSRLYLGQFLRKLGHRIVESEDGEDALS--KFPTGQFNLVISDIRMPKIS 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL ++ ++ +I+ + H +S+ ++ + GA D+L+KP+ NEL + Q V
Sbjct: 59 GLELLQTIVHLPAGRDTDIILFTGHVDVSLAIEALRAGAYDYLLKPINVNELTAVIQRVS 118
Query: 162 RRHSLL 167
R SLL
Sbjct: 119 ERQSLL 124
>gi|297741112|emb|CBI31843.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 56 IISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVC 115
I++ +LR Y+V V + L A TL+ LV+T+V +P + GF V E
Sbjct: 36 IVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE--- 92
Query: 116 KNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+PV+MMS D S +LK + GAA +++KPV ++L+N+WQ+
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQY 136
>gi|302805348|ref|XP_002984425.1| hypothetical protein SELMODRAFT_120328 [Selaginella moellendorffii]
gi|300147813|gb|EFJ14475.1| hypothetical protein SELMODRAFT_120328 [Selaginella moellendorffii]
Length = 90
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 40/45 (88%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
+R+AAL KFR KRK+RC++KKVRYQSRK LAEQRPRV+GQFV Q
Sbjct: 34 RREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRVRGQFVSQA 78
>gi|123486693|ref|XP_001324781.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
gi|121907669|gb|EAY12558.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
Length = 637
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L +L V+ D ++ L+ GY V+ +G A E LK ++ DL+L++V +P ++
Sbjct: 12 LHILAVDDDAVQLHAVTKALKSLGYHVSNASNGQEALEVLKSG-NTFDLILSDVMMPVMN 70
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G L + IP+IMMS +D +V C+ KGA D++IKP+ L+N++ +VW
Sbjct: 71 GPQFLQETRADSRFEQIPIIMMSSNDQYEIVFDCLSKGADDYIIKPLTPQVLKNMYANVW 130
Query: 162 RR 163
+
Sbjct: 131 LK 132
>gi|255547922|ref|XP_002515018.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546069|gb|EEF47572.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 419
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y+VA A L+ R D+V+ +V +
Sbjct: 18 LRVLVVDNDPTWSRILEKMLKKCSYQVATC-GSRDALNMLRGRKDEYDIVICDVTTSDMD 76
Query: 102 GFALLTLVMEHDVCK-NIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL EH K + PVI S S + K + GA D+L+KP+R ELRN+WQHV
Sbjct: 77 GFRLL----EHIGLKMDCPVINASALXXASALQKGVRHGACDYLLKPIRMKELRNIWQHV 132
Query: 161 WRR 163
+R+
Sbjct: 133 FRK 135
>gi|373854676|ref|ZP_09597474.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
gi|372472543|gb|EHP32555.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
Length = 502
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ ++ R ++S L + G+ VA DG AA E L+ P DLVL ++ +P + G
Sbjct: 118 RILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERLRAGP--FDLVLLDMMMPVLDG 175
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+ L + +++PVIM+S D ++ V++C+ +GA DFL KP LR
Sbjct: 176 YGALDAIKTDPALRHLPVIMISALDELASVVRCIERGAEDFLPKPFNPTLLR 227
>gi|404498006|ref|YP_006722112.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
gi|78195604|gb|ABB33371.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
Length = 462
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ + + R+II +L GYRVAA P G A E L+ D++LT++++ +SG
Sbjct: 5 ILIVDDERAQREIIQTILEGEGYRVAAAPGGREALEQLET--SEFDVILTDLKMQGMSGM 62
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL V+E D + IMM+ H ++ ++ M KGA D+L KP+ R+ L + + R
Sbjct: 63 ELLERVLEADPLQC--AIMMTAHGTVDSAVEAMKKGAFDYLEKPLERDNLLLTLRRAFER 120
Query: 164 HSLL 167
+LL
Sbjct: 121 VNLL 124
>gi|359828774|gb|AEV76989.1| type A response regulator 5, partial [Triticum aestivum]
Length = 119
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
++ DDS+ R +IS +LR +RV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 2 VLAVDDSSVDRAVISGILRSSRFRVTAVDSGKRALELLGSEPN-VSMIITDYWMPEMTGY 60
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ L V R
Sbjct: 61 ELLKKVKESSKLKEIPVVIMSSENVPTRISRCLEEGAEDFLMKPVRPSDVSRLCSRVLR 119
>gi|109631206|gb|ABG35779.1| SRR200 [Striga asiatica]
Length = 158
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 17/138 (12%)
Query: 42 LRVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKC------------RP-- 85
+R ++ DDS R++I LL+ Y+V V G+ A E L +P
Sbjct: 8 MRFHVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGVKALEFLGLLDNDDTNSKSVSQPRS 67
Query: 86 -HSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFL 144
H +DL++T+ +P+++G+ LL + E ++ K+IPV++MS + S + C+ +GA +F
Sbjct: 68 NHIVDLIITDYSMPALTGYDLLRKIKESEILKDIPVVIMSSENIPSRINSCLEQGAQEFF 127
Query: 145 IKPVRRNELRNLWQHVWR 162
+KPV+++++ L H+ R
Sbjct: 128 VKPVQQSDVNKLRPHLMR 145
>gi|162458935|ref|NP_001104854.1| aberrant phyllotaxy1 [Zea mays]
gi|11041692|dbj|BAB17300.1| response regulator [Zea mays]
gi|414586309|tpg|DAA36880.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 135
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R +I+ +LR +RV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 18 VLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLGTEPN-VSMIITDYWMPEMTGY 76
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL + E K IPV++MS + + + +C+ +GA DFL+KPVR +++ L V R
Sbjct: 77 ELLKKIKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPSDVSRLCSRVLR 135
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 19/134 (14%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ +L+V+ D R +++ +L+K + V V +G AW+TL DLVLT+V +P ++
Sbjct: 168 VHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNGEEAWDTLLNGKVMYDLVLTDVMMPMVT 227
Query: 102 GFALLTLVMEHDVCKNIPVIMMS--------LHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF LL + EH K+IPVI+MS +D+I + G DFL KP+ + L
Sbjct: 228 GFDLLQRINEHIEIKHIPVILMSGTAVDYKYANDTIKI-------GGQDFLTKPIAKELL 280
Query: 154 R----NLWQHVWRR 163
+ + +W++
Sbjct: 281 KKKIDTVLTSIWQK 294
>gi|242076534|ref|XP_002448203.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
gi|241939386|gb|EES12531.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
Length = 134
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R +I+ +LR +RV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 17 VLAVDDSSVDRAVIAGILRSSHFRVTAVDSGKRALELLGTEPN-VSMIITDYWMPEMTGY 75
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL V E K IPV++MS + + + +C+ +GA DFL+KPVR ++ L V R
Sbjct: 76 ELLKKVKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPADVSRLCSRVLR 134
>gi|115459496|ref|NP_001053348.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|71273483|emb|CAI79409.1| Type A response regulator 5 [Oryza sativa Indica Group]
gi|87116378|dbj|BAE79348.1| typeA response regulator 5 [Oryza sativa Japonica Group]
gi|113564919|dbj|BAF15262.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|116310946|emb|CAH67883.1| OSIGBa0153E02-OSIGBa0093I20.12 [Oryza sativa Indica Group]
gi|118790846|tpd|FAA00266.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215741219|dbj|BAG97714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195239|gb|EEC77666.1| hypothetical protein OsI_16696 [Oryza sativa Indica Group]
Length = 134
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R +IS +LR +RV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 17 VLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEPN-VSMIITDYWMPEMTGY 75
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL V E K IPV++MS + + + +C+ +GA DFL+KPV+ +++ L V R
Sbjct: 76 ELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRLCSRVLR 134
>gi|147798455|emb|CAN72192.1| hypothetical protein VITISV_005693 [Vitis vinifera]
Length = 790
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 20 TEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVP---DGLA 76
+EK SS V T E F + VL+V+ D + I+S +LR Y V V D LA
Sbjct: 501 SEKASSSSVTPT--EEFKGHRDICVLVVDCDPTCLMIVSGMLRALTYEVLTVDRAVDALA 558
Query: 77 AWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCM 136
C +DLV+TE+ +P + G LL E +PV++MS + ++LK +
Sbjct: 559 MTLEGGC---GVDLVMTELHMPDMYGLDLLD---EIRRTSKLPVVIMSADSNEDVMLKSL 612
Query: 137 LKGAADFLIKPVRRNELRNLWQHVWRR 163
+GA +L+KPV ++ N WQ+V++R
Sbjct: 613 RRGAEYYLVKPVLMEDVTNFWQYVFKR 639
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ D ++ IS +LR Y+V V A + R +DLV+TE+ +P + G
Sbjct: 23 VLVVDCDPTSLMTISGMLRALTYQVVTVERVTDALAMILERKDEVDLVMTELHMPDMDGL 82
Query: 104 ALLTLVMEHDVCKNIPVI------------MMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LL + + +PV+ +MS +L+ + KGA ++ KPV
Sbjct: 83 QLLDEIQK---TSKLPVVNFFFFLDGNGNPVMSADAEEDAMLRSLNKGATYYMXKPVEMG 139
Query: 152 ELRNLWQHVW 161
++NLWQ+V+
Sbjct: 140 SIKNLWQYVF 149
>gi|57834122|emb|CAE05717.2| OSJNBb0065J09.13 [Oryza sativa Japonica Group]
Length = 137
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R +IS +LR +RV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 17 VLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEPN-VSMIITDYWMPEMTGY 75
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL V E K IPV++MS + + + +C+ +GA DFL+KPV+ +++ L V R
Sbjct: 76 ELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRLCSRVLR 134
>gi|297733947|emb|CBI15194.3| unnamed protein product [Vitis vinifera]
Length = 159
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 24 GSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC 83
G S + + + R LR+LL + + + + +++LL++C Y+ + A L
Sbjct: 15 GVSGSTNKKIRALIDRSKLRILLCDTNAGSCKEVASLLKECSYQGSTGE----AIHVLSS 70
Query: 84 RPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADF 143
SID+VL E++LP + +L + E + IPVIM+ D ISM+ C+ GA D+
Sbjct: 71 EGPSIDIVLAELDLPMANCLKMLKYITEDQELRCIPVIMLVTEDKISMIANCLRYGAVDY 130
Query: 144 LIKPVRRNELRNLWQHV 160
L+ P+ NEL NL H+
Sbjct: 131 LLTPLGINELLNLSIHM 147
>gi|222629233|gb|EEE61365.1| hypothetical protein OsJ_15511 [Oryza sativa Japonica Group]
Length = 526
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R +IS +LR +RV AV G A E L P+ + +++T+ +P ++G+
Sbjct: 17 VLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEPN-VSMIITDYWMPEMTGY 75
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL V E K IPV++MS + + + +C+ +GA DFL+KPV+ +++ L V R
Sbjct: 76 ELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRLCSRVLR 134
>gi|356573692|ref|XP_003554991.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 315
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L V+ V+ D + +II + KC YRVA D A + ID++L +V LP++
Sbjct: 14 LWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDRIDVILVDVHLPNMD 73
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L + + +IPVI+MS+ S S V K + GA D+ KP N+ + +W+HV
Sbjct: 74 GYEFLKHINKE---IDIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSENQFKIMWKHV 129
>gi|300710684|ref|YP_003736498.1| response regulator receiver protein [Halalkalicoccus jeotgali B3]
gi|448295010|ref|ZP_21485084.1| response regulator receiver protein [Halalkalicoccus jeotgali B3]
gi|299124367|gb|ADJ14706.1| response regulator receiver protein [Halalkalicoccus jeotgali B3]
gi|445585202|gb|ELY39502.1| response regulator receiver protein [Halalkalicoccus jeotgali B3]
Length = 122
Score = 74.7 bits (182), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 63/110 (57%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
V +V+ + R+++S L GY VA PDG A W+ L+ D++L +V +P+++GF
Sbjct: 5 VFVVDDEPELRELVSFHLETAGYDVATYPDGEACWQQLQGTDSPPDVLLVDVMMPNMNGF 64
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
LL V + + +PVIM++ + + V++ GA D+L KP R EL
Sbjct: 65 QLLKAVRDGEGLSELPVIMLTARGTETDVVQGFDIGATDYLTKPFRSQEL 114
>gi|225427316|ref|XP_002279150.1| PREDICTED: two-component response regulator-like APRR2 [Vitis
vinifera]
gi|297742160|emb|CBI33947.3| unnamed protein product [Vitis vinifera]
Length = 557
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+ F P+ LRVLL++ D ++ I + L + Y V+ + A + +P S + +
Sbjct: 11 WKDF-PKG-LRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESFHVAI 68
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
EV + F L + K++P IM+S +S ++KC+ GA +FL KP+ ++
Sbjct: 69 VEVSTGNNGSFKFL------ETAKDLPTIMISSIHCLSTMMKCIALGAVEFLRKPLSEDK 122
Query: 153 LRNLWQHVWRRHSLLGGHV-PQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKV 211
LRN+WQHV + GG V P++L V ++ + M + + +++ N +
Sbjct: 123 LRNIWQHVVHKAFNAGGSVLPESLKPVKESVASMLQLQMENEEPRNESSAETLNVSNVHE 182
Query: 212 SDAQSSRTSSPYLEAESAYM-QNMQGLSQLKCRSASNTCSTDME 254
+D S + Y + + Q + L C +N CST+ E
Sbjct: 183 NDHMQSAGTDKYPAPSTPQLKQGGRSLDDGDCLDQTN-CSTEKE 225
>gi|50400667|sp|Q9LZJ8.1|ARR20_ARATH RecName: Full=Putative two-component response regulator ARR20
gi|7362747|emb|CAB83117.1| putative protein [Arabidopsis thaliana]
Length = 426
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 23 DGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK 82
DG + + E FL + RVLLV AD ++ + L+ + Y+V G A L
Sbjct: 23 DGIASPINDDDEEFLTKSN-RVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLM 79
Query: 83 CRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAAD 142
H IDLV+ + +P I+G L ++ + ++PV++MS V++ + GA D
Sbjct: 80 KNKHEIDLVIWDFHMPDINGLDALNIIGKQ---MDLPVVIMSHEYKKETVMESIKYGACD 136
Query: 143 FLIKPVRRNELRNLWQHVWRR 163
FL+KPV + + LW+HV+R+
Sbjct: 137 FLVKPVSKEVIAVLWRHVYRK 157
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ +L+V+ D + R+++ LL K Y V V AW L DLVLT+V +P ++
Sbjct: 145 IHILVVDDDITQRKVLQNLLSKVFYNVTLVSSAEEAWNMLIYGTTKFDLVLTDVMMPQVT 204
Query: 102 GFALLTLVMEHDVCKNIPVIMMS--------LHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF LL + EH KNIPVI+MS +D+I + G DF+ KP+ + L
Sbjct: 205 GFDLLQRINEHPEIKNIPVILMSGTALDCKYANDTIKI-------GGQDFVTKPIAKELL 257
Query: 154 R 154
+
Sbjct: 258 K 258
>gi|333893877|ref|YP_004467752.1| two-component system response regulator [Alteromonas sp. SN2]
gi|332993895|gb|AEF03950.1| two-component system response regulator [Alteromonas sp. SN2]
Length = 446
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LLV+ D S ++++ L GY+V AV DG AA K + + D+VL+++ +P + G
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYQVTAVEDGNAALR--KLQNDAFDVVLSDLRMPGLDGL 68
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+L +M + K+IPVI+M+ H +IS + +G FL KPV +ELR L Q
Sbjct: 69 SLFEEIM--GIRKDIPVILMTAHGTISDAVAATQRGVFGFLPKPVDHDELRTLLQ 121
>gi|242067106|ref|XP_002454842.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
gi|241934673|gb|EES07818.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
Length = 134
Score = 73.9 bits (180), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R +IS LLR YRV V G A E L S+ +++T+ +P +SG+
Sbjct: 13 VLAVDDSIVDRAVISRLLRSSKYRVTTVDSGKRALEVLSL-DDSVHMIITDYCMPEMSGY 71
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
LL V E + IPV++MS +S + + +C+ +GA +FLIKPVR +++ L
Sbjct: 72 ELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEFLIKPVRASDVSRL 124
>gi|302817481|ref|XP_002990416.1| pseudo response regulator [Selaginella moellendorffii]
gi|300141801|gb|EFJ08509.1| pseudo response regulator [Selaginella moellendorffii]
Length = 592
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVP---DGLAAWETLKCRPHSID 89
W+ F P+ L VL+ AD R+ IS +L+ C YRV A D LAA E K H+
Sbjct: 9 WKDF-PKG-LHVLVAIADGDDREEISGILQSCSYRVTAFTSEEDALAAIEKPKTPFHAAM 66
Query: 90 LVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
+ T ++ GF +L + K + VIM+S + I +++ + GAADFL KP
Sbjct: 67 VDATNRDI--FDGFKVL------EAAKELAVIMISSTEDIETMMRAISLGAADFLQKPFS 118
Query: 150 RNELRNLWQHVWRRHSL 166
+L+N+WQHV R+ L
Sbjct: 119 EEKLKNIWQHVARKAML 135
>gi|350553470|ref|ZP_08922644.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Thiorhodospira sibirica ATCC
700588]
gi|349790555|gb|EGZ44463.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Thiorhodospira sibirica ATCC
700588]
Length = 699
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LLV+ D + R +++A L++ GYRV G+ A E + R H +DLVL +V +P ISGF
Sbjct: 12 LLLVDDDPTLRLLVAAGLQQQGYRVIQAEQGVQALE--QIRAHPVDLVLLDVMMPGISGF 69
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+L + +++PV+M++ D ++ V + GA DF+ KP+ L L Q V R
Sbjct: 70 EVLRTLRALTGHEHLPVLMLTGADDVASVNEAFEAGATDFITKPI---NLPLLIQRV--R 124
Query: 164 HSLLGGHVPQNLHDVY 179
++L G L +Y
Sbjct: 125 YALRGAQRETMLRQLY 140
>gi|444918784|ref|ZP_21238843.1| hypothetical protein D187_01664 [Cystobacter fuscus DSM 2262]
gi|444709467|gb|ELW50482.1| hypothetical protein D187_01664 [Cystobacter fuscus DSM 2262]
Length = 960
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLL E + R + LL + GY V AV DG AA E + RP +LVL++V +P + GF
Sbjct: 612 VLLAEDNADMRAHLRRLLEEAGYTVEAVADGQAALERARARPP--ELVLSDVMMPGLDGF 669
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
LL + +H + PVI++S +++ + GA+D+L+KP EL
Sbjct: 670 ELLRALKDHAPTSHTPVILLSARAGQEAIVEGLAAGASDYLVKPFSAREL 719
>gi|357144070|ref|XP_003573159.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 135
Score = 73.2 bits (178), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L VL V+ R IIS LLR Y+V V G A E L + +++T+ +P ++
Sbjct: 7 LHVLAVDDSLVDRAIISRLLRSSKYQVTTVDSGKRALEVLSLE-REVHMIITDYCMPEMT 65
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
G+ LL V E + IPV++MS +S + + +C+ +GA +FLIKPVR +++ L
Sbjct: 66 GYELLKRVKETAELREIPVVIMSSENSPARIRRCLEEGAEEFLIKPVRPSDVSRL 120
>gi|313483769|gb|ADR51713.1| pseudo-response regulator [Secale cereale]
Length = 407
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 38/45 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 355 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 399
>gi|78355118|ref|YP_386567.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
gi|78217523|gb|ABB36872.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
Length = 139
Score = 73.2 bits (178), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+VE D TR I+ ++ G++V V DG AWE L+ P IDL++T+V +P + G
Sbjct: 4 ILIVEDDPITRGILRDIVTSYGHKVLDVADGRTAWERLQNDP-DIDLMITDVRMPGLDGM 62
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
L+ ++ +D + +PVI+ S + + + + +GA+ F+ KP+ EL++ Q+
Sbjct: 63 ELVGMLRSNDRLQGLPVIITSGVVGLRQIARLLRRGASSFIAKPIDPKELQHCIQN 118
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M ++ + D + R+I+ +LRK GY V A +G + L+ SIDL+L ++++P
Sbjct: 1 MTRHIVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLLRQSEESIDLILLDIKMPG 60
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
SGF LL ++ IP++M++ + + +K M GA+D+L KPV R L
Sbjct: 61 FSGFELLEMI--RASYPQIPIVMITAFNDLDTGMKAMRMGASDYLAKPVHREAL 112
>gi|427401606|ref|ZP_18892678.1| hypothetical protein HMPREF9710_02274 [Massilia timonae CCUG 45783]
gi|425719715|gb|EKU82647.1| hypothetical protein HMPREF9710_02274 [Massilia timonae CCUG 45783]
Length = 132
Score = 73.2 bits (178), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 61/109 (55%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+VE DD Q++ +L + GYRV + DG AA E + P DLVL +V LP + GF
Sbjct: 11 VLVVEDDDHIAQVLRFMLERQGYRVLHLADGRAASEYVAASPEIPDLVLMDVMLPHLDGF 70
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
++ L +P++M++ ++ ++ + GA DF+ KP + NE
Sbjct: 71 EIVALARARAEWAAVPILMLTAKNTERDTVRALDAGANDFVSKPFQPNE 119
>gi|345879475|ref|ZP_08831119.1| protein-L-isoaspartate O-methyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344223511|gb|EGV49970.1| protein-L-isoaspartate O-methyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 580
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 38 PRMVLRVLLVEADD--STRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
P + LR + ADD S R I++ALL+K GY+V DG A E K R HSID+VL +V
Sbjct: 10 PNLKLRGTALVADDELSNRVILNALLKKLGYQVIQAVDGADAVE--KFRQHSIDIVLMDV 67
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+P + G+A ++ K IPV+ ++ + +C+ G DFL KP L
Sbjct: 68 MMPVMDGYAATEIIKSETADKFIPVLFLTAMTDDKALARCIEVGGDDFLTKPYNHTVLSA 127
Query: 156 LWQHVWRRHSL 166
Q + R +L
Sbjct: 128 KIQSMERIQNL 138
>gi|442318181|ref|YP_007358202.1| Fis family transcriptional regulator [Myxococcus stipitatus DSM
14675]
gi|441485823|gb|AGC42518.1| Fis family transcriptional regulator [Myxococcus stipitatus DSM
14675]
Length = 468
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLLV+ D + +++ ALL + G A DG A L+ +P +D+V+++V +P + G
Sbjct: 9 VLLVDDDPAVAKVLGALLAQAGLTTYAAKDGQEALAHLERKP--VDVVVSDVRMPGMDGM 66
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
LLT + + ++PVI+++ H ++ + ++ M GAADF++KP R E+
Sbjct: 67 RLLTEIARN--WPDVPVILLTAHGTVPLAVEAMKAGAADFVLKPFDREEI 114
>gi|308812550|ref|XP_003083582.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
gi|116055463|emb|CAL58131.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
Length = 297
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+P + GF LL ++ N+PV+MMS + S+VL+ ++ GA D+L+KPVR ELRN+
Sbjct: 1 MPDVDGFKLLEIIQ---FELNLPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNI 57
Query: 157 WQHVWRR 163
WQHV RR
Sbjct: 58 WQHVVRR 64
>gi|258404235|ref|YP_003196977.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
gi|257796462|gb|ACV67399.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
Length = 448
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LL++ + +T +++SA L K GY V DG + L+ D+++T+++LP I+G
Sbjct: 6 RILLIDDEPNTLKVLSAFLTKEGYEVGTAKDGRSGLNHLQ--EGGWDMLITDLKLPDITG 63
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
+L V +PV+M++ + SIS ++ M GA ++L KPV +EL L Q+V+
Sbjct: 64 LDILEQV--KATWPKLPVVMITAYGSISNAVQAMKLGAFNYLTKPVDPDELLLLVQNVFE 121
Query: 163 RHSLLGGH--VPQNLHDVYHKGGAISEN 188
R LL + + + L D Y G + ++
Sbjct: 122 RSQLLEENQTMRRQLRDRYSLGNMVGKS 149
>gi|168809295|gb|ACA29404.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 323 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 366
>gi|356540587|ref|XP_003538769.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 570
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+ F P+ LRVLL+E D S+ I L Y+V+ D A L P + +
Sbjct: 11 WKDF-PKG-LRVLLLEGDSSSAAEIREQLEAMDYKVSTFYDENEALSALSSSPKGFHVAI 68
Query: 93 TEVELP-SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
EV S+ GF L + K++P IM S ++ ++KC+ GA +FL KP+ +
Sbjct: 69 VEVSTSCSLGGFKFL------ENAKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSED 122
Query: 152 ELRNLWQHV 160
+L+N+WQHV
Sbjct: 123 KLKNIWQHV 131
>gi|168809271|gb|ACA29392.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 323 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 366
>gi|168809305|gb|ACA29409.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809307|gb|ACA29410.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 323 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 366
>gi|197116480|ref|YP_002136907.1| response receiver-modulated cyclic diguanylate phosphodiesterase
[Geobacter bemidjiensis Bem]
gi|197085840|gb|ACH37111.1| response receiver-modulated cyclic diguanylate phosphodiesterase
[Geobacter bemidjiensis Bem]
Length = 357
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RV+LV+ D + ++ LL G+ V + +G A + L+ P D+VLT+V +P +SG
Sbjct: 8 RVVLVDDDPYVLESVALLLSVSGFEVTSFSNGHEALQLLRRSPP--DVVLTDVNMPQMSG 65
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LL + HD ++IPVI+M+ + + M + + KGA DF+IKP +
Sbjct: 66 IELLEQI--HDFDRDIPVILMTAYAELEMAVSAIKKGAFDFIIKPFK 110
>gi|168809301|gb|ACA29407.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809309|gb|ACA29411.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809311|gb|ACA29412.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 376
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 324 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 367
>gi|449434875|ref|XP_004135221.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
gi|449478516|ref|XP_004155339.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
Length = 233
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 74/129 (57%), Gaps = 12/129 (9%)
Query: 44 VLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS----------IDLV 91
V ++ DDS R +I LLR RV AV G+ A + L + + +D++
Sbjct: 29 VHVLAVDDSLVDRTVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSQVGFDGLKVDMI 88
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
+T+ +P ++G+ LL + E + IPV++MS + ++ + +C+ +GA DF++KPV+ +
Sbjct: 89 ITDYCMPGMTGYELLKKIKESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLS 148
Query: 152 ELRNLWQHV 160
+++ L +++
Sbjct: 149 DVKRLREYM 157
>gi|410861006|ref|YP_006976240.1| two-component system response regulator [Alteromonas macleodii
AltDE1]
gi|410818268|gb|AFV84885.1| two-component system response regulator [Alteromonas macleodii
AltDE1]
Length = 446
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LLV+ D S ++++ L GY V AV DG +A K + S D+VL+++ +P + G
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYDVTAVEDGQSALR--KLQNDSFDVVLSDLRMPGLDGL 68
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+L +M + K+IPVI+M+ H +I+ + +G FL KPV +ELR L Q
Sbjct: 69 SLFEEIM--GIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRTLLQ 121
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 610 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|427713660|ref|YP_007062284.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
gi|427377789|gb|AFY61741.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
Length = 600
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ ++ R + S L++ GY V DG A E L R + DL+L + +P ++GF
Sbjct: 193 ILVVDDVENNRVLFSRQLQRQGYEVDTAVDGYQALEKLSHRAY--DLILLDYMMPELNGF 250
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+L+ + ++IPVIM+S +D I V++C+ GA D+L KP+ LR
Sbjct: 251 QVLSRLKSDQKLRHIPVIMISANDEIDQVIRCIEIGAEDYLPKPLNSTLLR 301
>gi|413937817|gb|AFW72368.1| hypothetical protein ZEAMMB73_306899 [Zea mays]
Length = 278
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 709
S +R AAL KFR KRK+RC+DKKVRY +RK LAE R RV+GQFVR N
Sbjct: 200 SERRAAALAKFRQKRKERCFDKKVRYVNRKKLAETRLRVRGQFVRHASN 248
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 610 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 610 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|118351766|ref|XP_001009158.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila]
gi|89290925|gb|EAR88913.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila SB210]
Length = 135
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M + VL E D+ R ++ +L+ C Y+V AV +G A + L + ID+VL ++ +P
Sbjct: 1 MSIHVLFAEDDNFQRLAVTHILQLCNYQVTAVENGRIARDILLKQDQKIDIVLLDIRMPE 60
Query: 100 ISGFALLTLVMEH-DVCKNIPVIMMSLHD-SISMVLKCMLKGAADFLIKPVRRNELRNLW 157
+ LL+ + EH + + IPV+++SL+D I L+ +GA DF+IKP++ + +
Sbjct: 61 MDALELLSFMQEHSENLQKIPVVIISLNDLEIQTFLE---RGAKDFIIKPMKIQNAKAIA 117
Query: 158 QHV 160
++V
Sbjct: 118 KYV 120
>gi|322421716|ref|YP_004200939.1| Fis family two component sigma54 specific transcriptional regulator
[Geobacter sp. M18]
gi|320128103|gb|ADW15663.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter sp. M18]
Length = 455
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ + R I+SA+L K GYR+ AVP G A + L+ + DL+LT++++ ISG
Sbjct: 5 ILIVDDEKGQRDILSAILSKKGYRIHAVPSGEEALQELEQSEY--DLLLTDLKMQGISGM 62
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
L+ V+ + + + +MM+ H +I ++ M GA D+L KP+ R +L Q + R
Sbjct: 63 ELMERVLSDNPSQCM--VMMTAHGTIDSAVEAMKMGAFDYLAKPLEREDLILTVQRAFER 120
Query: 164 HSLL 167
LL
Sbjct: 121 IMLL 124
>gi|451946772|ref|YP_007467367.1| serine phosphatase RsbU, regulator of sigma subunit [Desulfocapsa
sulfexigens DSM 10523]
gi|451906120|gb|AGF77714.1| serine phosphatase RsbU, regulator of sigma subunit [Desulfocapsa
sulfexigens DSM 10523]
Length = 396
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ ++ + ++ A LR GY V DG+ A + C +S+DL+L ++ +P + GF
Sbjct: 10 VLVVDDSEAIQTLLKAYLRDGGYNVMGAVDGVEALDV--CLRNSVDLILLDIAMPKMDGF 67
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+L + + IPVIM+S + ++ ++ GA D++ KPV R EL
Sbjct: 68 SLCERLQSEKRLRAIPVIMLSAREDMASKMRSFELGAVDYITKPVGRGEL 117
>gi|308273188|emb|CBX29791.1| Transcriptional regulatory protein zraR [uncultured
Desulfobacterium sp.]
Length = 449
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLLVE + + +++L + GYR++AV DG AA + + + D+V++E+ LP +SG
Sbjct: 6 VLLVENNKNETAAMTSLFNRAGYRLSAVSDGYAALDIISGNQY--DMVISELNLPRMSGI 63
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL + E D N+PVI++S + ++ M GA DFL+KP+ + + ++R
Sbjct: 64 ELLVKIKEIDT--NLPVILISGDVCVKEAVEAMKNGAYDFLLKPLAAETVECIVSGIYR 120
>gi|115375378|ref|ZP_01462640.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
gi|115367580|gb|EAU66553.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
Length = 1358
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LL + + R ++ LL G+ V VPDG AA + + H LVLT+V +P + G
Sbjct: 688 RILLADDNADIRGYVTQLLTAQGWTVETVPDGEAALA--RAQAHPPHLVLTDVMMPRLDG 745
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL + H+ +++PVI++S ++ M +GA D+L+KP EL
Sbjct: 746 FGLLRALKAHEKTQHVPVILLSARAGEEATVEGMQQGADDYLVKPFSAKEL 796
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWE-TLKCRPHSIDLVLTEVELPSIS 101
R+LLVE R +S L + G+ VAA DG+ E L RP D+ L +V LP I
Sbjct: 1212 RILLVEDSADIRDSLSDFLEELGHEVAAARDGVEGVEQLLALRP---DVALIDVGLPGID 1268
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ + V + + ++ ++ + K G L KP+ +EL
Sbjct: 1269 GYEVARRVRAAPGGEQLYLVALTGYGGPEARAKAKRAGFDLHLTKPINIDEL 1320
>gi|448657370|ref|ZP_21682640.1| response regulator receiver protein [Haloarcula californiae ATCC
33799]
gi|445762912|gb|EMA14123.1| response regulator receiver protein [Haloarcula californiae ATCC
33799]
Length = 126
Score = 71.6 bits (174), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSI-DLVLTEVELP 98
M +++ E D++TR+++ L G+ V A DG A WE L R DLV+ +V +P
Sbjct: 1 MTAEIVIAEDDETTREVVEFNLTDNGWDVVAFTDGDACWEHLGSRTSDPPDLVVLDVMMP 60
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ G ++L + +HD ++PV+M++ + +++ + GA DF+ KP EL
Sbjct: 61 ELDGISVLERIRDHDALVDLPVVMLTSRNREEDIVQALDAGADDFVAKPFSEAEL 115
>gi|307152410|ref|YP_003887794.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7822]
gi|306982638|gb|ADN14519.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7822]
Length = 1382
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R++L + + R+ + LL K Y+V AV DG+AA E + R H DLVLT+V +P ++G
Sbjct: 630 RIILADDNADMREYVKRLLNKL-YQVEAVGDGMAALEAI--RRHPPDLVLTDVMMPQLNG 686
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL + + + + +P+I++S +++ + GA D+L+KP EL
Sbjct: 687 FELLQQLRSNPLTQELPIILLSARAGEEYLVEALEAGADDYLVKPFSAREL 737
>gi|358345518|ref|XP_003636824.1| Response regulator [Medicago truncatula]
gi|358348887|ref|XP_003638473.1| Response regulator [Medicago truncatula]
gi|355502759|gb|AES83962.1| Response regulator [Medicago truncatula]
gi|355504408|gb|AES85611.1| Response regulator [Medicago truncatula]
Length = 240
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + + LR C Y V A L+ DLV+ +V LP +
Sbjct: 12 MRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADVHLPDMD 71
Query: 102 GFALLTLVMEHDVCKNIPVI-MMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G LL LV ++PV+ M+S +V+K + GA+DFL+KPVR EL+ +WQHV
Sbjct: 72 GLKLLELVEL---ETDLPVVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKTIWQHV 128
Query: 161 WRR 163
R+
Sbjct: 129 IRK 131
>gi|61611704|gb|AAX47178.1| TIMING OF CAB 1 [Pisum sativum]
Length = 53
Score = 71.6 bits (174), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 40/45 (88%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
+R+AAL KFR KRK+RC+DKK+RY +RK LAE+RPRV+GQFV ++
Sbjct: 3 RREAALLKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVSKL 47
>gi|310825183|ref|YP_003957541.1| sensor protein [Stigmatella aurantiaca DW4/3-1]
gi|309398255|gb|ADO75714.1| Sensor protein [Stigmatella aurantiaca DW4/3-1]
Length = 1311
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LL + + R ++ LL G+ V VPDG AA + + H LVLT+V +P + G
Sbjct: 641 RILLADDNADIRGYVTQLLTAQGWTVETVPDGEAALA--RAQAHPPHLVLTDVMMPRLDG 698
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL + H+ +++PVI++S ++ M +GA D+L+KP EL
Sbjct: 699 FGLLRALKAHEKTQHVPVILLSARAGEEATVEGMQQGADDYLVKPFSAKEL 749
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWE-TLKCRPHSIDLVLTEVELPSIS 101
R+LLVE R +S L + G+ VAA DG+ E L RP D+ L +V LP I
Sbjct: 1165 RILLVEDSADIRDSLSDFLEELGHEVAAARDGVEGVEQLLALRP---DVALIDVGLPGID 1221
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ + V + + ++ ++ + K G L KP+ +EL
Sbjct: 1222 GYEVARRVRAAPGGEQLYLVALTGYGGPEARAKAKRAGFDLHLTKPINIDEL 1273
>gi|356495556|ref|XP_003516642.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 533
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+ F P+ LRVLL+E D S+ I L Y V+ D A L P + +
Sbjct: 11 WKDF-PKG-LRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGFHVAI 68
Query: 93 TEVELP-SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
EV S+ GF L + K++P IM S ++ ++KC+ GA +FL KP+ +
Sbjct: 69 VEVSTSCSLGGFKFL------ENSKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSED 122
Query: 152 ELRNLWQHVWRRHSLLGGHV 171
+L+N+WQHV + G +V
Sbjct: 123 KLKNIWQHVVHKAFNAGANV 142
>gi|300866045|ref|ZP_07110777.1| adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
gi|300335960|emb|CBN55935.1| adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
Length = 352
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ ++ R +++ L++ G++V DG+ A E + R H DLVL ++ +P ++G+
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHKVQVAEDGILALEMM--RSHPFDLVLLDIMMPQMNGY 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+L + D + IPVIM+S D I +++C+ GA D+L KP
Sbjct: 66 QVLEHLKADDKLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|422302232|ref|ZP_16389595.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9806]
gi|389788595|emb|CCI15630.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9806]
Length = 1037
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL+V+ + R++++ L K GYR+ DGL AWE L+ + DL+L ++E+P ++G
Sbjct: 907 RVLIVDDSVTVREMLAISLVKAGYRIEKARDGLEAWEKLQA-GLACDLILCDIEMPRLNG 965
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL+ + E + + IPV M++ S M KGA + +KP + L + Q +
Sbjct: 966 LELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKPYIEDVLLSAAQRLIA 1025
Query: 163 RHSLLGGHVPQN 174
L+ P +
Sbjct: 1026 GEVLIQKDSPAD 1037
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + +++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 752 VLIVDDSITVLELLSLSFSKAGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 806
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS-----LHDSISMVLKCMLKGAADFLIKPVRRNELR 154
++G LL + + +IPV +++ H ++ L GA+ + KP +L
Sbjct: 807 MNGLELLYNLRKDPRLASIPVALLTSRGAERHRQVAATL-----GASGYFTKPYTERDLL 861
Query: 155 NLWQHVWRRHSLLGGHV 171
+ + + LL +
Sbjct: 862 SAAERMIAGEVLLANSI 878
>gi|147817751|emb|CAN66659.1| hypothetical protein VITISV_031719 [Vitis vinifera]
Length = 205
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 24 GSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC 83
G S + + + R LR+LL + + + + +++LL++C Y+ + A L
Sbjct: 15 GVSGSTNKKIRALIDRSKLRILLCDTNAGSCKEVASLLKECSYQGSTG----EAIHVLSS 70
Query: 84 RPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADF 143
SID+VL E++LP + +L + E + IPVIM+ D ISM+ C+ GA D+
Sbjct: 71 EGPSIDIVLAELDLPMANCLKMLKYITEDQELRCIPVIMLVTEDKISMIANCLRYGAVDY 130
Query: 144 LIKPVRRNELRNLWQHV 160
L+ P+ NEL NL H+
Sbjct: 131 LLTPLGINELLNLSIHM 147
>gi|162450832|ref|YP_001613199.1| sigma-54 dependent DNA-binding response regulator [Sorangium
cellulosum So ce56]
gi|161161414|emb|CAN92719.1| sigma-54 dependent DNA-binding response regulator [Sorangium
cellulosum So ce56]
Length = 481
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++L+V+ + + R+++SA L + GY V DG LK H IDLV+T++ +P + G
Sbjct: 7 QILVVDDEANLRRVLSAQLSRDGYEVHTAEDGEEGLAFLK--EHHIDLVITDLRMPKVDG 64
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
LL + D + PV++++ H ++ ++ + GA D++ KP +NE+R + + R
Sbjct: 65 MDLLRAALRDDPSR--PVVLLTAHGTVDNAVEALKTGAFDYITKPFDQNEVRVVVKKALR 122
Query: 163 RHSLLGGHVPQNLHDVYHKGGA 184
L +++ +GG+
Sbjct: 123 TRDLASADATRDVSAAQPRGGS 144
>gi|218200318|gb|EEC82745.1| hypothetical protein OsI_27456 [Oryza sativa Indica Group]
Length = 224
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 37/43 (86%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 164 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 206
>gi|225465893|ref|XP_002268352.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090344|emb|CBI40163.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 10/132 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-----KCRPH-----SIDLVLT 93
VL V+ + R++I LL+ ++V AV G A E L + R H ++L++T
Sbjct: 11 VLAVDDNLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHPQEMEVNLIIT 70
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ +P ++G+ LL + E K+IPV++MS + S + +C+ +GA DF +KPV+ +++
Sbjct: 71 DYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDV 130
Query: 154 RNLWQHVWRRHS 165
L H+ RR +
Sbjct: 131 SKLRPHLLRRKA 142
>gi|357149551|ref|XP_003575151.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 226
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 32 RWESFLPRMVLRVLLVEADDSTRQIISALL---RKCGYRVAAVPDGLAAWETLKCRPH-- 86
R E P LRVL+V+ R+I+ LL R + V V G A E L +P
Sbjct: 3 RVEGMEPEEKLRVLVVDDSPVDRKIVQLLLNNHRGSAFHVTVVDSGKKAMELLGQKPQAQ 62
Query: 87 ------SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGA 140
SID+VLT+ +P ++G+ LL + + IPV++MS + + +C+ GA
Sbjct: 63 EEQQRRSIDIVLTDYCMPEMTGYDLLKAIKALNSPNPIPVVVMSSENEPQRINRCLTAGA 122
Query: 141 ADFLIKPVRRNELRNL 156
DF++KP+R +++ L
Sbjct: 123 EDFIVKPLRTKDVQRL 138
>gi|358248966|ref|NP_001240226.1| uncharacterized protein LOC100788079 [Glycine max]
gi|255641691|gb|ACU21117.1| unknown [Glycine max]
Length = 248
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPH----------------- 86
++ DDS R++I LLR Y+V V G A E L R +
Sbjct: 12 VLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDESNPSIPSVCPNNHQP 71
Query: 87 ---SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADF 143
++LV+T+ +P ++G+ LL + E +NIPV++MS + S + +C+ +GA +F
Sbjct: 72 QEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEF 131
Query: 144 LIKPVRRNELRNLWQHVWR 162
+KPVR ++L L H+ +
Sbjct: 132 FLKPVRLSDLNKLKPHMKK 150
>gi|253702489|ref|YP_003023678.1| Fis family transcriptional regulator [Geobacter sp. M21]
gi|251777339|gb|ACT19920.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter sp. M21]
Length = 455
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M+ +L+V+ + R I++A+L K GY++ G A + L+ + DL+LT++++
Sbjct: 1 MIGSILIVDDEKGQRDILTAILTKMGYKIQTASGGEEALQQLQHK--EFDLLLTDLKMQG 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
ISG L+ V+ D + V+MM+ H +I ++ M KGA D+L KP+ R +L Q
Sbjct: 59 ISGMELMERVLADDPSQC--VVMMTAHGTIDSAVEAMKKGAFDYLEKPLEREDLILTVQR 116
Query: 160 VWRRHSLL 167
+ R LL
Sbjct: 117 AFERIGLL 124
>gi|423685678|ref|ZP_17660486.1| transcriptional regulatory protein ZraR [Vibrio fischeri SR5]
gi|371494979|gb|EHN70576.1| transcriptional regulatory protein ZraR [Vibrio fischeri SR5]
Length = 476
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+VE S + + L G+ + V G+ A E +K R + DLVL ++ LP ++GF
Sbjct: 7 LLMVEDTASVAALYRSYLNPLGFDIDVVAKGVEAIEKIKLR--TPDLVLLDLRLPDMTGF 64
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+L + + + ++IPV++M+ H SI ++ M GA DFLIKP + LR + RR
Sbjct: 65 DVLAEIRKDN--QSIPVVLMTAHGSIDAAVEAMQLGAQDFLIKPCEADRLRVTVNNALRR 122
>gi|440801589|gb|ELR22603.1| Multisensor hybrid histidine kinase, putative [Acanthamoeba
castellanii str. Neff]
Length = 1735
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LL + + R+ ++ LL Y V +V +GL A L+ P +DLVLT+V +P + G
Sbjct: 854 RILLADDNFDMREYVARLL-SAKYEVISVSNGLEAASVLRSNPQGVDLVLTDVMMPFLDG 912
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL + D + +PVIM+S + + +GA D+L KP EL
Sbjct: 913 FGLLKEIRSRDATQTLPVIMLSARAGEEASAEGLAEGADDYLTKPFTAREL 963
>gi|59711544|ref|YP_204320.1| autoinducer repressor protein LuxO [Vibrio fischeri ES114]
gi|59479645|gb|AAW85432.1| autoinducer repressor protein LuxO [Vibrio fischeri ES114]
Length = 476
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+VE S + + L G+ + V G+ A E +K R + DLVL ++ LP ++GF
Sbjct: 7 LLMVEDTASVAALYRSYLNPLGFDIDVVAKGVEAIEKIKLR--TPDLVLLDLRLPDMTGF 64
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+L + + + ++IPV++M+ H SI ++ M GA DFLIKP + LR + RR
Sbjct: 65 DVLAEIRKDN--QSIPVVLMTAHGSIDAAVEAMQLGAQDFLIKPCEADRLRVTVNNALRR 122
>gi|338530264|ref|YP_004663598.1| sigma-54 dependent DNA-binding response regulator FrgC [Myxococcus
fulvus HW-1]
gi|337256360|gb|AEI62520.1| sigma-54 dependent DNA-binding response regulator FrgC [Myxococcus
fulvus HW-1]
Length = 468
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLLV+ D + +++ ALL + G A DG A L +P +D+V+++V +P + G
Sbjct: 9 VLLVDDDPAVAKVLGALLTQAGLTTHAARDGQEALALLASKP--VDVVVSDVRMPGMDGL 66
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE-LRNLWQHVWR 162
+L V ++PVI+++ H ++ + ++ M GAADF++KP R E L + + + R
Sbjct: 67 QVLAEVSRG--WPDVPVILLTAHGTVPLAVEAMKAGAADFVLKPFDREEILFTVRKALLR 124
Query: 163 RHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAAS--------SQKNKGSEKVSDA 214
G P+ D + A+++ + ++ A+ + K ++ V DA
Sbjct: 125 AQGEAGRQQPRATGDFIGQSRAMADVQAVLAKAAAGTATVLLRGESGTGKELAAKAVHDA 184
Query: 215 QSSRTSSPYLEAESAYMQN 233
S R P+++ A + +
Sbjct: 185 -SPRRDGPFVKLHCAALPD 202
>gi|197336195|ref|YP_002155700.1| transcriptional regulatory protein ZraR [Vibrio fischeri MJ11]
gi|121308603|dbj|BAF43696.1| LuxO [Vibrio fischeri]
gi|197317685|gb|ACH67132.1| transcriptional regulatory protein ZraR [Vibrio fischeri MJ11]
Length = 476
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+VE S + + L G+ + V G+ A E +K R + DLVL ++ LP ++GF
Sbjct: 7 LLMVEDTASVAALYRSYLNPLGFDIDVVAKGVEAIEKIKLR--TPDLVLLDLRLPDMTGF 64
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+L + + + ++IPV++M+ H SI ++ M GA DFLIKP + LR + RR
Sbjct: 65 DVLAEIRKDN--QSIPVVLMTAHGSIDAAVEAMQLGAQDFLIKPCEADRLRVTVNNALRR 122
>gi|256421295|ref|YP_003121948.1| response regulator receiver protein [Chitinophaga pinensis DSM
2588]
gi|256036203|gb|ACU59747.1| response regulator receiver protein [Chitinophaga pinensis DSM
2588]
Length = 128
Score = 70.9 bits (172), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 67/114 (58%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M R+LLVE D+ +I+ +L K Y++ V +G A++ L+ ++ DL++T++ +P
Sbjct: 1 MSTRILLVEDDEVMPKIMERILHKEEYKIEHVTNGKEAFQRLEDNNYNYDLIITDIMMPY 60
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+GF +L+ V K IPVI++S + M+L+ GA DFL KPV EL
Sbjct: 61 ANGFEILSKVKTRKDGKPIPVIIVSNAGNEEMILEGFKLGADDFLKKPVIPGEL 114
>gi|253698719|ref|YP_003019908.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter sp. M21]
gi|251773569|gb|ACT16150.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter sp. M21]
Length = 357
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RV+LV+ D + ++ LL G+ V + +G A L+ P D+VLT+V +P +SG
Sbjct: 8 RVVLVDDDPYVLESVALLLSVSGFEVTSFSNGHEALALLRHSPP--DVVLTDVNMPLMSG 65
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LL + HD ++IPVI+M+ + + M + + KGA DF+IKP +
Sbjct: 66 IELLEQI--HDFDRDIPVILMTAYAELEMAVSAIKKGAFDFIIKPFK 110
>gi|428212579|ref|YP_007085723.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
gi|428000960|gb|AFY81803.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
Length = 354
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ ++ R ++ L++ GY V DGL A E ++ P DLVL ++ +P ++G+
Sbjct: 8 VLVVDDVEANRDLLCRRLKRQGYHVKIAEDGLKALELIRAEP--FDLVLLDIMMPHLNGY 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+L + ++IPVIM+S D I V+KC+ GA D+L KP
Sbjct: 66 QVLEEIKADSSLRHIPVIMISAVDDIDSVVKCIELGAEDYLSKP 109
>gi|392376048|ref|YP_003207881.1| response regulator in two-component reguatory system, sigma54
dependent transcriptional regulator [Candidatus
Methylomirabilis oxyfera]
gi|258593741|emb|CBE70082.1| putative response regulator in two-component reguatory system,
sigma54 dependent transcriptional regulator [Candidatus
Methylomirabilis oxyfera]
Length = 460
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ + R+ ++ LL K GYRV DG A E + S DLV+++V +P + G
Sbjct: 4 ILVVDDEQGIREFLTVLLEKQGYRVITASDGERALELIAH--QSPDLVISDVRMPKMDGI 61
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
LLT + + D ++PVIM++ + S+ ++ M GA D++ KP R +E+R
Sbjct: 62 GLLTGIRKTD--PHLPVIMVTAYASMDSTIQAMRLGAHDYITKPFRIDEIR 110
>gi|425456808|ref|ZP_18836514.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9807]
gi|389801999|emb|CCI18895.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9807]
Length = 1037
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL+V+ + R++++ L K GYR+ DGL AWE L+ + DL+L ++E+P ++G
Sbjct: 907 RVLIVDDSVTVREMLAISLVKAGYRIEKARDGLEAWEKLQA-GLACDLILCDIEMPRLNG 965
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
LL+ + E + + IPV M++ S M KGA + +KP + L + Q +
Sbjct: 966 LELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKPYIEDVLLSAAQRL 1023
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + +++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 752 VLIVDDSITVLELLSLSFSKAGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 806
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS-----LHDSISMVLKCMLKGAADFLIKPVRRNELR 154
++G LL + + +IPV +++ H ++ L GA+ + KP +L
Sbjct: 807 MNGLELLYNLQKDPRLASIPVALLTSRGAERHRQVAATL-----GASGYFTKPYTERDLL 861
Query: 155 NLWQHVWRRHSLLGGHV 171
+ + + LL +
Sbjct: 862 SAAERMIAGEVLLANSI 878
>gi|224713626|gb|ACN62086.1| response regulator 1 [Pinus pinea]
Length = 184
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL---------VLTE 94
VL+V+ R++I LL+ YRV AV A + L DL ++T+
Sbjct: 17 VLVVDDSVLDRKLIEKLLKISSYRVTAVDRVRKALQFLGLEDDEDDLNVDNIQVNMIITD 76
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+P ++G+ LL V E K+IPV++MS + S + +CM +GA +FL+KPV+ ++++
Sbjct: 77 YCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRISRCMSEGAEEFLLKPVQLSDVK 136
Query: 155 NLWQHVWRR 163
L H+ +
Sbjct: 137 KLRSHILNK 145
>gi|345863471|ref|ZP_08815682.1| putative histidine kinase with protein phosphatase region
[endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345125549|gb|EGW55418.1| putative histidine kinase with protein phosphatase region
[endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 576
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 38 PRMVLRVLLVEADD--STRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
P + L + ADD S R I++ALL+K GY+V DG A E K R HSID+VL +V
Sbjct: 6 PNLKLHGTALVADDELSNRVILNALLKKLGYQVIQAVDGADAVE--KFRQHSIDIVLMDV 63
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+P + G+A ++ K IPV+ ++ + +C+ G DFL KP L
Sbjct: 64 MMPVMDGYAATEIIKSETADKFIPVLFLTAMTDDKALARCIEVGGDDFLTKPYNHTVLSA 123
Query: 156 LWQHVWRRHSL 166
Q + R +L
Sbjct: 124 KIQSMERIQNL 134
>gi|404493789|ref|YP_006717895.1| sigma-54-dependent transcriptional response regulator PilR
[Pelobacter carbinolicus DSM 2380]
gi|77545822|gb|ABA89384.1| sigma-54-dependent transcriptional response regulator PilR
[Pelobacter carbinolicus DSM 2380]
Length = 492
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ ++S R+ + LL++ GY V AV DG A LK + DL+++++++P + G
Sbjct: 29 RILVVDDEESMREFLCILLKRDGYLVDAVSDGQQAVACLK--EQNYDLIISDIKMPRLDG 86
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
F LL V E + +IM++ + + M KGA D++ KP + E+R + ++
Sbjct: 87 FGLLDHVKER--FASTAMIMITAFSTAEQAVDAMKKGAYDYITKPFKNEEIRLVVENALE 144
Query: 163 RHSL 166
R L
Sbjct: 145 RMDL 148
>gi|357162610|ref|XP_003579464.1| PREDICTED: two-component response regulator ARR5-like [Brachypodium
distachyon]
Length = 163
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSI 100
L VL V+ R +I+ +LR YRV V A E L ++++++T+ +P +
Sbjct: 43 LHVLAVDDSVVDRAVIAKILRSSKYRVTTVESATRALELLGLGLITNVNMIITDYWMPGM 102
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+G+ LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ L
Sbjct: 103 TGYELLKRVKESSELKEIPVVIMSSENVPNRINRCLEEGAEDFLLKPVRPSDVSRL 158
>gi|328952706|ref|YP_004370040.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
gi|328453030|gb|AEB08859.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
Length = 449
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
LP+ + +L+V+ + S R+ +S L++ GY VA DG+AAW ++ + D++L +V
Sbjct: 1 MLPQKKISILVVDDELSIRESLSGWLQQDGYEVATAADGIAAWAMIQ--ENRYDIMLIDV 58
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
++P + G +LL + E+D + V+MM+ + SI ++ M GA D+L+KP EL
Sbjct: 59 KMPRMDGLSLLKKLRENDHTE--AVVMMTAYGSIRDAVESMRLGAYDYLLKPFELEEL 114
>gi|51948340|gb|AAU14274.1| APRR-like protein [Ostreococcus tauri]
Length = 580
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH---------SIDLV 91
LRVLL D TR ++ +LR+ G V +G E L+ RP S+D++
Sbjct: 55 ALRVLLATDDAHTRGMVHKMLRELGVEVVMATNGKEVLEVLRGRPKGVAAAAEDVSVDMI 114
Query: 92 LTEVELPSISG-FALLTLVMEHDVCKNIPVIMMSLHDSISMV-LKCMLKGAADFLIKPVR 149
L +V +P++ G L+ + ++ + +P+++MS D + GAA FL KPV
Sbjct: 115 LLDVLMPALDGEVELVEVCKSNEALRGVPIVIMSTVDERKACGTRYEHSGAAGFLTKPVN 174
Query: 150 RNELRNLWQHV 160
R EL+ H
Sbjct: 175 RTELKESLSHT 185
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 657 SARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANA 716
S++ + R AA+ +F KRK+R +DKKVRY SR+ LA RPR++GQFVR + T + +
Sbjct: 466 SSQAAEHRAAAIRRFLKKRKERNFDKKVRYASRQQLAASRPRLRGQFVRNAEETTTENGS 525
Query: 717 DGC 719
+G
Sbjct: 526 NGS 528
>gi|406596174|ref|YP_006747304.1| two-component system response regulator [Alteromonas macleodii ATCC
27126]
gi|407683118|ref|YP_006798292.1| two-component system response regulator [Alteromonas macleodii str.
'English Channel 673']
gi|407687035|ref|YP_006802208.1| two-component system response regulator [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|406373495|gb|AFS36750.1| two-component system response regulator [Alteromonas macleodii ATCC
27126]
gi|407244729|gb|AFT73915.1| two-component system response regulator [Alteromonas macleodii str.
'English Channel 673']
gi|407290415|gb|AFT94727.1| two-component system response regulator [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 446
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LLV+ D S ++++ L GY V AV DG +A K + + D+VL+++ +P + G
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYEVTAVEDGQSALR--KLQNDNYDVVLSDLRMPGLDGL 68
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+L +M + K+IPVI+M+ H +I+ + +G FL KPV +ELR L Q
Sbjct: 69 SLFEEIM--GIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRALLQ 121
>gi|86158331|ref|YP_465116.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85774842|gb|ABC81679.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter dehalogenans 2CP-C]
Length = 473
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + + R++++A+L++ GY V DG A L P + +V+T++ +P + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVLHRTP--VHVVVTDLVMPRVGGM 61
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL V + ++PVI+++ H S+ + + GA D++ KP ++EL+ + R
Sbjct: 62 ELLRRVSQD--FPDVPVILITAHGSVDSAVAALKAGAFDYITKPFEQDELKKVIAKAARA 119
Query: 164 HSLLGGHVPQNLHDVYHKG 182
H L QNLH + ++G
Sbjct: 120 HDL----ERQNLHAMLNEG 134
>gi|166366868|ref|YP_001659141.1| two-component hybrid sensor and regulator [Microcystis aeruginosa
NIES-843]
gi|166089241|dbj|BAG03949.1| two-component hybrid sensor and regulator [Microcystis aeruginosa
NIES-843]
Length = 1002
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
+F + RVL+V+ + R++++ L K GYR+ DGL AWE L+ + DL+L +
Sbjct: 864 NFFAQSTPRVLIVDDSVTAREMLAISLVKAGYRIEEARDGLEAWEKLRA-GLACDLILCD 922
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+E+P ++G LL+ + E + + IPV M++ S M KGA + +KP + L
Sbjct: 923 LEMPRLNGLELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKPYIEDVLL 982
Query: 155 NLWQHVWRRHSLLGGHVPQN 174
+ Q + L+ P +
Sbjct: 983 SAAQRLIAGEVLIQKDSPAD 1002
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + R ++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 717 VLIVDDSITVRGLLSLSFSKAGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 771
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS-----LHDSISMVLKCMLKGAADFLIKPVRRNELR 154
++G LL + + +IPV +++ H ++ L GA+ + KP +L
Sbjct: 772 MNGLELLYNLQKDPRLASIPVALLTSRGAERHRQVAATL-----GASGYFTKPYTERDLL 826
Query: 155 NLWQHVWRRHSLLGGHV 171
+ + + LL +
Sbjct: 827 SAAERMIAGEVLLANSI 843
>gi|407699472|ref|YP_006824259.1| two-component system response regulator [Alteromonas macleodii str.
'Black Sea 11']
gi|407248619|gb|AFT77804.1| two-component system response regulator [Alteromonas macleodii str.
'Black Sea 11']
Length = 446
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LLV+ D S ++++ L GY V AV DG +A K + + D+VL+++ +P + G
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYHVTAVEDGQSALR--KLQNDNYDVVLSDLRMPGLDGL 68
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+L +M + K+IPVI+M+ H +I+ + +G FL KPV +ELR L Q
Sbjct: 69 SLFEEIM--GIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRALLQ 121
>gi|425464406|ref|ZP_18843719.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9809]
gi|389833601|emb|CCI21740.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9809]
Length = 1003
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTE 94
+F + RVL+V+ + R++++ L K GYR+ DGL AWE L+ + DL+L +
Sbjct: 865 NFFAQSTPRVLIVDDSVTAREMLAISLVKAGYRIEEARDGLEAWEKLRA-GLACDLILCD 923
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+E+P ++G LL+ + E + + IPV M++ S M KGA + +KP + L
Sbjct: 924 LEMPRLNGLELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKPYIEDVLL 983
Query: 155 NLWQHVWRRHSLLGGHVPQN 174
+ Q + L+ P +
Sbjct: 984 SAAQRLIAGEVLIQKDSPAD 1003
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + R ++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 718 VLIVDDSITVRGLLSLSFSKAGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 772
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS-----LHDSISMVLKCMLKGAADFLIKPVRRNELR 154
++G LL + + +IPV +++ H ++ L GA+ + KP +L
Sbjct: 773 MNGLELLYNLQKDPRLASIPVALLTSRGAERHRQVAATL-----GASGYFTKPYTERDLL 827
Query: 155 NLWQHVWRRHSLLGGHV 171
+ + + LL +
Sbjct: 828 SAAERMIAGEVLLANSI 844
>gi|254508379|ref|ZP_05120500.1| response regulator receiver domain protein [Vibrio parahaemolyticus
16]
gi|219548692|gb|EED25696.1| response regulator receiver domain protein [Vibrio parahaemolyticus
16]
Length = 383
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Query: 17 DLETEKD---GSSEVVRTRWESFLPRM-VLRVLLVEADDS--TRQIISALLRKCGYRVAA 70
+LET KD GS + + E+ P M R ++V ADD ++II+ +L G++V
Sbjct: 232 NLETYKDNSVGSLQAFSSMLETVKPHMKSERPIVVVADDQPVMQKIIATILEPRGFKVEL 291
Query: 71 VPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSIS 130
+G+ A +K + L+L ++++P + G A L + + ++ KNIPVIM++ H S
Sbjct: 292 ASNGVEA--IMKAKVMIPQLILLDIDMPIMDGLATLQAMKQVEITKNIPVIMLTSHADKS 349
Query: 131 MVLKCMLKGAADFLIKPVRRNEL 153
M+ + GA+D+++KP R + L
Sbjct: 350 MIQASIDNGASDYVVKPTRADLL 372
>gi|425446678|ref|ZP_18826680.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9443]
gi|389732997|emb|CCI03180.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9443]
Length = 1037
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F + RVL+V+ + R++++ L K GYR+ DGL AWE L+ + DL+L ++
Sbjct: 900 FFAQSTPRVLIVDDSVTAREMLAISLVKAGYRIEKARDGLEAWEKLRA-GLACDLILCDL 958
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
E+P ++G LL+ + E + + IPV M++ S M KGA + +KP + L +
Sbjct: 959 EMPRLNGLELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKPYIEDVLLS 1018
Query: 156 LWQHVWRRHSLLGGHVP 172
Q + L+ P
Sbjct: 1019 AAQRLIAGEVLIQKDSP 1035
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + +++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 752 VLIVDDSITVLELLSLSFSKAGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 806
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS-----LHDSISMVLKCMLKGAADFLIKPVRRNELR 154
++G LL + + +IPV +++ H ++ L GA+ + KP +L
Sbjct: 807 MNGLELLYNLRKDPRLASIPVALLTSRGAERHRQVAATL-----GASGYFTKPYTERDLL 861
Query: 155 NLWQHVWRRHSLLGGHV 171
+ + + LL +
Sbjct: 862 SAAERMIAGEVLLANSI 878
>gi|322417765|ref|YP_004196988.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter sp. M18]
gi|320124152|gb|ADW11712.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter sp. M18]
Length = 357
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RV+LV+ D + ++ LL G+ V +G+ A L+ P D+VLT+V +P +SG
Sbjct: 8 RVILVDDDPYVLESVALLLSVSGFEVHPCTNGMDALGLLRQSPP--DVVLTDVNMPQMSG 65
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LL + HD ++IPVI+M+ + + M + + KGA DF+IKP +
Sbjct: 66 IDLLEQI--HDFDRDIPVILMTAYAELEMAVSAIKKGAFDFIIKPFK 110
>gi|260446968|emb|CBG76250.1| OO_Ba0005L10-OO_Ba0081K17.1 [Oryza officinalis]
Length = 151
Score = 70.1 bits (170), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWE--TLKCRPHSIDLVLTEVELPS 99
+ VL V+ R +I+ +LR YRV V A E L P ++++++T+ +P
Sbjct: 31 MHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLVP-NVNMIITDYWMPG 89
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
++G+ LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ L
Sbjct: 90 MTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRL 146
>gi|406660025|ref|ZP_11068160.1| Mycobacterial persistence regulator A [Cecembia lonarensis LW9]
gi|405556159|gb|EKB51109.1| Mycobacterial persistence regulator A [Cecembia lonarensis LW9]
Length = 349
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +++LL+E + RQ IS +L G++V +G+ E + SIDLV++++ +P
Sbjct: 1 MPIKILLIEDEQDLRQNISEMLEIEGFQVFQAINGIEGLELI--NKQSIDLVISDIMMPL 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+ G+ LL +V + N+P I +S S+ M KGA D+LIKP+ N L N
Sbjct: 59 LDGYQLLEIVRGNPSFSNLPFIFLSAKSSLKDQRLGMEKGAEDYLIKPIAFNSLLN 114
>gi|388497694|gb|AFK36913.1| unknown [Medicago truncatula]
Length = 239
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 20/137 (14%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL------KCRPHS---------- 87
++ DDS R++I LL+ Y+V V G A E L + P++
Sbjct: 11 VLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNNHQE 70
Query: 88 --IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
++LV+T+ +P ++G+ LL + E +NIPV++MS + S + +C+ +GA +F +
Sbjct: 71 VEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFL 130
Query: 146 KPVRRNELRNLWQHVWR 162
KPVR ++L L H+ +
Sbjct: 131 KPVRLSDLNRLKPHMKK 147
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
+VL+V+ D RQ+++ LL + G++V AV G A E L+ ++ L+L +V +P + G
Sbjct: 91 KVLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVLREEGNNYHLLLVDVLMPDMDG 150
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
LL + +++P+IM+S + + +C GA DFL KPV+ L+
Sbjct: 151 LQLLK-IFRQAYSEDMPIIMVSSSEDPDTINQCFQSGAEDFLQKPVQLEILK 201
>gi|145514149|ref|XP_001442985.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410346|emb|CAK75588.1| unnamed protein product [Paramecium tetraurelia]
Length = 838
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 57 ISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCK 116
I LL+ CG++V A +GL A + L + DL+L ++ +P + G LL ++ D K
Sbjct: 40 IVDLLQLCGFQVIACKNGLEARDELLKGENEFDLILLDLLMPEMGGLDLLKIIKSIDKLK 99
Query: 117 NIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLH 176
PVIMMS +V C+ GA ++L+KPV + ++L + V ++ P+N +
Sbjct: 100 ETPVIMMSGDGETDIVAACLGAGALNYLVKPVNFKQFQSLQELVKKK--------PKNRN 151
Query: 177 DVYH 180
+Y+
Sbjct: 152 VIYY 155
>gi|83592721|ref|YP_426473.1| acetoacetate metabolism regulatory protein AtoC [Rhodospirillum
rubrum ATCC 11170]
gi|386349450|ref|YP_006047698.1| acetoacetate metabolism regulatory protein AtoC [Rhodospirillum
rubrum F11]
gi|83575635|gb|ABC22186.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodospirillum rubrum ATCC 11170]
gi|346717886|gb|AEO47901.1| acetoacetate metabolism regulatory protein AtoC [Rhodospirillum
rubrum F11]
Length = 460
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ D++ RQ++SA L K G RV DGL A E R D+VL ++ +P ++G
Sbjct: 8 VLIVDDDEAIRQMLSAFLSKEGLRVVTARDGLEAIEVF--RLQRTDVVLLDIRMPRMNGL 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
++E D + VI+M+ + ++ + GA D++IKP E+R L +
Sbjct: 66 EAAKAILEMD--RGTAVILMTAFAEVCTAVQAIKDGAFDYVIKPFDLEEIRLLVRRALEI 123
Query: 164 HSLLGGHVP--QNLHDVYHKGGAISEN--------NMASSHSSDYAASSQKNKGSEKVSD 213
S+ V + L + Y G +++N +A S Q G+ K
Sbjct: 124 RSMRADIVSLRRELSERYGAEGILTDNPKMMDLRQTIAKVARSQATVLIQGESGTGKELV 183
Query: 214 AQSSRTSSP 222
A S SP
Sbjct: 184 AASVHYGSP 192
>gi|388495492|gb|AFK35812.1| unknown [Lotus japonicus]
Length = 239
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 20/137 (14%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL------KCRPHS---------- 87
++ DDS R++I LL+ Y+V V G A E L + P++
Sbjct: 12 VLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTPSISPNNHQE 71
Query: 88 --IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
++LV+T+ +P ++G+ LL + E +NIPV++MS + S + +C+ +GA +F +
Sbjct: 72 VEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFL 131
Query: 146 KPVRRNELRNLWQHVWR 162
KPVR+++L L H+ +
Sbjct: 132 KPVRQSDLVRLKSHIKK 148
>gi|162451922|ref|YP_001614289.1| hypothetical protein sce3649 [Sorangium cellulosum So ce56]
gi|161162504|emb|CAN93809.1| unnamed protein product [Sorangium cellulosum So ce56]
Length = 1029
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++LLV+AD + +++ L+K GY V DG A L+ + DLVL++ LP++ G
Sbjct: 5 QLLLVDADPRSVRVLEVSLKKAGYSVTTAKDGADALAKLEV--STPDLVLSDTRLPNVDG 62
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+AL+ + EH +IPV+ ++ SI ++ + G D+L KP+ EL
Sbjct: 63 YALVRKMKEHADWASIPVVFLTSQRSIEDKIRGLELGVEDYLTKPIFVREL 113
>gi|357164784|ref|XP_003580165.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 137
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL V+ R +I+ +LR +RV AV A E L + + +++T+ +P ++G+
Sbjct: 20 VLAVDDSSVDRAVITGILRSSKFRVTAVDSAKRALELLGSGAN-VSMIITDYWMPDMTGY 78
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
LL V E + IPV++MS + + + +C+ +GA DFL+KPVRR+++ L V
Sbjct: 79 ELLKKVKESSKLREIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRRSDVSRLCSRV 135
>gi|7650359|gb|AAF66011.1|AF228519_2 two component signal response regulator LuxO [Aliivibrio fischeri]
Length = 468
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 46 LVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFAL 105
+VE S + + L G+ + V G+ A E +K R + DLVL ++ LP ++GF +
Sbjct: 1 MVEDTASVAALYRSYLNPLGFDIDVVAKGVEAIEKIKLR--TPDLVLLDLRLPDMTGFDV 58
Query: 106 LTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
L + + + ++IPV++M+ H SI ++ M GA DFLIKP + LR + RR
Sbjct: 59 LAEIRKDN--QSIPVVLMTAHGSIDAAVEAMQLGAQDFLIKPCEADRLRGTVNNALRR 114
>gi|302804879|ref|XP_002984191.1| type A response regulator [Selaginella moellendorffii]
gi|300148040|gb|EFJ14701.1| type A response regulator [Selaginella moellendorffii]
Length = 272
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL--------KCRPHSIDLVLT 93
+ VL V+ R+++ LL+ Y+V V A E L I+L++T
Sbjct: 8 IHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINAIKINLIIT 67
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ +P ++G+ LL V E K IPV++MS + + CM +GA +F++KP+R ++
Sbjct: 68 DYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPLRVADV 127
Query: 154 RNLWQHVWR 162
+ L H+ R
Sbjct: 128 KRLRSHIQR 136
>gi|254473219|ref|ZP_05086617.1| response regulatory protein [Pseudovibrio sp. JE062]
gi|374333100|ref|YP_005083284.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Pseudovibrio sp. FO-BEG1]
gi|211957940|gb|EEA93142.1| response regulatory protein [Pseudovibrio sp. JE062]
gi|359345888|gb|AEV39262.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Pseudovibrio sp. FO-BEG1]
Length = 518
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS-IDLVLTEVELP 98
M R+L+V+ D R+++ +++ GYR + DG A E L S IDLV+ ++ +P
Sbjct: 1 MAQRILIVDDDPVQRRLLEEAVKRFGYRSKSCVDGREALEILTGSAQSEIDLVILDLMMP 60
Query: 99 SISGFALLTLVMEHDVCKN-IPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+ GF +L E KN +PVI+ + + SI V++ M GA DF++KP R L+
Sbjct: 61 EVDGFQVLKETRE---AKNAVPVIVQTANGSIETVIEAMRAGAQDFVVKPSRPERLQ 114
>gi|145353312|ref|XP_001420962.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357451|ref|XP_001422932.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581198|gb|ABO99255.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583176|gb|ABP01291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 578
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 19/147 (12%)
Query: 30 RTRWESFLPRMV-----LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCR 84
+T +S PR+ LRVLL D TR+++ ++LR+ G V A +G + L+
Sbjct: 35 KTNGKSARPRLNDAGAHLRVLLATDDAHTRKMVESMLRELGVEVVAATNGNEVLDVLRGA 94
Query: 85 PH------SIDLVLTEVELPSISG-FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCML 137
P S+D++L +V +P + G L+ ++ + +P+++MS D C
Sbjct: 95 PKSAREDTSVDMILLDVLMPELDGEVELVEACKANETLRGVPIVIMSTVDERKA---CKT 151
Query: 138 K----GAADFLIKPVRRNELRNLWQHV 160
+ GAA FL KPV R EL+ H
Sbjct: 152 RFENSGAAGFLTKPVNRIELKESLAHT 178
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 657 SARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVR 705
S++ + R AA+ +F KRK+R ++KKV Y SR+ L+E RPRV+GQF R
Sbjct: 455 SSQAAEHRAAAIRRFLKKRKERNFEKKVLYPSRQKLSESRPRVRGQFTR 503
>gi|421889783|ref|ZP_16320790.1| putative response regulator, CheY family [Ralstonia solanacearum
K60-1]
gi|378964864|emb|CCF97538.1| putative response regulator, CheY family [Ralstonia solanacearum
K60-1]
Length = 236
Score = 69.7 bits (169), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+LL+E D + I A L + G+RV AV DG+ A E L + H DLV+ ++ LP I
Sbjct: 1 MRILLIEDDRAIASGIHAGLTQAGHRVLAVHDGVFAVEHLARQSH--DLVILDLGLPGID 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL+ D ++ PV++++ DS+ + + GA D+L+KP EL Q +
Sbjct: 59 GMTLLSQYRARD--RSTPVLILTARDSLQDKVNGLNAGADDYLLKPFEMLELVARVQALL 116
Query: 162 RRHSLLGGHVPQ 173
RR G +P+
Sbjct: 117 RRRGDNGEPMPR 128
>gi|147772101|emb|CAN64552.1| hypothetical protein VITISV_007888 [Vitis vinifera]
Length = 519
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 28/90 (31%)
Query: 656 ISARHSSQRDAALTKFRLKRKDRCYDKK----------------------------VRYQ 687
+ +QR+AAL KFR KRK+RC++KK VRYQ
Sbjct: 429 VDQNQYAQREAALNKFRQKRKERCFEKKPVNVLGFDGTLCIAHAHAHAHSCTTTQQVRYQ 488
Query: 688 SRKSLAEQRPRVKGQFVRQVKNETKDANAD 717
SRK LAEQRPR++GQFVR+V ++ +AD
Sbjct: 489 SRKRLAEQRPRIRGQFVRRVFHDINSEDAD 518
>gi|449445057|ref|XP_004140290.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527697|ref|XP_004170846.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 156
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 20/144 (13%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH--------------- 86
VL V+ R++I LL+ Y V AV G A E L H
Sbjct: 10 FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAPDQNH 69
Query: 87 -----SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAA 141
++L++T+ +P +SG+ LL + E K+IPV++MS + S + +C+ +GA
Sbjct: 70 HHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAE 129
Query: 142 DFLIKPVRRNELRNLWQHVWRRHS 165
+F +KPV+ +++R L H+ + S
Sbjct: 130 EFFLKPVQLSDVRKLRPHLIKEKS 153
>gi|427416827|ref|ZP_18907010.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Leptolyngbya sp. PCC 7375]
gi|425759540|gb|EKV00393.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Leptolyngbya sp. PCC 7375]
Length = 201
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 37 LPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEV 95
P+ R+LL+E D R + + L +CGYRV + DG E ++ PH LVL ++
Sbjct: 3 FPKEQRRILLIEDDYGNRVLFADFLEQCGYRVLPLADGNNCIEIMQEFLPH---LVLLDI 59
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+LP I G L+ + H IP++++S + + + + GA D+++KP+
Sbjct: 60 KLPHIDGVTLIQAIRNHSQFHAIPILVVSGYAFQADRRRALAAGATDYMVKPI 112
>gi|333025275|ref|ZP_08453339.1| putative phosphate regulon transcriptional regulatory protein PhoB
[Streptomyces sp. Tu6071]
gi|332745127|gb|EGJ75568.1| putative phosphate regulon transcriptional regulatory protein PhoB
[Streptomyces sp. Tu6071]
Length = 265
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL VE DD R+ L + G+RV AVPDGL E+ R + D+ L +V +P + G
Sbjct: 38 RVLFVEDDDVIREATQLALERVGFRVTAVPDGLQGLESF--RAGAPDIALLDVMVPGMDG 95
Query: 103 FALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
+L + + +PVIM+S DSI +VL + GA D++ KP + L + V
Sbjct: 96 VSLCRRIRDE---STVPVIMLSARADSIDVVLG-LEAGADDYVTKPFDVSVLVARLRAVM 151
Query: 162 RRHSLLGGHVPQNLHD 177
RR GG Q + +
Sbjct: 152 RRFGHAGGGARQAVEE 167
>gi|374300705|ref|YP_005052344.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio africanus str. Walvis Bay]
gi|332553641|gb|EGJ50685.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio africanus str. Walvis Bay]
Length = 477
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + R ++ A+L G+RVA DG +A L+ P + D+VL ++ LP + G
Sbjct: 15 VLVVDDEPGHRLMVRAVLEDNGWRVAEAADGGSALRILRSGP-APDVVLLDMRLPDMDGL 73
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
A+L + E + +PV+M++ S+ ++ M KGA D+L KP +EL + W+
Sbjct: 74 AILRSLRE--LRPGLPVVMLTAFGSVGSAVEAMKKGAYDYLTKPADNDELEAVLDKAWQY 131
Query: 164 HSLL 167
LL
Sbjct: 132 GQLL 135
>gi|163846432|ref|YP_001634476.1| response regulator receiver [Chloroflexus aurantiacus J-10-fl]
gi|222524205|ref|YP_002568676.1| response regulator receiver protein [Chloroflexus sp. Y-400-fl]
gi|163667721|gb|ABY34087.1| response regulator receiver [Chloroflexus aurantiacus J-10-fl]
gi|222448084|gb|ACM52350.1| response regulator receiver protein [Chloroflexus sp. Y-400-fl]
Length = 127
Score = 69.3 bits (168), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LL+E S +L + GY+V PDGL W T R ++L +++LP++ GF
Sbjct: 6 ILLIEDSPSQALNFRLMLERAGYQVQVAPDGLTGWRT--ARTQLPRMILLDIDLPALDGF 63
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
+L+ + +NIPV+M++ D I V + + GA D+L K EL N+ +
Sbjct: 64 QVLSRLKRDQQTRNIPVVMLTHRDRIDSVQRALDLGANDYLFKDDVPYELLNVVSQI 120
>gi|379057816|ref|ZP_09848342.1| response regulator with CheY-like receiver domain-containing
protein and winged-helix DNA-binding domain-containing
protein [Serinicoccus profundi MCCC 1A05965]
Length = 224
Score = 69.3 bits (168), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+ E ++ ++I LR G+R V DG+AA E IDLV+ +V LP + GF
Sbjct: 4 ILIAEDEEGIARVIDRGLRADGHRTTIVSDGIAALEA--ASGGQIDLVVLDVGLPKMDGF 61
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+L ++ D + +PVIM + DS+ + + GA D+L KP R ELR + R+
Sbjct: 62 TVLRMLRTMD--EPVPVIMCTARDSVEDTVHGLENGAEDYLPKPFRVEELRARVKLRLRQ 119
Query: 164 HS 165
H+
Sbjct: 120 HA 121
>gi|86143810|ref|ZP_01062186.1| rteB, two-component system response regulator [Leeuwenhoekiella
blandensis MED217]
gi|85829853|gb|EAQ48315.1| rteB, two-component system response regulator [Leeuwenhoekiella
blandensis MED217]
Length = 451
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 6/115 (5%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP-HSIDLVLTEVELPSIS 101
++LL+E D + +++ L K GY V + AA E K H++DLV+T+V LP
Sbjct: 3 KILLIEDDVAFCKMLETFLSKKGYEVIS---AFAAGEAYKILANHAVDLVITDVRLPDDD 59
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
G ++L + E NIPVI+M+ + ++ ++ M +GA D++ KPVR +EL +
Sbjct: 60 GLSILKHIKED--YNNIPVILMTGYAEVNKAVEAMKEGAFDYISKPVRPDELLKI 112
>gi|300702472|ref|YP_003744072.1| response regulator, chey family [Ralstonia solanacearum CFBP2957]
gi|299070133|emb|CBJ41423.1| putative response regulator, CheY family [Ralstonia solanacearum
CFBP2957]
Length = 236
Score = 69.3 bits (168), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+LL+E D + I A L + G+RV AV DG+ A E L + H DLV+ ++ LP I
Sbjct: 1 MRILLIEDDRAIASGIHAGLTQAGHRVLAVHDGVFAVEHLARQSH--DLVILDLGLPGID 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL+ D + PV++++ DS+ + + GA D+L+KP EL Q +
Sbjct: 59 GMTLLSQYRARD--RGTPVLILTARDSLQNKVDGLNAGADDYLLKPFEMLELVARVQALL 116
Query: 162 RRHSLLGGHVPQ 173
RR G +P+
Sbjct: 117 RRRGDNGEPMPR 128
>gi|148240606|ref|YP_001225993.1| hybride histidine kinase [Synechococcus sp. WH 7803]
gi|147849145|emb|CAK24696.1| Possible hybride histidine kinase [Synechococcus sp. WH 7803]
Length = 344
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL+V+ + S R ++ A L + G+ V+ DG A ++K +P DL+L +V++P ++G
Sbjct: 112 RVLVVDDNASNRDLLVAALSRQGHVVSTAEDGEIAVSSVKEKP--FDLILLDVQMPRLNG 169
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+L + +D IPVIM+S D I +V++C+ GA D+L KP LR
Sbjct: 170 EQVLEYLKANDQFSMIPVIMISGLDDIDVVIRCIDCGADDYLPKPCNLTLLR 221
>gi|147782854|emb|CAN61302.1| hypothetical protein VITISV_003290 [Vitis vinifera]
Length = 594
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 68 VAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHD 127
V +V + A TL+ R + LV+T+V +P + GF V E N+PV+MMS D
Sbjct: 80 VVSVKNAEDALITLRTRSNFFHLVVTDVHMPKMDGFEFQKQVREE---FNLPVVMMSADD 136
Query: 128 SISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
S +L+ + GAA +++KPV ++L++LWQ+
Sbjct: 137 KESSILRGLEAGAAFYIVKPVNYDDLKDLWQY 168
>gi|108758269|ref|YP_629388.1| Fis family transcriptional regulator [Myxococcus xanthus DK 1622]
gi|6578851|gb|AAF18103.1|AF204400_3 FrgC [Myxococcus xanthus DZ2]
gi|108462149|gb|ABF87334.1| sigma-54 dependent DNA-binding response regulator FrgC [Myxococcus
xanthus DK 1622]
Length = 466
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLLV+ D + +++ ALL + G A DG A L +P +D+V+++V +P + G
Sbjct: 9 VLLVDDDPAVAKVLGALLTQAGLTTHAARDGQEALALLASKP--VDVVVSDVRMPGMDGL 66
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+L V ++PVI+++ H ++ + ++ M GAADF++KP R E+
Sbjct: 67 QVLAEVARG--WPDVPVILLTAHGTVPLAVEAMKAGAADFVLKPFDREEI 114
>gi|406917000|gb|EKD55886.1| response regulator receiver protein [uncultured bacterium]
Length = 271
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 39 RMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELP 98
R+ +L+++ D+S ++++ L+ G+ VAA +G A ET K DLV+T++ +P
Sbjct: 5 RITGNILVIDDDESILRLLTKFLKSEGHGVAAEINGSDAIETFK--KEKFDLVITDMYMP 62
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
+ G ++ + D+ +NIP+I+++ SI+ V+ + GA +++ KPV NE+R + Q
Sbjct: 63 DLDGLDIIRNI--KDINQNIPIIVLTAAGSITNVVHSLKLGAFNYMTKPVNINEVREIIQ 120
Query: 159 HVW 161
+
Sbjct: 121 KAF 123
>gi|297796971|ref|XP_002866370.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312205|gb|EFH42629.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 69.3 bits (168), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 48 EADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLT 107
E++DSTR I++ALL+ C Y V AVPD L AW L+ IDLVLTE +P SG LL+
Sbjct: 35 ESEDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEFVMPVHSGTGLLS 94
Query: 108 LVM 110
+M
Sbjct: 95 KIM 97
>gi|7770351|gb|AAF69721.1|AC016041_26 F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + +T + ++++ Y+V+ D A L H I++V+ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 104 -ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
AL ++ + D +PV++MS + V+K GA D+++KPV+ + N+WQH+ R
Sbjct: 96 QALKSITSKLD----LPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVR 151
Query: 163 RHSLLGGHV 171
+ + V
Sbjct: 152 KRLIFKPDV 160
>gi|15222067|ref|NP_175345.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194281|gb|AEE32402.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 608
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + +T + ++++ Y+V+ D A L H I++V+ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 104 -ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
AL ++ + D +PV++MS + V+K GA D+++KPV+ + N+WQH+ R
Sbjct: 96 QALKSITSKLD----LPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVR 151
Query: 163 RHSLLGGHV 171
+ + V
Sbjct: 152 KRLIFKPDV 160
>gi|386331755|ref|YP_006027924.1| transcriptional regulator [Ralstonia solanacearum Po82]
gi|334194203|gb|AEG67388.1| transcriptional regulatory protein [Ralstonia solanacearum Po82]
Length = 303
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 39 RMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELP 98
R V+R+LL+E D + I A L + G+RV AV DG+ A E L + H DLV+ ++ LP
Sbjct: 65 RHVMRILLIEDDRAIASGIHAGLTQAGHRVLAVHDGVFAAEHLARQSH--DLVILDLGLP 122
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
I G LL+ D + PV++++ DS+ + + GA D+L+KP EL Q
Sbjct: 123 GIDGMTLLSQYRARD--RGTPVLILTARDSLQDKVDGLNTGADDYLLKPFEMLELVARVQ 180
Query: 159 HVWRR 163
+ RR
Sbjct: 181 ALLRR 185
>gi|421896100|ref|ZP_16326499.1| response regulator protein [Ralstonia solanacearum MolK2]
gi|206587265|emb|CAQ17849.1| response regulator protein [Ralstonia solanacearum MolK2]
Length = 236
Score = 68.9 bits (167), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+LL+E D + I A L + G+RV AV DG+ A E L + H DLV+ ++ LP I
Sbjct: 1 MRILLIEDDRAIASGIHAGLTQAGHRVLAVHDGVFAAEHLARQSH--DLVILDLGLPGID 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL+ D + PV++++ DS+ + + GA D+L+KP EL Q +
Sbjct: 59 GMTLLSQYRARD--RGTPVLILTARDSLQDKVDGLNTGADDYLLKPFEMLELVARVQALL 116
Query: 162 RRHSLLGGHVPQ 173
RR G +P+
Sbjct: 117 RRRGDNGEPMPR 128
>gi|83749541|ref|ZP_00946528.1| Hypothetical Protein RRSL_00791 [Ralstonia solanacearum UW551]
gi|207744853|ref|YP_002261245.1| response regulator protein [Ralstonia solanacearum IPO1609]
gi|83723777|gb|EAP70968.1| Hypothetical Protein RRSL_00791 [Ralstonia solanacearum UW551]
gi|206596263|emb|CAQ63190.1| response regulator protein [Ralstonia solanacearum IPO1609]
Length = 236
Score = 68.9 bits (167), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+LL+E D + I A L + G+RV AV DG+ A E L + H DLV+ ++ LP I
Sbjct: 1 MRILLIEDDRAIASGIHAGLTQAGHRVLAVHDGVFAAEHLARQSH--DLVILDLGLPGID 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL+ D + PV++++ DS+ + + GA D+L+KP EL Q +
Sbjct: 59 GMTLLSQYRARD--RGTPVLILTARDSLQDKVDGLNTGADDYLLKPFEMLELVARVQALL 116
Query: 162 RRHSLLGGHVPQ 173
RR G +P+
Sbjct: 117 RRRGDNGEPMPR 128
>gi|388512609|gb|AFK44366.1| unknown [Lotus japonicus]
Length = 239
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 20/137 (14%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL------KCRPHS---------- 87
++ DDS R++I LL+ Y+V V G A E L + P++
Sbjct: 12 VLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTPSISPNNHQE 71
Query: 88 --IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
++LV+T+ +P ++G+ LL + E +NIPV+ MS + S + +C+ +GA +F +
Sbjct: 72 VEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVTMSSENVPSRINRCLEEGAEEFFL 131
Query: 146 KPVRRNELRNLWQHVWR 162
KPVR+++L L H+ +
Sbjct: 132 KPVRQSDLVRLKSHIKK 148
>gi|148266202|ref|YP_001232908.1| two component sigma-54 specific Fis family transcriptional
regulator [Geobacter uraniireducens Rf4]
gi|146399702|gb|ABQ28335.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter uraniireducens Rf4]
Length = 454
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ + R+I+SA+L+K GYR+ VP G A + L+ DL+LT++++ +SG
Sbjct: 5 ILIVDDEKGQREILSAILQKQGYRIVTVPGGREALKELES--AEFDLILTDLKMQGMSGM 62
Query: 104 ALLTLVMEHD--VCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
L+ ++ + C V+MM+ H ++ ++ M GA D+L KP+ R +L Q +
Sbjct: 63 ELMEKILGENNRQC----VVMMTAHGTVDSAVEAMKMGAFDYLEKPLEREDLLLTVQRAF 118
Query: 162 RRHSLL 167
+LL
Sbjct: 119 EHINLL 124
>gi|197122377|ref|YP_002134328.1| Fis family transcriptional regulator [Anaeromyxobacter sp. K]
gi|220917159|ref|YP_002492463.1| two component sigma-54 specific Fis family transcriptional
regulator [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172226|gb|ACG73199.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. K]
gi|219955013|gb|ACL65397.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter dehalogenans 2CP-1]
Length = 473
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 8/139 (5%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + + R++++A+L++ GY V DG A L P + +V+T++ +P + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVLHRTP--VHVVVTDLVMPRVGGM 61
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL V + ++PVI+++ H S+ + + GA D++ KP + EL+ + R
Sbjct: 62 ELLRRVSQD--FPDVPVILITAHGSVDSAVAALKAGAFDYITKPFEQEELKKVIAKAARA 119
Query: 164 HSLLGGHVPQNLHDVYHKG 182
H L QNLH + + G
Sbjct: 120 HDL----ERQNLHAMLNDG 134
>gi|334183176|ref|NP_001185179.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194282|gb|AEE32403.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 622
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + +T + ++++ Y+V+ D A L H I++V+ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 104 -ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
AL ++ + D +PV++MS + V+K GA D+++KPV+ + N+WQH+ R
Sbjct: 96 QALKSITSKLD----LPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVR 151
Query: 163 RHSLLGGHV 171
+ + V
Sbjct: 152 KRLIFKPDV 160
>gi|295837253|ref|ZP_06824186.1| DNA-binding response regulator [Streptomyces sp. SPB74]
gi|295826427|gb|EFG64844.1| DNA-binding response regulator [Streptomyces sp. SPB74]
Length = 237
Score = 68.9 bits (167), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL VE DD R+ L + G+RV AVPDGL E+ R + D+ L +V +P + G
Sbjct: 12 RVLFVEDDDVIREATQLALERVGFRVTAVPDGLQGLESF--RVAAPDIALLDVMVPGMDG 69
Query: 103 FALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
+L + + +PVIM+S DSI +VL + GA D++ KP + L + V
Sbjct: 70 VSLCRRIRDE---STVPVIMLSARADSIDVVLG-LEAGADDYVTKPFDVSVLVARLRAVM 125
Query: 162 RRHSLLGG 169
RR GG
Sbjct: 126 RRFGHAGG 133
>gi|254424941|ref|ZP_05038659.1| response regulator receiver domain protein [Synechococcus sp. PCC
7335]
gi|196192430|gb|EDX87394.1| response regulator receiver domain protein [Synechococcus sp. PCC
7335]
Length = 216
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+ + + S R ++ L GY VA DG A E LK P DL+L ++++P ++G
Sbjct: 6 ILVADDEKSIRLTVAQALSSQGYEVATAIDGSTALEQLKETP--TDLLLLDIQMPGMTGI 63
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+L + ++ V+M+S H S+ ++ M GA D+L KP +ELR L V R
Sbjct: 64 EVLQKAITQQ--PSLKVVMVSAHGSVDNAVEAMKLGAVDYLQKPFTPSELRELVNRVLER 121
Query: 164 HS 165
+
Sbjct: 122 ET 123
>gi|144897344|emb|CAM74208.1| Stage II sporulation E [Magnetospirillum gryphiswaldense MSR-1]
Length = 570
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R L+V+ + R++I A LR G+ DG+ AW L+ P S D++L + +P ++G
Sbjct: 7 RALVVDDERMNREVIVANLRAAGFETVMAEDGVQAWGILQAHPGSFDVILLDRRMPRMNG 66
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
LLT + D +IPVIM + + V + + GA +L KP+ R L
Sbjct: 67 MELLTRLKADDKLAHIPVIMQTAYAETEDVSEGIKAGAYYYLAKPLDRRLL 117
>gi|309778203|ref|ZP_07673136.1| DNA-binding response regulator VncR [Erysipelotrichaceae bacterium
3_1_53]
gi|308914037|gb|EFP59844.1| DNA-binding response regulator VncR [Erysipelotrichaceae bacterium
3_1_53]
Length = 221
Score = 68.9 bits (167), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
MV R+LLVE ++ TR+ +S L + GY V DG A + L R + D+V+ ++ LP
Sbjct: 1 MVKRILLVEDEEDTREAVSEFLSEAGYHVDTARDGEIAMKLL--RNNIYDMVVLDIMLPK 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS-LHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
++GF +L + +H IPV+M++ +HD + ++ + A D++IKP L+ +
Sbjct: 59 VNGFVVLNWLRKH---SQIPVLMLTAMHDEYTQLMS-FDEQADDYIIKPFSLRLLQKRME 114
Query: 159 HVWRR 163
++RR
Sbjct: 115 ALFRR 119
>gi|109631200|gb|ABG35776.1| SRR380 [Striga asiatica]
Length = 432
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 97 LPSISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+P + GF LL V +E D +PVIM+S + +V+K + GA D+L+KPVR ELRN
Sbjct: 1 MPDMDGFKLLEQVGLEMD----LPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRN 56
Query: 156 LWQHVWRRHSLL 167
+WQHV RR +
Sbjct: 57 IWQHVIRRKKFV 68
>gi|333916552|ref|YP_004490284.1| CheA signal transduction histidine kinase [Delftia sp. Cs1-4]
gi|333746752|gb|AEF91929.1| CheA signal transduction histidine kinase [Delftia sp. Cs1-4]
Length = 2140
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 18/148 (12%)
Query: 38 PRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLVLTEVE 96
P V VL+V+ + R++ LL++ GYRVA DGL A E L + RP LVL+++E
Sbjct: 1989 PASVPLVLVVDDSITVRRVTQRLLQREGYRVALAADGLQAMERLAEERPT---LVLSDIE 2045
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK--GAADFLIKPVRRNELR 154
+P + GF LL + + +++PV+M++ I+ + M + GA +L KP EL
Sbjct: 2046 MPRMDGFDLLRNIRADEALRDLPVVMIT--SRIAQKHREMARQLGANHYLGKPYSDEELL 2103
Query: 155 NLWQHVWRRHSLLGGHV------PQNLH 176
L QH +SL GG + PQ+L
Sbjct: 2104 GLIQH----YSLQGGSISGGPLAPQSLQ 2127
>gi|153004813|ref|YP_001379138.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter sp. Fw109-5]
gi|152028386|gb|ABS26154.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. Fw109-5]
Length = 470
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 8/139 (5%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + + R++++A+L++ GY V DG A L P + +V+T++ +P + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVLHKTP--VHVVVTDLVMPKVGGM 61
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL V ++PVIM++ H S+ + + GA D++ KP ++EL+ + R
Sbjct: 62 ELLRRVGAD--FPDVPVIMITAHGSVDSAVGALKAGAFDYITKPFEQDELKKVIAKAARA 119
Query: 164 HSLLGGHVPQNLHDVYHKG 182
H L QN+H + +G
Sbjct: 120 HDL----ERQNVHSSFGEG 134
>gi|309791654|ref|ZP_07686146.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG-6]
gi|308226276|gb|EFO80012.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG6]
Length = 848
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LLV+ +D R+++S L + Y+V V DG A + L HS DLVL ++ +P + G+
Sbjct: 168 LLLVDDNDMNREMLSRRLERMDYQVTQVNDGYPALDALHS--HSFDLVLLDIMMPGLDGY 225
Query: 104 ALLTLVMEHDV-CKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
A+L M DV +++PVI++S D I+ V++ + GA D+L KP
Sbjct: 226 AVLR-AMRDDVDLRHVPVIVLSALDDIASVVQAIELGADDYLPKP 269
>gi|256378007|ref|YP_003101667.1| multi-sensor signal transduction histidine kinase [Actinosynnema
mirum DSM 43827]
gi|255922310|gb|ACU37821.1| multi-sensor signal transduction histidine kinase [Actinosynnema
mirum DSM 43827]
Length = 1370
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 18/176 (10%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
ES LP RV++ + + R+ ++ LLR GYRV AV DG AA E ++ R + DLV+T
Sbjct: 603 ESALPA---RVVVADDNADMREYLTRLLRSAGYRVRAVADGRAALEEVRAR--TPDLVVT 657
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP------ 147
+V +P + G L+ + +PV+++S ++ + GA D+L+KP
Sbjct: 658 DVMMPRLDGLGLVAALRADQRTAGVPVVLLSARAGQEASIEGLAAGADDYLVKPFAAADL 717
Query: 148 ---VRRN-ELRNLWQHVWR-RHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDY 198
VR N EL L H R R +LL Q V + GA+ E N A + Y
Sbjct: 718 LARVRANVELARLRDHHARWRAALLDSL--QEAFFVCDETGAVVEINAAFTTVLGY 771
>gi|255558348|ref|XP_002520201.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223540693|gb|EEF42256.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 258
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 16/164 (9%)
Query: 44 VLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL--------KCRPHSIDLVLT 93
V ++ DDS R++I LL+ +V AV G A + L + +DL++T
Sbjct: 29 VHVLAVDDSLVDRKVIERLLKITSCKVTAVDSGRRALQFLGLDEEKSTSIQGLKVDLIIT 88
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ +P ++G+ LL + E + IPV++MS + ++ + +C+ +GA DFL+KPV+ +++
Sbjct: 89 DYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVMARIDRCLEEGAEDFLVKPVKLSDV 148
Query: 154 RNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSD 197
+ + ++ R L Q H+ + G NN+ S D
Sbjct: 149 KRIRDYMTARELKLKSQ--QTSHNFNNSTG----NNVNKRKSRD 186
>gi|255573419|ref|XP_002527635.1| transcription factor, putative [Ricinus communis]
gi|223532940|gb|EEF34706.1| transcription factor, putative [Ricinus communis]
Length = 478
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+ F P+ LRVLL+E D + + I + L Y V+ + A + +P S + +
Sbjct: 11 WKDF-PKG-LRVLLLEEDSISAEEIKSKLEAMDYIVSLFCNENEALSAISDKPESFHVAI 68
Query: 93 TEVELPSISG-FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
EV + +G F L + K++P IM S +S ++KC+ GA +FL KP+
Sbjct: 69 VEVSTSNSNGNFKFL------ETAKDLPTIMTSNIHCLSTMMKCIALGAVEFLRKPLSEE 122
Query: 152 ELRNLWQHVWRRHSLLGGHV 171
+LRN+WQHV + GG+V
Sbjct: 123 KLRNIWQHVVHKAFNAGGNV 142
>gi|326531500|dbj|BAJ97754.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 68.9 bits (167), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSI 100
L VL V+ R +I+ +LR YRV V A E L +++++T+ +P +
Sbjct: 53 LHVLAVDDSVVDRAVIAKILRSSKYRVTTVDSATRALELLGLGLITDVNMIITDYWMPGM 112
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+G+ LL V E + IPV++MS + + + +C+ +GA DFL+KPVR +++ L
Sbjct: 113 TGYELLKRVKESSELREIPVVIMSSENVPNRITRCLEEGAEDFLLKPVRPSDVSRL 168
>gi|168809253|gb|ACA29383.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809255|gb|ACA29384.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809257|gb|ACA29385.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809259|gb|ACA29386.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809261|gb|ACA29387.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809263|gb|ACA29388.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809265|gb|ACA29389.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809267|gb|ACA29390.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809269|gb|ACA29391.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809273|gb|ACA29393.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809275|gb|ACA29394.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809277|gb|ACA29395.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809279|gb|ACA29396.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809281|gb|ACA29397.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809283|gb|ACA29398.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809285|gb|ACA29399.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809287|gb|ACA29400.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809289|gb|ACA29401.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809291|gb|ACA29402.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809293|gb|ACA29403.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809297|gb|ACA29405.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809299|gb|ACA29406.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809303|gb|ACA29408.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+ QFVRQ
Sbjct: 323 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 366
>gi|374577657|ref|ZP_09650753.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. WSM471]
gi|374425978|gb|EHR05511.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. WSM471]
Length = 497
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +L+ + D R+++ +++KCGY V G AA L +ID V+ ++ +P
Sbjct: 1 MAASILIADDDAVARRLVENMVQKCGYETIVVDSGDAAIAALTAPDAAIDGVILDLVMPG 60
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+ G +L + E + +IPVI+ + H I V+ M GAADF++KPV
Sbjct: 61 LDGMGVLAKIREAGL--SIPVIVQTAHGGIDNVISAMRAGAADFVVKPV 107
>gi|154496221|ref|ZP_02034917.1| hypothetical protein BACCAP_00506 [Bacteroides capillosus ATCC
29799]
gi|150274304|gb|EDN01381.1| response regulator receiver domain protein [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 230
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M R+L+V+ +D R +++ R GY +A DG AA E +CR +DLV+ ++ LP
Sbjct: 1 MAERILIVDDEDKMRSLVAKHARHAGYEIAECADGHAAVE--RCREGGVDLVILDIMLPG 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ G+ L + ++PV+M+S+H ++ G DF++KP EL
Sbjct: 59 LDGYEALRAIRTF---SDVPVLMLSVHGEEQDKVRGFKLGVDDFMVKPFSPREL 109
>gi|167947561|ref|ZP_02534635.1| response regulator receiver protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 300
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 49 ADD--STRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALL 106
ADD S R I++ALL+K GY+V DG A E K R HSID+VL +V +P + G+A
Sbjct: 21 ADDELSNRVILNALLKKLGYQVIQAVDGADAVE--KFRQHSIDIVLMDVMMPVMDGYAAT 78
Query: 107 TLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSL 166
++ K IPV+ ++ + +C+ G DFL KP L Q + R +L
Sbjct: 79 EIIKSETADKFIPVLFLTAMTDDKALARCIEVGGDDFLTKPYNHTVLSAKIQSMERIQNL 138
>gi|302521034|ref|ZP_07273376.1| phosphate regulon transcriptional regulatory protein PhoB
[Streptomyces sp. SPB78]
gi|302429929|gb|EFL01745.1| phosphate regulon transcriptional regulatory protein PhoB
[Streptomyces sp. SPB78]
Length = 264
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL VE DD R+ L + G+RV AVPDGL E+ R + D+ L +V +P + G
Sbjct: 38 RVLFVEDDDVIREATQLALERVGFRVTAVPDGLQGLESF--RAGAPDIALLDVMVPGMDG 95
Query: 103 FALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
+L + + +PVIM+S DSI +VL + GA D++ KP + L + V
Sbjct: 96 VSLCRRIRDE---STVPVIMLSARADSIDVVL-GLEAGADDYVTKPFDVSVLVARLRAVM 151
Query: 162 RRHSLLGGHVPQNLHD 177
RR GG Q + +
Sbjct: 152 RRFGHAGGGARQAVEE 167
>gi|434395233|ref|YP_007130180.1| multi-sensor hybrid histidine kinase [Gloeocapsa sp. PCC 7428]
gi|428267074|gb|AFZ33020.1| multi-sensor hybrid histidine kinase [Gloeocapsa sp. PCC 7428]
Length = 1674
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTE 94
LP +LLV+ + R + LL + Y+V AV DG+AA E ++ RP DLVLT+
Sbjct: 632 LLPTASAHILLVDDNADMRDYVKRLLSQ-QYQVKAVADGIAALEAIRQQRP---DLVLTD 687
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
V +P + GF LL + + + IP+I++S ++ + GA D+LIKP EL
Sbjct: 688 VMMPRLDGFGLLRELRTDPITREIPIILLSARAGEESCVEGLAAGADDYLIKPFSAREL 746
>gi|78356619|ref|YP_388068.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
gi|78219024|gb|ABB38373.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
Length = 123
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 64/114 (56%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +L+V+ + R +++ +++K G+RV DGL E L ++DL++++V +P
Sbjct: 1 MSKHILIVDDSKTVRNLVAFIMKKEGFRVTMAEDGLDGLEKLYSAEETVDLIISDVNMPR 60
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ GF + V E D +++P++++S + M GA +++KP + +++
Sbjct: 61 MDGFTFIKTVREQDTYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQPDKM 114
>gi|300689792|ref|YP_003750787.1| response regulator, cheY family [Ralstonia solanacearum PSI07]
gi|299076852|emb|CBJ49465.1| putative response regulator, CheY family [Ralstonia solanacearum
PSI07]
gi|344168418|emb|CCA80701.1| putative response regulator, CheY family [blood disease bacterium
R229]
Length = 236
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+LL+E D + I A L + G+RV AV DG+ A E L + H DLV+ ++ LP I
Sbjct: 1 MRILLIEDDRAIASGIHAGLTQVGHRVLAVHDGVFAVEHLARQSH--DLVILDLGLPGID 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL+ D ++ PV++++ DS+ + + GA D+L+KP EL Q +
Sbjct: 59 GMTLLSQYRARD--RSTPVLILTARDSLQDKVGGLNAGADDYLLKPFEMLELVARVQALL 116
Query: 162 RRHSLLGGHVPQ 173
RR G +P+
Sbjct: 117 RRRGDNGEPMPR 128
>gi|386398077|ref|ZP_10082855.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. WSM1253]
gi|385738703|gb|EIG58899.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. WSM1253]
Length = 497
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +L+ + D R+++ +++KCGY V G AA L +ID V+ ++ +P
Sbjct: 1 MAASILIADDDAVARRLVENMVQKCGYETIVVDSGDAAIAALTAPDAAIDGVILDLVMPG 60
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+ G +L + E + +IPVI+ + H I V+ M GAADF++KPV
Sbjct: 61 LDGMGVLAKIREAGL--SIPVIVQTAHGGIDNVISAMRAGAADFVVKPV 107
>gi|162459124|ref|NP_001104856.1| response regulator 5 [Zea mays]
gi|12060386|dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS------------- 87
R ++ DDS R++I LL+ Y+V V G A E L R S
Sbjct: 9 RFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEID 68
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL V K+IPV++MS + + + +C+ GA +F +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKP 128
Query: 148 VRRNELRNLWQHVWRR 163
V+ +++ L H+ +R
Sbjct: 129 VKLADMKKLKSHLLKR 144
>gi|225465891|ref|XP_002267932.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 146
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 12/134 (8%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKC-----RPH-----SIDLVLT 93
++ DDS R++I LL+ ++V AV G A E L R H ++L++T
Sbjct: 11 VLAVDDSLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHPQETEVNLIIT 70
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ +P ++G+ LL + E K+IPV++MS + S + +C+ +GA DF +KPV+ +++
Sbjct: 71 DYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDV 130
Query: 154 RNLWQHVWRRHSLL 167
L H+ +LL
Sbjct: 131 NKLRPHLLGSRTLL 144
>gi|373957995|ref|ZP_09617955.1| two component transcriptional regulator, winged helix family
[Mucilaginibacter paludis DSM 18603]
gi|373894595|gb|EHQ30492.1| two component transcriptional regulator, winged helix family
[Mucilaginibacter paludis DSM 18603]
Length = 228
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+ VLLVE + + +I L G+ ++ DGL A + H DLV+ +V LPS+
Sbjct: 1 MAVLLVEDEPNIVSVIKRGLADFGFEISVATDGLTALQM--TIDHQFDLVILDVMLPSMD 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G L + E D +NIP++M++ DS ++ + GA D+++KP + EL + +
Sbjct: 59 GIQLCKHIRERD--ENIPILMLTALDSTENIVTGLNSGADDYMVKPFKMIELATRLKTLL 116
Query: 162 RRHSLLGGHVPQNLHDVY 179
RR GG+ Q ++Y
Sbjct: 117 RR---AGGNSIQQPKNIY 131
>gi|114778037|ref|ZP_01452937.1| type IV pilus biogenesis protein PilB [Mariprofundus ferrooxydans
PV-1]
gi|114551643|gb|EAU54196.1| type IV pilus biogenesis protein PilB [Mariprofundus ferrooxydans
PV-1]
Length = 732
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLVLTEVELPSISG 102
VL+V+ S R ++ +L GY+V DG AW+ L + +P LVLT+ E+P+++G
Sbjct: 604 VLVVDDSSSVRNLVEFVLDADGYKVLQAEDGQQAWDMLQRMKP---SLVLTDCEMPNMTG 660
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV-------RRNELRN 155
LL + E D ++PVI+++ S ++ + GAAD++ KPV R + +
Sbjct: 661 MELLKQMREQDRFDDVPVILLTARRSEEDEVQGLKAGAADYIGKPVEPLKLQARVRKTLS 720
Query: 156 LWQHVWRR 163
L++H++ R
Sbjct: 721 LYEHIYHR 728
>gi|162454291|ref|YP_001616658.1| response regulator [Sorangium cellulosum So ce56]
gi|161164873|emb|CAN96178.1| response regulator [Sorangium cellulosum So ce56]
Length = 464
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL+V+ + S R + LLR+ GY V A DG+ A E RP D+V+T++++P + G
Sbjct: 10 RVLVVDDEASARSGLEKLLRQEGYTVDAAADGVEAVEVAAERPP--DVVITDLKMPRMDG 67
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
ALL + E D +PVI+++ ++ + M GA D+L KPV + L +
Sbjct: 68 VALLGKLREQDPA--LPVIVVTAFGDVTSAVLAMRAGAEDYLTKPVDFDALLLTLERALE 125
Query: 163 RHSL 166
R +L
Sbjct: 126 RSAL 129
>gi|339715535|gb|AEJ88044.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715537|gb|AEJ88045.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715539|gb|AEJ88046.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715541|gb|AEJ88047.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715543|gb|AEJ88048.1| Ppd-D1 [Aegilops tauschii subsp. strangulata]
gi|339715545|gb|AEJ88049.1| Ppd-D1 [Aegilops tauschii subsp. strangulata]
gi|339715547|gb|AEJ88050.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715549|gb|AEJ88051.1| Ppd-D1 [Aegilops tauschii]
gi|339715551|gb|AEJ88052.1| Ppd-D1 [Aegilops tauschii subsp. strangulata]
Length = 59
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 663 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 7 RRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 50
>gi|162452548|ref|YP_001614915.1| nitrogen regulation protein NR(I) [Sorangium cellulosum So ce56]
gi|161163130|emb|CAN94435.1| Nitrogen regulation protein NR(I) [Sorangium cellulosum So ce56]
Length = 493
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 37 LPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
+P+ RVL+V+ + RQ++ + GY V P AA E ++ P LVLT++
Sbjct: 8 IPQNATRVLVVDDEPGLRQVLHIAFHRQGYEVVVAPGARAAIEAIRQNPQPFPLVLTDLV 67
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+P SG +LT VI+M+ H ++ L M GA DF+ KP EL L
Sbjct: 68 MPDGSGIEVLTAAKARSNATE--VIVMTAHSTVESALDAMRHGAYDFVTKPFSPAELTAL 125
Query: 157 WQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAA---------------S 201
+ S++ + Q L + S + +S + A +
Sbjct: 126 AAKALEKSSIVAEN--QRLRAQLERLDLPSREPLGTSAAMQRIAELIAKIAPTRTTVLLT 183
Query: 202 SQKNKGSEKVSDA---QSSRTSSPYL 224
+ G E+V+ A QS R + P+L
Sbjct: 184 GESGTGKERVARAIHDQSDRAARPFL 209
>gi|46981318|gb|AAT07636.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038102|gb|AAT93905.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215769096|dbj|BAH01325.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 620
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS-IDLVLTEVELPSI 100
L VL+V+ D + + + +L GY V A + + P +V+T+V + +
Sbjct: 23 LHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHIVMTDVHMSGM 82
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL H + +PVIM S + + MV++ ++ GA D+++KP+ ++ +W+HV
Sbjct: 83 DGFDLL-----HRINGRVPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHV 137
Query: 161 --WRRHSL 166
WR +L
Sbjct: 138 LRWRLSAL 145
>gi|226532164|ref|NP_001149868.1| RR4 - Corn type-A response regulator [Zea mays]
gi|195635163|gb|ACG37050.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 236
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS------------- 87
R ++ DDS R++I LL+ Y+V V G A E L R S
Sbjct: 9 RFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEID 68
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL V K+IPV++MS + + + +C+ GA +F +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKP 128
Query: 148 VRRNELRNLWQHVWRR 163
V+ +++ L H+ +R
Sbjct: 129 VKLADMKKLKSHLLKR 144
>gi|13173408|gb|AAK14395.1|AF339732_1 response regulator protein [Dianthus caryophyllus]
Length = 264
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 11/130 (8%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPH---------SIDLVLTE 94
++ DDS R++I LL+ +V V G+ A E L IDL++T+
Sbjct: 37 VLAVDDSLIDRKVIERLLKTTSCKVTVVDSGMRALEFLGLDAEQRTSVVDGLKIDLIITD 96
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+P ++G+ LL + E K PV++MS + I+ + +C+ +GA DF++KPV+ ++++
Sbjct: 97 YCMPGMTGYELLKKIKESSTFKETPVVIMSSENVIARIDRCLEEGAEDFILKPVKLSDVK 156
Query: 155 NLWQHVWRRH 164
L ++ ++
Sbjct: 157 RLRDYMTNKY 166
>gi|310780087|ref|YP_003968419.1| response regulator receiver protein [Ilyobacter polytropus DSM
2926]
gi|309749410|gb|ADO84071.1| response regulator receiver protein [Ilyobacter polytropus DSM
2926]
Length = 401
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELP 98
M ++VLLVE D R+ + ++ K GY V A DGL E K RP D+V+T+V++P
Sbjct: 1 MNIKVLLVEDDKMARKRLKRVIEKEGYEVIAAQDGLEGLELFKSERP---DVVITDVKMP 57
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
I G ++ + E + K VI+++ H I M + + GA D++ KP+ ++L
Sbjct: 58 KIDGIEVMHRIKE--MSKTTEVILITGHGDIDMAIVALRDGALDYIKKPIDIDQL 110
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L++E D+ TR+ + + K GY+V PDG + + ID++LT++ +P ++G
Sbjct: 133 ILILEDDEKTREKLGKIYIKEGYKVFTAPDGERGLKIFS--ENKIDILLTDLRMPIMNGL 190
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
++ V + + I++S + ++ M GA +F+ KP+ +L
Sbjct: 191 QFISEV--KKISSDCEFIVLSGFGDEADAVEAMRNGAINFISKPIDLEQL 238
>gi|414880045|tpg|DAA57176.1| TPA: hypothetical protein ZEAMMB73_006515 [Zea mays]
Length = 387
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 122 MMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLG 168
+MS D +S+V+KC+ GAA++L+KP+R NEL NLW HVWRR +LG
Sbjct: 22 VMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRRRMLG 68
>gi|383762355|ref|YP_005441337.1| putative two-component response regulator [Caldilinea aerophila DSM
14535 = NBRC 104270]
gi|381382623|dbj|BAL99439.1| putative two-component response regulator [Caldilinea aerophila DSM
14535 = NBRC 104270]
Length = 380
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+VE D S R IS L GYRV+ DG +A + P ++DL+L +V+LP ++GF
Sbjct: 5 ILVVEDDSSLRDWISFELSYDGYRVSEAADGDSALALMDAAP-ALDLILLDVQLPGMNGF 63
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR- 162
L + + +PVI ++ S+ L GA D+L KP + EL+ Q + R
Sbjct: 64 QLCEHIQKLPQMAAVPVIFLTARASLDDKLNGFAAGAVDYLTKPFKMVELKARIQALLRA 123
Query: 163 --RHSLLG 168
R L+G
Sbjct: 124 KERQRLIG 131
>gi|318076622|ref|ZP_07983954.1| two-component system response regulator [Streptomyces sp. SA3_actF]
Length = 266
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL VE DD R+ L + G+RV AVPDGL E+ R + D+ L +V +P + G
Sbjct: 38 RVLFVEDDDVIREATQLALERVGFRVTAVPDGLQGLESF--RAGAPDIALLDVMVPGMDG 95
Query: 103 FALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
+L + + +PVIM+S DSI +VL + GA D++ KP + L + V
Sbjct: 96 VSLCRRIRDE---STVPVIMLSARADSIDVVLG-LEAGADDYVTKPFDVSVLVARLRAVM 151
Query: 162 RRHSLLGGHVPQ 173
RR GG Q
Sbjct: 152 RRFGHAGGGARQ 163
>gi|326319281|ref|YP_004236953.1| winged helix family two component transcriptional regulator
[Acidovorax avenae subsp. avenae ATCC 19860]
gi|323376117|gb|ADX48386.1| two component transcriptional regulator, winged helix family
[Acidovorax avenae subsp. avenae ATCC 19860]
Length = 248
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ D R+++ LR G R AAV DG A W+ L H+ DLV+ ++ LP G
Sbjct: 11 RILVVDDDPEIRELLCDYLRAAGLRPAAVADGEAMWQWLA--RHTADLVVLDLMLPGTDG 68
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
AL + E C +IPV+M++ ++ + + GA D+L KP EL V R
Sbjct: 69 LALCRALRE---CTHIPVVMLTARGALLDRILGLEMGADDYLPKPFDPRELLARINVVLR 125
Query: 163 RHSLLGGHVPQNLHD 177
R VP +LH+
Sbjct: 126 R----ARQVPAHLHE 136
>gi|160897023|ref|YP_001562605.1| CheA signal transduction histidine kinase [Delftia acidovorans SPH-1]
gi|160362607|gb|ABX34220.1| CheA signal transduction histidine kinase [Delftia acidovorans SPH-1]
Length = 2137
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
Query: 38 PRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLVLTEVE 96
P V VL+V+ + R++ LL++ GYRVA DGL A E L + RP LVL+++E
Sbjct: 1983 PASVPLVLVVDDSITVRRVTQRLLQREGYRVALAADGLQAMERLAEERPT---LVLSDIE 2039
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK--GAADFLIKPVRRNELR 154
+P + GF LL + + +++PV+M++ I+ + M + GA +L KP EL
Sbjct: 2040 MPRMDGFDLLRNIRADEALRDLPVVMIT--SRIAQKHREMARQLGANHYLGKPYSDEELL 2097
Query: 155 NLWQHVWRRHSLLGGHV 171
L QH +SL GG +
Sbjct: 2098 GLIQH----YSLQGGSI 2110
>gi|113477434|ref|YP_723495.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110168482|gb|ABG53022.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 351
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + R +++ +++ G+ +++ DG A E + R HS DLVL ++ +P ++G+
Sbjct: 8 VLVVDDNQFNRDLLARRVKRQGHMISSASDGFQALEMV--RNHSFDLVLLDIMMPQMNGY 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+L + ++IPVIM+S D I +++C+ GA D+L KP
Sbjct: 66 QVLETLKADPALRHIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|134299175|ref|YP_001112671.1| two component sigma-54 specific Fis family transcriptional
regulator [Desulfotomaculum reducens MI-1]
gi|134051875|gb|ABO49846.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfotomaculum reducens MI-1]
Length = 455
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLVLTEVELPSIS 101
RVL+V+ ++S RQ + +L + Y+VA +GL + L + +P D+++T++ +P
Sbjct: 5 RVLVVDDEESVRQFLYDVLTEEKYQVATAANGLQCQDKLMQFKP---DVLITDIRMPEKD 61
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL + + NIPVI+M+ + + +K M GA D+++KP +E +L Q
Sbjct: 62 GFGLLEQIKSAGL--NIPVILMTAFGTTEVAIKAMKLGAFDYIVKPFDLDEFLDLIQRAV 119
Query: 162 RRHSLLGGHVPQ-----------------NLHDVYHKGGAISENNMASSHSSDYAASSQK 204
+ + PQ ++ +VY G ++++N + +
Sbjct: 120 AQSDTVATF-PQAQEPASSTGINIIGNSPSMRNVYKDIGRVADSN------ATVLIQGES 172
Query: 205 NKGSEKVSDA---QSSRTSSPYLEAESA 229
G E V+ A SSR ++P+++ A
Sbjct: 173 GTGKELVARAIHYNSSRRNNPFIKVNCA 200
>gi|188583284|ref|YP_001926729.1| transcriptional regulator [Methylobacterium populi BJ001]
gi|418057818|ref|ZP_12695803.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens DSM 13060]
gi|179346782|gb|ACB82194.1| two component transcriptional regulator, winged helix family
[Methylobacterium populi BJ001]
gi|373568634|gb|EHP94578.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens DSM 13060]
Length = 253
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LL+E DD R +++ LLR+ GYRV G W L + S+DLVL +V LP SGF
Sbjct: 21 ILLIEDDDGMRVLVTRLLRESGYRVTGCRSGAEMWSLLPGK--SVDLVLLDVMLPGASGF 78
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL + +PVIM+S + + + + GA D++ KP R EL + V RR
Sbjct: 79 DLLRALRSKG---TVPVIMLSARNEEADRVLGLELGADDYVAKPFGRPELLARIRAVLRR 135
>gi|16124842|ref|NP_419406.1| chemotaxis protein CheY [Caulobacter crescentus CB15]
gi|221233562|ref|YP_002515998.1| two-component receiver domain-containing protein [Caulobacter
crescentus NA1000]
gi|13421788|gb|AAK22574.1| chemotaxis protein CheYI [Caulobacter crescentus CB15]
gi|220962734|gb|ACL94090.1| two-component receiver domain protein [Caulobacter crescentus
NA1000]
Length = 125
Score = 68.2 bits (165), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPSI 100
+R+LLVE D++ R +++ +L GY V+ DG AA + L PH++ + ++ +P +
Sbjct: 4 MRILLVEDDEAIRDLVTGVLEGAGYEVSTAADGQAALDMLPGVAPHAM---VVDINMPGM 60
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR-RNELRNLWQH 159
G ALL V IP +M++ S + + M GAADF+ KP R LR L +
Sbjct: 61 DGLALLHAVRRDPAFAEIPALMLTAQTSPEDIRRSMSLGAADFIGKPFEARVLLRRLERM 120
Query: 160 V 160
V
Sbjct: 121 V 121
>gi|386827615|ref|ZP_10114722.1| family 3 adenylate cyclase [Beggiatoa alba B18LD]
gi|386428499|gb|EIJ42327.1| family 3 adenylate cyclase [Beggiatoa alba B18LD]
Length = 545
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 23/161 (14%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ +S R ++S L + G+ V +GL A + K + + DLVL ++ +P ++G
Sbjct: 201 RLLVVDDKESNRDLLSRRLDRQGFHVDIAENGLQALQ--KVQAYRYDLVLLDIIMPEMNG 258
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP-------------VR 149
F +L + +++PVIM+S D I V+ C+ GA D+L KP +
Sbjct: 259 FQVLAAIKSDPALRHLPVIMISALDEIDSVVHCIELGAEDYLQKPFNQVILNAKISATLE 318
Query: 150 RNELRNLWQHVW--------RRHSLLGGHVPQNLHDVYHKG 182
R LR++ Q + LL +P+ + D+ +G
Sbjct: 319 RKRLRDMEQAYLEQIQREQEKSEKLLLNILPKPIADLLKRG 359
>gi|119944994|ref|YP_942674.1| Fis family two component sigma-54 specific transcriptional
regulator protein [Psychromonas ingrahamii 37]
gi|119863598|gb|ABM03075.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Psychromonas ingrahamii 37]
Length = 472
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 15/191 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ D ++S L+++ GY V V DG+AA E ++ R D++LT++ +P + GF
Sbjct: 15 VLIVDDDPDICSLLSYLMKREGYVVEIVHDGMAALELMRNRVP--DIILTDLRMPRMDGF 72
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL-----RNLWQ 158
LL V + +++PV++++ + + ++ M +GA D+L KP +++ R L Q
Sbjct: 73 ELLKQV--KLIKQDLPVVILTAYAGVHGAVESMKEGADDYLAKPFDNSKVVMLVHRILLQ 130
Query: 159 H-VWRRHSLLGGHVPQNLHDVYHKGG--AISENNMASSH---SSDYAASSQKNKGSEKVS 212
H + R L + +HD+ G AI A S++ Q G K
Sbjct: 131 HNCYERGKLNEQPIEGGVHDIVTVMGPSAIIHTLAAQVKLVAQSNFNVIIQGATGVGKEV 190
Query: 213 DAQSSRTSSPY 223
AQ+ SPY
Sbjct: 191 VAQAIHAQSPY 201
>gi|359807137|ref|NP_001241095.1| uncharacterized protein LOC100814494 [Glycine max]
gi|255647755|gb|ACU24338.1| unknown [Glycine max]
Length = 244
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 20/137 (14%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL---------KCRPH-------- 86
++ DDS R++I LLR Y V V G A E L P+
Sbjct: 9 VLAVDDSLIDRKLIERLLRTSSYEVTTVDSGSKALEFLGLCENDESNPSTPYVCPNNHQE 68
Query: 87 -SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
++LV+T+ +P ++G+ LL + E +NIPV++MS + S + +C+ +GA +F +
Sbjct: 69 VEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFL 128
Query: 146 KPVRRNELRNLWQHVWR 162
KPVR ++L L H+ +
Sbjct: 129 KPVRLSDLNKLKPHMKK 145
>gi|218781758|ref|YP_002433076.1| response regulator receiver protein [Desulfatibacillum alkenivorans
AK-01]
gi|218763142|gb|ACL05608.1| Protein with response regulator receiver domain [Desulfatibacillum
alkenivorans AK-01]
Length = 122
Score = 68.2 bits (165), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++L+ E D TR+++ ++ G+ V P+G AWETL+ P I +++T+V +P + G
Sbjct: 3 KILIAEDDLITRKVLYKIVEGMGHSVIMSPNGRHAWETLETNP-DISMLITDVMMPEMDG 61
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
L+ LV + +N+P+I++S V + GA FL KP++ +E R
Sbjct: 62 RELIELVRAREEFQNLPIIIISAVVGPKAVANLLKMGATLFLSKPLKVDETR 113
>gi|222631501|gb|EEE63633.1| hypothetical protein OsJ_18450 [Oryza sativa Japonica Group]
Length = 633
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS-IDLVLTEVELPSI 100
L VL+V+ D + + + +L GY V A + + P +V+T+V + +
Sbjct: 23 LHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHIVMTDVHMSGM 82
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL H + +PVIM S + + MV++ ++ GA D+++KP+ ++ +W+HV
Sbjct: 83 DGFDLL-----HRINGRVPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHV 137
Query: 161 --WRRHSL 166
WR +L
Sbjct: 138 LRWRLSAL 145
>gi|90425451|ref|YP_533821.1| two component sigma54 specific Fis family transcriptional regulator
[Rhodopseudomonas palustris BisB18]
gi|90107465|gb|ABD89502.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris BisB18]
Length = 500
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELP 98
M +L+ + D R+++ +++KCGYR V G AA ETL +ID V+ ++ +P
Sbjct: 1 MATTILIADDDAVQRRLVENMVQKCGYRTVVVDSGDAAIETLTADDAPTIDAVVLDLVMP 60
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+ G +L + D +IPVI+ + H I V+ M GA DF++KPV
Sbjct: 61 GLDGMGVLERM--RDAGLSIPVIVQTAHGGIDNVVSAMRAGATDFVVKPV 108
>gi|443479084|ref|ZP_21068741.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena biceps PCC 7429]
gi|443015499|gb|ELS30421.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena biceps PCC 7429]
Length = 336
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGY-RVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++L+++ + R+I+ LR GY + G E + +P +DL+L ++ +P ++
Sbjct: 8 KLLIIDDEQMNREILYRHLRNLGYPNITMAESGKKGLEIVANQP--VDLILLDMMMPMLN 65
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
G +LT + E+ + IPVI++S D M+L C+ KGA D+LIKP R LR
Sbjct: 66 GLEVLTYLKENPEWRVIPVIIISALDEKEMMLACIQKGAEDYLIKPYDRVLLR 118
>gi|225441254|ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 218
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 73/137 (53%), Gaps = 17/137 (12%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL----------KCRPHS-----I 88
++ DDS R++I LL+ Y+V V G A E L P+S +
Sbjct: 11 VLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVSPNSHQEVEV 70
Query: 89 DLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+L++T+ +P ++G+ LL + E +NIPV++MS + S + +C+ +GA +F +KPV
Sbjct: 71 NLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPV 130
Query: 149 RRNELRNLWQHVWRRHS 165
+ +++ L H+ + S
Sbjct: 131 QISDVNRLKPHMMKAKS 147
>gi|238922420|ref|YP_002935934.1| two-component system, OmpR family, response regulator [Eubacterium
eligens ATCC 27750]
gi|238874092|gb|ACR73800.1| two-component system, OmpR family, response regulator [Eubacterium
eligens ATCC 27750]
Length = 236
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLD--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|225377469|ref|ZP_03754690.1| hypothetical protein ROSEINA2194_03117 [Roseburia inulinivorans DSM
16841]
gi|225210686|gb|EEG93040.1| hypothetical protein ROSEINA2194_03117 [Roseburia inulinivorans DSM
16841]
Length = 236
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLD--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|225027390|ref|ZP_03716582.1| hypothetical protein EUBHAL_01646 [Eubacterium hallii DSM 3353]
gi|224955287|gb|EEG36496.1| response regulator receiver domain protein [Eubacterium hallii DSM
3353]
Length = 236
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLD--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|197302214|ref|ZP_03167273.1| hypothetical protein RUMLAC_00941 [Ruminococcus lactaris ATCC
29176]
gi|197298645|gb|EDY33186.1| response regulator receiver domain protein [Ruminococcus lactaris
ATCC 29176]
Length = 236
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLD--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|166033276|ref|ZP_02236105.1| hypothetical protein DORFOR_03002 [Dorea formicigenerans ATCC
27755]
gi|226324215|ref|ZP_03799733.1| hypothetical protein COPCOM_01994 [Coprococcus comes ATCC 27758]
gi|238925827|ref|YP_002939345.1| hypothetical protein EUBREC_3485 [Eubacterium rectale ATCC 33656]
gi|257414028|ref|ZP_04745025.2| DNA-binding response regulator VicR [Roseburia intestinalis L1-82]
gi|323341562|ref|ZP_08081799.1| DNA-binding response regulator [Lactobacillus ruminis ATCC 25644]
gi|429762734|ref|ZP_19295115.1| putative heme response regulator HssR [Anaerostipes hadrus DSM
3319]
gi|166027633|gb|EDR46390.1| response regulator receiver domain protein [Dorea formicigenerans
ATCC 27755]
gi|225207764|gb|EEG90118.1| response regulator receiver domain protein [Coprococcus comes ATCC
27758]
gi|238877504|gb|ACR77211.1| hypothetical protein EUBREC_3485 [Eubacterium rectale ATCC 33656]
gi|257201430|gb|EEU99714.1| DNA-binding response regulator VicR [Roseburia intestinalis L1-82]
gi|291540566|emb|CBL13677.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Roseburia intestinalis
XB6B4]
gi|323091013|gb|EFZ33648.1| DNA-binding response regulator [Lactobacillus ruminis ATCC 25644]
gi|429181138|gb|EKY22328.1| putative heme response regulator HssR [Anaerostipes hadrus DSM
3319]
Length = 236
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLD--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|153854281|ref|ZP_01995580.1| hypothetical protein DORLON_01575 [Dorea longicatena DSM 13814]
gi|149753056|gb|EDM62987.1| response regulator receiver domain protein [Dorea longicatena DSM
13814]
Length = 236
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLD--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|154484836|ref|ZP_02027284.1| hypothetical protein EUBVEN_02554 [Eubacterium ventriosum ATCC
27560]
gi|149733789|gb|EDM49908.1| response regulator receiver domain protein [Eubacterium ventriosum
ATCC 27560]
Length = 236
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLD--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|414888255|tpg|DAA64269.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 563
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ-VKNETKDA 714
R L K+R K+KDR + KKVRYQSRK LA+QRPRV+GQFV+Q V+N+ D
Sbjct: 510 RQEQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRVRGQFVKQAVQNQEGDG 561
>gi|212274883|ref|NP_001130159.1| uncharacterized protein LOC100191253 [Zea mays]
gi|194688426|gb|ACF78297.1| unknown [Zea mays]
gi|194695472|gb|ACF81820.1| unknown [Zea mays]
gi|223975127|gb|ACN31751.1| unknown [Zea mays]
Length = 242
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS------------- 87
R ++ DDS R++I LL+ Y+V V G A E L R S
Sbjct: 9 RFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEID 68
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL V K+IPV++MS + + + +C+ GA +F +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKP 128
Query: 148 VRRNELRNLWQHVWRR 163
V+ +++ L H+ +R
Sbjct: 129 VKLADMKKLKSHLLKR 144
>gi|388854319|emb|CCF52062.1| related to SKN7-transcription factor [Ustilago hordei]
Length = 987
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 16 IDLETEKDGSSEVVRTRWESFLPRMVL--RVLLVEADDSTRQIISALLRKCGYRVAAVPD 73
+D + + G + ++R R +F+P + RVLLV+ D+ R++ S L+ G + D
Sbjct: 674 MDKKRSQSGPANLLRVRRNTFVPGWTVPPRVLLVDDDEVCRRLSSKFLQVFGCSIDYAVD 733
Query: 74 GLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVL 133
G++A K DLVL ++ +P++ G + +L+ + D P+I M+ + S ++
Sbjct: 734 GMSAVN--KMNQEKYDLVLMDIVMPNLDGASATSLIRQFD--PKTPIISMTSNSGPSELI 789
Query: 134 KCMLKGAADFLIKPVRRNELRNLWQ-HVWRRHSLLGGHVPQNLHDVYHKG 182
M G D L KP + L N+ + H+ ++ H L D KG
Sbjct: 790 SYMSSGMTDILPKPFTKEGLLNMLEKHLLHLKTVQQQHRGSGLGDGSEKG 839
>gi|428312293|ref|YP_007123270.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
gi|428253905|gb|AFZ19864.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
Length = 353
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL+V+ +++ R +++ +R+ G+ V DG+ A E + P DLVL ++ +P ++G
Sbjct: 7 RVLVVDDNEANRDLLARRVRRQGHTVTVAEDGIKALELMAQEPF--DLVLLDIMMPKMNG 64
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP----VRRNELRNLWQ 158
+ +L + ++IPVI++S D I+ V++C+ GA D+L KP + +RN +
Sbjct: 65 YQVLEHLKNDPNLRHIPVIVISAVDDINSVVECIELGAEDYLPKPFNAVLLAARIRNCLE 124
Query: 159 HVWRR 163
W R
Sbjct: 125 KKWLR 129
>gi|22831009|dbj|BAC15873.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273487|emb|CAI79411.1| Type A response regulator 7 [Oryza sativa Indica Group]
gi|87116384|dbj|BAE79351.1| typeA response regulator 7 [Oryza sativa Japonica Group]
gi|118790860|tpd|FAA00268.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 206
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 7/106 (6%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
++ DDS+ R +I+ALLR+ YR G A E L P+ + +++T+ +P ++G+
Sbjct: 93 VMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILGSEPN-VSMIITDYWMPEMTGY 147
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LL + E K IPV++MS + + + +C+ +GA DFL+KPVR
Sbjct: 148 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVR 193
>gi|449513573|ref|XP_004164360.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR2-like [Cucumis sativus]
Length = 559
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+ F P+ LRVLL++ D S+ I L + Y V + A + +P + + +
Sbjct: 11 WKDF-PKG-LRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAI 68
Query: 93 TEVELPSISG-FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
EV + G F L + K++P IM+S +S ++KC+ GA +FL KP+ +
Sbjct: 69 VEVTTSNHEGNFKFL------EAAKDLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDD 122
Query: 152 ELRNLWQHVWRRHSLLGG 169
+LRN+WQHV + GG
Sbjct: 123 KLRNIWQHVVHKAFNAGG 140
>gi|334117422|ref|ZP_08491513.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460531|gb|EGK89139.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
Length = 352
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ ++ R +++ L++ G+ V DGL A E L+ P DLVL ++ +P ++G+
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRSDP--FDLVLLDIMMPQMNGY 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+L + + + IPVIM+S D I +++C+ GA D+L KP
Sbjct: 66 QVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|333901628|ref|YP_004475501.1| hypothetical protein Psefu_3445 [Pseudomonas fulva 12-X]
gi|333116893|gb|AEF23407.1| Diverse 7TM receptor transmembrane region [Pseudomonas fulva 12-X]
Length = 799
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+VE + + +I +L K GYRV V +G A E L+ P ID VL + ++P + GF
Sbjct: 679 VLIVEDNAINQLVIRGMLLKLGYRVRTVDNGSDALEQLQREP--IDAVLLDCQMPVMDGF 736
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
A + + C +PV+ ++ H +C+ G +D+L KPV+ +ELR L H W
Sbjct: 737 ATCRALRQLPACAELPVLAITAHSQSGDRERCLAAGMSDYLAKPVKFDELRVL-LHDW 793
>gi|449464910|ref|XP_004150172.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 560
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+ F P+ LRVLL++ D S+ I L + Y V + A + +P + + +
Sbjct: 11 WKDF-PKG-LRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAI 68
Query: 93 TEVELPSISG-FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
EV + G F L + K++P IM+S +S ++KC+ GA +FL KP+ +
Sbjct: 69 VEVTTSNHEGNFKFL------EAAKDLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDD 122
Query: 152 ELRNLWQHVWRRHSLLGG 169
+LRN+WQHV + GG
Sbjct: 123 KLRNIWQHVVHKAFNAGG 140
>gi|356562779|ref|XP_003549646.1| PREDICTED: two-component response regulator ARR5-like isoform 1
[Glycine max]
Length = 206
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------IDLVL 92
L VL V+ R++I LL+ +V V G A + L + ++L++
Sbjct: 26 LHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGFDSVKVNLIM 85
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+ +P ++G+ LL + E V + IPV++MS + ++ + +C+ +GA DFL+KPV+ ++
Sbjct: 86 TDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSD 145
Query: 153 LRNL 156
+R L
Sbjct: 146 VRRL 149
>gi|254584927|ref|XP_002498031.1| ZYRO0G00484p [Zygosaccharomyces rouxii]
gi|238940925|emb|CAR29098.1| ZYRO0G00484p [Zygosaccharomyces rouxii]
Length = 647
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLV 91
++SF+ R VLLVE D Q+ S LRK G V V DGLAA TL K R DLV
Sbjct: 367 YDSFVLREGFHVLLVEDDAVCIQLCSKFLRKYGCTVEVVTDGLAAISTLEKFR---YDLV 423
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
L ++ +P++ G ++V D+ + P+I M+ + ++ + G D L KP ++
Sbjct: 424 LMDIVMPNLDGATATSIVRSFDI--HTPIIAMTGNIEDQDLITYLQHGMNDILAKPFTKD 481
Query: 152 ELRNLWQHVWR 162
+L ++ R
Sbjct: 482 DLHSMLIRYLR 492
>gi|374316722|ref|YP_005063150.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Sphaerochaeta pleomorpha str. Grapes]
gi|359352366|gb|AEV30140.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Sphaerochaeta pleomorpha str. Grapes]
Length = 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M ++ + D + R+I+ LL+K GY+V +G + LK SIDL+L ++++P
Sbjct: 1 MAKHIVTTDDDPAIRKILQILLKKEGYQVTLCTNGNELLDLLKTESESIDLILLDIKMPG 60
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
SGF +L + +IPV+M++ + +K M GA+D+L KPV R L + +
Sbjct: 61 PSGFEVLESIRHR--YPSIPVVMLTAFSDLDTGMKAMRLGASDYLAKPVLREALISCVER 118
Query: 160 VWRRHSL 166
V + ++
Sbjct: 119 VIDKSTV 125
>gi|224138036|ref|XP_002326502.1| pseudo response regulator [Populus trichocarpa]
gi|222833824|gb|EEE72301.1| pseudo response regulator [Populus trichocarpa]
Length = 448
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+ F P+ LRVLL++ D + I + L Y V + A + P S + +
Sbjct: 11 WKDF-PKG-LRVLLLDEDSMSAAEIKSKLEAMDYIVYTFCNETEALSAISNEPGSFHVAI 68
Query: 93 TEVELPSIS-GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
EV + + S F L + K++P IM S D ++ ++KC+ GA +FL KP+ +
Sbjct: 69 VEVSMSNSSRSFKFL------ETSKDLPTIMTSSIDCLNTMMKCIALGAVEFLRKPLSED 122
Query: 152 ELRNLWQHVWRRHSLLGGHV 171
+LRN+WQHV + GG V
Sbjct: 123 KLRNIWQHVVHKAFNAGGSV 142
>gi|451819198|ref|YP_007455399.1| Two component transcriptional regulator, winged helix family
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451785177|gb|AGF56145.1| Two component transcriptional regulator, winged helix family
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 225
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +L+VE D ++ SA+L K GY+ V DG+ A L IDL+L+++ +P++
Sbjct: 1 MFHILIVEDDKELCELFSAVLLKNGYKTTCVNDGIEALNALD--KEYIDLILSDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF L+ + D N+PV+M++ +S + + G D++IKP+ NE+
Sbjct: 59 DGFELIKSI--RDAQFNLPVLMITAKESFQDIKRGFSLGIDDYMIKPINVNEM 109
>gi|414888256|tpg|DAA64270.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 307
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ-VKNETKDA 714
R L K+R K+KDR + KKVRYQSRK LA+QRPRV+GQFV+Q V+N+ D
Sbjct: 254 RQEQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRVRGQFVKQAVQNQEGDG 305
>gi|392377746|ref|YP_004984905.1| putative chemotaxis regulator CheY [Azospirillum brasilense Sp245]
gi|356879227|emb|CCD00131.1| putative chemotaxis regulator CheY [Azospirillum brasilense Sp245]
Length = 144
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYR-VAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
LRVLL+E DD TR+++S LL+ R V DG+AA L+ +DL + ++E+P +
Sbjct: 18 LRVLLIEDDDFTRRLMSRLLQDLKVRHVWEASDGMAALGILRDHAEEVDLAICDLEMPRM 77
Query: 101 SGFALLTLV--MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
SG LL + + ++PVI+++ H V + + G + +L+KPV + +L
Sbjct: 78 SGLDLLHALRTATGNPLADLPVIVLTAHREADTVKRAIAYGISGYLVKPVSKADL 132
>gi|242055597|ref|XP_002456944.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
gi|241928919|gb|EES02064.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
Length = 245
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPH-------------- 86
R ++ DDS R++I LL+ Y+V V G A E L R +
Sbjct: 9 RFHVLAVDDSIVDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDNGAEDASSPSSSSPD 68
Query: 87 ----SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAAD 142
++L++T+ +P ++G+ LL V K+IPV++MS + + + +C+ GA +
Sbjct: 69 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEE 128
Query: 143 FLIKPVRRNELRNLWQHVWRR 163
F +KPV+ +++ L H+ +R
Sbjct: 129 FFLKPVKLADMKKLKSHLLKR 149
>gi|168033319|ref|XP_001769163.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679589|gb|EDQ66035.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 638 VPQNLNGCTLFIH--DGFNGISAR-HSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAE 694
+P ++G +F H G + AR + QR A+LT+FR KRK+RCYDKK+RY RK +A+
Sbjct: 162 IPPGMSGVNMFSHHHKGLTELPARMNMPQRLASLTRFREKRKERCYDKKIRYTVRKEVAQ 221
Query: 695 QRPRVKGQF 703
+ R KGQF
Sbjct: 222 RMQRKKGQF 230
>gi|148266280|ref|YP_001232986.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter uraniireducens Rf4]
gi|146399780|gb|ABQ28413.1| response regulator receiver modulated metal dependent
phosphohydrolase [Geobacter uraniireducens Rf4]
Length = 361
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
V++V+ D + I++LL+ G+ V DG A E+ R S+D+VLT+V +P +G
Sbjct: 9 VIVVDDDPYVLESIASLLKVYGFMVRTFQDGTMALESF--RKESVDVVLTDVNMPVTTGI 66
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+L + EHD + PV++M+ + + + + + KGA DF+IKP
Sbjct: 67 NVLENIREHD--RETPVMLMTAYAELDLAVSAIKKGAFDFIIKP 108
>gi|297847198|ref|XP_002891480.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
gi|297337322|gb|EFH67739.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
Length = 530
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + +T + ++++ Y+V D A L H I++V+ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVTIETDAEKALAYLTSCKHEINIVIWDFHMPGIDGL 95
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
L + ++PV++MS + V+K + GA D+++KPV+ + N+WQH+ R+
Sbjct: 96 QALKSIGSK---MDLPVVIMSDDNQTESVMKATINGACDYVVKPVKEEVIANIWQHIVRK 152
>gi|251779963|ref|ZP_04822883.1| response regulator [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084278|gb|EES50168.1| response regulator [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 218
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M + VL++E D++ +I L GY+ + DGL A+ LK P DL+L ++ LP
Sbjct: 1 MKINVLIIEDDEAISNLIKINLSMVGYKSKQLFDGLEAFNLLKEEP--FDLILMDIMLPG 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+ GF L+ + + NIPVI ++ + ++ + + GA D+++KP EL +
Sbjct: 59 MDGFELMKKIKD----LNIPVIFLTAKNGLADKVTGLKSGAEDYIVKPFETVELLARIEI 114
Query: 160 VWRRHS 165
V RR+S
Sbjct: 115 VLRRYS 120
>gi|94265045|ref|ZP_01288813.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93454478|gb|EAT04766.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 462
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ DD+ R ++ A+L + G++ A DG AA E ++ +P D VL +V + + G
Sbjct: 10 ILVVDDDDAHRYMLKAMLAQWGWQTAEAVDGQAAVEAVRQQP--FDAVLMDVRMARMDGM 67
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
L L+ H+ IPV++M+ + SI + + GA D+L KP+ + LR
Sbjct: 68 EALGLIQAHNPA--IPVVIMTAYSSIDSAVAAIKAGARDYLTKPLDFDRLR 116
>gi|164688779|ref|ZP_02212807.1| hypothetical protein CLOBAR_02426 [Clostridium bartlettii DSM
16795]
gi|164602255|gb|EDQ95720.1| response regulator receiver domain protein [Clostridium bartlettii
DSM 16795]
Length = 216
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+++L+VE + R +IS L+ GY V DG+ A + L+ +DL+L +V +P I
Sbjct: 1 MKILVVEDEAPIRDLISINLQLVGYEVFTAEDGIIAEKFLE--NQKVDLILLDVMIPGID 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF+L+ + +H N PVI ++ +S+ +K + GA D++IKP EL + V
Sbjct: 59 GFSLIEKIKKH----NTPVIFVTAKESVLDRVKGLRLGAEDYIIKPFETIELLARVEVVL 114
Query: 162 RRHS 165
RR++
Sbjct: 115 RRYN 118
>gi|222053639|ref|YP_002536001.1| Fis family transcriptional regulator [Geobacter daltonii FRC-32]
gi|221562928|gb|ACM18900.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter daltonii FRC-32]
Length = 454
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ + R I++A+L+K GY AAVP A L + DL+LT++++ +SG
Sbjct: 5 ILIVDDEKGQRDILTAILQKQGYATAAVPGAREALAELADK--EFDLILTDLKMQGMSGM 62
Query: 104 ALL-TLVMEHD-VCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
L+ TL+ +++ C V+MM+ H +I ++ M KGA D+L KP+ R +L + +
Sbjct: 63 ELMETLLTDNNRQC----VVMMTAHGTIDSAVEAMKKGAFDYLEKPLEREDLLLTVKRAF 118
Query: 162 RRHSLLGGHVPQNLHDVYHKGGAISENNMASSH 194
LL H LH + AIS NM H
Sbjct: 119 EHIGLL--HENAVLHRKLKETMAIS--NMIGEH 147
>gi|405355108|ref|ZP_11024334.1| Response regulator of zinc sigma-54-dependent two-component system
[Chondromyces apiculatus DSM 436]
gi|397091450|gb|EJJ22252.1| Response regulator of zinc sigma-54-dependent two-component system
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 461
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLLV+ D + +++ ALL + G + DG A L +P +D+V+++V +P + G
Sbjct: 9 VLLVDDDPAVAKVLGALLTQAGLTTYSARDGREALSLLANKP--VDVVVSDVRMPGMDGL 66
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+L V ++PVI+++ H ++ + ++ M GAADF++KP R E+
Sbjct: 67 QVLAEVSRG--WPDVPVILLTAHGTVPLAVEAMKAGAADFVLKPFDREEI 114
>gi|393767682|ref|ZP_10356228.1| transcriptional regulator [Methylobacterium sp. GXF4]
gi|392726945|gb|EIZ84264.1| transcriptional regulator [Methylobacterium sp. GXF4]
Length = 248
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LLVE DD R ++ +LR+ G+RV G W L P +DLVL +V LP SGF
Sbjct: 16 ILLVEDDDGMRVLVGRILRESGFRVTGCRGGAEMWSLLPDTP--VDLVLLDVMLPGASGF 73
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL + +PVIM+S + + + + GA D++ KP R EL + V RR
Sbjct: 74 DLLRALRAK---GTVPVIMLSARNEEADRVLGLELGADDYVAKPFGRPELLARIRAVLRR 130
Query: 164 HSL 166
+L
Sbjct: 131 SAL 133
>gi|346992834|ref|ZP_08860906.1| two-component hybrid sensor and regulator [Ruegeria sp. TW15]
Length = 520
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ ++ R +++ L + G++V G +A E K H+ DLVL ++ +P ++G+
Sbjct: 176 ILVVDDVEANRTLLARRLERDGHQVWTADGGYSALE--KLSQHAFDLVLLDLMMPDLNGY 233
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+L + E+D ++IPVIM+S D I V +C+ GA D+L KP
Sbjct: 234 DVLKRLKENDDWRDIPVIMISAFDEIESVARCVEIGAEDYLPKP 277
>gi|149190378|ref|ZP_01868650.1| luxO repressor protein [Vibrio shilonii AK1]
gi|148835757|gb|EDL52722.1| luxO repressor protein [Vibrio shilonii AK1]
Length = 465
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+VE S + + L G + V +G A ++L R + DL+L ++ LP ++G
Sbjct: 13 LLMVEDTASVAALYRSYLSPLGIDINIVGNGRDAIQSLAHR--TPDLILLDLRLPDMTGM 70
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+L V E + ++PVI M+ H SI + + M GA DFLIKP + LR + R+
Sbjct: 71 DVLDAVKEFN--PDVPVIFMTAHGSIDIAVDAMQHGAQDFLIKPCEADRLRVTVTNAIRK 128
Query: 164 HSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSRTSSPY 223
S L + N+ +S + + SSQ + + D+ +S +S +
Sbjct: 129 ASKLRNEI----------------NDSSSQNYQGFIGSSQPMQAVYRTIDSAASSKASIF 172
Query: 224 LEAES 228
+ ES
Sbjct: 173 ITGES 177
>gi|50400670|sp|Q9M9B9.2|ARR19_ARATH RecName: Full=Putative two-component response regulator ARR19
Length = 407
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + +T + ++++ Y+V+ D A L H I++V+ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 104 -ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
AL ++ + D +PV++MS + V+K GA D+++KPV+ + N+WQH+ R
Sbjct: 96 QALKSITSKLD----LPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVR 151
Query: 163 RHSLLGGHV 171
+ + V
Sbjct: 152 KRLIFKPDV 160
>gi|414589073|tpg|DAA39644.1| TPA: hypothetical protein ZEAMMB73_370141 [Zea mays]
gi|414872989|tpg|DAA51546.1| TPA: hypothetical protein ZEAMMB73_745932 [Zea mays]
Length = 576
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 123 MSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLG 168
MS D +S+V+KC+ GAA++L+KP+R NEL NLW HVWRR +LG
Sbjct: 1 MSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRRRMLG 46
>gi|125552239|gb|EAY97948.1| hypothetical protein OsI_19866 [Oryza sativa Indica Group]
Length = 604
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS-IDLVLTEVELPSI 100
L VL+V+ D + + + +L GY V A + + P +V+T+V + +
Sbjct: 23 LHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHIVMTDVHMSGM 82
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL H + +PVIM S + + MV++ ++ GA D+++KP+ ++ +W+HV
Sbjct: 83 DGFDLL-----HRINGRVPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHV 137
Query: 161 --WRRHSL 166
WR +L
Sbjct: 138 LRWRLSAL 145
>gi|52783218|sp|O23100.2|APRR8_ARATH RecName: Full=Putative two-component response regulator-like APRR8;
AltName: Full=Pseudo-response regulator 8
Length = 367
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLL+++D + +S ++RKCGY+V A + + IDLVL E L ++ +
Sbjct: 16 VLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKY 75
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL + +C+ IPV++ H ++V +C+ +GA L KP+ N+ + LWQ R
Sbjct: 76 ELLEKI--RSICE-IPVVVSGAHVKDAIV-ECLCRGAKLCLEKPLMENDFKILWQFTVSR 131
Query: 164 HSLLGGHV----PQNLHDVYHK---GGAISENN 189
+ P+ H + H G + +NN
Sbjct: 132 QRNFRSQIDINPPEKNHSITHTQSLGAELKKNN 164
>gi|302342658|ref|YP_003807187.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
gi|301639271|gb|ADK84593.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
Length = 288
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Query: 37 LPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
LP R+L+ + +D+ R+++ L G++V DG A + + +P DLVL++V
Sbjct: 11 LPVRPSRILVADDEDALRELLKRFLETKGHQVVLAQDGREALKLFREQP--FDLVLSDVR 68
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+P + G LL V D+ PV+++S + I V+ + GA +FL KP+R + LR +
Sbjct: 69 MPGLDGLQLLAAV--KDINPRTPVVLISGYGDIETVVTALKAGAENFLAKPIRIDMLRRV 126
>gi|411118665|ref|ZP_11391045.1| signal transduction histidine kinase [Oscillatoriales
cyanobacterium JSC-12]
gi|410710528|gb|EKQ68035.1| signal transduction histidine kinase [Oscillatoriales
cyanobacterium JSC-12]
Length = 695
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ DD+ ++ LR+ +A DG AA + + +P DLVL ++ +P I+G
Sbjct: 7 RLLIVDDDDTVCTYLTRQLRQFSQTIAIANDGQAAIDLIHAQP--FDLVLLDILMPGING 64
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
F +L + H + PVI++S D + +++C+ GA D+L KP+
Sbjct: 65 FQVLESLKSHAILPQTPVIVISGLDDLDSLIRCIELGAEDYLFKPL 110
>gi|302875105|ref|YP_003843738.1| two component transcriptional regulator, winged helix family
[Clostridium cellulovorans 743B]
gi|307690270|ref|ZP_07632716.1| two component transcriptional regulator, winged helix family
protein [Clostridium cellulovorans 743B]
gi|302577962|gb|ADL51974.1| two component transcriptional regulator, winged helix family
[Clostridium cellulovorans 743B]
Length = 224
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ VL+VE + + R+++ A L K GY++ DG+ A + L + IDL+++++ +P++
Sbjct: 1 MFHVLIVEDNTNIRKLMIARLEKEGYKIFDAEDGIKALQILD--SYHIDLIISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L + E N+P++M++ +S K L GA D+++KP+ NE+ +
Sbjct: 59 DGYELTMSLRESQY--NMPILMITARESYEDKEKGFLFGADDYMVKPINLNEMVLRVAAL 116
Query: 161 WRRHSLLGGHVPQ 173
RR ++ H Q
Sbjct: 117 LRRSKIVSEHKLQ 129
>gi|33330868|gb|AAQ10677.1| type-A response regulator [Catharanthus roseus]
Length = 188
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 15/126 (11%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKC-------------RPHSIDL 90
++ DDS R++I LL+ Y+V V G+ A E L + ++L
Sbjct: 12 VLAVDDSLVDRKLIERLLKTSAYQVTVVDSGIKALEFLGLLDEEKEISGSNHQQVVEVNL 71
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
++T+ +P ++G+ LL V E K+IPV++MS + S + +C+ +GA DF +KPV++
Sbjct: 72 IITDYSMPGMTGYDLLRKVKESSYLKDIPVVIMSSENIPSRINRCLEEGADDFFLKPVKQ 131
Query: 151 NELRNL 156
+++ L
Sbjct: 132 SDVNKL 137
>gi|242093586|ref|XP_002437283.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
gi|241915506|gb|EER88650.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
Length = 685
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 28/145 (19%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP---HSIDLVLTEVELP 98
LRVL VE D R+++ L+ C Y V + A + L+ R + DLV++ V +P
Sbjct: 10 LRVLAVEHDRVCRKVLERQLQYCNYNATMVTNAQTALDMLRERKEYGNQFDLVISNVVMP 69
Query: 99 --SISGFALLTLV-MEHDVCKNIPVI------------------MMSLHDSISMVLKCML 137
++ GF LL L+ +E D +PVI ++S + ++K +
Sbjct: 70 KPNMDGFKLLELIGLEMD----LPVICNKALAQTYFLHFYGTLYVLSANSETQTIMKGIK 125
Query: 138 KGAADFLIKPVRRNELRNLWQHVWR 162
GA ++++KPVR +LR +W HV +
Sbjct: 126 HGACEYMVKPVRLEQLRGIWTHVVK 150
>gi|392379365|ref|YP_004986524.1| putative sensor histidine kinase with multiple PAS and a response
regulator receiver domain (modular protein)
[Azospirillum brasilense Sp245]
gi|356881732|emb|CCD02725.1| putative sensor histidine kinase with multiple PAS and a response
regulator receiver domain (modular protein)
[Azospirillum brasilense Sp245]
Length = 1232
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 8 VSSEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDST--RQIISALLRKCG 65
V+++GG + L G++E V PR++L ADD+ R +S LL
Sbjct: 608 VAADGGAPVTL----IGAAETVMAPETGECPRLLL------ADDNADMRDYVSRLL-NGR 656
Query: 66 YRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMS 124
Y V AVPDG AA ++ RP DLVLT++ +P + GF LL + E +++PVI++S
Sbjct: 657 YAVEAVPDGQAALAAMRANRP---DLVLTDIMMPVLDGFGLLRAIREDADLRDLPVILLS 713
Query: 125 LHDSISMVLKCMLKGAADFLIKPVRRNEL 153
++ + GA D+L+KP EL
Sbjct: 714 ARAGEEASVEGLSAGADDYLVKPFSAREL 742
>gi|429332277|ref|ZP_19213007.1| two component transcriptional regulator [Pseudomonas putida CSV86]
gi|428763108|gb|EKX85293.1| two component transcriptional regulator [Pseudomonas putida CSV86]
Length = 236
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +LLV+ D R+++ A L +CG++V AV DG A + L DLV+ +V LP
Sbjct: 1 MSKSILLVDDDQDIRELLDAYLSRCGFQVRAVADGQAFRQALDA--EGSDLVILDVMLPD 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSL-HDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
GF+L V EH +P+IM++ D V+ L GA D+L KP EL+ +
Sbjct: 59 EDGFSLCRWVREHPRQARVPIIMLTASSDEADRVIGLEL-GADDYLGKPFSPRELQARIK 117
Query: 159 HVWRR 163
+ RR
Sbjct: 118 ALLRR 122
>gi|357387086|ref|YP_004901924.1| putative two-component system response regulator [Kitasatospora
setae KM-6054]
gi|311893560|dbj|BAJ25968.1| putative two-component system response regulator [Kitasatospora
setae KM-6054]
Length = 249
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVLLVE D++ R+ I+ L + GYRVA PDGL+ E + H DL++ +V LP +
Sbjct: 21 VRVLLVEDDETIRRSIALALERYGYRVATAPDGLSGLEAFREGGH--DLLILDVMLPHLD 78
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
G L + E P++MMS V+ + GA D+++KPV
Sbjct: 79 GIGLCRRIRE---SSQAPILMMSARGHSLDVVSGLEAGADDYVVKPV 122
>gi|254559730|ref|YP_003066825.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Methylobacterium extorquens DM4]
gi|418057727|ref|ZP_12695713.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens DSM 13060]
gi|254267008|emb|CAX22812.1| putative DNA-binding response regulator in two-component regulatory
system with ArcB or CpxA (putative arcA=cpxC, dye, fexA,
msp) [Methylobacterium extorquens DM4]
gi|373568680|gb|EHP94623.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens DSM 13060]
Length = 244
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH-SIDLVLTEVELPSISG 102
VLLVE DD R +++ +LR+ GYRV G W +P ++DLVL +V LP +SG
Sbjct: 12 VLLVEDDDGIRALVTRILRESGYRVTGCRSGADMW---SLQPDLAVDLVLLDVMLPGVSG 68
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
F LL + +PVIM+S + + + + GA D++ KP R EL + V R
Sbjct: 69 FDLLRALRAK---GTVPVIMLSARNEEADRVLGLELGADDYVAKPFGRPELLARIRAVLR 125
Query: 163 RHSL 166
R S+
Sbjct: 126 RASI 129
>gi|218529080|ref|YP_002419896.1| transcriptional regulator [Methylobacterium extorquens CM4]
gi|240141918|ref|YP_002966426.1| DNA-binding response regulator in two-component regulatory system
[Methylobacterium extorquens AM1]
gi|218521383|gb|ACK81968.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens CM4]
gi|240011860|gb|ACS43085.1| DNA-binding response regulator in two-component regulatory system
[Methylobacterium extorquens AM1]
Length = 244
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH-SIDLVLTEVELPSISG 102
VLLVE DD R +++ +LR+ GYRV G W +P ++DLVL +V LP +SG
Sbjct: 12 VLLVEDDDGIRALVTRILRESGYRVTGCRSGADMW---SLQPDLAVDLVLLDVMLPGVSG 68
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
F LL + +PVIM+S + + + + GA D++ KP R EL + V R
Sbjct: 69 FDLLRALRAK---GTVPVIMLSARNEEADRVLGLELGADDYVAKPFGRPELLARIRAVLR 125
Query: 163 RHSL 166
R S+
Sbjct: 126 RASI 129
>gi|402299003|ref|ZP_10818643.1| transcriptional regulator [Bacillus alcalophilus ATCC 27647]
gi|401725795|gb|EJS99062.1| transcriptional regulator [Bacillus alcalophilus ATCC 27647]
Length = 225
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWET-LKCRPHSIDLVLTEVELPSIS 101
R+L++E + + Q++ A +K GY+V V DG A + L RP DLVL +V LP +
Sbjct: 3 RILIIEDEKAISQVLKAYTKKAGYQVEQVYDGKEALDVFLSFRP---DLVLLDVMLPYKN 59
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G+ LL + E +C PVIM++ D + L + +GA D++ KP +E+ Q V
Sbjct: 60 GWELLKEIRECSMC---PVIMLTALDDVQDKLLGLHEGADDYITKPFIGDEVIARIQAVL 116
Query: 162 RR 163
RR
Sbjct: 117 RR 118
>gi|95929451|ref|ZP_01312194.1| response regulator receiver protein [Desulfuromonas acetoxidans DSM
684]
gi|95134567|gb|EAT16223.1| response regulator receiver protein [Desulfuromonas acetoxidans DSM
684]
Length = 129
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++L+V+ ++++R + LL + GY V G A + L+ H +++VL+++ +P + G
Sbjct: 7 KILVVDDEENSRVCLGKLLTQAGYDATCVSGGHEALDYLE--HHPVNIVLSDIRMPDMDG 64
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
+LL + EH V+M++ H + L+ + GA DF+ KPVR NEL+ + + +
Sbjct: 65 LSLLNEIHEH--YPETRVVMVTAHGEVETYLEAVNLGACDFVHKPVRFNELKLVLEKLSI 122
Query: 163 RHSL 166
H+L
Sbjct: 123 THAL 126
>gi|413919924|gb|AFW59856.1| cytokinin response regulator2 [Zea mays]
Length = 159
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSISG 102
VL V+ R +I+ +LR YRV V A E L +++++T+ +P ++G
Sbjct: 41 VLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLALGLVPDVNMIITDYWMPGMTG 100
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+ LL V E + IPV++MS + + + +C+ +GA DFL+KPVR ++ L
Sbjct: 101 YELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADVSRL 154
>gi|412987623|emb|CCO20458.1| Sigma factor sigB regulation protein rsbU [Bathycoccus prasinos]
Length = 947
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH--SIDLVLTEVELPS 99
LR+LLVE D T II+++L + G V +G A E L+ + IDL+LT++ +P
Sbjct: 186 LRILLVEDDIPTSLIITSMLTQAGAIVTNASNGKQALERLRDNNYHEKIDLILTDIMMPE 245
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISM---VL---KCMLKGAADFLIKPVRRNEL 153
+ G L +++ ++ K +P+I+MS+ D + VL K GA FL KP+ ++
Sbjct: 246 VDGIELCSILSKNPKLKEVPIIVMSVSDHLEATGEVLDESKAHAIGAEGFLQKPLSKDVC 305
Query: 154 RNL 156
R++
Sbjct: 306 RSM 308
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQF 703
+ +R A+ +F KRK+R ++KKVRY SRK LAE RPRV+GQF
Sbjct: 860 AERRALAIARFLKKRKERKFEKKVRYASRKRLAEARPRVRGQF 902
>gi|296090342|emb|CBI40161.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-----KCRPH-- 86
+S + R ++ LL + ++I LL+ ++V AV G A E L + R H
Sbjct: 16 DSLIDRKLIEKLLKTSSFQDSKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHP 75
Query: 87 ---SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADF 143
++L++T+ +P ++G+ LL + E K+IPV++MS + S + +C+ +GA DF
Sbjct: 76 QETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDF 135
Query: 144 LIKPVRRNELRNLWQHVWRRHSLL 167
+KPV+ +++ L H+ +LL
Sbjct: 136 FLKPVQLSDVNKLRPHLLGSRTLL 159
>gi|167749920|ref|ZP_02422047.1| hypothetical protein EUBSIR_00888 [Eubacterium siraeum DSM 15702]
gi|167657087|gb|EDS01217.1| diguanylate cyclase (GGDEF) domain protein [Eubacterium siraeum DSM
15702]
Length = 818
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ + R ++S +L Y + DG A LK R + IDLVL ++ +P++ G
Sbjct: 25 RILIVDDSEMNRDMLSDMLSD-DYDIVEAADGEEALSILKERVYDIDLVLLDIIMPAVDG 83
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
F +L ++ + N PVIM+S S S + K G D++I+P
Sbjct: 84 FGVLDVMKRYHWIDNTPVIMISSETSQSYIRKAFELGVTDYIIRP 128
>gi|291087261|ref|ZP_06345880.2| DNA-binding response regulator ResD [Clostridium sp. M62/1]
gi|313115944|ref|ZP_07801371.1| response regulator receiver domain protein [Faecalibacterium cf.
prausnitzii KLE1255]
gi|291075611|gb|EFE12975.1| response regulator receiver domain protein [Clostridium sp. M62/1]
gi|310621708|gb|EFQ05236.1| response regulator receiver domain protein [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 236
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLV--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|160942544|ref|ZP_02089792.1| hypothetical protein FAEPRAM212_00020 [Faecalibacterium prausnitzii
M21/2]
gi|158446160|gb|EDP23163.1| response regulator receiver domain protein [Faecalibacterium
prausnitzii M21/2]
Length = 236
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLV--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|262275534|ref|ZP_06053344.1| sensor histidine kinase CqsS [Grimontia hollisae CIP 101886]
gi|262220779|gb|EEY72094.1| sensor histidine kinase CqsS [Grimontia hollisae CIP 101886]
Length = 532
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+++V+ ++ RQ S +L K G+ V PDG A ETL HSIDL+L ++E+P + G
Sbjct: 413 IMVVDDSETLRQFTSIILEKQGFNVVQCPDGNCAIETLTNGGHSIDLILMDIEMPVMDGL 472
Query: 104 ALLTLVMEHDV--CKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+ + H + +IP+I + +S + + K + G DFL+KP + +LR+
Sbjct: 473 E-TSRRIRHSIQAYADIPIIAHTGDNSKTTLEKILSSGMTDFLVKPSDQQQLRD 525
>gi|282899667|ref|ZP_06307631.1| Multi-component Transcriptional regulator, Winged helix family
[Cylindrospermopsis raciborskii CS-505]
gi|281195546|gb|EFA70479.1| Multi-component Transcriptional regulator, Winged helix family
[Cylindrospermopsis raciborskii CS-505]
Length = 1317
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLVLTEVELPSIS 101
++L+V+ D T +++ LL G + + WET K +P D+++ ++E+P++S
Sbjct: 375 KILVVDDDLKTLELLQVLLTPWGLEIITLNHPGKFWETWEKIQP---DMLILDIEMPTMS 431
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G L ++ HD + +P++ +++H ++ +V + GA DF+ KP+ +EL N +
Sbjct: 432 GIELCKMIRSHDQGREVPILFLTVHSNVEIVNQVFSVGADDFVSKPIIISELFNRILNRL 491
Query: 162 RRHSLLGGHVPQNLHDVYHKGGAISENN 189
R L V + Y K I+ENN
Sbjct: 492 ERVRL----VKIMERNRYAKTNQINENN 515
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+++L+VE D+ ++ L + Y V DG AW+ ++ + DL+L ++ LP +
Sbjct: 1 MKILVVEDDELIAYTLTNFLTEQNYAVELANDGKTAWDLVET--YEYDLILLDIVLPKLD 58
Query: 102 GFALLTLVMEHDVCKNI-------PVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
G +L CK I P+++++ DS + GA D+++KP EL
Sbjct: 59 GISL---------CKKIRSSGRRVPILLLTGRDSSHDKAIGLDAGADDYVVKPCDEEELV 109
Query: 155 NLWQHVWRR 163
+ + RR
Sbjct: 110 ARVRALLRR 118
>gi|257438018|ref|ZP_05613773.1| DNA-binding response regulator VicR [Faecalibacterium prausnitzii
A2-165]
gi|257199678|gb|EEU97962.1| response regulator receiver domain protein [Faecalibacterium
prausnitzii A2-165]
Length = 236
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAEALEVLV--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|408795928|gb|AFU91979.1| response regulator 1 protein [Pinus pinaster]
Length = 184
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL---------VLTE 94
++ DDS R++I LL+ YRV V A + L DL ++T+
Sbjct: 17 VLAVDDSVLDRKLIEKLLKISSYRVTTVDSVRKALQFLGLEDDEDDLNVDNIQVNMIITD 76
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+P ++G+ LL V E K+IPV++MS + S +CM +GA +FL+KPV+ ++++
Sbjct: 77 YCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRKSRCMSEGAQEFLLKPVQLSDVK 136
Query: 155 NLWQHVWRR 163
L H+ +
Sbjct: 137 KLRSHILNK 145
>gi|425441345|ref|ZP_18821622.1| putative Chemotaxis protein CheY homolog [Microcystis aeruginosa
PCC 9717]
gi|389717967|emb|CCH98011.1| putative Chemotaxis protein CheY homolog [Microcystis aeruginosa
PCC 9717]
Length = 129
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 45 LLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFA 104
++V+ + R++++ L K GYR+ DGL AWE L+ + DL+L ++E+P ++G
Sbjct: 1 MIVDDSVTAREMLAISLVKAGYRIEKARDGLEAWEKLQA-GLACDLILCDIEMPRLNGLE 59
Query: 105 LLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
LL+ + E + + IPV M++ S M KGA + +KP
Sbjct: 60 LLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKP 102
>gi|187933594|ref|YP_001887202.1| response regulator [Clostridium botulinum B str. Eklund 17B]
gi|187721747|gb|ACD22968.1| response regulator [Clostridium botulinum B str. Eklund 17B]
Length = 218
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M + VL++E D++ +I L GY+ + DGL A+ LK S DL+L ++ LP
Sbjct: 1 MKINVLIIEDDEAISNLIKINLSMVGYKSKQLFDGLEAFNLLK--EESFDLILMDIMLPG 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+ GF L+ + + NIPVI ++ + ++ + + GA D+++KP EL +
Sbjct: 59 MDGFELMKKIKD----LNIPVIFLTAKNGLADKVTGLKSGAEDYIVKPFETVELLARIEI 114
Query: 160 VWRRHS 165
V RR+S
Sbjct: 115 VLRRYS 120
>gi|197120180|ref|YP_002140607.1| sigma-54-dependent transcriptional response regulator [Geobacter
bemidjiensis Bem]
gi|197089540|gb|ACH40811.1| sigma-54-dependent transcriptional response regulator [Geobacter
bemidjiensis Bem]
Length = 455
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M+ +L+V+ + R I++A+L K GY + G A + L+ DL+LT++++
Sbjct: 1 MIGSILIVDDEKGQRDILTAILTKMGYNIQTASGGEEALQQLQ--QEEFDLLLTDLKMQG 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
ISG L+ V+ + + V+MM+ H +I ++ M KGA D+L KP+ R +L Q
Sbjct: 59 ISGMELMERVLADNPSQC--VVMMTAHGTIDSAVEAMKKGAFDYLEKPLEREDLILTVQR 116
Query: 160 VWRRHSLL 167
+ R LL
Sbjct: 117 AFERIGLL 124
>gi|223935716|ref|ZP_03627632.1| CheA signal transduction histidine kinase [bacterium Ellin514]
gi|223895724|gb|EEF62169.1| CheA signal transduction histidine kinase [bacterium Ellin514]
Length = 1084
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ S R++I L+ + V DGL A E L+ P + LVLT++E+P + GF
Sbjct: 964 ILVVDDSLSVRKVIEKHLKALHFNVELAIDGLDALEKLRNVP--VSLVLTDLEMPRMHGF 1021
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
L+ + H+ +PVI+++ D+ L GA D++IKP R +L H
Sbjct: 1022 ELIAEIRRHESFHAVPVIVVTSRDAEKHRLHAASLGANDYIIKPFSREQLAERIDH 1077
>gi|188587839|ref|YP_001922138.1| response regulator [Clostridium botulinum E3 str. Alaska E43]
gi|188498120|gb|ACD51256.1| response regulator [Clostridium botulinum E3 str. Alaska E43]
Length = 218
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M + VL++E D++ +I L GY+ + DGL A+ LK P DL+L ++ LP
Sbjct: 1 MKINVLIIEDDEAISNLIKINLSMVGYQSKQLFDGLEAFNLLKEEP--FDLILMDIMLPG 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+ GF L+ + + NIPVI ++ + ++ + + GA D+++KP EL +
Sbjct: 59 MDGFELMKKIKD----LNIPVIFLTAKNGLADKVTGLKSGAEDYIVKPFETVELLARIEI 114
Query: 160 VWRRHS 165
V RR+S
Sbjct: 115 VLRRYS 120
>gi|318061543|ref|ZP_07980264.1| two-component system response regulator [Streptomyces sp. SA3_actG]
Length = 240
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL VE DD R+ L + G+RV AVPDGL E+ R + D+ L +V +P + G
Sbjct: 12 RVLFVEDDDVIREATQLALERVGFRVTAVPDGLQGLESF--RAGAPDIALLDVMVPGMDG 69
Query: 103 FALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
+L + + +PVIM+S DSI +VL + GA D++ KP + L + V
Sbjct: 70 VSLCRRIRDE---STVPVIMLSARADSIDVVL-GLEAGADDYVTKPFDVSVLVARLRAVM 125
Query: 162 RRHSLLGGHVPQ 173
RR GG Q
Sbjct: 126 RRFGHAGGGARQ 137
>gi|381157615|ref|ZP_09866849.1| PAS domain S-box [Thiorhodovibrio sp. 970]
gi|380881478|gb|EIC23568.1| PAS domain S-box [Thiorhodovibrio sp. 970]
Length = 1502
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVLL E D RQI + LL G RV DG A E L P + DLVL ++++P + G
Sbjct: 1126 RVLLAEDQDINRQIATELLESIGLRVTTANDGREALEHLTAEPDAFDLVLMDLQMPVMDG 1185
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
F + +P++ M+ H + +C+ G D L KP+ + L W
Sbjct: 1186 FEATRQIRADARWAELPIVAMTAHAMSAERQRCLAAGMNDHLAKPIDIDALHAALVR-WI 1244
Query: 163 RHSLLGGHVPQNLHDVYHKGGAISENNMASS 193
+ +P ++ D G A +E M S+
Sbjct: 1245 APAGASMPIPASVADKVAMGEAAAETPMPSA 1275
>gi|326518312|dbj|BAJ88185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 18/148 (12%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPH----------------S 87
++ DDS R++I LL+ ++V V G A + L +
Sbjct: 56 VLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDASISSVHADQLDVEVN 115
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL + E ++IPV++MS + S + +C+ +GA +F +KP
Sbjct: 116 VNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRINRCLEEGANEFFLKP 175
Query: 148 VRRNELRNLWQHVWRRHSLLGGHVPQNL 175
VR +++ L H+ + H Q+L
Sbjct: 176 VRLSDMSKLKPHIMKSRCKEHSHEDQDL 203
>gi|297849384|ref|XP_002892573.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
gi|297338415|gb|EFH68832.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------IDLVLTE 94
++ DDS R +I LLR +V AV G A E L +DL++T+
Sbjct: 33 VLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITD 92
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+P ++G+ LL + E + +PV++MS + ++ + +C+ +GA DFL+KPV+ +++
Sbjct: 93 YCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVK 152
Query: 155 NLWQHVWRRHSLLGGH 170
L H+ + L G+
Sbjct: 153 RLRNHLTKDVKLSNGN 168
>gi|117923557|ref|YP_864174.1| response regulator receiver protein [Magnetococcus marinus MC-1]
gi|117607313|gb|ABK42768.1| response regulator receiver protein [Magnetococcus marinus MC-1]
Length = 309
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++LLV+ +I+S LR GYR+ DG AWE L+ P + +L + +P + G
Sbjct: 5 QILLVDDQPINLEILSEYLRDEGYRLCIARDGQEAWELLEKNPLNFHALLLDRMMPRMDG 64
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+L + +HD + +PVIM + S +++ + GA +L KP R+ LR +
Sbjct: 65 MEVLARMKQHDELRMVPVIMQTAKASQEEIVEGLEGGAHYYLTKPYRKEMLRAI 118
>gi|167628800|ref|YP_001679299.1| sigma-54 dependent response regulator [Heliobacterium modesticaldum
Ice1]
gi|167591540|gb|ABZ83288.1| sigma-54 dependent response regulator [Heliobacterium modesticaldum
Ice1]
Length = 516
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---IDLVLTEVELP 98
LR+L+ + +++ R +SA L + G+RV AV DG +A E + S L L ++++P
Sbjct: 5 LRLLVADDEEAMRLFLSAALERAGHRVDAVEDGQSALEKIVAAERSKAPYALALIDLQMP 64
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+ G LL+ + +PVI+++ H SI ++ M GAADFL+KP+
Sbjct: 65 RLPGMDLLSHIRRE--WPRLPVIILTAHGSIPTAVEAMKLGAADFLVKPL 112
>gi|389721425|ref|ZP_10188177.1| chemotaxis protein histidine kinase [Acinetobacter sp. HA]
gi|388608721|gb|EIM37917.1| chemotaxis protein histidine kinase [Acinetobacter sp. HA]
Length = 1499
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPSISG 102
V++V+ + R++ S LL + GY + DG+ A E L+ RP DL+L ++E+P + G
Sbjct: 1379 VMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRP---DLMLLDIEMPRMDG 1435
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F ++ LV HD+ +N+P+IM++ + G ++ KP + EL
Sbjct: 1436 FEVINLVRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAEL 1486
>gi|374996960|ref|YP_004972459.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfosporosinus orientis DSM 765]
gi|357215326|gb|AET69944.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfosporosinus orientis DSM 765]
Length = 231
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLLV+ D S ++++ A L K GY G AA E L+ + +D V+ +V LP++ G+
Sbjct: 6 VLLVDDDPSIQKLLKAALEKNGYTTMPCSSGEAALEKLE--QNDLDAVILDVVLPNMDGW 63
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+L + + K++PVIM++ DS + + GA D+L KPVR +EL
Sbjct: 64 DVLKWIRNYPSYKHLPVIMLTCKDSEIETVLGLEMGADDYLSKPVRYHEL 113
>gi|162458152|ref|NP_001104849.1| cytokinin response regulator2 [Zea mays]
gi|5689236|dbj|BAA82873.1| ZmRR2 [Zea mays]
gi|6009897|dbj|BAA85113.1| response regulator 2 [Zea mays]
Length = 157
Score = 67.0 bits (162), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSISG 102
VL V+ R +I+ +LR YRV V A E L +++++T+ +P ++G
Sbjct: 39 VLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLALGLVPDVNMIITDYWMPGMTG 98
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+ LL V E + IPV++MS + + + +C+ +GA DFL+KPVR ++ L
Sbjct: 99 YELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADVSRL 152
>gi|356554487|ref|XP_003545577.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 379
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L V+ ++ D ++ L+ KC Y V + L+ + DL++++V +P +
Sbjct: 80 LCVVAIDDDQMCLTVLENLIHKCHYNVTTTNQAIKVLXMLRKNINKFDLLISDVNIPDMD 139
Query: 102 GFALLTLVMEHDVCKNIPVI--MMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
GF LL LV + ++P I + L+ + + +++GA ++L KP+R EL+N+W+H
Sbjct: 140 GFKLLELV---GLQMDLPFITKIKHLYSVFTFIQLDVIQGACEYLTKPIRIEELQNIWKH 196
Query: 160 VWR 162
V R
Sbjct: 197 VLR 199
>gi|302804881|ref|XP_002984192.1| type A response regulator [Selaginella moellendorffii]
gi|300148041|gb|EFJ14702.1| type A response regulator [Selaginella moellendorffii]
Length = 278
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL----------KCRPH----S 87
+ VL V+ R+++ LL+ Y+V V A E L H
Sbjct: 8 IHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLAIK 67
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
I+L++T+ +P ++G+ LL V E K IPV++MS + + CM +GA +F++KP
Sbjct: 68 INLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKP 127
Query: 148 VRRNELRNLWQHVWR 162
+R +++ L H+ R
Sbjct: 128 LRVADVKRLRSHIQR 142
>gi|242072820|ref|XP_002446346.1| hypothetical protein SORBIDRAFT_06g014570 [Sorghum bicolor]
gi|241937529|gb|EES10674.1| hypothetical protein SORBIDRAFT_06g014570 [Sorghum bicolor]
Length = 613
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R A L K+R K+KDR + KKVRYQSRK LA+QRPR +GQFV+Q
Sbjct: 557 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 600
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAV 71
WE FL + + VLLVE+DD TR+++SALLR C Y+V +
Sbjct: 49 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVNPI 87
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 116 KNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNL 175
K I V+++ D V+ +L+ + + P+R+NEL+NLWQH Q
Sbjct: 56 KTINVLLVESDDCTRRVVSALLRHCM-YQVNPIRKNELKNLWQHS---SGSGSESGIQTQ 111
Query: 176 HDVYHKGGAISENNMASSHSSDYAA 200
KGG S NN S+ S D A
Sbjct: 112 KCGKSKGGKESGNNSGSNDSHDNEA 136
>gi|344173071|emb|CCA85741.1| putative response regulator, CheY family [Ralstonia syzygii R24]
Length = 236
Score = 67.0 bits (162), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+LL+E D + I A L + G+RV AV DG+ A E L + H DLV+ ++ LP I
Sbjct: 1 MRILLIEDDRAIASGIHAGLTQVGHRVLAVHDGVFAVEHLARQSH--DLVILDLGLPGID 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL+ D ++ PV++++ D + + + GA D+L+KP EL Q +
Sbjct: 59 GMTLLSQYRARD--RSTPVLILTARDRLQDKVGGLNAGADDYLLKPFEMLELVARVQALL 116
Query: 162 RRHSLLGGHVPQ 173
RR G +P+
Sbjct: 117 RRRGDNGEPMPR 128
>gi|291435241|ref|ZP_06574631.1| PAS/PAC sensor hybrid histidine kinase [Streptomyces ghanaensis
ATCC 14672]
gi|291338136|gb|EFE65092.1| PAS/PAC sensor hybrid histidine kinase [Streptomyces ghanaensis
ATCC 14672]
Length = 1385
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+ + + R+ ++ LL GY+V V DGLAA + + R H+ DLV+++V +P + G
Sbjct: 637 RLLVADDNADMREYLARLLHSAGYQVDTVKDGLAALQAV--RAHAPDLVISDVMMPGLDG 694
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP---------VRRN-E 152
L+ + ++PV+++S ++ + GA D+L+KP VR N E
Sbjct: 695 LGLVAALRADPRTASVPVVLLSARAGQEASIEGLQAGADDYLVKPFAAAELLARVRANVE 754
Query: 153 LRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYA 199
L L H R + L + Q V + GA+ E N A + YA
Sbjct: 755 LARLRNHQARWRTALVDSL-QEAFFVCDEHGAVVEINAAFTDILGYA 800
>gi|357482307|ref|XP_003611439.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512774|gb|AES94397.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 543
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 15/132 (11%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+ F P+ LRVLL+E D+++ I L Y V+ + A + P + +
Sbjct: 11 WKDF-PKG-LRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAI 68
Query: 93 TEVELPSIS----GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
EV SIS GF L + K++P IM S I+ ++KC+ GA +FL KP+
Sbjct: 69 VEV---SISCPDGGFKFL------ENAKDLPTIMTSNSQCINTMMKCIALGAVEFLTKPL 119
Query: 149 RRNELRNLWQHV 160
++L+N+WQHV
Sbjct: 120 SEDKLKNIWQHV 131
>gi|357482309|ref|XP_003611440.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512775|gb|AES94398.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 548
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 15/132 (11%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
W+ F P+ LRVLL+E D+++ I L Y V+ + A + P + +
Sbjct: 11 WKDF-PKG-LRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAI 68
Query: 93 TEVELPSIS----GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
EV SIS GF L + K++P IM S I+ ++KC+ GA +FL KP+
Sbjct: 69 VEV---SISCPDGGFKFL------ENAKDLPTIMTSNSQCINTMMKCIALGAVEFLTKPL 119
Query: 149 RRNELRNLWQHV 160
++L+N+WQHV
Sbjct: 120 SEDKLKNIWQHV 131
>gi|428319185|ref|YP_007117067.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
gi|428242865|gb|AFZ08651.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
Length = 352
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ ++ R +++ L++ G+ V DGL A E L+ P DLVL ++ +P ++G+
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRRDPF--DLVLLDIMMPQMNGY 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+L + + + IPVIM+S D I +++C+ GA D+L KP
Sbjct: 66 QVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|83310215|ref|YP_420479.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
gi|82945056|dbj|BAE49920.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
Length = 537
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVL+ + + R ++ L + G++V AV DGLAA E + + + DLVL ++ +P ++G
Sbjct: 160 RVLVADDSKANRDVLVRYLSREGHQVVAVADGLAAVEAVFGQ--AFDLVLLDMIMPGMNG 217
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+L + +++PVIM+S D + +++C+ GA D+L KP R LR
Sbjct: 218 DEVLKAIKADSRLRSLPVIMISALDGLDSIVRCIEAGAEDYLPKPFNRVLLR 269
>gi|346703189|emb|CBX25288.1| hypothetical_protein [Oryza brachyantha]
Length = 200
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH--------------S 87
VL V+ R++I LL+ ++V V G A E L H +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHGHEDSPISVQADQQEAA 68
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL + E ++IPV++MS + S + +C+ +GA +F +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 128
Query: 148 VRRNELRNLWQHVWR 162
VR +++ L H+ +
Sbjct: 129 VRLSDMSKLKPHILK 143
>gi|224086847|ref|XP_002307983.1| type-a response regulator [Populus trichocarpa]
gi|222853959|gb|EEE91506.1| type-a response regulator [Populus trichocarpa]
Length = 233
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 22/139 (15%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKC-------------------- 83
++ DDS R++I LL+ Y+V AV G A + L
Sbjct: 13 VLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDHSNPDTVPSVSPNDH 72
Query: 84 RPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADF 143
R ++L++T+ +P ++G+ LL V E ++IPV++MS + S + +C+ +GA +F
Sbjct: 73 REVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLEEGAEEF 132
Query: 144 LIKPVRRNELRNLWQHVWR 162
+KPVR +L L H+ +
Sbjct: 133 FLKPVRLADLNRLKPHMMK 151
>gi|169794846|ref|YP_001712639.1| sensor histidine kinase/response regulator; protein of chemotactic
signal transduction system (ChA-like) [Acinetobacter
baumannii AYE]
gi|213157827|ref|YP_002320625.1| type IV pilus hybrid sensor kinase/response regulator PilL
[Acinetobacter baumannii AB0057]
gi|215482393|ref|YP_002324575.1| ChpA [Acinetobacter baumannii AB307-0294]
gi|301512075|ref|ZP_07237312.1| ChpA [Acinetobacter baumannii AB058]
gi|301596435|ref|ZP_07241443.1| ChpA [Acinetobacter baumannii AB059]
gi|332852300|ref|ZP_08434105.1| Hpt domain protein [Acinetobacter baumannii 6013150]
gi|332870523|ref|ZP_08439287.1| Hpt domain protein [Acinetobacter baumannii 6013113]
gi|417571824|ref|ZP_12222678.1| Hpt domain protein [Acinetobacter baumannii Canada BC-5]
gi|421623696|ref|ZP_16064579.1| Hpt domain protein [Acinetobacter baumannii OIFC074]
gi|421644694|ref|ZP_16085170.1| Hpt domain protein [Acinetobacter baumannii IS-235]
gi|421648866|ref|ZP_16089264.1| Hpt domain protein [Acinetobacter baumannii IS-251]
gi|421659479|ref|ZP_16099697.1| Hpt domain protein [Acinetobacter baumannii Naval-83]
gi|421701144|ref|ZP_16140651.1| Hpt domain protein [Acinetobacter baumannii IS-58]
gi|421794711|ref|ZP_16230803.1| Hpt domain protein [Acinetobacter baumannii Naval-21]
gi|421800578|ref|ZP_16236552.1| Hpt domain protein [Acinetobacter baumannii Canada BC1]
gi|169147773|emb|CAM85636.1| putative sensor histidine kinase/response regulator; putative protein
of chemotactic signal transduction system (ChA-like)
[Acinetobacter baumannii AYE]
gi|213056987|gb|ACJ41889.1| type IV pilus hybrid sensor kinase/response regulator PilL
[Acinetobacter baumannii AB0057]
gi|213986150|gb|ACJ56449.1| ChpA [Acinetobacter baumannii AB307-0294]
gi|332729430|gb|EGJ60770.1| Hpt domain protein [Acinetobacter baumannii 6013150]
gi|332732260|gb|EGJ63528.1| Hpt domain protein [Acinetobacter baumannii 6013113]
gi|400207392|gb|EJO38362.1| Hpt domain protein [Acinetobacter baumannii Canada BC-5]
gi|404568022|gb|EKA73133.1| Hpt domain protein [Acinetobacter baumannii IS-58]
gi|408504582|gb|EKK06326.1| Hpt domain protein [Acinetobacter baumannii IS-235]
gi|408514824|gb|EKK16426.1| Hpt domain protein [Acinetobacter baumannii IS-251]
gi|408692720|gb|EKL38335.1| Hpt domain protein [Acinetobacter baumannii OIFC074]
gi|408707242|gb|EKL52530.1| Hpt domain protein [Acinetobacter baumannii Naval-83]
gi|410403067|gb|EKP55168.1| Hpt domain protein [Acinetobacter baumannii Naval-21]
gi|410407281|gb|EKP59268.1| Hpt domain protein [Acinetobacter baumannii Canada BC1]
Length = 1506
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPS 99
R L++ DDS R++ S LL + GY V DG+ A E L+ +P DL+L ++E+P
Sbjct: 1379 RRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKP---DLMLLDIEMPR 1435
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ GF +L LV HD+ + +P+IM++ + L G + ++ KP + EL
Sbjct: 1436 MDGFEVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFLLGVSQYMGKPFQEEEL 1489
>gi|386812842|ref|ZP_10100067.1| two-component response regulator [planctomycete KSU-1]
gi|386405112|dbj|GAB62948.1| two-component response regulator [planctomycete KSU-1]
Length = 464
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++L+VE D+ I LL K GY V +GL A R S DLV+ ++++P + G
Sbjct: 6 KILVVEDDEYVLGSIRILLNKEGYEVNTALNGLEALNL--YRRESYDLVIADLKMPQMDG 63
Query: 103 FALLT-LVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
LL L +E ++ +IMM+ + SI ++ M GA D++ KPV E+R + Q +
Sbjct: 64 IELLKQLKLEFS---DVSLIMMTAYGSIRTAVEAMKMGAYDYVTKPVSAEEIRLVIQRAF 120
Query: 162 RRHSLL 167
R +L+
Sbjct: 121 ERQNLI 126
>gi|449458817|ref|XP_004147143.1| PREDICTED: uncharacterized protein LOC101203501 [Cucumis sativus]
Length = 607
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGY-----RVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
L VLLV+ D + + +++LL + Y + A ++ + DLV+ V
Sbjct: 19 LHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVMANVS 78
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+P + F+ L ++++ NI VI MS ++S+ K + +GA FL KP+ R +L+ +
Sbjct: 79 MPDMDSFSFLHVLLK----MNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKYM 134
Query: 157 WQHVWR 162
WQHV+R
Sbjct: 135 WQHVYR 140
>gi|301347333|ref|ZP_07228074.1| ChpA [Acinetobacter baumannii AB056]
Length = 1099
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPS 99
R L++ DDS R++ S LL + GY V DG+ A E L+ +P DL+L ++E+P
Sbjct: 972 RRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKP---DLMLLDIEMPR 1028
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ GF +L LV HD+ + +P+IM++ + L G + ++ KP + EL
Sbjct: 1029 MDGFEVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFLLGVSQYMGKPFQEEEL 1082
>gi|402849601|ref|ZP_10897829.1| Acetoacetate metabolism regulatory protein AtoC [Rhodovulum sp.
PH10]
gi|402500078|gb|EJW11762.1| Acetoacetate metabolism regulatory protein AtoC [Rhodovulum sp.
PH10]
Length = 470
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ D++ R +++A+L K G V+ DG+ A ET R H D+VL ++ +P +G
Sbjct: 8 VLVVDDDEAIRHMLTAVLGKEGVAVSVAADGVEATET--YRRHHQDVVLMDIRMPRRNGL 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+ ++E D + VI+M+ + + M GA D++IKP E+R L +
Sbjct: 66 EAMKAILEID--RGAAVILMTAFAEVGTAVTAMKDGAFDYVIKPFDIEEIRVLVRRALEI 123
Query: 164 HSLLGGHVP--QNLHDVYHKGGAISEN 188
S+ + Q L + Y G +++N
Sbjct: 124 RSMRADIISLRQELAERYGAEGILTDN 150
>gi|405979547|ref|ZP_11037890.1| hypothetical protein HMPREF9241_00613 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391963|gb|EJZ87024.1| hypothetical protein HMPREF9241_00613 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 224
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 47 VEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLVLTEVELPSISGFAL 105
VE D STR I LR G+ + DG + WE L K RP LV+ +V LP I G L
Sbjct: 5 VEDDASTRDIEVHTLRATGFEARSFDDGTSFWEALQKERPQ---LVVLDVMLPGIDGIEL 61
Query: 106 LTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHS 165
L + K++PVIM + +K + GA D+L+KP EL + + V RR
Sbjct: 62 LRRMRASSTLKDLPVIMATAKGQEFDKIKTLDMGADDYLVKPFSVLELVSRVKAVLRRTE 121
Query: 166 LLGGHVPQNLHDVYHKG 182
P L DV+ G
Sbjct: 122 ------PDRLADVFTHG 132
>gi|224137712|ref|XP_002322625.1| type-a response regulator [Populus trichocarpa]
gi|222867255|gb|EEF04386.1| type-a response regulator [Populus trichocarpa]
Length = 227
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 20/137 (14%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCR---------PH-------- 86
++ DDS R++I LL+ Y+V V G A + L + P+
Sbjct: 13 VLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNPDTPYVSPNNHQE 72
Query: 87 -SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
++L++T+ +P ++G+ LL V E +NIPV++MS + S + +C+ +GA +F +
Sbjct: 73 MEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFL 132
Query: 146 KPVRRNELRNLWQHVWR 162
KPVR ++L L H+ +
Sbjct: 133 KPVRLSDLNRLKPHMMK 149
>gi|260439186|ref|ZP_05793002.1| DNA-binding response regulator VicR [Butyrivibrio crossotus DSM
2876]
gi|346308809|ref|ZP_08850914.1| hypothetical protein HMPREF9457_02623 [Dorea formicigenerans
4_6_53AFAA]
gi|417974663|ref|ZP_12615469.1| hypothetical protein ANHS_2160 [Lactobacillus ruminis ATCC 25644]
gi|292808388|gb|EFF67593.1| DNA-binding response regulator VicR [Butyrivibrio crossotus DSM
2876]
gi|345901888|gb|EGX71684.1| hypothetical protein HMPREF9457_02623 [Dorea formicigenerans
4_6_53AFAA]
gi|346328963|gb|EGX97276.1| hypothetical protein ANHS_2160 [Lactobacillus ruminis ATCC 25644]
Length = 223
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 1 MFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLD--KEYIDLIISDIMMPVM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 59 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 116
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 117 LRRAQILNEH 126
>gi|357477303|ref|XP_003608937.1| Two-component response regulator ARR5 [Medicago truncatula]
gi|355509992|gb|AES91134.1| Two-component response regulator ARR5 [Medicago truncatula]
Length = 214
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------IDLVL 92
L VL V+ R++I LL+ +V V A + L + ++L++
Sbjct: 26 LHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGENSDVAFDAVKVNLIM 85
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+ +P ++G+ LL + E V + IPV++MS + ++ + +C+ +GA DFL+KPV+ ++
Sbjct: 86 TDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSD 145
Query: 153 LRNLWQHVWR 162
+R L + R
Sbjct: 146 VRRLKDFIMR 155
>gi|443302653|gb|AGC82268.1| cAMP phosphodiesterase [Dictyostelium lacteum]
Length = 698
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 16/131 (12%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
RV ++ ADD R+I+ +L+K Y V +G AWE L+ DLVLT+V +P I
Sbjct: 87 RVHILVADDDVIQRKILENVLKKFHYNVH---NGEEAWECLEKGQVKYDLVLTDVMMPEI 143
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKC----MLKGAADFLIKPVRRNELR-- 154
+GF L T + H V IPVI+MS ++ KC + G DFL KP+ + L+
Sbjct: 144 NGFDLCTKINLHPVFNKIPVILMS---GTAVDYKCANDTIKIGGQDFLTKPIAKELLKKK 200
Query: 155 --NLWQHVWRR 163
L +W++
Sbjct: 201 IDTLLGSIWQK 211
>gi|125658123|gb|ABN48988.1| type A response regulator RR1 [Phaseolus vulgaris]
Length = 227
Score = 66.6 bits (161), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 15/142 (10%)
Query: 44 VLLVEADDS--TRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH-------------SI 88
V ++ DDS R++I LL+ +V AV G+ A + L +
Sbjct: 20 VHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVPSLKV 79
Query: 89 DLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
DL++T+ +P ++G+ LL + E + + IPV++MS + + + +C+ +GA DF++KPV
Sbjct: 80 DLIITDYCMPEMTGYELLKKIKESSMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPV 139
Query: 149 RRNELRNLWQHVWRRHSLLGGH 170
+ ++++ L ++ R +G H
Sbjct: 140 KLSDVKRLKGYMTTREVKVGSH 161
>gi|398804225|ref|ZP_10563224.1| adenylate/guanylate cyclase family protein,protein kinase family
protein [Polaromonas sp. CF318]
gi|398094545|gb|EJL84906.1| adenylate/guanylate cyclase family protein,protein kinase family
protein [Polaromonas sp. CF318]
Length = 690
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSISG 102
+L+VE DD+ R I LL+ G+ A+ PDGL + RP DL++++V +P ++G
Sbjct: 4 ILIVEDDDAIRSNIVRLLKLEGFETASAPDGLQGLALARASRP---DLIISDVGMPGMNG 60
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL V N P ++++ D + + M GA D+L KP R EL
Sbjct: 61 FELLATVRADRELANTPFMLLTALDDRDSMRRGMTAGADDYLSKPFSRAEL 111
>gi|441499875|ref|ZP_20982047.1| GAF sensor hybrid histidine kinase [Fulvivirga imtechensis AK7]
gi|441436335|gb|ELR69707.1| GAF sensor hybrid histidine kinase [Fulvivirga imtechensis AK7]
Length = 576
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L++L+VE ++ + +I +LL K V PDGLAA + LK + DL+L ++++P++
Sbjct: 453 LKILVVEDNELNQFLIQSLLVKYKAIVDVTPDGLAALDALKNNHY--DLILMDIQMPNMD 510
Query: 102 GF-ALLTLVMEHDVCKN-IPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
G+ A + D KN IP++ M+ H + KC+ G D++ KP++ EL N
Sbjct: 511 GYEATRKIRSTFDEGKNKIPIVAMTAHALVGEKEKCIEAGMDDYITKPIKVRELLNSIHR 570
Query: 160 VW 161
V
Sbjct: 571 VL 572
>gi|406895332|gb|EKD39927.1| hypothetical protein ACD_75C00243G0001 [uncultured bacterium]
Length = 713
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+LL E + +++ +L K GY+V VP+G AA ET P D +L ++++P +
Sbjct: 591 IRILLAEDNPVNQKLAMMMLSKAGYQVTVVPNGKAAVETFTGTPDGFDTILMDIQMPEMD 650
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN---ELRNLWQ 158
G+ T + + IP+I M+ + C G D+++KP++R ++ W
Sbjct: 651 GYE-ATRQIRRQGFREIPIIAMTANAMKGDKELCFAAGMNDYIMKPIKREIVFQILEKWL 709
Query: 159 HV 160
H+
Sbjct: 710 HI 711
>gi|153813051|ref|ZP_01965719.1| hypothetical protein RUMOBE_03459 [Ruminococcus obeum ATCC 29174]
gi|160894161|ref|ZP_02074939.1| hypothetical protein CLOL250_01715 [Clostridium sp. L2-50]
gi|149830853|gb|EDM85943.1| response regulator receiver domain protein [Ruminococcus obeum ATCC
29174]
gi|156864194|gb|EDO57625.1| response regulator receiver domain protein [Clostridium sp. L2-50]
Length = 236
Score = 66.6 bits (161), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
V ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 14 VFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGAQALEVLD--KEYIDLIISDIMMPVM 71
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + G+ D+++KPV NE+ +
Sbjct: 72 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFFSGSDDYMVKPVNVNEMVLRVGAL 129
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 130 LRRAQILNEH 139
>gi|94987584|ref|YP_595517.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|442556438|ref|YP_007366263.1| response regulator receiver protein [Lawsonia intracellularis N343]
gi|94731833|emb|CAJ55196.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|441493885|gb|AGC50579.1| response regulator receiver protein [Lawsonia intracellularis N343]
Length = 122
Score = 66.6 bits (161), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +L+V+ + R ++S + + GY+V DGL E L +DL+++++ +P
Sbjct: 1 MSKHILVVDDSKTVRNLMSFVFKSKGYQVTTAEDGLDGLEKLY-SVDKVDLIVSDINMPR 59
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL-RNL 156
+ GF + V E D+ +NIP+I++S + K M GA +++KP + + L RN+
Sbjct: 60 MDGFTFIKSVREQDLYRNIPIIILSTEKEDEDIKKGMKFGANLYMVKPAQPDTLVRNI 117
>gi|357126832|ref|XP_003565091.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 213
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 22/143 (15%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPH-------------- 86
R ++ DDS R++I LL+ Y+V V G A E L R
Sbjct: 10 RFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEGDSSSASSSPSSSS 69
Query: 87 ------SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGA 140
++L++T+ +P ++G+ LL V K+IPV++MS + + + +C+ GA
Sbjct: 70 PDHQEVDVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARINRCLEDGA 129
Query: 141 ADFLIKPVRRNELRNLWQHVWRR 163
+F +KPV+ +++ L H+ RR
Sbjct: 130 EEFFLKPVKLADMKKLKSHLLRR 152
>gi|449503419|ref|XP_004161993.1| PREDICTED: uncharacterized protein LOC101230585 [Cucumis sativus]
Length = 557
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGY-----RVAAVPDGLAAWETLKCRPHSIDLVLTEVE 96
L VLLV+ D + + +++LL + Y + A ++ + DLV+ V
Sbjct: 19 LHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVMANVS 78
Query: 97 LPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+P + F+ L ++++ NI VI MS ++S+ K + +GA FL KP+ R +L+ +
Sbjct: 79 MPDMDSFSFLHVLLK----MNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKYM 134
Query: 157 WQHVWR 162
WQHV+R
Sbjct: 135 WQHVYR 140
>gi|332531014|ref|ZP_08406934.1| two component transcriptional regulator [Hylemonella gracilis ATCC
19624]
gi|332039535|gb|EGI75941.1| two component transcriptional regulator [Hylemonella gracilis ATCC
19624]
Length = 243
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+LLVE D+ R +S LL + G+R DGL+A + L ++D VL ++ LP I G
Sbjct: 4 ILLVEDDELLRDSVSDLLVQAGHRTLTCADGLSAQQQLST--EAVDAVLLDLGLPGIDGM 61
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+LL + E +++PV++++ DSI ++ ++ GA D++ KP EL Q + RR
Sbjct: 62 SLLRWIRER--FESLPVLILTARDSIDHRVEGLMAGADDYMTKPFGNAELSARLQALLRR 119
Query: 164 HSL 166
L
Sbjct: 120 ARL 122
>gi|356562781|ref|XP_003549647.1| PREDICTED: two-component response regulator ARR5-like isoform 2
[Glycine max]
Length = 213
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWE---------TLKC-------RP 85
L VL V+ R++I LL+ +V V G A + +L C +
Sbjct: 26 LHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGCLFDWLWLQS 85
Query: 86 HSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
++L++T+ +P ++G+ LL + E V + IPV++MS + ++ + +C+ +GA DFL+
Sbjct: 86 VKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLL 145
Query: 146 KPVRRNELRNL 156
KPV+ +++R L
Sbjct: 146 KPVKLSDVRRL 156
>gi|297810093|ref|XP_002872930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318767|gb|EFH49189.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 369
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLL+++D + +S ++RKCGYRV A + + IDLVL + L ++ +
Sbjct: 16 VLLLDSDATCLANLSEMIRKCGYRVVATTRAEDLPLIINNKDKKIDLVLADFRLIEMNKY 75
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL + +C+ IPV++ + ++V +C+ +GA L KP + N+L+ LWQ RR
Sbjct: 76 ELLEKI--RLICE-IPVVVSDAYVKDAIV-ECLCRGAKLCLEKPFKENDLKLLWQFTVRR 131
Query: 164 H 164
Sbjct: 132 Q 132
>gi|451982200|ref|ZP_21930525.1| Transcriptional regulatory protein pilR [Nitrospina gracilis 3/211]
gi|451760572|emb|CCQ91807.1| Transcriptional regulatory protein pilR [Nitrospina gracilis 3/211]
Length = 466
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++L+VE + S R +++ +L K G+ V +G A + + + H D+VLT++ +P +G
Sbjct: 3 KILIVENEKSMRDLLTIVLEKDGHEVETARNGEVAVDMI--QDHQYDVVLTDINMPRANG 60
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
+L V + V PVIMM+ + S ++ M KGA D+L KP + EL+ + ++
Sbjct: 61 IDVLDAV--NHVLPGTPVIMMTAYASAETAVETMKKGAYDYLSKPFKIEELQLIIKNAAE 118
Query: 163 RHSLL--GGHVPQNLHDVYHKGGAISE-----------NNMASSHSSDYAASSQKNKGSE 209
+ L ++ L D Y I + N +A+S+++ + G E
Sbjct: 119 KKRLADENTYLKSALKDKYQFANIIGKSEGMRQVFDYINKVANSNAT-VLIGGESGTGKE 177
Query: 210 KVSDA---QSSRTSSPYL 224
V+ A S+R + P++
Sbjct: 178 LVAKALHFNSNRKNYPFI 195
>gi|427719530|ref|YP_007067524.1| PAS/PAC sensor hybrid histidine kinase [Calothrix sp. PCC 7507]
gi|427351966|gb|AFY34690.1| PAS/PAC sensor hybrid histidine kinase [Calothrix sp. PCC 7507]
Length = 1934
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LLVE + R + LL Y V V DG+AA + R H DLVL++V +P + G
Sbjct: 629 RILLVENNADMRNYVKQLLVSQQYEVETVTDGVAALAAM--RQHRPDLVLSDVMMPRMDG 686
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL + + IP+I++S L+ + GA D+LIKP EL
Sbjct: 687 FELLRSLRSDPATREIPMIVLSARAGEESRLEGLQAGADDYLIKPFSAREL 737
>gi|370988687|dbj|BAL43557.1| type-A response regulator [Petunia x hybrida]
Length = 227
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 20/137 (14%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------------- 87
++ DDS R++I LL+ +V V G A E L + H
Sbjct: 12 VLAVDDSLIDRKLIERLLKTSSCQVTTVDSGSKALEFLGLQEHEQNKSNQPCVSLDNHQE 71
Query: 88 --IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
I+L++T+ +P ++G+ LL + E +NIPV++MS + S + +C+ +GA +F +
Sbjct: 72 AEINLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFL 131
Query: 146 KPVRRNELRNLWQHVWR 162
KPVR +++ L H+ +
Sbjct: 132 KPVRLSDVNKLRPHMMK 148
>gi|15218550|ref|NP_172517.1| two-component response regulator ARR4 [Arabidopsis thaliana]
gi|51315817|sp|O82798.1|ARR4_ARATH RecName: Full=Two-component response regulator ARR4; AltName:
Full=Response regulator 1
gi|5091539|gb|AAD39568.1|AC007067_8 T10O24.8 [Arabidopsis thaliana]
gi|3273196|dbj|BAA31143.1| responce regulator1 [Arabidopsis thaliana]
gi|3323583|gb|AAC26636.1| two-component response regulator homolog [Arabidopsis thaliana]
gi|3953597|dbj|BAA34726.1| response regulator 4 [Arabidopsis thaliana]
gi|87116590|gb|ABD19659.1| At1g10470 [Arabidopsis thaliana]
gi|110740750|dbj|BAE98474.1| putative response regulator 3 [Arabidopsis thaliana]
gi|332190462|gb|AEE28583.1| two-component response regulator ARR4 [Arabidopsis thaliana]
Length = 259
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------IDLVLTE 94
++ DDS R +I LLR +V AV G A E L +DL++T+
Sbjct: 36 VLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITD 95
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+P ++G+ LL + E + +PV++MS + ++ + +C+ +GA DFL+KPV+ +++
Sbjct: 96 YCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVK 155
Query: 155 NLWQHVWRRHSLLGGH 170
L H+ + L G+
Sbjct: 156 RLRSHLTKDVKLSNGN 171
>gi|413961296|ref|ZP_11400524.1| transcriptional regulator [Burkholderia sp. SJ98]
gi|413930168|gb|EKS69455.1| transcriptional regulator [Burkholderia sp. SJ98]
Length = 220
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVLLVE D + + LR GY V V DG A TL H D +L ++ LP
Sbjct: 1 MRVLLVEDDRMIGESVQNELRDGGYAVDWVRDGKLALTTLNT--HVYDAILLDLGLPGAD 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GFA+L V ++P+I+++ DS+ ++ + +GA D+LIKP +EL+ + V
Sbjct: 59 GFAVLRAVRSG--ANHVPLIIVTARDSVDERIRGLDEGADDYLIKPFDISELKARMRAVI 116
Query: 162 RR 163
RR
Sbjct: 117 RR 118
>gi|115461262|ref|NP_001054231.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|32488053|emb|CAE03227.1| OSJNBa0018M05.2 [Oryza sativa Japonica Group]
gi|70663953|emb|CAJ14992.1| OSJNBb0004A17.17 [Oryza sativa Japonica Group]
gi|71273485|emb|CAI79410.1| Type A response regulator 6 [Oryza sativa Indica Group]
gi|87116376|dbj|BAE79347.1| typeA response regulator 6 [Oryza sativa Japonica Group]
gi|113565802|dbj|BAF16145.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|118790854|tpd|FAA00267.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125592032|gb|EAZ32382.1| hypothetical protein OsJ_16592 [Oryza sativa Japonica Group]
gi|215765394|dbj|BAG87091.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 170
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCR--PHSIDLVLTEVELPS 99
+ VL V+ R +I+ +LR YRV V A E L C ++++++T+ +P
Sbjct: 50 MHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELL-CLGLVPNVNMIITDYWMPG 108
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
++G+ LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ L
Sbjct: 109 MTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRLCSR 168
Query: 160 V 160
+
Sbjct: 169 I 169
>gi|399021871|ref|ZP_10723960.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Herbaspirillum sp. CF444]
gi|398090394|gb|EJL80869.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Herbaspirillum sp. CF444]
Length = 220
Score = 66.2 bits (160), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVLLVE D Q I LR Y V V DG AA +K + + + VL ++ LP +
Sbjct: 1 MRVLLVEDDKMIAQAIEQALRDAAYAVDWVNDGRAAQTAIKAQEYGV--VLLDLGLPHLD 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF +L + + +V +PV++++ D++ ++ + GA D++IKP EL + V
Sbjct: 59 GFEVLRHIRQSEV--PVPVLIITARDALEDRIRGLDGGADDYVIKPFEMGELLARMRAVL 116
Query: 162 RRHSLLGGHVPQN 174
RR+ G + N
Sbjct: 117 RRNGGSGNPILTN 129
>gi|440797406|gb|ELR18493.1| multisensor hybrid histidine [Acanthamoeba castellanii str. Neff]
Length = 1015
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
+VLL + + R+ ++ LL Y V +V +GL A L+ ++DLVLT+V +P + G
Sbjct: 82 KVLLADDNFDMREYVARLL-APKYEVISVSNGLEALSVLRAHSQAVDLVLTDVMMPFLDG 140
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL + D + +PVIM+S ++ + +GA D+L KP EL
Sbjct: 141 FGLLKEIRAKDQTRTLPVIMLSARAGEEASVEGLDEGADDYLTKPFTAREL 191
>gi|309951238|emb|CBX43989.1| putative A-type response regulator 7 [Populus x canadensis]
Length = 227
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 20/137 (14%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL------KCRPHS---------- 87
++ DDS R++I LL+ Y+V V G A + L + P +
Sbjct: 13 VLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNPDTPFVSPNNHQE 72
Query: 88 --IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
++L++T+ +P ++G+ LL V E +NIPV++MS + S + +C+ +GA +F +
Sbjct: 73 VEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFL 132
Query: 146 KPVRRNELRNLWQHVWR 162
KPVR ++L L H+ +
Sbjct: 133 KPVRLSDLNRLKPHMMK 149
>gi|154252497|ref|YP_001413321.1| two component sigma-54 specific Fis family transcriptional
regulator [Parvibaculum lavamentivorans DS-1]
gi|154156447|gb|ABS63664.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Parvibaculum lavamentivorans DS-1]
Length = 511
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS-IDLVLTEVELP 98
M +L+V+ D + R+I+ ++ + GYR V G AA L+ + I LV+ ++ +P
Sbjct: 1 MTQAILIVDDDPAQRRILEEVVNRDGYRAIPVDGGEAALAYLEGPGGAEISLVILDLVMP 60
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
I G +L V H N+PVI+++ H I V+ M +GA+DF++KPV L
Sbjct: 61 GIDGMEVLKRV--HPNKPNLPVIVLTAHGGIETVVNVMREGASDFVVKPVSPERL----- 113
Query: 159 HVWRRHSL 166
HV R++L
Sbjct: 114 HVSMRNAL 121
>gi|325107081|ref|YP_004268149.1| response regulator receiver protein [Planctomyces brasiliensis DSM
5305]
gi|324967349|gb|ADY58127.1| response regulator receiver protein [Planctomyces brasiliensis DSM
5305]
Length = 121
Score = 66.2 bits (160), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGY-RVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +LLV+ +TR I L GY + PDG AA T +P ID++ T+ +P +
Sbjct: 1 MNILLVDDSSTTRLIAKKTLSSLGYDSIFEAPDGAAALRTFTEKP--IDVIFTDWNMPIM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR---NLW 157
+G LL + D +N+PVIM++ S + VL+ + G D+L+KP L+ + W
Sbjct: 59 NGLELLRQIRAID--QNVPVIMITTEGSRAKVLEAIQNGVNDYLVKPFTPQALKEKLSKW 116
Query: 158 QHV 160
HV
Sbjct: 117 VHV 119
>gi|218134349|ref|ZP_03463153.1| hypothetical protein BACPEC_02242 [[Bacteroides] pectinophilus ATCC
43243]
gi|217989734|gb|EEC55745.1| response regulator receiver domain protein [[Bacteroides]
pectinophilus ATCC 43243]
Length = 223
Score = 66.2 bits (160), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 1 MFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGALALEILD--KEYIDLIISDIMMPVM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 59 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 116
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 117 LRRAQILNEH 126
>gi|163814357|ref|ZP_02205746.1| hypothetical protein COPEUT_00508 [Coprococcus eutactus ATCC 27759]
gi|347533022|ref|YP_004839785.1| hypothetical protein RHOM_13735 [Roseburia hominis A2-183]
gi|347533317|ref|YP_004840080.1| hypothetical protein RHOM_15210 [Roseburia hominis A2-183]
gi|158449992|gb|EDP26987.1| response regulator receiver domain protein [Coprococcus eutactus
ATCC 27759]
gi|345503170|gb|AEN97853.1| hypothetical protein RHOM_13735 [Roseburia hominis A2-183]
gi|345503465|gb|AEN98148.1| hypothetical protein RHOM_15210 [Roseburia hominis A2-183]
Length = 223
Score = 66.2 bits (160), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ ++L+VE D Q+ +L K GY+V + DG A E L IDL+++++ +P +
Sbjct: 1 MFQILIVEDDKELSQLFQKVLEKNGYQVKSASDGALALEILD--KEYIDLIISDIMMPVM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
G+ L++ + IPV+M++ S + + L G+ D+++KPV NE+ +
Sbjct: 59 DGYELVSEL--RSAGYQIPVLMITAKGSFDDMRQGFLSGSDDYMVKPVNVNEMVLRVGAL 116
Query: 161 WRRHSLLGGH 170
RR +L H
Sbjct: 117 LRRAQILNEH 126
>gi|218438945|ref|YP_002377274.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7424]
gi|218171673|gb|ACK70406.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7424]
Length = 1383
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LL + + R+ + LL + Y V V DG+AA E + R H DLVL++V +P ++G
Sbjct: 631 RILLADDNGDMREYVKRLLSQY-YEVETVADGIAALEAI--RRHPPDLVLSDVMMPRLNG 687
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL + + + + +P+I++S +++ + GA D+L+KP EL
Sbjct: 688 FELLQELRRNPLTEELPIILLSARAGEESLVEGLKSGADDYLVKPFSAREL 738
>gi|319789306|ref|YP_004150939.1| two component transcriptional regulator, winged helix family
[Thermovibrio ammonificans HB-1]
gi|317113808|gb|ADU96298.1| two component transcriptional regulator, winged helix family
[Thermovibrio ammonificans HB-1]
Length = 223
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVLLVE DDS ++++ L+ GY V V DGL A E LK R + D+++ ++ LP ++G
Sbjct: 3 RVLLVEDDDSIGELVTYYLKNKGYDVEWVQDGLEARELLKSRKY--DIIVLDLMLPGVNG 60
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
L V + K+ P+I+++ + + GA D++ KP EL + V R
Sbjct: 61 LDLCREVRLRGINKDTPIIVLTAIGDEDTKVHGLEAGADDYVTKPFSIKELLARIEAVLR 120
Query: 163 R 163
R
Sbjct: 121 R 121
>gi|302875761|ref|YP_003844394.1| two component transcriptional regulator, winged helix family
[Clostridium cellulovorans 743B]
gi|307689195|ref|ZP_07631641.1| two component transcriptional regulator, winged helix family
protein [Clostridium cellulovorans 743B]
gi|302578618|gb|ADL52630.1| two component transcriptional regulator, winged helix family
[Clostridium cellulovorans 743B]
Length = 224
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ VL+VE D R + +L K GY+ + DG A E L+ +DLV++++ +P++
Sbjct: 1 MFNVLVVEDDKDLRGLFCTILTKNGYKAISAEDGEKALEILE--KEYVDLVISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF L + E + N+P++M++ ++ + K L G D+++KPV NE+
Sbjct: 59 DGFELTKALREANF--NLPILMITAKETFADKQKGFLVGTDDYMVKPVDVNEM 109
>gi|225457164|ref|XP_002283787.1| PREDICTED: two-component response regulator ARR5-like [Vitis
vinifera]
Length = 222
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH---------SIDLVL 92
L VL V+ R++I LL+ +V AV G A + L ++L++
Sbjct: 29 LHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGLDGEENSVGFDGLKVNLIM 88
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+ +P ++G+ LL + E + IPV++MS + ++ + +C+ +GA +F++KPV+ +
Sbjct: 89 TDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRIDRCLEEGAEEFIVKPVKLAD 148
Query: 153 LRNLWQHVWR 162
+R L + R
Sbjct: 149 VRRLRDFIMR 158
>gi|402771988|ref|YP_006591525.1| adenylate/guanylate cyclase [Methylocystis sp. SC2]
gi|401774008|emb|CCJ06874.1| Adenylate/guanylate cyclase [Methylocystis sp. SC2]
Length = 547
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ + S R+++ L + G+ VA +G + E L+ P DL+L ++ +P ISG
Sbjct: 197 RILVVDDNASNRELLKRRLERQGHSVALAENGSCSLEMLRKEP--FDLILLDLLMPDISG 254
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+L+++ ++IPVI++S + I +++C+ GA D+L KP
Sbjct: 255 LDVLSILKSEPDLRDIPVIVISALNEIDSIVRCIQAGAEDYLAKP 299
>gi|147811962|emb|CAN63719.1| hypothetical protein VITISV_005736 [Vitis vinifera]
Length = 255
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+ + E ++I+ L YRV +V L C SID+VL E +LP +
Sbjct: 97 ITMTEQKXKXLKLIAIGLMPXAYRVTSVGSTREVIYVLNCEGASIDIVLAEADLPMANSM 156
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
L + + + IPV+ LHD + +L +D+L+ P+ N L NLW HVWR
Sbjct: 157 KTLKYITQDQELRCIPVMRQHLHD------RKVLDAWSDYLMMPLGSNVLFNLWTHVWRT 210
Query: 164 HSLLGGHVPQNLHDVYH 180
+LG +P+ +++H
Sbjct: 211 RRMLG--LPEK--NIFH 223
>gi|392951366|ref|ZP_10316921.1| hypothetical protein WQQ_09930 [Hydrocarboniphaga effusa AP103]
gi|391860328|gb|EIT70856.1| hypothetical protein WQQ_09930 [Hydrocarboniphaga effusa AP103]
Length = 1327
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVLL + + R+ + +LL + V+ V DGLAAW+ L+ P DL+LT+V +P + G
Sbjct: 626 RVLLADDNADMREYVHSLL-SAQHEVSCVADGLAAWQALQGEPP--DLLLTDVMMPGLDG 682
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL V + +PV+++S ++ + GA D+L+KP EL
Sbjct: 683 FGLLRRVRGDARLRELPVVLLSARAGEESRVEGLNAGADDYLVKPFAAKEL 733
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLVLTEVELPSI 100
LRVL+V+ D R++I L CG V +V G A + + RP L+++++ +P +
Sbjct: 1204 LRVLVVDDDRDARELIEHALADCGAEVLSVDSGAEALRVIEEQRPQ---LLISDIGMPGM 1260
Query: 101 SGFALLTLV--MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ LL V M + K P+ + + + + ML G L KPV EL
Sbjct: 1261 DGYELLRRVRAMPEVMAKLRPIALTAFARTEDRT-RAMLAGFHMHLSKPVEPAEL 1314
>gi|434399888|ref|YP_007133892.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera
PCC 7437]
gi|428270985|gb|AFZ36926.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera
PCC 7437]
Length = 977
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+ E +TR+++ +L GY+V DG A + L IDLVL+++E+P ++GF
Sbjct: 857 ILIAEDSVATRRMLEKILSAVGYQVIVCRDGQEALDVLDQHQTRIDLVLSDIEMPRVNGF 916
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
LL + H V + IPV+M + + M GA +L KP++ EL
Sbjct: 917 ELLQKIRSHPVWEEIPVVMATSRTGDRHRQQAMDLGATGYLGKPIQPQEL 966
>gi|75907309|ref|YP_321605.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
29413]
gi|75701034|gb|ABA20710.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
29413]
Length = 1431
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LLV+ + R+ + LL + Y V DGLAA E L H DLVLT+V +P + G
Sbjct: 608 RILLVDDNADMREYVKRLLSR-HYVVETATDGLAALEALA--DHLPDLVLTDVMMPRLDG 664
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL+ + ++ + IP+I++S ++ + GA D+LIKP EL
Sbjct: 665 FGLLSALRSNNRTREIPIILLSARAGEEAKVEGLEAGADDYLIKPFSAREL 715
>gi|337285857|ref|YP_004625330.1| Fis family two component sigma-54 specific transcriptional
regulator [Thermodesulfatator indicus DSM 15286]
gi|335358685|gb|AEH44366.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Thermodesulfatator indicus DSM 15286]
Length = 451
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ D S ++ + L K GYRVA DG A L P DL+L ++ +P + G
Sbjct: 6 ILIVDDDKSLQEFLELFLAKEGYRVAVAGDGEEALSYLSKNPA--DLILADIRMPRLDGI 63
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
+ L + E + IPVIM++ + S+ + +GA D++ KP + ++LR+L +
Sbjct: 64 SFLKALRERAL--RIPVIMITAYASLDTAVTAKQEGAFDYVPKPFKLDQLRDLIKKAL 119
>gi|239905949|ref|YP_002952688.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
gi|239795813|dbj|BAH74802.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
Length = 640
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
+VLLV+ D++ R+++S + GY V P G A E C +VLT++++P + G
Sbjct: 4 KVLLVDDDEAIREVLSLSIADLGYDVETAPGGREALEL--CATFKPSIVLTDIKMPGMDG 61
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
LL+ V D I VIM+S H + + ++ + + A DFL KPVR
Sbjct: 62 IELLSRVKALD--PEIEVIMISGHGDMELAIESLKRQALDFLTKPVR 106
>gi|374301471|ref|YP_005053110.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554407|gb|EGJ51451.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 123
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +L+V+ + R +++ +++K G++V DGL E K +SIDL++++V +P
Sbjct: 1 MSKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLE--KLYSNSIDLIISDVNMPR 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ GF + +V E + K+ P++++S + + M GA +L+KP + ++
Sbjct: 59 MDGFTFIKIVREQEAYKDTPIVVLSTEGQEKDIQQGMNLGANLYLVKPAQPEKM 112
>gi|317154217|ref|YP_004122265.1| sigma-54 factor interaction domain-containing protein
[Desulfovibrio aespoeensis Aspo-2]
gi|316944468|gb|ADU63519.1| sigma-54 factor interaction domain-containing protein
[Desulfovibrio aespoeensis Aspo-2]
Length = 452
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ D++ Q++ A L G A E L C P +DLV+++V++P + G
Sbjct: 9 ILVVDDDENILQVLEARLLSTGLNPLMADRAETALEMLACEP--VDLVVSDVKMPGMGGH 66
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
LL ++EH +IPVIM++ H +I + + GAAD+L KP EL
Sbjct: 67 GLLREILEH--WPHIPVIMLTAHGTIPDAVGSIQAGAADYLTKPFDGKEL 114
>gi|225465885|ref|XP_002267404.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 220
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 18/135 (13%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCR--------PHS-------- 87
++ DDS R++I LL+ Y+V AV G A E L + P S
Sbjct: 11 VLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQRNLSPPSLCPSQEME 70
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL + E K+IPV++MS + S + +C+ +GA DF +KP
Sbjct: 71 VNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKP 130
Query: 148 VRRNELRNLWQHVWR 162
V+ +++ L H+ +
Sbjct: 131 VQLSDVNKLRPHLLK 145
>gi|444917637|ref|ZP_21237730.1| Response regulator of zinc sigma-54-dependent two-component system
[Cystobacter fuscus DSM 2262]
gi|444710769|gb|ELW51735.1| Response regulator of zinc sigma-54-dependent two-component system
[Cystobacter fuscus DSM 2262]
Length = 472
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLLV+ D + +++ ALL + G V G A L +P ID+V+++V +P + G
Sbjct: 9 VLLVDDDPAVAKVLGALLVQAGLSVHTAARGDEALALLGRKP--IDVVVSDVRMPGMGGL 66
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
LL V ++PVI+++ H ++ + ++ M GAADF +KP R E+
Sbjct: 67 ELLAEVQRG--WPDVPVILLTAHGTVPLAVEAMKAGAADFALKPFDREEI 114
>gi|115377600|ref|ZP_01464797.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
gi|310820429|ref|YP_003952787.1| sensor protein [Stigmatella aurantiaca DW4/3-1]
gi|115365401|gb|EAU64439.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
gi|309393501|gb|ADO70960.1| Sensor protein [Stigmatella aurantiaca DW4/3-1]
Length = 1020
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+LL + + R+ ++ LL + V AV DG AA + RP DLVLT+V +P +
Sbjct: 633 VRILLADDNADMREYVARLLSPR-WTVEAVADGAAALDVALARPP--DLVLTDVMMPRLD 689
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF LL + + IPVIM+S ++ M GA D+L+KP EL
Sbjct: 690 GFGLLRALRSQASTRAIPVIMLSARAGEEARVEGMEAGADDYLVKPFSAREL 741
>gi|451946979|ref|YP_007467574.1| serine phosphatase RsbU, regulator of sigma subunit [Desulfocapsa
sulfexigens DSM 10523]
gi|451906327|gb|AGF77921.1| serine phosphatase RsbU, regulator of sigma subunit [Desulfocapsa
sulfexigens DSM 10523]
Length = 405
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ + R+++++++R GY V G A E + R H DL+L ++ +P + G
Sbjct: 14 RILVVDDNPVNRELLASIVRNAGYGVVTAIGGKEALELV--RQHPFDLILLDIVMPEMDG 71
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
FA+ + E +++P+IM+S D + C GA D++ KP R E+
Sbjct: 72 FAVCKSLQEDLQTRDVPIIMVSSLDLSETKIHCFDLGAIDYITKPFHRGEV 122
>gi|376262398|ref|YP_005149118.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Clostridium sp. BNL1100]
gi|373946392|gb|AEY67313.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Clostridium sp. BNL1100]
Length = 223
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +L+VE D S ++ +L K GY DGL AW+ ++ IDLV++++ +P++
Sbjct: 1 MFNILVVEDDQSLSKLFCTVLAKHGYSYYVANDGLEAWDIIE--KQYIDLVISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ L+ + D N+PV+M++ D+ + G D++IKPV NE+
Sbjct: 59 DGYELVKSL--RDNGYNMPVLMITAKDTFEDMKNGFRVGTDDYMIKPVNVNEM 109
>gi|303232491|ref|ZP_07319179.1| putative Sensory transduction protein regX3 [Atopobium vaginae
PB189-T1-4]
gi|302481415|gb|EFL44487.1| putative Sensory transduction protein regX3 [Atopobium vaginae
PB189-T1-4]
Length = 240
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LLVE + + R+ +SA L + GY V V DG A E + HS DL++ ++ LP +SG
Sbjct: 7 RILLVEDEKTIREAVSAYLEREGYFVRGVGDGQNALEEFE--KHSFDLIILDLMLPKLSG 64
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
+ V E N+P+IM++ + + + GA D+LIKP EL + + R
Sbjct: 65 ERVCRAVRE---TSNVPIIMLTAKGEVEDRIIGLELGADDYLIKPFSPRELVARVRALLR 121
Query: 163 R 163
R
Sbjct: 122 R 122
>gi|297568710|ref|YP_003690054.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924625|gb|ADH85435.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 530
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ + R+++S LR+ GY V +G A L+ + DLVL ++ +P + G+
Sbjct: 171 ILVVDDITANREVLSRRLRRLGYLVMEAENGRQALAMLET--GAFDLVLLDILMPELDGY 228
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+L + +++ +++PV+M+S I+ V++C+ GA D+L KP LR
Sbjct: 229 EVLRRIKANELIRHVPVLMISAVGDINSVVRCLEAGADDYLAKPFNSVLLR 279
>gi|326204762|ref|ZP_08194617.1| two component transcriptional regulator, winged helix family
[Clostridium papyrosolvens DSM 2782]
gi|325985133|gb|EGD45974.1| two component transcriptional regulator, winged helix family
[Clostridium papyrosolvens DSM 2782]
Length = 223
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +L+VE D S ++ +L K GY DGL AW+ ++ IDLV++++ +P++
Sbjct: 1 MFNILVVEDDQSLSKLFCTVLAKHGYSYYVANDGLEAWDIIE--KQYIDLVISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ L+ + D N+PV+M++ D+ + G D++IKPV NE+
Sbjct: 59 DGYELVKSL--RDNGYNMPVLMITAKDTFEDMKNGFRVGTDDYMIKPVNVNEM 109
>gi|397691109|ref|YP_006528363.1| response regulator receiver protein [Melioribacter roseus P3M]
gi|395812601|gb|AFN75350.1| response regulator receiver protein [Melioribacter roseus P3M]
Length = 121
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 43 RVLLVEADDS--TRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
RV+LV ADDS R+ +S L GY + A DG+ A E L + IDL++T++ +P+I
Sbjct: 3 RVILV-ADDSPTIRKFVSVALSTKGYEIIACADGMEALEKLP--GNKIDLLITDLNMPNI 59
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
GF L+ + E++ K +P+I++S S + + + GA +LIKP
Sbjct: 60 DGFQLIKSIRENEEYKELPIIVLSSLGSSEDIHRGLEYGANSYLIKP 106
>gi|197116920|ref|YP_002137347.1| response receiver [Geobacter bemidjiensis Bem]
gi|197086280|gb|ACH37551.1| response receiver [Geobacter bemidjiensis Bem]
Length = 125
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDG---LAAWETLKCRPHSIDLVLTEVELP 98
+R+L+ E D + RQ+++ LL +CG+ +V +G + AWE + D + +V++P
Sbjct: 1 MRILVAEDDPTIRQMMATLLSRCGFDCRSVDNGRKAVEAWED-----ETFDFIFMDVQMP 55
Query: 99 SISGFALLTLVMEHDVCK--NIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNL 156
+ GFA ++ E + K + P+I ++ H +C+ G D+L KP+ +EL +L
Sbjct: 56 VMDGFAATRMIREKEALKGGHTPIIALTAHAMEQDRQQCLDSGMDDYLSKPIDLDELFSL 115
Query: 157 WQHVWRR 163
++ + +
Sbjct: 116 LKNDYSK 122
>gi|158521104|ref|YP_001528974.1| response regulator receiver protein [Desulfococcus oleovorans Hxd3]
gi|158509930|gb|ABW66897.1| response regulator receiver protein [Desulfococcus oleovorans Hxd3]
Length = 846
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLLVE D TR +I+ L GY V A DG+ A L S DL+L+++++P++ GF
Sbjct: 727 VLLVEDDADTRMLITRFLETDGYTVTACADGIDALLCLG--KQSFDLILSDIDMPNLDGF 784
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
LL ++ + V ++PVI ++ + + GA D++ KPV+++ LR
Sbjct: 785 KLLEMINQKGV--SVPVIFLTSRAGHEDETRGLELGAVDYIKKPVQKDLLR 833
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 89 DLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
DLVL ++ +P + G+ + T + IPV+ ++ + + GA+DFL+KPV
Sbjct: 52 DLVLLDINMPKMDGYEVCTRLQATPKTSFIPVVFLTAMEEEKDRARAFAAGASDFLVKPV 111
Query: 149 RRNEL 153
+++ L
Sbjct: 112 KKDAL 116
>gi|383453102|ref|YP_005367091.1| sigma-54 dependent DNA-binding response regulator [Corallococcus
coralloides DSM 2259]
gi|380732817|gb|AFE08819.1| sigma-54 dependent DNA-binding response regulator [Corallococcus
coralloides DSM 2259]
Length = 463
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ D + +++ ALL + G + A L RP ID+VL++V +P +SG
Sbjct: 9 VLVVDDDPALLKVLGALLTQAGLTPHPASNAKDALALLARRP--IDVVLSDVRMPGMSGM 66
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
LL V ++PV++M+ H ++ + ++ M GAADF++KP R EL
Sbjct: 67 ELLAEVGRG--WPDVPVLLMTAHGTVPLAVEAMKAGAADFVLKPFDREEL 114
>gi|153937923|ref|YP_001390256.1| DNA-binding response regulator [Clostridium botulinum F str.
Langeland]
gi|384461335|ref|YP_005673930.1| DNA-binding response regulator [Clostridium botulinum F str.
230613]
gi|152933819|gb|ABS39317.1| DNA-binding response regulator [Clostridium botulinum F str.
Langeland]
gi|295318352|gb|ADF98729.1| DNA-binding response regulator [Clostridium botulinum F str.
230613]
Length = 223
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ RVL+VE D + R++ +L K GY+ DG +A + L IDL+++++ +P++
Sbjct: 1 MFRVLVVEDDPALRKLFCTVLNKNGYKSIEAKDGDSALDIL--YREYIDLIISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ L L+ E + N+P++M++ ++ S + G D+++KP+ NE+
Sbjct: 59 DGYTLTKLIRESN--NNVPILMITAKETFSDKQEGFRVGTDDYMVKPIDVNEM 109
>gi|332531607|ref|ZP_08407504.1| response regulator receiver domain-containing protein [Hylemonella
gracilis ATCC 19624]
gi|332038970|gb|EGI75399.1| response regulator receiver domain-containing protein [Hylemonella
gracilis ATCC 19624]
Length = 130
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVA-AVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
LR L+V+ + R+I+ LL++ G+ A DG+ A + L+ P D V++++ +P++
Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKESGFSEADEAEDGVVALQKLRALP--FDFVVSDINMPNM 63
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
+GF LL + + K+IPV+M++ ++ +GAA +++KP + L H+
Sbjct: 64 NGFQLLAEIKRDEKLKHIPVLMVTAEARKEDIVLAAQQGAAGYIVKPFTKAVLEEKLHHI 123
Query: 161 WRRHSL 166
++ L
Sbjct: 124 LKKSGL 129
>gi|90265238|emb|CAH67773.1| H0322F07.10 [Oryza sativa Indica Group]
gi|90399191|emb|CAH68178.1| H0403D02.6 [Oryza sativa Indica Group]
gi|125550193|gb|EAY96015.1| hypothetical protein OsI_17886 [Oryza sativa Indica Group]
Length = 170
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCR--PHSIDLVLTEVELPS 99
+ VL V+ R +I+ +LR YRV V A E L C ++++++T+ +P
Sbjct: 50 MHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELL-CLGLVPNVNMIITDYWMPG 108
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
++G+ LL V E K IPV++MS + + + +C+ +GA DFL+KPVR +++ L
Sbjct: 109 MTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRLCSR 168
Query: 160 V 160
+
Sbjct: 169 I 169
>gi|403718067|ref|ZP_10943094.1| hypothetical protein KILIM_081_00190 [Kineosphaera limosa NBRC
100340]
gi|403208733|dbj|GAB97777.1| hypothetical protein KILIM_081_00190 [Kineosphaera limosa NBRC
100340]
Length = 132
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RV++ + D R++++ L++ GY + AV DG AW ++ P L + +V +P +S
Sbjct: 11 MRVVVADDDADIRELVTFKLQQAGYEIDAVADGAQAWASISEAPPR--LAVLDVMMPGLS 68
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G +L V E + K +PVI+++ S V GA D++IKP EL
Sbjct: 69 GLDVLRKVREDERTKTVPVILLTARSRDSDVDSGFATGATDYVIKPFSPREL 120
>gi|209884232|ref|YP_002288089.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM5]
gi|337742079|ref|YP_004633807.1| transcriptional regulator ZraR [Oligotropha carboxidovorans OM5]
gi|386031096|ref|YP_005951871.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM4]
gi|209872428|gb|ACI92224.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM5]
gi|336096162|gb|AEI03988.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM4]
gi|336099743|gb|AEI07566.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM5]
Length = 499
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +L+ + D R+++ ++++CGYR V G AA L ID V+ ++ +P
Sbjct: 1 MAATILIADDDAVQRRLLDNMVQRCGYRTIVVESGDAAMTVLADETQPIDAVVLDLVMPG 60
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+ G +L + D ++PV++ + H I V+ M GA DF++KPV
Sbjct: 61 LDGLGVLARM--RDASLHVPVVVQTAHGGIDNVVSAMRAGAHDFVVKPV 107
>gi|421856705|ref|ZP_16289065.1| type 4 pili signal transduction component [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|403187773|dbj|GAB75266.1| type 4 pili signal transduction component [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 1456
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPS 99
R L++ DDS R++ S LL + GY V DG+ A E L+ +P DL+L ++E+P
Sbjct: 1334 RRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVEAIEQLESIKP---DLMLLDIEMPR 1390
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ GF + LV HDV +N+P+IM++ + GA ++ KP + +L
Sbjct: 1391 MDGFEVTNLVRHHDVHRNMPIIMITSRTGEKHRERAFALGATQYMGKPFQEADL 1444
>gi|354586081|ref|ZP_09004754.1| two component transcriptional regulator, winged helix family
[Paenibacillus lactis 154]
gi|353183057|gb|EHB48589.1| two component transcriptional regulator, winged helix family
[Paenibacillus lactis 154]
Length = 225
Score = 65.9 bits (159), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ D + R+++ L + G V PDGLAA ++ P +DLV+ ++ +P++ G+
Sbjct: 4 ILVVDDDPNIRELVKVFLEEAGMDVLEAPDGLAALSVMEQSP--VDLVVMDIMMPNMDGW 61
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
L + HD +PV+M++ ++K G D+L+KP EL
Sbjct: 62 ELCREIRRHD---GVPVLMLTAKGETRQIVKGFELGTDDYLVKPFEPAEL 108
>gi|298529768|ref|ZP_07017171.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511204|gb|EFI35107.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 502
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ ++S R+I L+ GY V DG+ A E + R IDL+++++ +P + G
Sbjct: 12 VLVVDDEESLREICQDALKDEGYEVLQAEDGVQAKEQI-ARHQDIDLIISDLRMPRLGGL 70
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
LL EH++ +I ++M+ SI ++C+ GAAD+L KP
Sbjct: 71 ELLQYTAEHNL--DIDFLVMTGFASIETAVECIKTGAADYLPKP 112
>gi|149923945|ref|ZP_01912331.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
gi|149815177|gb|EDM74726.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
Length = 471
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ ++ R ++ LLR+ G+ V +V G A L HS+D+VL++V +P + G
Sbjct: 8 VLVVDDEEPMRHMLELLLRRAGFEVVSVESGEQALAHLA--EHSVDVVLSDVRMPGLGGL 65
Query: 104 ALLT-LVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
L + EH + ++MMS ++ + L+ M +GA D++ KP +R+E+
Sbjct: 66 GLAERMSAEH---PEVTLVMMSAFGTVDLALEAMQRGAYDYVSKPFKRDEV 113
>gi|168029974|ref|XP_001767499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681205|gb|EDQ67634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 13/124 (10%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL----------KCRPHSIDLVLT 93
++ DDS R++I LL+ Y+V V L A E L K +++L++T
Sbjct: 21 VLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGLSESCSSSGKPNVRAVNLIMT 80
Query: 94 EVELPSISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
+ +P ++G+ LL +V E K +PVI+MS + + + C+ +GA DFLIKPV+ +
Sbjct: 81 DYCMPGMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKSCLAEGAEDFLIKPVQLED 140
Query: 153 LRNL 156
++ L
Sbjct: 141 VQRL 144
>gi|153004853|ref|YP_001379178.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028426|gb|ABS26194.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 357
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+V+ D S R +I+ LL + GY V AV AA + R LV+++V +P G
Sbjct: 10 RILIVDDDTSVRDVIAVLLGEEGYAVTAVSSAEAALDA--ARLTDFSLVISDVRMPGKDG 67
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL-RNLWQHVW 161
F LL V E + + VIM++ ++C+ GAAD+L+KP + +L R + + +
Sbjct: 68 FWLLERVRE--LHPDTAVIMLTAFGDTEAAVECLRNGAADYLLKPPKVTDLIRAIERALG 125
Query: 162 RRHSLLGGH 170
RR L H
Sbjct: 126 RRRLELARH 134
>gi|109631208|gb|ABG35780.1| SRR198 [Striga asiatica]
Length = 238
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL-------------KCRPHS--- 87
++ DDS R++I LL+ ++V V G A E L P +
Sbjct: 12 VLAVDDSLIDRKLIEKLLKNSSFQVTTVDSGSKALEFLGWHRDERSNSKGTSVSPKTHQE 71
Query: 88 --IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
++LV+T+ +P ++G+ LL + E KNIPV+++S + S + +C+ +GA +F +
Sbjct: 72 VEVNLVITDYCMPGMTGYDLLKKMKESSSLKNIPVVIVSSENVPSRITRCLEEGAEEFFL 131
Query: 146 KPVRRNELRNLWQHVWRRHSLLGGHVPQNLH 176
KP++ ++ LW ++ R P+N+
Sbjct: 132 KPMKLTDVNKLWPYMLRTKGQNNVLKPENME 162
>gi|388507854|gb|AFK41993.1| unknown [Lotus japonicus]
Length = 209
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH----------SIDLV 91
L VL V+ R++I LL+ +V V G A + L ++L+
Sbjct: 20 LHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVKVNLI 79
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
+T+ +P ++G+ LL + E + IPV++MS + ++ + +C+ +GA DFL+KPV+ +
Sbjct: 80 MTDYSMPGMTGYELLKKIKESSAFREIPVVVMSSENILTRIDRCLEEGAEDFLLKPVKLS 139
Query: 152 ELRNLWQHVW 161
++R L +
Sbjct: 140 DVRRLRDFIM 149
>gi|119487004|ref|ZP_01620876.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
gi|119455933|gb|EAW37067.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
Length = 355
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ ++ R +++ + + GY+V +G A E ++ +P +DLVL ++ +P ++G+
Sbjct: 10 VLIVDDNEVNRDLLARRITREGYQVMLASNGFEALEMMRSQP--LDLVLLDIMMPQMNGY 67
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+L V + IP+IM+S + I V++C+ GA D+L KP
Sbjct: 68 QVLEAVKADQSLRYIPMIMISAVNDIESVVRCIELGAEDYLSKP 111
>gi|309951236|emb|CBX43988.1| putative A-type response regulator 6 [Populus x canadensis]
Length = 230
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 22/139 (15%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKC-------------------- 83
++ DDS R++I LL+ Y+V AV G A + L
Sbjct: 13 VLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDQSNPDTVPSVCPNDH 72
Query: 84 RPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADF 143
R ++L++T+ +P ++G+ LL V E ++IPV++MS + S + +C+ +GA +F
Sbjct: 73 REVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLEEGAEEF 132
Query: 144 LIKPVRRNELRNLWQHVWR 162
+KPVR +L L H+ +
Sbjct: 133 FLKPVRLADLNRLKPHMMK 151
>gi|421619136|ref|ZP_16060100.1| sigma-54 dependent transcriptional regulator/response regulator
FleR [Pseudomonas stutzeri KOS6]
gi|409778932|gb|EKN58612.1| sigma-54 dependent transcriptional regulator/response regulator
FleR [Pseudomonas stutzeri KOS6]
Length = 464
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M ++LLVE D + R+ + L+ GY AV AA LK P LV+++V +P
Sbjct: 1 MAAKILLVEDDHALREALGVTLQLGGYEYRAVDCAEAALVALKREPFG--LVVSDVNMPG 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLW-Q 158
+ G LL LV +H IPV++M+ +++ + M +GA D+L+KP L L +
Sbjct: 59 MDGHELLALVRQHH--PQIPVLLMTAFGAVARAVDAMRQGAVDYLVKPFEPQTLLELLGR 116
Query: 159 HV 160
HV
Sbjct: 117 HV 118
>gi|255583668|ref|XP_002532588.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223527676|gb|EEF29785.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 221
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 20/140 (14%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETL-------------KCRPHS--- 87
++ DDS R++I LL+ Y+V V G A + L P+S
Sbjct: 11 VLAVDDSLIDRKLIEKLLKISSYQVTTVDSGSKALQFLGLHEDDRSSPEIPSVSPNSHQE 70
Query: 88 --IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLI 145
++L++T+ +P ++G+ LL + E KNIPV++MS + + + +C+ +GA +F +
Sbjct: 71 VEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPARITRCLEEGAEEFFL 130
Query: 146 KPVRRNELRNLWQHVWRRHS 165
KPV+ ++L L H+ + S
Sbjct: 131 KPVQLSDLNRLRPHMMKTKS 150
>gi|242281036|ref|YP_002993165.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
gi|242123930|gb|ACS81626.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
Length = 418
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
++V++ E + + R+I+ LL + + V A DG A E +K P + L+LT+ E+P++
Sbjct: 131 IKVVIAEDNSTARKIMQRLLERLNFTVLAGEDGAEALELIKKNP-DVQLLLTDYEMPNLD 189
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF L++ V + + ++ +S HDS ++ K + +GA DFL KP E W
Sbjct: 190 GFELVSEVRKTHSRDQMAILGVSAHDSGAITAKFLKRGANDFLKKPFEVEEFS------W 243
Query: 162 R 162
R
Sbjct: 244 R 244
>gi|303247352|ref|ZP_07333625.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
gi|302491266|gb|EFL51155.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
Length = 122
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +L+V+ + R +++ ++RK G++V A DGL E L P +DL++T++ +P
Sbjct: 1 MPKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLYTDPQ-VDLIITDINMPR 59
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
+ G + V E D ++IP++++S + + GA +++KP +
Sbjct: 60 MDGITFIKTVREQDAYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|115484121|ref|NP_001065722.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|71273491|emb|CAI79413.1| Type A response regulator 9 [Oryza sativa Indica Group]
gi|87116388|dbj|BAE79353.1| typeA response regulator 9 [Oryza sativa Japonica Group]
gi|108863989|gb|ABA91415.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|113644426|dbj|BAF27567.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|118790795|tpd|FAA00260.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215765046|dbj|BAG86743.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185231|gb|EEC67658.1| hypothetical protein OsI_35072 [Oryza sativa Indica Group]
gi|222615502|gb|EEE51634.1| hypothetical protein OsJ_32929 [Oryza sativa Japonica Group]
Length = 201
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH--------------S 87
VL V+ R++I LL+ ++V V G A E L H +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVA 68
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL + E ++IPV++MS + S + +C+ +GA +F +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKP 128
Query: 148 VRRNELRNLWQHVWR 162
VR +++ L H+ +
Sbjct: 129 VRLSDMSKLKPHILK 143
>gi|148378896|ref|YP_001253437.1| DNA-binding response regulator [Clostridium botulinum A str. ATCC
3502]
gi|153931468|ref|YP_001383278.1| DNA-binding response regulator [Clostridium botulinum A str. ATCC
19397]
gi|153936439|ref|YP_001386827.1| DNA-binding response regulator [Clostridium botulinum A str. Hall]
gi|148288380|emb|CAL82457.1| two component response regulator [Clostridium botulinum A str. ATCC
3502]
gi|152927512|gb|ABS33012.1| DNA-binding response regulator [Clostridium botulinum A str. ATCC
19397]
gi|152932353|gb|ABS37852.1| DNA-binding response regulator [Clostridium botulinum A str. Hall]
Length = 223
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +VL+VE D + R++ +L K GY+ DG +A + L IDL+++++ +P++
Sbjct: 1 MFKVLVVEDDPALRKLFCTVLNKNGYKSIEAKDGHSALDVL--YKEYIDLIISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ L L+ E + N+P++M++ ++ S + G D+++KP+ NE+
Sbjct: 59 DGYTLTKLIRESN--NNVPILMITAKETFSDKQEGFRVGTDDYMVKPIDVNEM 109
>gi|444380100|ref|ZP_21179265.1| Regulatory protein LuxO [Enterovibrio sp. AK16]
gi|443675803|gb|ELT82519.1| Regulatory protein LuxO [Enterovibrio sp. AK16]
Length = 483
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+VE S + + L V G A S LVL ++ LP ISG
Sbjct: 9 RILMVEDTASVAALYKSYLNPLDVEVEIASTGQEAIHHFSS--GSFSLVLLDLRLPDISG 66
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
F +L+ + +H +IPV++M+ H SI ++ M GA+DFLIKP + LR + +
Sbjct: 67 FDVLSEIRQHH--PDIPVVIMTAHGSIDAAVEAMRYGASDFLIKPCEADLLRVTVNNALK 124
Query: 163 RHSLLGGHVPQNLH 176
S +GG P+ +
Sbjct: 125 PKSKIGGQSPEGAY 138
>gi|440755764|ref|ZP_20934966.1| signal transducing histidine kinase, homodimeric domain protein
[Microcystis aeruginosa TAIHU98]
gi|440175970|gb|ELP55339.1| signal transducing histidine kinase, homodimeric domain protein
[Microcystis aeruginosa TAIHU98]
Length = 1024
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ R++++ L K GYR+ DGL AWE L+ + DL+L ++E+P ++G
Sbjct: 895 VLIVDDSLIVREMLAISLVKAGYRIEQAQDGLEAWEKLQA-GLACDLILCDIEMPRLNGL 953
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
LL+ + E + + IPV +++ + M KGA + +KP + L + Q +
Sbjct: 954 ELLSRLQEDEQLQGIPVAIIAYQGTQKMQHLAAAKGAKGYFVKPYIEDVLLSAAQRL 1010
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + R+++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 739 VLIVDDSITVRELLSLSFSKTGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 793
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS 124
++G LL+ + ++ IPV +++
Sbjct: 794 MNGLELLSNLQKYPRLATIPVALLT 818
>gi|315647496|ref|ZP_07900600.1| transcriptional regulatory protein cutR (Defective melC1 suppressor
protein) [Paenibacillus vortex V453]
gi|315277120|gb|EFU40458.1| transcriptional regulatory protein cutR (Defective melC1 suppressor
protein) [Paenibacillus vortex V453]
Length = 231
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+++LLVE + + R II+ LR+C Y V DG A E + + DL++ ++ LP I
Sbjct: 1 MKLLLVEDETALRNIIAKGLRRCNYSVDLAADGEEALEFYEV--YDYDLIVLDLNLPKID 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G +L V ++ I ++++S I ++K + GA D+L+KP NEL + +
Sbjct: 59 GIEVLRRVRSNN--NEIKILILSARTEIEDIIKGLDDGANDYLVKPFDFNELEARIRSLL 116
Query: 162 RR 163
RR
Sbjct: 117 RR 118
>gi|302338615|ref|YP_003803821.1| winged helix family two component transcriptional regulator
[Spirochaeta smaragdinae DSM 11293]
gi|301635800|gb|ADK81227.1| two component transcriptional regulator, winged helix family
[Spirochaeta smaragdinae DSM 11293]
Length = 227
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+VE D++TR+++ + GY+V DG+ A + K + H IDL++ ++ +P + G+
Sbjct: 4 ILVVEDDENTRKLMKTIFLLNGYKVFVAKDGIDALD--KIQDHHIDLIVLDLMMPRMDGY 61
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
T + + + N+P++M++ ++ + K L G D+++KPV E+ + + RR
Sbjct: 62 EFTTTLRKAN--NNVPILMVTAKEAPADKKKGFLVGTDDYMVKPVDEEEMLLRVKALLRR 119
Query: 164 HSLLGGH 170
++ H
Sbjct: 120 SRIVNEH 126
>gi|159030707|emb|CAO88380.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1024
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ R++++ L K GYR+ DGL AWE L+ + DL+L ++E+P ++G
Sbjct: 895 VLIVDDSLIVREMLAISLVKAGYRIEQAQDGLEAWEKLQA-GLACDLILCDIEMPRLNGL 953
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
LL+ + E + + IPV +++ + M KGA + +KP
Sbjct: 954 ELLSRLQEDEQLQGIPVAIIAYQGTQKMQHLAAAKGAKGYFVKP 997
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + R+++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 739 VLIVDDSITVRELLSLSFSKTGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 793
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
++G LL+ + ++ IPV +++ S GA+ + KP +L + +
Sbjct: 794 MNGLELLSNLQKYPRLAAIPVALLTSRGSERHRQVAAKLGASGYFTKPYTEIDLLSAAER 853
Query: 160 VWRRHSLLGGHV 171
+ LL +
Sbjct: 854 MIAGEVLLANSI 865
>gi|425462178|ref|ZP_18841652.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
gi|389824832|emb|CCI25895.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
Length = 1025
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ R++++ L K GYR+ DGL AWE L+ + DL+L ++E+P ++G
Sbjct: 896 VLIVDDSLIVREMLAISLVKAGYRIEQAQDGLEAWEKLQA-GLACDLILCDIEMPRLNGL 954
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
LL+ + E + + IPV +++ + M KGA + +KP
Sbjct: 955 ELLSRLQEDEQLQGIPVAIIAYQGTQKMQHLAAAKGAKGYFVKP 998
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + R+++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 740 VLIVDDSITVRELLSLSFSKTGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 794
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS 124
++G LL+ + ++ IPV +++
Sbjct: 795 MNGLELLSNLQKYPRLATIPVALLT 819
>gi|421465519|ref|ZP_15914206.1| Hpt domain protein [Acinetobacter radioresistens WC-A-157]
gi|400203786|gb|EJO34771.1| Hpt domain protein [Acinetobacter radioresistens WC-A-157]
Length = 1460
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPS 99
R L++ DDS R++ S LL + GY V DG+ A E L+ +P DL+L ++E+P
Sbjct: 1338 RRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVEAIEQLESIKP---DLMLLDIEMPR 1394
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ GF + LV HDV +N+P+IM++ + GA ++ KP + +L
Sbjct: 1395 MDGFEVTNLVRHHDVHRNMPIIMITSRTGEKHRERAFALGATQYMGKPFQEADL 1448
>gi|242277823|ref|YP_002989952.1| multi-sensor signal transduction histidine kinase [Desulfovibrio
salexigens DSM 2638]
gi|242120717|gb|ACS78413.1| multi-sensor signal transduction histidine kinase [Desulfovibrio
salexigens DSM 2638]
Length = 645
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 39 RMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELP 98
R L +LLV+ + R ++ LL GY V + +G AA ++ +C P D++LT++++P
Sbjct: 12 RSQLCILLVDDEPDIRDLLGILLADLGYEVRSAENGEAACKSFRCNPP--DIILTDIKMP 69
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+ G LL V + I VIM+S H + + ++ + AADF+ KP+
Sbjct: 70 GMDGIELLRTVKKE--APEIEVIMISGHGDMQLAIESLKLNAADFITKPI 117
>gi|33330864|gb|AAQ10675.1| type-A response regulator [Catharanthus roseus]
Length = 254
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------IDLVL 92
L VL V+ R++I LL+ +V AV G A + L ++L+L
Sbjct: 14 LHVLAVDDSLVDRKVIERLLKISCCKVTAVESGRRALQYLGLDGEKSTVGFDGLKVNLIL 73
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+ +P ++G+ LL + K IPV++MS + ++ + +C+ +GA +FL+KPV+ ++
Sbjct: 74 TDYSMPGMTGYELLKKIKGSSTLKEIPVVIMSSENILTRIDRCLEEGAEEFLVKPVKLSD 133
Query: 153 LRNLWQHVWR 162
++ + V +
Sbjct: 134 VKRIKDFVLK 143
>gi|443662154|ref|ZP_21132889.1| signal transducing histidine kinase, homodimeric domain protein
[Microcystis aeruginosa DIANCHI905]
gi|443332130|gb|ELS46754.1| signal transducing histidine kinase, homodimeric domain protein
[Microcystis aeruginosa DIANCHI905]
Length = 1025
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ R++++ L K GYR+ DGL AWE L+ + DL+L ++E+P ++G
Sbjct: 896 VLIVDDSLIVREMLAISLVKAGYRIEQAQDGLEAWEKLQA-GLACDLILCDIEMPRLNGL 954
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
LL+ + E + + IPV +++ + M KGA + +KP
Sbjct: 955 ELLSRLQEDEQLQGIPVAIIAYQGTQKMQHLAAAKGAKGYFVKP 998
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + R+++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 740 VLIVDDSITVRELLSLSFSKTGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 794
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
++G LL+ + ++ IPV +++ S GA+ + KP +L + +
Sbjct: 795 MNGLELLSNLQKYPRLAAIPVALLTSRGSERHRQVAAKLGASGYFTKPYTEIDLLSAAER 854
Query: 160 VWRRHSLLGGHV 171
+ LL +
Sbjct: 855 MIAGEVLLANSI 866
>gi|312283391|dbj|BAJ34561.1| unnamed protein product [Thellungiella halophila]
Length = 190
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWE---------TLKCRPHSIDLV 91
+L VL V+ R+ I LLR +V V A + T+ ++L+
Sbjct: 24 LLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVDEKTVGLEDLKVNLI 83
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
+T+ +P ++G+ LL + E K+IPV++MS + + + +C+ +GA DFL+KPV+ +
Sbjct: 84 MTDYSMPGMTGYELLKKIKESSAFKDIPVVVMSSENILPRIDRCLEEGAEDFLLKPVKLS 143
Query: 152 ELRNL 156
++R L
Sbjct: 144 DVRRL 148
>gi|434399263|ref|YP_007133267.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera PCC
7437]
gi|428270360|gb|AFZ36301.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera PCC
7437]
Length = 1078
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ S RQ I+ L+K +V +GL A E L + I LV+ ++E+P ++GF
Sbjct: 951 LLVVDDSSSLRQTIAMSLQKISNQVIQAENGLNALEKLH-QSEEIGLVVCDLEMPFMNGF 1009
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
L + +H NIPVI+++ DS + GAA +LIKP R EL
Sbjct: 1010 QFLKAIRQHHNFSNIPVIILTSRDSAKHRKLALELGAAAYLIKPYREEEL 1059
>gi|428217824|ref|YP_007102289.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
gi|427989606|gb|AFY69861.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
Length = 334
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 44 VLLVEADDSTRQIISALLRKCGYR-VAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
+L+V+ ++ R ++ L + GY+ + A +G A E L H+ DL+L ++++P ++G
Sbjct: 9 LLIVDDNEMNRDVLRRHLVRQGYQQILAAENGKEALEMLS--GHNFDLILLDIQMPQMNG 66
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+ LL + +IPVIM+S D I V++C+ GA D+L KP R L+
Sbjct: 67 YELLAYLKADLKLSHIPVIMISAVDEIDSVVRCIEMGAEDYLHKPFNRVLLK 118
>gi|357633416|ref|ZP_09131294.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|386391833|ref|ZP_10076614.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
gi|357581970|gb|EHJ47303.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|385732711|gb|EIG52909.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
Length = 122
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M +L+V+ + R +++ ++RK G++V A DGL E L P +DL++T++ +P
Sbjct: 1 MPKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLYTDPQ-VDLIITDINMPR 59
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
+ G + V E +V ++IP++++S + + GA +++KP +
Sbjct: 60 MDGITFIKTVREQEVYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|346703374|emb|CBX25471.1| hypothetical_protein [Oryza glaberrima]
Length = 201
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPH--------------S 87
VL V+ R++I LL+ ++V V G A E L H +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVA 68
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL + E ++IPV++MS + S + +C+ +GA +F +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKP 128
Query: 148 VRRNELRNLWQHVWR 162
VR +++ L H+ +
Sbjct: 129 VRLSDMSKLKPHILK 143
>gi|262196327|ref|YP_003267536.1| PAS/PAC sensor hybrid histidine kinase [Haliangium ochraceum DSM
14365]
gi|262079674|gb|ACY15643.1| PAS/PAC sensor hybrid histidine kinase [Haliangium ochraceum DSM
14365]
Length = 1406
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
RVLL + + R + LL + + V AVPDG +A E ++ RP +LVL +V +P +SG
Sbjct: 634 RVLLADDNADMRAYVGRLLSE-RFAVEAVPDGRSALEAVRARPP--ELVLADVMMPQLSG 690
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
F LL + + ++ PVI++S ++ M GA D+L KP EL
Sbjct: 691 FELLAAIRDDPAIRDTPVILLSARAGEEARVEGMDAGADDYLTKPFSAREL 741
>gi|192293028|ref|YP_001993633.1| Fis family transcriptional regulator [Rhodopseudomonas palustris
TIE-1]
gi|192286777|gb|ACF03158.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris TIE-1]
Length = 495
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELP 98
MV R+L+ + D R+++ +++KCGY +V G AA E L +ID V+ ++ +P
Sbjct: 1 MVERILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEALTAPDAPAIDAVVLDLVMP 60
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+ G +L+ + + ++PVI+ + H I V+ M GA DF++KPV
Sbjct: 61 GLDGLGVLSKIRASGL--DVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPV 108
>gi|260222453|emb|CBA32031.1| Chemotaxis protein cheY [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 129
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVA-AVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
LR L+V+ + R+I+ LL++ GY A DG+AA + K R + D V++++ +P++
Sbjct: 5 LRFLIVDDFSTMRRIVRNLLKESGYSDADEAEDGVAALQ--KLRNSTFDFVVSDINMPNM 62
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
+GF LL + + + K+IPV+M++ ++ +GA+ +++KP + L + H+
Sbjct: 63 NGFQLLAEIKKDEKLKHIPVLMVTAEARKEDIVLAAQQGASGYIVKPFTKATLEDKVNHI 122
Query: 161 WRRHSL 166
+ L
Sbjct: 123 LTKMGL 128
>gi|255320548|ref|ZP_05361728.1| CheW-like domain protein [Acinetobacter radioresistens SK82]
gi|262379105|ref|ZP_06072261.1| chemotaxis protein histidine kinase [Acinetobacter radioresistens
SH164]
gi|255302398|gb|EET81635.1| CheW-like domain protein [Acinetobacter radioresistens SK82]
gi|262298562|gb|EEY86475.1| chemotaxis protein histidine kinase [Acinetobacter radioresistens
SH164]
Length = 1460
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPS 99
R L++ DDS R++ S LL + GY V DG+ A E L+ +P DL+L ++E+P
Sbjct: 1338 RRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVEAIEQLESIKP---DLMLLDIEMPR 1394
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ GF + LV HDV +N+P+IM++ + GA ++ KP + +L
Sbjct: 1395 MDGFEVTNLVRHHDVHRNMPIIMITSRTGEKHRERAFALGATQYMGKPFQEADL 1448
>gi|414153251|ref|ZP_11409578.1| putative DNA-binding response regulator in two-component system
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455633|emb|CCO07481.1| putative DNA-binding response regulator in two-component system
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 460
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLVLTEVELPSISG 102
VL+V+ ++S RQ + +L YRV DG + L K +P D+++T++ +P G
Sbjct: 6 VLVVDDEESVRQFLYDVLTDAAYRVETAVDGQECLDKLVKLKP---DVLVTDIRMPEKDG 62
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
+LL + + PVI+M+ + + +K M GA D+++KP +EL NL Q
Sbjct: 63 LSLLEQIKSLGITT--PVILMTAFGTTEVAIKAMKLGAFDYIVKPFDLDELLNLVQRAAE 120
Query: 163 RHSLLGGHVPQN----------------LHDVYHKGGAISENNMASSHSSDYAASSQKNK 206
+ + P + + VY G ++++N + +
Sbjct: 121 QTETVAAFRPHDQAAEPGVVNLIGNSPAMQAVYKDIGRVADSN------ATVLIQGESGT 174
Query: 207 GSEKVSDA---QSSRTSSPYLEAESA 229
G E V+ A SSR P+++ A
Sbjct: 175 GKELVARAIHNNSSRRHKPFIKINCA 200
>gi|320354436|ref|YP_004195775.1| response regulator receiver protein [Desulfobulbus propionicus DSM
2032]
gi|320122938|gb|ADW18484.1| response regulator receiver protein [Desulfobulbus propionicus DSM
2032]
Length = 451
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL-KCRPHSIDLVLTEVELPSISG 102
+L+VE +TR++I+ L + GYRV DGL A + + RP DL++ +V LP + G
Sbjct: 336 ILVVEDSSTTRKVIAITLSRQGYRVVEAADGLEALSKVSEERP---DLIMLDVILPKMDG 392
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+ +L+++ + K+IPVIM++ D +K + G++ +L KP
Sbjct: 393 YKILSIIKGNKEFKDIPVIMLTSKDGFISKMKGKMAGSSAYLTKP 437
>gi|242034251|ref|XP_002464520.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
gi|241918374|gb|EER91518.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
Length = 302
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
+DL++++V P+ +L E +IP ++MS + S+V+K + GA+DFLIKP
Sbjct: 11 VDLIISDVCFPTEDSLLIL---QEVTTKFDIPTVIMSSNGDASIVMKYITSGASDFLIKP 67
Query: 148 VRRNELRNLWQHVWRRHSLLG 168
VR L+N+WQHV+R+ L+G
Sbjct: 68 VRIEVLKNIWQHVFRKQ-LIG 87
>gi|94314245|ref|YP_587454.1| two component transcriptional regulator [Cupriavidus metallidurans
CH34]
gi|93358097|gb|ABF12185.1| two component transcriptional regulator [Cupriavidus metallidurans
CH34]
Length = 221
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVLLVE D Q++ L+ V DG AA + L R H D+VL ++ LP S
Sbjct: 1 MRVLLVEDDRMIGQVVQDALKDASCAADWVEDGQAALDALD-RQH-YDVVLLDLGLPRKS 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G A+LT + +PV++++ D++ + + GA D+L+KP +EL + VW
Sbjct: 59 GHAVLTSLRARG--SAVPVLILTARDALEDRIGGLDAGADDYLVKPFEMDELLARMRAVW 116
Query: 162 RRHSLLGGHVPQN 174
RR S L V N
Sbjct: 117 RRRSGLASSVLGN 129
>gi|262274534|ref|ZP_06052345.1| putative repressor protein luxO [Grimontia hollisae CIP 101886]
gi|262221097|gb|EEY72411.1| putative repressor protein luxO [Grimontia hollisae CIP 101886]
Length = 484
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+VE S + + L V G A + + L+L ++ LP ISG
Sbjct: 9 RILMVEDTASVAALYKSYLNPLDVEVEIASTGQEAIQRFSTG-STFSLILLDLRLPDISG 67
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
F +L+ + +H NIPV++M+ H SI ++ M GA+DFLIKP + LR + +
Sbjct: 68 FDVLSDIRQHH--PNIPVVIMTAHGSIDAAVEAMRYGASDFLIKPCEADLLRVTVNNALK 125
Query: 163 RHSLLGGHVPQNLH 176
S +G +P+ +
Sbjct: 126 PKSKIGNQLPEGAY 139
>gi|224120138|ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
gi|222858927|gb|EEE96474.1| type-b response regulator [Populus trichocarpa]
Length = 658
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 72/133 (54%), Gaps = 13/133 (9%)
Query: 35 SFLPRMVLRVLLVEADDSTRQIISALLRKCGYR--------VAAVPDGLAAWETLKCRPH 86
S LP+ + +L+V+ D ++ ++SA L+ Y+ V V A L+ +
Sbjct: 12 SSLPK--IHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDALSILRLKKG 69
Query: 87 SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIK 146
DLV++++ +P ++G L V E +PVI+MS +S +++ + + GAA +++K
Sbjct: 70 LFDLVVSDLHMPEMNGMELQKQVEEE---FKLPVIIMSSDESKNVISRSLEGGAAFYIVK 126
Query: 147 PVRRNELRNLWQH 159
P + +L+N+W +
Sbjct: 127 PANKVDLKNVWHY 139
>gi|430810303|ref|ZP_19437418.1| two component transcriptional regulator [Cupriavidus sp. HMR-1]
gi|429497232|gb|EKZ95771.1| two component transcriptional regulator [Cupriavidus sp. HMR-1]
Length = 221
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVLLVE D Q++ L+ V DG AA + L R H D+VL ++ LP S
Sbjct: 1 MRVLLVEDDRMIGQVVQDALKDASCAADWVEDGQAALDALD-RQH-YDVVLLDLGLPRKS 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G A+LT + +PV++++ D++ + + GA D+L+KP +EL + VW
Sbjct: 59 GHAVLTSLRARG--SAVPVLILTARDALEDRIGGLDAGADDYLVKPFEMDELLARMRAVW 116
Query: 162 RRHSLLGGHVPQN 174
RR S L V N
Sbjct: 117 RRRSGLASSVLGN 129
>gi|39937247|ref|NP_949523.1| Fis family transcriptional regulator [Rhodopseudomonas palustris
CGA009]
gi|39651105|emb|CAE29628.1| two component sigma-54-dependent transcriptional regulator, Fis
family [Rhodopseudomonas palustris CGA009]
Length = 495
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELP 98
MV R+L+ + D R+++ +++KCGY +V G AA E L +ID V+ ++ +P
Sbjct: 1 MVERILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEALTAPDAPAIDAVVLDLVMP 60
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+ G +L+ + + ++PVI+ + H I V+ M GA DF++KPV
Sbjct: 61 GLDGLGVLSKIRASGL--DVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPV 108
>gi|408678935|ref|YP_006878762.1| putative two-component system response regulator [Streptomyces
venezuelae ATCC 10712]
gi|328883264|emb|CCA56503.1| putative two-component system response regulator [Streptomyces
venezuelae ATCC 10712]
Length = 233
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSISG 102
VL VE DD R+ L + G+RV A+PDGL+ + + RP D+ L +V LP + G
Sbjct: 6 VLFVEDDDVIREATQLALERDGFRVTAMPDGLSGLDAFRAQRP---DIALLDVMLPGMDG 62
Query: 103 FALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
+L + + +PVIM+S DSI +VL + GA D++ KP + L + V
Sbjct: 63 VSLCRRIRDE---STVPVIMLSARADSIDVVLG-LEAGADDYVTKPFDGSVLMARIRAVL 118
Query: 162 RRHSLLGG 169
RR GG
Sbjct: 119 RRFGHAGG 126
>gi|115442281|ref|NP_001045420.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|15528802|dbj|BAB64697.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273481|emb|CAI79408.1| Type A response regulator 4 [Oryza sativa Indica Group]
gi|87116386|dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa Japonica Group]
gi|113534951|dbj|BAF07334.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|118790806|tpd|FAA00262.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125529138|gb|EAY77252.1| hypothetical protein OsI_05226 [Oryza sativa Indica Group]
gi|125573340|gb|EAZ14855.1| hypothetical protein OsJ_04783 [Oryza sativa Japonica Group]
gi|215678767|dbj|BAG95204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 232
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 20/145 (13%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPH-------------- 86
R ++ DDS R++I LL+ Y+V V G A E L R
Sbjct: 9 RFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSPD 68
Query: 87 ----SIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAAD 142
++L++T+ +P ++G+ LL V K+IPV++MS + + + +C+ GA +
Sbjct: 69 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEE 128
Query: 143 FLIKPVRRNELRNLWQHVWRRHSLL 167
F +KPV+ +++ L H+ +R L
Sbjct: 129 FFLKPVKLADMKKLKSHLLKRKQQL 153
>gi|298244029|ref|ZP_06967836.1| response regulator receiver protein [Ktedonobacter racemifer DSM
44963]
gi|297557083|gb|EFH90947.1| response regulator receiver protein [Ktedonobacter racemifer DSM
44963]
Length = 133
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP--HSIDLVLTEVELPSIS 101
V++++ + R+I+ LR+ G+RVAA DG+ A + + R DLV+ +++LP ++
Sbjct: 5 VMIIDDSPTVRKIVEISLRREGFRVAAFNDGVEALQAVTNRELERIPDLVILDIDLPKMN 64
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
G+ + + N P+IM+S H+ + LK L G +L KP +R
Sbjct: 65 GYEIARYLRSKSAWSNTPIIMLSRHNGVVDRLKARLAGVQTYLSKPFTTQMIR 117
>gi|425435720|ref|ZP_18816167.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC 9432]
gi|389679702|emb|CCH91533.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC 9432]
Length = 1025
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ R++++ L K GYR+ DGL AWE L+ + DL+L ++E+P ++G
Sbjct: 896 VLIVDDSLIVREMLAISLVKAGYRIEQAQDGLEAWEKLQA-GLACDLILCDIEMPRLNGL 954
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
LL+ + E + + IPV +++ + M KGA + +KP + L + Q +
Sbjct: 955 ELLSRLQEDEQLQGIPVAIIAYQGTQKMQHLAAAKGAKGYFVKPYIEDVLLSAAQRL 1011
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK----CRPHSIDLVLTEVELPS 99
VL+V+ + R+++S K GYRV DG AWE L+ C D+V ++E+P
Sbjct: 740 VLIVDDSITVRELLSLSFSKTGYRVEQARDGQEAWEKLRGGLPC-----DIVFCDIEMPR 794
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS 124
++G LL+ + ++ IPV +++
Sbjct: 795 MNGLELLSNLQKYPRLATIPVALLT 819
>gi|308233471|ref|ZP_07664208.1| two component transcriptional regulator, winged helix family
protein [Atopobium vaginae DSM 15829]
gi|328943477|ref|ZP_08240942.1| DNA-binding response regulator [Atopobium vaginae DSM 15829]
gi|327491446|gb|EGF23220.1| DNA-binding response regulator [Atopobium vaginae DSM 15829]
Length = 241
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+LLVE + + R ++A L + GY V +V DG +A E + HS DL++ ++ LP +SG
Sbjct: 7 RILLVEDEKTIRDAVAAYLEREGYFVRSVGDGQSALEEFE--KHSFDLIILDLMLPKLSG 64
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
+ V E N+P+IM++ + + + GA D+LIKP EL + + R
Sbjct: 65 ERVCRAVRE---TSNVPIIMLTAKGEVEDRIIGLELGADDYLIKPFSPRELVARVRALLR 121
Query: 163 R 163
R
Sbjct: 122 R 122
>gi|226227148|ref|YP_002761254.1| putative two-component hybrid sensor and regulator [Gemmatimonas
aurantiaca T-27]
gi|226090339|dbj|BAH38784.1| putative two-component hybrid sensor and regulator [Gemmatimonas
aurantiaca T-27]
Length = 885
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG- 102
+LLVE D + R+ ++LL + GYRV A AAWE L+ P D+VL++V +P +SG
Sbjct: 764 ILLVEDDGAVRKATTSLLTRAGYRVTAADSAFAAWELLEAMPEPPDMVLSDVVMPQVSGP 823
Query: 103 -FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
FA V IPV+ MS + V++ + + F+ KP +L
Sbjct: 824 EFAARVAVQ----YPTIPVLFMSGYADDDAVMQGIASNSLHFVAKPFSAGQL 871
>gi|168184125|ref|ZP_02618789.1| DNA-binding response regulator [Clostridium botulinum Bf]
gi|237794198|ref|YP_002861750.1| DNA-binding response regulator [Clostridium botulinum Ba4 str. 657]
gi|182672851|gb|EDT84812.1| DNA-binding response regulator [Clostridium botulinum Bf]
gi|229261611|gb|ACQ52644.1| DNA-binding response regulator [Clostridium botulinum Ba4 str. 657]
Length = 223
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +VL+VE D + R++ +L K GY+ DG +A + L IDL+++++ +P++
Sbjct: 1 MFKVLVVEDDPALRKLFCTVLNKNGYKSIEAKDGHSALDIL--YKEYIDLIISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ L L+ E + N+P++M++ ++ S + G D+++KP+ NE+
Sbjct: 59 DGYTLTKLIRESN--NNVPILMITAKETFSDKQEGFRVGTDDYMVKPIDVNEM 109
>gi|90658417|gb|ABD97105.1| SRR392 [Striga asiatica]
Length = 453
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 97 LPSISGFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+P + GF LL V +E D +PVIMMS DS ++V+K + GA D+LIKPVR L+N
Sbjct: 1 MPDMDGFKLLEHVGLEMD----LPVIMMSADDSKNVVMKGVTHGACDYLIKPVRMEALKN 56
Query: 156 LWQHVWR 162
+WQHV R
Sbjct: 57 IWQHVVR 63
>gi|384429931|ref|YP_005639292.1| two-component system response regulator protein [Xanthomonas
campestris pv. raphani 756C]
gi|341939035|gb|AEL09174.1| two-component system response regulator protein [Xanthomonas
campestris pv. raphani 756C]
Length = 451
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+++ D + + A LR G+ V A+ +G A L R +D+ + +P + G
Sbjct: 3 RILIIDDDAAFLATLQATLRSLGHSVIALDNGAAGVAQL--REGGVDMAFVDFRMPGMDG 60
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
A+L +H + +P++M++ + S S ++ M GA D L+KPV R E+ + Q
Sbjct: 61 IAVLRARQDHATARQVPLVMLTAYASSSNTIEAMTLGAFDHLVKPVGRAEIVEVVQ 116
>gi|316935701|ref|YP_004110683.1| Fis family two component sigma54 specific transcriptional regulator
[Rhodopseudomonas palustris DX-1]
gi|315603415|gb|ADU45950.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris DX-1]
Length = 495
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS--IDLVLTEVEL 97
MV R+L+ + D R+++ +++KCGY V G AA + L P S ID V+ ++ +
Sbjct: 1 MVERILIADDDAVQRRLVENMVQKCGYETITVDSGDAAVDALTA-PDSPAIDAVVLDLVM 59
Query: 98 PSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
P + G +L+ + + ++PVI+ + H I V+ M GA DF++KPV
Sbjct: 60 PGLDGLGVLSKIRASGI--DVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPV 108
>gi|343085497|ref|YP_004774792.1| Fis family transcriptional regulator [Cyclobacterium marinum DSM
745]
gi|342354031|gb|AEL26561.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Cyclobacterium marinum DSM 745]
Length = 455
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 10/126 (7%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRV---AAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
++LL+E D + +IIS L K GY V V +GL+ +E H +DL++T+ LP
Sbjct: 3 KILLIEDDLTYSKIISKFLEKNGYEVMNSTKVSEGLSYFEK-----HQVDLIITDYRLPD 57
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+G +L V+ PVI+++ + I +K M GA +++ KP++ +EL Q
Sbjct: 58 GTGMEILDQVLNDQ--PTFPVILITNYSDIRTAVKSMKMGAFEYITKPIQPDELLLTVQQ 115
Query: 160 VWRRHS 165
+ S
Sbjct: 116 ALKNES 121
>gi|170761841|ref|YP_001786289.1| DNA-binding response regulator [Clostridium botulinum A3 str. Loch
Maree]
gi|169408830|gb|ACA57241.1| DNA-binding response regulator [Clostridium botulinum A3 str. Loch
Maree]
Length = 223
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +VL+VE D + R++ +L K GY+ DG +A + L IDL+++++ +P++
Sbjct: 1 MFKVLVVEDDPALRKLFCTVLNKNGYKSIEAKDGDSALDVL--YKEYIDLIISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ L L+ E + N+P++M++ ++ S + G D+++KP+ NE+
Sbjct: 59 DGYTLTKLIRESN--NNVPILMITAKETFSDKQEGFRVGTDDYMVKPIDVNEM 109
>gi|15614827|ref|NP_243130.1| two-component response regulator [Bacillus halodurans C-125]
gi|10174883|dbj|BAB05983.1| two-component response regulator [Bacillus halodurans C-125]
Length = 231
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M RVL+V+ + + +I+ + + GY V GLAA + LK P DLVL ++ LP
Sbjct: 1 MERRVLVVDDEKKMQVLITVCVSEAGYLVQTAASGLAAMDRLKAEP--FDLVLLDIMLPD 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+ GF+L+ + + +++ +IM++ +++ + +GA D+++KP +EL
Sbjct: 59 VDGFSLIAQL--RHLQEDVAIIMLTALGETEHIVRGLNEGADDYIVKPFEPDELNARILS 116
Query: 160 VWRRHSLLGGH--------VPQNLHDVYHKGGAI 185
V RR L V + HD+ G ++
Sbjct: 117 VLRRKGGLASRKGEEKQLKVNEKAHDISFAGQSL 150
>gi|406962786|gb|EKD89036.1| response regulator [uncultured bacterium]
Length = 309
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+++LL E D +T I+SA+L+K GY V DG AWETL+ +P LV+ + +P +
Sbjct: 5 MKILLAEDDLTTSAILSAVLKKWGYEPILVKDGQEAWETLQ-QPDCPSLVILDWLMPRMQ 63
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
G ++ V V K +I+++ D + +L + GA D++ KP ELR
Sbjct: 64 GLEVIQHVRAKIVDKPPYIILLTSKDEMESILSGLEAGANDYIKKPFDNAELR 116
>gi|293611006|ref|ZP_06693305.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423867|ref|ZP_18914008.1| Hpt domain protein [Acinetobacter baumannii WC-136]
gi|292826658|gb|EFF85024.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699527|gb|EKU69142.1| Hpt domain protein [Acinetobacter baumannii WC-136]
Length = 1501
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Query: 43 RVLLVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPS 99
R L++ DDS R++ S LL + GY V DG+ A E L+ +P DL+L ++E+P
Sbjct: 1375 RRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKP---DLMLLDIEMPR 1431
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMS 124
+ GF +L LV HD+ ++IPVIM++
Sbjct: 1432 MDGFEVLNLVRHHDLHQDIPVIMIT 1456
>gi|224372199|ref|YP_002606571.1| chemotaxis response regulator [Nautilia profundicola AmH]
gi|223588330|gb|ACM92066.1| chemotaxis response regulator [Nautilia profundicola AmH]
Length = 125
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYR-VAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+++L+V+ + R+II L + GY+ V DG+ AWE ++ P I +V+T+ +P++
Sbjct: 1 MKILVVDDSSTMRRIIVNTLARLGYKDVVQAADGVEAWEVMQANP-DIGVVITDWNMPNM 59
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
+G L+ + + K+IP+IM++ + V+ + G ++++KP L+ Q V
Sbjct: 60 NGLELVKKIRAEEKYKDIPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLQAV 119
>gi|406946398|gb|EKD77619.1| hypothetical protein ACD_42C00267G0001 [uncultured bacterium]
Length = 226
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVLLVE D+ I + L+ G+ V V DG +A+E L + + D+V+ ++ LP +S
Sbjct: 1 MRVLLVEDDELLGDGIYSGLKHYGHTVDWVKDGKSAYEALSRKQENFDVVVLDLGLPKMS 60
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G +L + E ++ +PV++++ D++ ++ + GA D+L+KP +EL + +
Sbjct: 61 GLDILKRIREKNI--PVPVLILTAKDTVESRVQGLDAGADDYLLKPFDLDELCARMRALQ 118
Query: 162 RR 163
RR
Sbjct: 119 RR 120
>gi|225174332|ref|ZP_03728331.1| two component transcriptional regulator, winged helix family
[Dethiobacter alkaliphilus AHT 1]
gi|225170117|gb|EEG78912.1| two component transcriptional regulator, winged helix family
[Dethiobacter alkaliphilus AHT 1]
Length = 224
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +L+VE D + ++++ A+LR+ GY V DG+ A E L +DL++ ++ +P++
Sbjct: 1 MFNILVVEDDRNLQKLMKAVLRQNGYNVLCAEDGVQALELLDSA--HVDLIICDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+AL + + + N+PV+M++ ++ K L G D+++KPV +E+
Sbjct: 59 DGYALTDTLRKAN--NNLPVLMVTARETFDDKKKGFLVGTDDYMVKPVDMDEM 109
>gi|297612639|ref|NP_001066118.2| Os12g0139400 [Oryza sativa Japonica Group]
gi|87116390|dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa Japonica Group]
gi|108862172|gb|ABA96406.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|118790800|tpd|FAA00261.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218186409|gb|EEC68836.1| hypothetical protein OsI_37415 [Oryza sativa Indica Group]
gi|222616614|gb|EEE52746.1| hypothetical protein OsJ_35177 [Oryza sativa Japonica Group]
gi|255670034|dbj|BAF29137.2| Os12g0139400 [Oryza sativa Japonica Group]
Length = 201
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 14/135 (10%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS-------------- 87
VL V+ R++I LL+ ++V V G A E L H
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVG 68
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL + E ++IPV++MS + S + +C+ +GA +F +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKP 128
Query: 148 VRRNELRNLWQHVWR 162
VR +++ L H+ +
Sbjct: 129 VRLSDMSKLKPHILK 143
>gi|188591031|ref|YP_001795631.1| c4-dicarboxylate transport transcriptional response regulator
[Cupriavidus taiwanensis LMG 19424]
gi|170937925|emb|CAP62909.1| transcriptional response regulator, C4-DICARBOXYLATE TRANSPORT
RESPONSE REGULATOR [Cupriavidus taiwanensis LMG 19424]
Length = 445
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL VE + RQ + L G+RV A+P AA L + V+T+V LP S
Sbjct: 9 LRVLFVEDEPLVRQATAQSLELAGFRVLALPSAEAAIPHLHGAFAGV--VVTDVRLPGAS 66
Query: 102 GFALLTLVMEHDVCKN----IPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLW 157
G LL +H C+N +PVI+++ H I+M ++ M +GA DF+ KP + L +
Sbjct: 67 GLDLL----QH--CRNAAPGVPVILVTGHGDITMAVQAMREGAYDFIEKPFGADRLTDTV 120
Query: 158 QHVWRRHSL 166
+ R +L
Sbjct: 121 RRALERRAL 129
>gi|254459178|ref|ZP_05072600.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|373868639|ref|ZP_09605037.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|207084071|gb|EDZ61361.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|372470740|gb|EHP30944.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
Length = 639
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ R +IS LLR+ + V DG A L P I+LV+T+ E+P+++G
Sbjct: 127 ILVVDDSALFRLMISNLLRRHKFHVLEAEDGKIALNILNKNP-DINLVITDYEMPNMNGL 185
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
L+ V + K+IP+I++S D+ S ++ CM GA D+L KP + E
Sbjct: 186 ELIKSVRNNHKLKDIPMIVISSVDAQSTIVDCMKHGANDYLHKPFSKGEF 235
>gi|399522080|ref|ZP_10762745.1| integral membrane sensor hybrid histidine kinase [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399110115|emb|CCH39305.1| integral membrane sensor hybrid histidine kinase [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 574
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVEADDSTRQIIS-ALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
VL+VE D++ Q+++ +L K GYRV +G A E L R ++D VL + ++P + G
Sbjct: 445 VLIVE-DNAINQLVTRGMLLKLGYRVRTADNGAEALELL--RSETVDAVLLDCQMPVMDG 501
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW- 161
FA + C +PV+ ++ H +C+ G +D+L KPV+ +ELR L H W
Sbjct: 502 FATCRALRALPGCAELPVLAITAHSHSGDRERCLAAGMSDYLAKPVKFDELRVLL-HDWV 560
Query: 162 --RRHSLLGGHVP 172
R ++ GG P
Sbjct: 561 LCRPATVSGGAAP 573
>gi|365986136|ref|XP_003669900.1| hypothetical protein NDAI_0D03430 [Naumovozyma dairenensis CBS 421]
gi|343768669|emb|CCD24657.1| hypothetical protein NDAI_0D03430 [Naumovozyma dairenensis CBS 421]
Length = 597
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 8 VSSEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYR 67
VSS D+D++ E S + + VLLVE D + Q+ S LRK G
Sbjct: 396 VSSISKSDVDIKQENSQSPTATEELRKGY------HVLLVEDDAVSIQLCSKFLRKSGCT 449
Query: 68 VAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHD 127
V V DGLAA L+ DLVL ++ +P++ G +++ D K P+I M+ +
Sbjct: 450 VEVVTDGLAAISILEA--FRYDLVLMDIVMPNLDGATATSIIRNFD--KETPIIAMTGNI 505
Query: 128 SISMVLKCMLKGAADFLIKPVRRNELRN-LWQHVWRRHSL 166
++ + G D L KP R++L + L +H+ +R L
Sbjct: 506 EDQDLITYLQHGMTDILAKPFTRDDLLSMLIRHLSKRIPL 545
>gi|328952553|ref|YP_004369887.1| multi-sensor signal transduction histidine kinase [Desulfobacca
acetoxidans DSM 11109]
gi|328452877|gb|AEB08706.1| multi-sensor signal transduction histidine kinase [Desulfobacca
acetoxidans DSM 11109]
Length = 501
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ + R + +L+ GY+VA +G A E L+ P I+LVL ++++P +
Sbjct: 7 ILVVDDEKVIRDGCALILQPEGYQVATAANGQEALEILRTEP--INLVLCDLKMPVMGAL 64
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+L + H +P+I+++ H +++ ++CM KGA DF+ KP R + L + + V +
Sbjct: 65 EVLEVAGTH--YPEVPIIIITGHGTVANAVECMQKGAYDFVTKPFRVDHLTLVVKRVLEK 122
Query: 164 HSL 166
L
Sbjct: 123 QKL 125
>gi|296090338|emb|CBI40157.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 18/135 (13%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCR--------PHS-------- 87
++ DDS R++I LL+ Y+V AV G A E L + P S
Sbjct: 11 VLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQRNLSPPSLCPSQEME 70
Query: 88 IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKP 147
++L++T+ +P ++G+ LL + E K+IPV++MS + S + +C+ +GA DF +KP
Sbjct: 71 VNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKP 130
Query: 148 VRRNELRNLWQHVWR 162
V+ +++ L H+ +
Sbjct: 131 VQLSDVNKLRPHLLK 145
>gi|150017333|ref|YP_001309587.1| two component transcriptional regulator [Clostridium beijerinckii
NCIMB 8052]
gi|149903798|gb|ABR34631.1| two component transcriptional regulator, winged helix family
[Clostridium beijerinckii NCIMB 8052]
Length = 225
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +L+VE D R++ S +L K GY+ DG+ A L IDL+++++ +P++
Sbjct: 1 MFHILIVEDDKELRELFSTVLLKNGYKTTGAKDGIEALNVLD--KEYIDLIISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF L+ + D N+P++M++ + + L G D+++KP+ NE+
Sbjct: 59 DGFELIKSI--RDAQFNLPILMITAKERFQDKQRGFLLGIDDYMVKPIDVNEM 109
>gi|386381303|ref|ZP_10067070.1| two-component system response regulator [Streptomyces tsukubaensis
NRRL18488]
gi|385671243|gb|EIF94219.1| two-component system response regulator [Streptomyces tsukubaensis
NRRL18488]
Length = 255
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
L VLLVE DD+ R+ + L + GYRV DGL E + H DL++ +V LP +
Sbjct: 27 LSVLLVEDDDAIRRSVQLALERYGYRVTVAADGLGGLEAFRAGGH--DLLILDVMLPELD 84
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
G L + E +PV+MMS V+ + GA D+++KPV
Sbjct: 85 GIGLCCRIREQ---SQVPVLMMSARGDALDVVAGLEAGADDYVVKPV 128
>gi|297842233|ref|XP_002888998.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
gi|297334839|gb|EFH65257.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC---------RPHSIDLVL 92
L VL V+ R++I LL+ +V V G A + L + ++L++
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDHGSSGLKDLKVNLIV 77
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+ +P ++G+ LL + E + IPV++MS + + +CM++GA DFL+KPV+ +
Sbjct: 78 TDYSMPGLTGYELLKKIKESSAFREIPVVIMSSENIQPRIEQCMIEGAEDFLLKPVKLAD 137
Query: 153 LRNLWQHVWR 162
++ L + + R
Sbjct: 138 VKRLKELIMR 147
>gi|408369246|ref|ZP_11167027.1| two component sigma-54 specific Fis family transcriptional
regulator [Galbibacter sp. ck-I2-15]
gi|407744992|gb|EKF56558.1| two component sigma-54 specific Fis family transcriptional
regulator [Galbibacter sp. ck-I2-15]
Length = 450
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++LL+E D + ++ L+K G++V A A + +K +S DLV T++ LP G
Sbjct: 3 KILLIEDDVTFSAMLERFLKKNGFQVDATYSSEEAQKNMKG--NSYDLVFTDLRLPDDDG 60
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
++LT V D + PVI+M+ + +S +K M KGA D++ KP ++E+ + ++ +
Sbjct: 61 ISVLTKV--KDQFPDTPVILMTGYAEVSTAVKAMKKGAFDYISKPFNQDEVLAVIRNALK 118
Query: 163 RH 164
+
Sbjct: 119 KE 120
>gi|331268264|ref|YP_004394756.1| winged helix family two component transcriptional regulator
[Clostridium botulinum BKT015925]
gi|329124814|gb|AEB74759.1| two component transcriptional regulator, winged helix family
[Clostridium botulinum BKT015925]
Length = 216
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+L+VE D + +I L+ GY V DG A E IDLVL +V LP I
Sbjct: 1 MRILVVEDDLAIGDLIEINLQMSGYEVLKAIDGEEAKEVFD--KEDIDLVLLDVMLPKID 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF L+ + + K+IPVI ++ +S+ +K + GA D+++KP EL + V
Sbjct: 59 GFQLIKYIKK----KDIPVIFLTAKNSVIDKVKGLRLGADDYIVKPFENIELLARIEVVE 114
Query: 162 RRHS 165
RR++
Sbjct: 115 RRYN 118
>gi|404495822|ref|YP_006719928.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
gi|418067744|ref|ZP_12705078.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter metallireducens RCH3]
gi|78193436|gb|ABB31203.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
gi|373558248|gb|EHP84600.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter metallireducens RCH3]
Length = 454
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M RVL+++ +++ R ++ A+LRK GY DG A P+ D ++ ++ +P
Sbjct: 1 MKQRVLVIDDEENLRHMLGAMLRKNGYHADEAADGEQALAMAGEHPY--DFIICDIRMPV 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
+ G L E + I IMMS + +I L+CM +GA D++ KP + +E+ + +
Sbjct: 59 LDGLGFLRRAQEAGIGGTI--IMMSAYGTIDTALQCMKEGAYDYVSKPFKNDEILLVLKK 116
Query: 160 VWRRHSL 166
R L
Sbjct: 117 AEERERL 123
>gi|320354561|ref|YP_004195900.1| Fis family two component sigma54 specific transcriptional regulator
[Desulfobulbus propionicus DSM 2032]
gi|320123063|gb|ADW18609.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobulbus propionicus DSM 2032]
Length = 460
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ + S R+ + LL K GY+VA DG AA E + + DLV+T++ +P +SG
Sbjct: 6 ILVVDDELSMREFLKILLEKEGYQVATAADGQAALE--RAEKTAFDLVITDIRMPGMSGL 63
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL + + +I VIM++ S + M GA D++ KP +E++ + + V ++
Sbjct: 64 DLLARL--KQLQADIGVIMITAFASPDDAVTAMKSGAFDYITKPFNVDEIKTVIRAVLKK 121
Query: 164 H 164
Sbjct: 122 R 122
>gi|167579287|ref|ZP_02372161.1| DNA-binding response regulator [Burkholderia thailandensis TXDOH]
Length = 225
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+++LLVE + I LLR G+ V + PDG +A LK + + D +L ++ LP +S
Sbjct: 1 MKLLLVEDNAELAHWIVDLLRGEGFGVDSAPDGESADTVLKAQRY--DALLLDMRLPGMS 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL + N+PV+M++ H S+ + C GA D+++KP EL + +
Sbjct: 59 GKELLARLRRRG--DNVPVLMLTAHGSVDDKVDCFSAGADDYVVKPFESRELVARIRALI 116
Query: 162 RRHSLLGG 169
RR +G
Sbjct: 117 RRQCGVGA 124
>gi|167560951|ref|ZP_02353867.1| DNA-binding response regulator [Burkholderia oklahomensis EO147]
Length = 159
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+++LLVE + I LLR G+ V + PDG +A LK + + D +L ++ LP +S
Sbjct: 1 MKLLLVEDNAELAHWIVDLLRGEGFGVDSAPDGESADTVLKAQRY--DALLLDMRLPGMS 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G LL + N+PV+M++ H S+ + C GA D+++KP EL + +
Sbjct: 59 GKELLARLRRRG--DNVPVLMLTAHGSVDDKVDCFSAGADDYVVKPFESRELVARIRALI 116
Query: 162 RRHSLLGG 169
RR +G
Sbjct: 117 RRQCGVGA 124
>gi|121606574|ref|YP_983903.1| two component transcriptional regulator [Polaromonas
naphthalenivorans CJ2]
gi|120595543|gb|ABM38982.1| two component transcriptional regulator, winged helix family
[Polaromonas naphthalenivorans CJ2]
Length = 231
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L++E DD R ++ LL++ G+ V DGLAA L ID VL ++ LP + G
Sbjct: 4 LLIIEDDDLLRDGLTDLLKQTGHTVCNSADGLAAQTLLN--EQVIDAVLLDLGLPRLDGM 61
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+LL + + +++PV++++ D ++ ++ +L+GA D+L KP EL Q + RR
Sbjct: 62 SLLRWIRQR--FESLPVMILTARDGVNDRVEGLLEGADDYLTKPFNNAELSARVQALLRR 119
Query: 164 HSL 166
L
Sbjct: 120 ARL 122
>gi|150018187|ref|YP_001310441.1| two component transcriptional regulator [Clostridium beijerinckii
NCIMB 8052]
gi|149904652|gb|ABR35485.1| two component transcriptional regulator, winged helix family
[Clostridium beijerinckii NCIMB 8052]
Length = 218
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M + +L+VE D++ +I L GY+ DG+ A+ +K S DL+L ++ LP
Sbjct: 1 MKINILIVEDDEAISNLIRISLGMAGYQCKQTFDGMEAFNLIK--QESFDLILMDIMLPG 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
I GF L+ + N+PVI ++ + ++ + + GA D+++KP EL +
Sbjct: 59 IDGFELMKRIKS----LNVPVIFLTAKNGLADKITGLKSGAEDYIVKPFETVELLARIEI 114
Query: 160 VWRRHS 165
V RR+S
Sbjct: 115 VLRRYS 120
>gi|387817184|ref|YP_005677528.1| two-component system response regulator QseB [Clostridium botulinum
H04402 065]
gi|322805225|emb|CBZ02789.1| two-component system response regulator QseB [Clostridium botulinum
H04402 065]
Length = 223
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +VL+VE D + R++ +L K GY+ DG +A + L IDL+++++ +P++
Sbjct: 1 MFKVLVVEDDPALRKLFCTVLNKNGYKSIEAKDGDSALDIL--YKEYIDLIISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ L L+ E + N+P++M++ ++ S + G D+++KP+ NE+
Sbjct: 59 DGYTLTKLIRESN--NNVPILMITAKETFSDKQEGFRVGTDDYMVKPIDVNEM 109
>gi|187778014|ref|ZP_02994487.1| hypothetical protein CLOSPO_01606 [Clostridium sporogenes ATCC
15579]
gi|187774942|gb|EDU38744.1| response regulator receiver domain protein [Clostridium sporogenes
ATCC 15579]
Length = 223
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSI 100
+ +VL+VE D + R++ +L K GY+ DG +A + L IDL+++++ +P++
Sbjct: 1 MFKVLVVEDDPALRKLFCTVLNKNGYKSIEAKDGDSALDIL--YKEYIDLIISDIMMPNM 58
Query: 101 SGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ L L+ E + N+P++M++ ++ S + G D+++KP+ NE+
Sbjct: 59 DGYTLTKLIRESN--NNVPILMITAKETFSDKQEGFRVGTDDYMVKPIDVNEM 109
>gi|392378909|ref|YP_004986068.1| two-component hybrid sensor and regulator [Azospirillum brasilense
Sp245]
gi|356881276|emb|CCD02261.1| two-component hybrid sensor and regulator [Azospirillum brasilense
Sp245]
Length = 1264
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 19/154 (12%)
Query: 45 LLVEADDSTRQIISA-LLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+ D++T Q+I+A LLR+ G+ V V DG+ A E + RP+ DLVL +V++P+++GF
Sbjct: 1005 ILIAEDNATNQLIAATLLRRAGFTVDIVDDGVQALEAMSLRPY--DLVLMDVQMPNLTGF 1062
Query: 104 ALLTLVMEHDVC-----KNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR---N 155
EH +PVI ++ I +C+ G D + KP R+ L N
Sbjct: 1063 E----ATEHIRALRGPRATVPVIALTADAMIETRERCLRAGMNDVVTKPFERSALLGVIN 1118
Query: 156 LWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENN 189
W + R G H+ + D + G A S+N+
Sbjct: 1119 RWLDMGRGA---GQHLRLAVDD-HRTGQARSDND 1148
>gi|302535152|ref|ZP_07287494.1| phosphate regulon transcriptional regulatory protein PhoB
[Streptomyces sp. C]
gi|302444047|gb|EFL15863.1| phosphate regulon transcriptional regulatory protein PhoB
[Streptomyces sp. C]
Length = 237
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSISG 102
VL VE DD R+ + L + G+ V A+PDGL+ E+ + RP D+ L +V +P + G
Sbjct: 6 VLFVEDDDVIREATTLALERDGFVVTAMPDGLSGLESFRANRP---DIALLDVMVPGMDG 62
Query: 103 FALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
+L + + +PVIM+S DSI +VL + GA D++ KP + L + V
Sbjct: 63 VSLCRRIRDE---STVPVIMLSARADSIDVVLG-LEAGADDYVTKPFDGSVLVARIRAVL 118
Query: 162 RRHSLLGGHVPQN 174
RR GG PQN
Sbjct: 119 RRFGHAGG--PQN 129
>gi|255564944|ref|XP_002523465.1| receptor histidine kinase, putative [Ricinus communis]
gi|223537293|gb|EEF38924.1| receptor histidine kinase, putative [Ricinus communis]
Length = 185
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC----------RPHSIDLV 91
+ VL V+ R+I+ LL+ ++V +V +G A E L ID++
Sbjct: 19 IHVLAVDDCFLDRKIVEKLLKNASFKVTSVDNGKKAMEILGLSQDKVDKSTYNDQKIDII 78
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
LT+ +P ++G+ LL V H K+IPV+++S + +C+ GA DFL KP+++
Sbjct: 79 LTDYCMPEMNGYDLLMAVKGHSNVKSIPVVIISSEYDPQRISRCLANGAEDFLQKPLQQK 138
Query: 152 ELRNLWQH 159
+L+ L +
Sbjct: 139 DLQKLRSY 146
>gi|385811128|ref|YP_005847524.1| response regulator [Ignavibacterium album JCM 16511]
gi|383803176|gb|AFH50256.1| Response regulator [Ignavibacterium album JCM 16511]
Length = 116
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 49 ADDS--TRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALL 106
ADDS R++I+ L GY + +V DG+ A E L +IDL++T++ +P++ GF L+
Sbjct: 3 ADDSPIIRKLITFSLSVKGYEIISVSDGMEALEMLP--RENIDLLITDLNMPNVDGFELI 60
Query: 107 TLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
+ E+D KN P+I++S + + + GA +LIKP + +
Sbjct: 61 KAIRENDDLKNTPIIVLSNLSETGDIERALHYGADSYLIKPFEQKTI 107
>gi|374813490|ref|ZP_09717227.1| acetoacetate metabolism regulatory protein AtoC [Treponema primitia
ZAS-1]
Length = 452
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
M R+L+V+ + + R+ ++A L GY+V DG A ++ + R IDL++T++ +P
Sbjct: 1 MQFRILVVDDEKNIREGLAASLEMDGYQVETAADGDAGFK--RFRKGDIDLLITDLRMPG 58
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
ISG LL V IPVI+++ H ++ + M GA DFL KPV
Sbjct: 59 ISGEELLKKVDSE--TPGIPVIVLTGHGTVENAVAAMRNGAYDFLTKPV 105
>gi|242084508|ref|XP_002442679.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
gi|241943372|gb|EES16517.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
Length = 236
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRP-HS------------I 88
VL V+ R++I LL+ ++V V G A + L HS +
Sbjct: 45 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDDHSPVPVHTDQLDVAV 104
Query: 89 DLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
+L++T+ +P ++G+ LL + E ++IPV++MS + S + +C+ +GA +F +KPV
Sbjct: 105 NLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPV 164
Query: 149 RRNELRNLWQHVWR 162
R +++ L H+ +
Sbjct: 165 RLSDMNKLKPHILK 178
>gi|34498703|ref|NP_902918.1| hypothetical protein CV_3248 [Chromobacterium violaceum ATCC 12472]
gi|34332873|gb|AAQ60912.2| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472]
Length = 1480
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 30 RTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSID 89
RTRW+ LRVLLVE D R++ ALL+ G +G A E ++ P
Sbjct: 1140 RTRWDG------LRVLLVEDDAINREVAQALLQDVGLEADMAENGKIAVERVQAAPARYA 1193
Query: 90 LVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVR 149
L+L +V++P + G + D +NIP++ M+ + C G DF+ KPV
Sbjct: 1194 LILMDVQMPEMDGLEATRRIRALDAGENIPIMAMTANAFAEDRSACREAGMNDFVAKPVD 1253
Query: 150 RNEL 153
++L
Sbjct: 1254 PDQL 1257
>gi|146329623|ref|YP_001209981.1| twitching motility regulator PilG [Dichelobacter nodosus VCS1703A]
gi|146233093|gb|ABQ14071.1| twitching motility regulator PilG [Dichelobacter nodosus VCS1703A]
Length = 127
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+++L+V+ + R+ A+L K G++VA DG AA+ K S ++ ++ +P +
Sbjct: 8 VKILIVDDSGTIRKTAEAILGKEGFQVATAEDGFAAFS--KIIEFSPSIIFLDIMMPRLD 65
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
G+ + +++ + KNIPVIM+S DS+ + + G+ F+ KP R+EL
Sbjct: 66 GYQVCSVIKSNPEYKNIPVIMLSSKDSVFDKARGKIAGSEHFMTKPFSRDEL 117
>gi|297837533|ref|XP_002886648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332489|gb|EFH62907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 43 RVLLVEADDS--TRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------IDLV 91
+V ++ DDS R +I LLR +V AV G A E L +DL+
Sbjct: 32 QVHVLAVDDSLLDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDKKAAVEFDRLKVDLI 91
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
+T+ +P ++G+ LL + E K +PV++MS + I+ + +C+ +GA DFL+KPV+
Sbjct: 92 ITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVITRIDRCLEEGAEDFLLKPVKLA 151
Query: 152 ELRNL 156
+++ L
Sbjct: 152 DVKRL 156
>gi|343492741|ref|ZP_08731095.1| transcriptional regulatory protein CpxR [Vibrio nigripulchritudo
ATCC 27043]
gi|342826861|gb|EGU61268.1| transcriptional regulatory protein CpxR [Vibrio nigripulchritudo
ATCC 27043]
Length = 252
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++LLVE D +SALL Y V + G A E LK HS DL++ +V+LP + G
Sbjct: 24 KLLLVEDDPDLNSQLSALLSSQQYEVTSYESGSKALECLKT--HSFDLIILDVDLPDVDG 81
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
F LL V EH + PV+M++ + + ++ + GA D++ KP EL + + R
Sbjct: 82 FELLNYVREH---SSTPVVMLTAYGAEEHRIRGLRFGADDYVSKPCSFTELCLRIEGILR 138
Query: 163 R 163
R
Sbjct: 139 R 139
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,261,905,493
Number of Sequences: 23463169
Number of extensions: 474070331
Number of successful extensions: 1196285
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9321
Number of HSP's successfully gapped in prelim test: 58242
Number of HSP's that attempted gapping in prelim test: 1136128
Number of HSP's gapped (non-prelim): 80581
length of query: 720
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 570
effective length of database: 8,839,720,017
effective search space: 5038640409690
effective search space used: 5038640409690
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 81 (35.8 bits)