BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042954
(720 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 247/681 (36%), Positives = 334/681 (49%), Gaps = 101/681 (14%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
+R LPRM +RVLL E DDSTR II ALLRKCGYRVAA DG+ AW+ LK + +IDL
Sbjct: 32 SRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDL 91
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
VLTEVELP +SGF LL+ +MEHD CKNIPVIMMS +DS+SMV KCMLKGAADFL+KP+R+
Sbjct: 92 VLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRK 151
Query: 151 NELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
NELRNLWQHVWR+ G + DV H E+N+ H + +E
Sbjct: 152 NELRNLWQHVWRKQLSSG------VLDVQHTQ---QEDNLTERHEQKTGVTK-----AEH 197
Query: 211 VSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPE 270
V+ E+ +NM+ Q + + Q+ C + E E+
Sbjct: 198 VT--------------ENVVHKNMECSEQ------------ESDAQSSCTRSELEA---- 227
Query: 271 SKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADIT 330
+ ++ L + + R S+ D E++ G T +G R D +
Sbjct: 228 -DSRQTNNLLEYKQPMGRHFSK----PDHKNTEKNGG---TKIHASNDGNLIPRREEDAS 279
Query: 331 YGIHGC-NDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNR--TKKCEF 387
C ND E +S ++L+ DN Q+ N + ++ ++R KC
Sbjct: 280 LRRMTCSNDINCEKASRDMELVHIIDNQQK-------NNTHMEMDVARANSRGNDDKCFS 332
Query: 388 SP--HLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELKDGS 445
P LELSLR+S S Q +ER TLNHS +S FS YN A T + A+ S
Sbjct: 333 IPAHQLELSLRRSDYSRLESQEKNERRTLNHSTSSPFSLYNCRTASSTINAGDAQACSTS 392
Query: 446 SKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPG 505
+ ++ EN G + S + RE Q V F +PV G
Sbjct: 393 ATHIDL------ENKNGDSK---TPSQDKRET------NQPPIRVVPFP------VPVGG 431
Query: 506 VRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVY 565
+ FD S+FY +S P W+ +S ++ IS + P D++QV
Sbjct: 432 LTFDGQPFWNGAPVASLFYPQSA-PPIWNSKTSTWQDATTQAISLQ-QNGPKDTDTKQVE 489
Query: 566 GRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDR 625
+ + + P ++ RH SP +S +S + + A + SG+
Sbjct: 490 NVEEQTARSHLSANRKHLRIEIPTDEPRHVSPTTGESGSSTVLDS-ARKTLSGSVCDSSS 548
Query: 626 NSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVR 685
N A + VP+N +G RH SQR+AAL KFRLKRKDRC++KKVR
Sbjct: 549 NHMIAPTESSNVVPENPDGL-------------RHLSQREAALNKFRLKRKDRCFEKKVR 595
Query: 686 YQSRKSLAEQRPRVKGQFVRQ 706
YQSRK LAEQRPRVKGQFVRQ
Sbjct: 596 YQSRKLLAEQRPRVKGQFVRQ 616
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 252 bits (643), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 156/214 (72%), Gaps = 11/214 (5%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
+WE FLP++ LRVLLVEADDSTRQII+ALLRKC YRVAAVPDGL AWE LK +P S+DL
Sbjct: 39 VKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDL 98
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
+LTEV+LPSISG+ALLTL+MEHD+CKNIPVIMMS DS++ V KCMLKGAAD+L+KP+RR
Sbjct: 99 ILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRR 158
Query: 151 NELRNLWQHVWRRH-SLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSE 209
NELRNLWQHVWRR SL P N K S NN ++ D+ S N G
Sbjct: 159 NELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANN-SNGKRDDHVVSG--NGG-- 213
Query: 210 KVSDAQSSRTSSPYLEAESAYMQ-NMQGLSQLKC 242
DAQSS T P +E ESA ++ + + Q++C
Sbjct: 214 ---DAQSSCT-RPEMEGESADVEVSARDAVQMEC 243
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 47/50 (94%)
Query: 659 RHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVK 708
+ S QR+AALTKFR+KRKDRCY+KKVRY+SRK LAEQRPR+KGQFVRQV+
Sbjct: 504 QQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQ 553
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/167 (71%), Positives = 140/167 (83%), Gaps = 9/167 (5%)
Query: 3 MGEVVV-SSEGGMDIDLETEKD--GSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISA 59
MGE+VV SS+ GM ET K+ SSEVV+ WE +LP+ VLRVLLVE+D STRQII+A
Sbjct: 1 MGEIVVLSSDDGM----ETIKNRVKSSEVVQ--WEKYLPKTVLRVLLVESDYSTRQIITA 54
Query: 60 LLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIP 119
LLRKC Y+V AV DGLAAWE LK + H+IDL+LTE++LPSISGFALL LVMEH+ CKNIP
Sbjct: 55 LLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIP 114
Query: 120 VIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSL 166
VIMMS DSI MVLKCML+GAAD+LIKP+R+NEL+NLWQHVWRR +L
Sbjct: 115 VIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTL 161
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V
Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTV 460
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAW 78
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW
Sbjct: 58 QTDEQKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAW 117
Query: 79 ETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK 138
+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS+ V KC+ K
Sbjct: 118 QCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSK 177
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHVWRR 202
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 710
R+AAL KFR KRK R + KKVRYQSRK LAEQRPR++GQFVRQ E
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 107/145 (73%)
Query: 19 ETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAW 78
+T++ +V RWE FLP LRVLLVE DDSTRQ++SALLRKC Y V +GL AW
Sbjct: 58 QTDEQKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAW 117
Query: 79 ETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLK 138
+ L+ + IDLVLTEV +P +SG LL+ + H +CK+IPVIMMS +DS+ V KC+ K
Sbjct: 118 QCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSK 177
Query: 139 GAADFLIKPVRRNELRNLWQHVWRR 163
GA DFL+KP+R+NEL+NLWQHVWRR
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHVWRR 202
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 710
R+AAL KFR KRK R + KKVRYQSRK LAEQRPR++GQFVRQ E
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE F+ + ++VLLV++DDSTRQ++SALLR C Y V +G AW L+ +SIDLVL
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ +M H++CKNIPVIMMS +D++ V KC+ KGA DFL+KP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 725
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 102/131 (77%)
Query: 33 WESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVL 92
WE F+ + ++VLLV++DDSTRQ++SALLR C Y V +G AW L+ +SIDLVL
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
TEV +P +SG +LL+ +M H++CKNIPVIMMS +D++ V KC+ KGA DFL+KP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 153 LRNLWQHVWRR 163
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 664 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV 707
R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ
Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 725
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Query: 10 SEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVA 69
S GG+ I L + + WE FL +RVLLVE DD TR I++ALLR C Y V
Sbjct: 51 SSGGLQIPLSQQTAAT-----VCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVV 105
Query: 70 AVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSI 129
+G+ AW+ L+ + ID+VLTEV +P +SG LL ++ H +NIPVIMMS HDS+
Sbjct: 106 EASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSM 165
Query: 130 SMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
+V KC+ KGA DFL+KP+R+NEL+ LWQHVWRR
Sbjct: 166 GLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRR 199
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
SQR+AALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVR+ T D
Sbjct: 667 SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDD 718
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 36 FLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEV 95
F+ R +R+LL ++D S+ + + LL C Y+V L C ID++L EV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 96 ELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
+LP F +L + + ++IP+IMMS D +S+V+KC+ GAA++L+KP+R NEL N
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 156 LWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQ 215
LW HVWRR +LG +D + A+SE + A+++S+ + +K E ++
Sbjct: 142 LWTHVWRRRRMLGLSEKNFFNDNFEL--ALSEPSDANTNSTTLLSDDTDDKPKENINQET 199
Query: 216 SSRTSSPY 223
S+ Y
Sbjct: 200 STSNQHEY 207
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 40/46 (86%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
S +R AAL KFRLKRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ
Sbjct: 440 SERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQ 485
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 80/135 (59%)
Query: 34 ESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLT 93
+ F+ R +R+LL + D ++ + LL +C Y+V AV + L ID++L
Sbjct: 11 DGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILA 70
Query: 94 EVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
E++LP G +L + + IPVIMMS D + +V+KC+ GAAD+L+KP+R NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNEL 130
Query: 154 RNLWQHVWRRHSLLG 168
NLW H+WRR +LG
Sbjct: 131 LNLWTHMWRRRRMLG 145
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 654 NGISARHSSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
N + +R+ AL KFR KR RC+DKK+RY +RK LAE+RPRVKGQFVR++ D
Sbjct: 523 NEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVD 582
Query: 714 ANA 716
N
Sbjct: 583 LNG 585
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ +LLR C Y V A E L+ + DLV+++V++P +
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHV 132
Query: 161 WR 162
R
Sbjct: 133 VR 134
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +LR C Y V A L+ H D+V+++V +P +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 97 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 161 WRR 163
R+
Sbjct: 153 VRK 155
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ D + +I+ LL++C Y V A E L+ + DLV+++V++P +
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL LV +E D +PVIM+S H V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 77 GFKLLELVGLEMD----LPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHV 132
Query: 161 WR 162
R
Sbjct: 133 VR 134
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + I+ +L C YRV +A L+ + D+V+++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS DS S+VLK + GA D+LIKPVR L+N+WQHV
Sbjct: 88 GFKLLEHVGLEMD----LPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143
Query: 161 WRRHSLLGGHVPQNLHDVY-HKGGAISENNMASSHSSDYAASSQKNKGSEKVSDAQSSR 218
R+ +N +V H GG+I + + + N S + +SSR
Sbjct: 144 VRKK--------RNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSR 194
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+V+ D + +I+ +L+KC Y V A L+ R D+V+++V +P +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 102 GFALLTLV-MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHV 160
GF LL V +E D +PVIMMS+ S V+K + GA D+L+KP+R EL+ +WQHV
Sbjct: 71 GFKLLEHVGLELD----LPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHV 126
Query: 161 WRR 163
R+
Sbjct: 127 LRK 129
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LR+L+V+ D S I+ +L + Y+V A L+ R S DLVL++V +P ++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 102 GFALLTLV--MEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQH 159
G+ LL V +E D +PVIMMS+ + V+ + GA D+LIKP+R EL+N+WQH
Sbjct: 71 GYNLLQQVGLLEMD----LPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 160 VWRRHSLL 167
V RR ++
Sbjct: 127 VVRRKCVM 134
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 19/134 (14%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+R+L+ + DD R+I++ LL+K Y V VP+G AWE + DLVLT+V +P I+
Sbjct: 160 VRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHIT 219
Query: 102 GFALLTLVMEHDVCKNIPVIMMS--------LHDSISMVLKCMLKGAADFLIKPVRRNEL 153
GF LL + +H V ++IPVI+MS +D+I + G DFL KP+ + L
Sbjct: 220 GFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKI-------GGQDFLTKPIAKELL 272
Query: 154 R----NLWQHVWRR 163
+ + Q +W+R
Sbjct: 273 KKKIDTVLQSIWQR 286
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVL V+ + + + + LL +C Y V + A E L+ + DLV+++VE+P
Sbjct: 18 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 77
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
GF LL + +E D +PVIM+S H V+K ++ GA D+L+KPV EL+N+W HV
Sbjct: 78 GFKLLEIGLEMD----LPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 133
Query: 162 RRH 164
+++
Sbjct: 134 KKN 136
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+++ D S ++ LL KC Y+V + A + P +DLV+++ P+
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G +L V IP ++M+ + V+K + GA DFL+KPVR EL N+WQH++
Sbjct: 71 GLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 162 RRH 164
R+
Sbjct: 128 RKQ 130
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+++ D S ++ LL KC Y+V + A + P +DLV+++ P+
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G +L V IP ++M+ + V+K + GA DFL+KPVR EL N+WQH++
Sbjct: 71 GLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 162 RRH 164
R+
Sbjct: 128 RKQ 130
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 662 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
+QR+AAL KFRLKRK+RC++KKVRY SRK LAEQRP VKGQF+R+
Sbjct: 440 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 23 DGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK 82
DG + + E FL + RVLLV AD ++ + L+ + Y+V G A L
Sbjct: 23 DGIASPINDDDEEFLTKSN-RVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLM 79
Query: 83 CRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAAD 142
H IDLV+ + +P I+G L ++ + ++PV++MS V++ + GA D
Sbjct: 80 KNKHEIDLVIWDFHMPDINGLDALNIIGKQ---MDLPVVIMSHEYKKETVMESIKYGACD 136
Query: 143 FLIKPVRRNELRNLWQHVWRR 163
FL+KPV + + LW+HV+R+
Sbjct: 137 FLVKPVSKEVIAVLWRHVYRK 157
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ + +T + ++++ Y+V+ D A L H I++V+ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 104 -ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
AL ++ + D +PV++MS + V+K GA D+++KPV+ + N+WQH+ R
Sbjct: 96 QALKSITSKLD----LPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVR 151
Query: 163 RHSLLGGHV 171
+ + V
Sbjct: 152 KRLIFKPDV 160
>sp|O23100|APRR8_ARATH Putative two-component response regulator-like APRR8 OS=Arabidopsis
thaliana GN=APRR8 PE=2 SV=2
Length = 367
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VLL+++D + +S ++RKCGY+V A + + IDLVL E L ++ +
Sbjct: 16 VLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKY 75
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163
LL + +C+ IPV++ H ++V +C+ +GA L KP+ N+ + LWQ R
Sbjct: 76 ELLEKI--RSICE-IPVVVSGAHVKDAIV-ECLCRGAKLCLEKPLMENDFKILWQFTVSR 131
Query: 164 HSLLGGHV----PQNLHDVYHK---GGAISENN 189
+ P+ H + H G + +NN
Sbjct: 132 QRNFRSQIDINPPEKNHSITHTQSLGAELKKNN 164
>sp|O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Arabidopsis thaliana
GN=ARR4 PE=1 SV=1
Length = 259
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------IDLVLTE 94
++ DDS R +I LLR +V AV G A E L +DL++T+
Sbjct: 36 VLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITD 95
Query: 95 VELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
+P ++G+ LL + E + +PV++MS + ++ + +C+ +GA DFL+KPV+ +++
Sbjct: 96 YCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVK 155
Query: 155 NLWQHVWRRHSLLGGH 170
L H+ + L G+
Sbjct: 156 RLRSHLTKDVKLSNGN 171
>sp|Q9ZWS7|ARR7_ARATH Two-component response regulator ARR7 OS=Arabidopsis thaliana
GN=ARR7 PE=1 SV=1
Length = 206
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETL---------KCRPHSIDLVL 92
L VL V+ R++I LLR +V V G A + L + ++L++
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIV 83
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+ +P +SG+ LL + E + +PV++MS + + + +C+ +GA +FL+KPV+ +
Sbjct: 84 TDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLAD 143
Query: 153 LRNLWQHVWRRHS 165
++ + Q + R +
Sbjct: 144 VKRIKQLIMRNEA 156
>sp|Q9APD9|ZRAR_KLEOX Transcriptional regulatory protein ZraR OS=Klebsiella oxytoca
GN=zraR PE=3 SV=1
Length = 443
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ D S I+ ALLR GYRVA +GL A E K R DLVL ++ + + G
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYRVALANNGLQALE--KVREKVFDLVLCDIRMAEMDGI 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
L + + +IPV++M+ + S+ ++ + GA D+LIKP+ ++L+
Sbjct: 66 ETLKEIKTFN--PSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQ 114
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
LRVL+ + D S I+ L+K Y+V + A TL+ + DL + +V
Sbjct: 42 LRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGD 101
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
F L+ + ++P+I++S DS+ V K M+ GAAD+LIKP+R +LR +++H+
Sbjct: 102 IFRFLSEIGSE---MDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLV 158
Query: 162 RR 163
++
Sbjct: 159 KK 160
>sp|O80366|ARR9_ARATH Two-component response regulator ARR9 OS=Arabidopsis thaliana
GN=ARR9 PE=1 SV=1
Length = 234
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 21/138 (15%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCR-------PHS--------- 87
++ DDS R++I LL+K +V V G A E L R P++
Sbjct: 11 VLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQ 70
Query: 88 ---IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFL 144
++L++T+ +P ++G+ LL V E ++IPV++MS + + + +C+ +GA +F
Sbjct: 71 VVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFF 130
Query: 145 IKPVRRNELRNLWQHVWR 162
+KPVR +L L H+ +
Sbjct: 131 LKPVRLADLNKLKPHMMK 148
>sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3 OS=Arabidopsis thaliana
GN=ARR3 PE=2 SV=1
Length = 231
Score = 63.5 bits (153), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 43 RVLLVEADDS--TRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------IDLV 91
+V ++ DDS R +I LLR +V AV G A E L +DL+
Sbjct: 32 QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLI 91
Query: 92 LTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRN 151
+T+ +P ++G+ LL + E K +PV++MS + ++ + +C+ +GA DFL+KPV+
Sbjct: 92 ITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLA 151
Query: 152 ELRNLWQHVWR 162
+++ L ++ R
Sbjct: 152 DVKRLRSYLTR 162
>sp|Q7G8V2|ARR15_ARATH Two-component response regulator ARR15 OS=Arabidopsis thaliana
GN=ARR15 PE=1 SV=1
Length = 206
Score = 63.5 bits (153), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC---------RPHSIDLVL 92
L VL V+ R++I LL+ +V V G A + L + ++L++
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+ +P ++G+ LL + E + IPV++MS + + +CM++GA +FL+KPV+ +
Sbjct: 78 TDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLAD 137
Query: 153 LRNLWQHVWR 162
++ L + + R
Sbjct: 138 VKRLKELIMR 147
>sp|Q9ZEP4|CSEB_STRCO Transcriptional regulatory protein CseB OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=cseB PE=1 SV=1
Length = 234
Score = 63.5 bits (153), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSISG 102
VL VE DD R+ L + G+ V A+PDGL+ E+ + RP D+ L +V LP + G
Sbjct: 7 VLFVEDDDVIREATQLALERDGFAVTAMPDGLSGLESFRADRP---DIALLDVMLPGLDG 63
Query: 103 FALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
+L + + +PVIM+S DSI +VL + GA D++ KP L + V
Sbjct: 64 VSLCRRIRDE---STVPVIMLSARADSIDVVLG-LEAGADDYVTKPFDGAVLVARIRAVL 119
Query: 162 RRHSLLGG 169
RR GG
Sbjct: 120 RRFGHAGG 127
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPS 99
+ + V++V+ D I+S +L+ YRV AV D A TLK + +IDL++T+ +P
Sbjct: 14 LKINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPG 73
Query: 100 ISGFALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKPVRRNELRNLWQ 158
++G L + + N+PV++MS + L C GA F+ KP+ +L ++Q
Sbjct: 74 MNGLQLKKQITQE--FGNLPVLVMSSDTNKEEESLSC---GAMGFIPKPIHPTDLTKIYQ 128
>sp|Q9ZWS6|ARR6_ARATH Two-component response regulator ARR6 OS=Arabidopsis thaliana
GN=ARR6 PE=1 SV=2
Length = 186
Score = 61.2 bits (147), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS---------IDLVL 92
L VL V+ R+ I LLR +V V A + L ++L++
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 93 TEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNE 152
T+ +P ++G+ LL + E + +PV++MS + + + +C+ +GA DFL+KPV+ ++
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 153 LRNL 156
++ L
Sbjct: 145 VKRL 148
>sp|Q9SB04|ARR5_ARATH Two-component response regulator ARR5 OS=Arabidopsis thaliana
GN=ARR5 PE=1 SV=2
Length = 184
Score = 60.8 bits (146), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 41 VLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHS----------IDL 90
+L VL V+ R+ I LLR +V V A + L + I+L
Sbjct: 24 LLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINL 83
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
++T+ +P ++G+ LL + E + IPV++MS + + + +C+ +GA DFL+KPV+
Sbjct: 84 IMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKL 143
Query: 151 NELRNL 156
+++ L
Sbjct: 144 ADVKRL 149
>sp|P38889|SKN7_YEAST Transcription factor SKN7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SKN7 PE=1 SV=1
Length = 622
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 39 RMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELP 98
R VLLVE D + Q+ S LRK G V V DGL+A TL+ + DLVL ++ +P
Sbjct: 374 RKGFHVLLVEDDAVSIQLCSKFLRKYGCTVQVVSDGLSAISTLE--KYRYDLVLMDIVMP 431
Query: 99 SISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN-LW 157
++ G ++V D P+I M+ + ++ + G D L KP R++L + L
Sbjct: 432 NLDGATATSIVRSFD--NETPIIAMTGNIMNQDLITYLQHGMNDILAKPFTRDDLHSILI 489
Query: 158 QHVWRRHSLLGGHVP 172
+++ R L +P
Sbjct: 490 RYLKDRIPLCEQQLP 504
>sp|O80365|ARR8_ARATH Two-component response regulator ARR8 OS=Arabidopsis thaliana
GN=ARR8 PE=1 SV=1
Length = 225
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 19/136 (13%)
Query: 46 LVEADDST--RQIISALLRKCGYRVAAVPDGLAAWETLKCR-----PHS----------- 87
++ DDS R++I LL+K +V V G A E L R P++
Sbjct: 11 VLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEV 70
Query: 88 -IDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIK 146
I+L++T+ +P ++G+ LL V E ++IPV++MS + + + +C+ +GA +F +K
Sbjct: 71 EINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLK 130
Query: 147 PVRRNELRNLWQHVWR 162
PV+ +L L H+ +
Sbjct: 131 PVKLADLTKLKPHMMK 146
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 31 TRWESFLPRMVLRVLLV------EADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCR 84
++WE+F P+ L+VLL+ + D S+ + L Y V D A +
Sbjct: 9 SKWENF-PKG-LKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKN 66
Query: 85 PHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFL 144
P S + + EV + S + L DV +P IM+S I+ +KC+ GA +FL
Sbjct: 67 PESFHIAIVEVNM-SAESESFKFLEAAKDV---LPTIMISTDHCITTTMKCIALGAVEFL 122
Query: 145 IKPVRRNELRNLWQHV 160
KP+ +L+N+WQHV
Sbjct: 123 QKPLSPEKLKNIWQHV 138
>sp|Q82EB1|CSEB_STRAW Transcriptional regulatory protein CseB OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=cseB PE=3 SV=1
Length = 235
Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKC-RPHSIDLVLTEVELPSISG 102
VL VE DD R+ L + G+ V A+PDGL+ E + RP D+ L +V +P + G
Sbjct: 7 VLFVEDDDVIREATQLALERDGFAVTAMPDGLSGLEAFRANRP---DIALLDVMVPGLDG 63
Query: 103 FALLTLVMEHDVCKNIPVIMMSLH-DSISMVLKCMLKGAADFLIKP 147
+L + + +PVIM+S DSI +VL + GA D++ KP
Sbjct: 64 VSLCRRIRDE---STVPVIMLSARADSIDVVLG-LEAGADDYVTKP 105
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQV-KNETKDANADG 718
S++R+A + ++R KRK+R ++K +RY SRK+ AE RPR+KG+F ++ NE+ D G
Sbjct: 292 SAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHG 350
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 713
S R+A + ++R KRK+R ++K +RY SRK+ AE RPR+KG+F ++ + E D
Sbjct: 282 SMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDD 334
>sp|P14375|ZRAR_ECOLI Transcriptional regulatory protein ZraR OS=Escherichia coli (strain
K12) GN=zraR PE=1 SV=2
Length = 441
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ D S I+ ALLR GY VA G A E + R DLVL +V + + G
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVREQVFDLVLCDVRMAEMDGI 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELR 154
A L + + IPV++M+ + S+ ++ + GA D+LIKP+ + L+
Sbjct: 66 ATLKEI--KALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>sp|Q7MM78|LUXO_VIBVY Regulatory protein LuxO OS=Vibrio vulnificus (strain YJ016) GN=luxO
PE=3 SV=2
Length = 453
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 28/187 (14%)
Query: 46 LVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSI-DLVLTEVELPSISGFA 104
+VE S + + L G + V G A ++LK H I DL+L ++ LP ++G
Sbjct: 1 MVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLK---HRIPDLILLDLRLPDMTGMD 57
Query: 105 LLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRH 164
+L V ++P+I M+ H SI ++ M G+ DFLIKP + LR + R+
Sbjct: 58 VLHAVKASH--PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKA 115
Query: 165 SLLGGHVPQNLHDVYHKGGAISENNMASSHSSDY---AASSQKNKGSEKVSDAQSSRTSS 221
S L +N+ S+ S +Y SSQK + + D+ +S +S
Sbjct: 116 SKL-------------------KNDADSAGSQNYQGFIGSSQKMQQVYRTIDSAASSKAS 156
Query: 222 PYLEAES 228
++ ES
Sbjct: 157 IFITGES 163
>sp|Q8CWJ5|LUXO_VIBVU Regulatory protein LuxO OS=Vibrio vulnificus (strain CMCP6) GN=luxO
PE=3 SV=2
Length = 453
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 28/187 (14%)
Query: 46 LVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSI-DLVLTEVELPSISGFA 104
+VE S + + L G + V G A ++LK H I DL+L ++ LP ++G
Sbjct: 1 MVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLK---HRIPDLILLDLRLPDMTGMD 57
Query: 105 LLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRH 164
+L V ++P+I M+ H SI ++ M G+ DFLIKP + LR + R+
Sbjct: 58 VLHAVKASH--PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKA 115
Query: 165 SLLGGHVPQNLHDVYHKGGAISENNMASSHSSDY---AASSQKNKGSEKVSDAQSSRTSS 221
S L +N+ S+ S +Y SSQK + + D+ +S +S
Sbjct: 116 SKL-------------------KNDADSAGSQNYQGFIGSSQKMQQVYRTIDSAASSKAS 156
Query: 222 PYLEAES 228
++ ES
Sbjct: 157 IFITGES 163
>sp|Q9KM66|CQSS_VIBCH CAI-1 autoinducer sensor kinase/phosphatase CqsS OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=cqsS PE=1 SV=1
Length = 686
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLK-CRPHSIDLVLTEVELPSIS 101
R+L+V+ + S R + LL + GY V DG E LK +IDLVL ++E+P++
Sbjct: 569 RILVVDDNQSIRTFTAILLEQQGYEVVQANDGS---EVLKHMESQNIDLVLMDIEMPNVG 625
Query: 102 GFALLTLVM--EHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
G L+ EH+ KNIP+I + +S + G DF++KP R+ L N
Sbjct: 626 GLEATRLIRNSEHE-YKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVLLN 680
>sp|Q8X613|ZRAR_ECO57 Transcriptional regulatory protein ZraR OS=Escherichia coli O157:H7
GN=zraR PE=3 SV=1
Length = 441
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
+L+V+ D S I+ ALLR GY VA G A E + R DLVL +V + + G
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALE--QVRERVFDLVLCDVRMAEMDGI 65
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
A TL + IPV++M+ + S+ ++ + GA D+LIKP+
Sbjct: 66 A--TLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>sp|Q9KT84|LUXO_VIBCH Regulatory protein LuxO OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=luxO PE=1 SV=1
Length = 455
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 89 DLVLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPV 148
DL+L ++ LP ++G +L V E ++P++ M+ H SI ++ M GA DFLIKP
Sbjct: 42 DLILLDLRLPDMTGMDVLYAVKEK--SPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPC 99
Query: 149 RRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQ 203
+ LR + R+ S L V N + Y S+ A + D AASS+
Sbjct: 100 EADRLRVTVNNAIRKASKLKNDV-DNKNQNYQGFIGSSQTMQAVYRTIDSAASSK 153
>sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana
GN=CIA2 PE=2 SV=1
Length = 435
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 661 SSQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 706
S R+A++ +++ KR+ R + KK+RYQ RK A+QRPR+KG+FVR+
Sbjct: 380 SGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425
>sp|P15940|NODW_BRAJA Nodulation protein W OS=Bradyrhizobium japonicum (strain USDA 110)
GN=nodW PE=3 SV=1
Length = 227
Score = 56.2 bits (134), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCR-PHSIDLVLTEVELPSISG 102
V +VE D S R+ ++ L R G V A +A E L+ P ++ +V LP +SG
Sbjct: 22 VFVVEDDISMRRSLTNLFRSVGLEVVAFG---SAREMLQSTMPDVTSCLVLDVRLPGLSG 78
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNEL 153
T + ++ +IP+I ++ H I M ++ M GA DFL KP R EL
Sbjct: 79 LDYQTELARLNI--HIPIIFITGHGDIPMTVRAMKGGAVDFLSKPFRDQEL 127
>sp|P0CAW8|CTRA_CAUCR Cell cycle transcriptional regulator CtrA OS=Caulobacter crescentus
(strain ATCC 19089 / CB15) GN=ctrA PE=3 SV=1
Length = 231
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSIS 101
+RVLL+E D +T Q I +L+ G+ V G + K + DL+L ++ LP +S
Sbjct: 1 MRVLLIEDDSATAQTIELMLKSEGFNVYTTDLGEEGVDLGKI--YDYDLILLDLNLPDMS 58
Query: 102 GFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVW 161
G +L + + N P++++S I +K GA D++ KP ++E+ V
Sbjct: 59 GIDVLRTLRVAKI--NTPIMILSGSSEIDTKVKTFAGGADDYMTKPFHKDEMIARIHAVV 116
Query: 162 RR 163
RR
Sbjct: 117 RR 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 267,531,841
Number of Sequences: 539616
Number of extensions: 11275604
Number of successful extensions: 26552
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 436
Number of HSP's that attempted gapping in prelim test: 25081
Number of HSP's gapped (non-prelim): 1352
length of query: 720
length of database: 191,569,459
effective HSP length: 125
effective length of query: 595
effective length of database: 124,117,459
effective search space: 73849888105
effective search space used: 73849888105
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)