Query 042956
Match_columns 103
No_of_seqs 132 out of 1017
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 19:52:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042956.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042956hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rkn_A DIR1 protein, AT5G48485 99.9 8E-23 2.7E-27 123.4 2.8 76 28-103 2-77 (77)
2 2ljo_A Non-specific lipid-tran 99.8 2.8E-21 9.6E-26 120.5 0.8 73 28-102 1-81 (93)
3 1afh_A Maize nonspecific lipid 99.7 8.2E-19 2.8E-23 109.3 0.8 73 29-102 2-82 (93)
4 1siy_A LTP 1, NS-LTP1, nonspec 99.7 1.9E-18 6.7E-23 107.2 1.3 72 29-102 1-80 (91)
5 1bwo_A NS-LTP1, nonspecific li 99.7 3.5E-18 1.2E-22 105.9 0.7 71 30-102 2-80 (90)
6 1n89_A Lipid transfer protein; 99.7 8.2E-18 2.8E-22 99.0 1.0 64 35-103 4-67 (67)
7 1t12_A LTP 1, nonspecific lipi 99.7 5.9E-18 2E-22 105.0 -0.3 71 29-102 2-80 (91)
8 1l6h_A LTP2, non-specific lipi 99.6 1.6E-17 5.3E-22 98.3 -0.4 64 35-103 5-68 (69)
9 2alg_A Non-specific lipid tran 99.6 7.1E-17 2.4E-21 100.3 0.4 70 29-102 2-81 (92)
10 1sm7_A Recombinant IB pronapin 96.0 0.0038 1.3E-07 39.1 2.4 67 37-103 14-104 (109)
11 2ds2_B Sweet protein mabinlin- 95.5 0.005 1.7E-07 36.0 1.4 49 55-103 8-67 (72)
12 1pnb_B Napin BNIB; napin IA an 95.3 0.002 7E-08 37.9 -0.8 52 52-103 9-70 (75)
13 1s6d_A Albumin 8; all helix, f 95.3 0.026 8.7E-07 35.0 4.2 72 28-99 8-98 (103)
14 3ob4_A Conglutin, maltose ABC 95.0 0.0053 1.8E-07 46.7 0.5 48 55-103 429-488 (500)
15 2lvf_A 2S albumin; allergen, c 94.7 0.0092 3.1E-07 37.8 1.1 62 37-98 17-101 (114)
16 1w2q_A Conglutin, ARA H 6; all 92.8 0.042 1.4E-06 35.3 1.6 77 27-103 12-117 (127)
17 1hss_A 0.19 alpha-amylase inhi 92.6 0.0091 3.1E-07 38.4 -1.8 64 37-100 16-104 (124)
18 1psy_A 2S albumin, RICC3; albu 92.1 0.033 1.1E-06 35.7 0.4 69 29-97 16-116 (125)
19 1hyp_A Hydrophobic protein fro 91.6 0.12 4E-06 30.7 2.4 61 37-103 10-77 (80)
20 1bea_A Bifunctional amylase/se 89.4 0.23 7.7E-06 31.9 2.5 64 37-100 16-109 (127)
21 1b1u_A Protein (alpha-amylase/ 87.7 0.13 4.6E-06 32.8 0.5 65 37-101 16-109 (122)
22 1spf_A Pulmonary surfactant-as 34.3 42 0.0014 16.2 2.5 10 5-14 11-20 (35)
23 4gyx_A Type III collagen fragm 25.7 16 0.00053 17.0 0.1 12 50-61 20-31 (31)
24 1jb0_F Photosystem 1 reaction 21.4 24 0.00081 23.4 0.4 10 35-44 25-34 (164)
No 1
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.86 E-value=8e-23 Score=123.44 Aligned_cols=76 Identities=43% Similarity=0.907 Sum_probs=67.2
Q ss_pred CCCCccccccccCcHHHhhcCCCCCCChhHHHhhhcCCcccccccccccccccCCCCHHHHhhhhhhcCCCCCCCC
Q 042956 28 DGLCRMTKDGLTACQPAVAASNPSPPSTACCSALSKADLQCFCVFKNSRVLSFYGIDFHQAMQLPAKCNLGDSFHC 103 (103)
Q Consensus 28 ~~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~~~ClC~~l~~~~~~~~~i~~~~a~~Lp~~Cg~~~p~~c 103 (103)
..+|+++..+|.||++|+++++...||++||+++|+.|+.|+|.++++...+.+|||+++|.+||++||+++|++|
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~~C 77 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 77 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCCCC
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhcCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCCCC
Confidence 4679999999999999999743357999999999988999999999975444458999999999999999999998
No 2
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.81 E-value=2.8e-21 Score=120.53 Aligned_cols=73 Identities=25% Similarity=0.477 Sum_probs=64.7
Q ss_pred CCCCccccccccCcHHHhhcCCCCCCChhHHHhhhc--------CCcccccccccccccccCCCCHHHHhhhhhhcCCCC
Q 042956 28 DGLCRMTKDGLTACQPAVAASNPSPPSTACCSALSK--------ADLQCFCVFKNSRVLSFYGIDFHQAMQLPAKCNLGD 99 (103)
Q Consensus 28 ~~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~--------~~~~ClC~~l~~~~~~~~~i~~~~a~~Lp~~Cg~~~ 99 (103)
+.+|+++...|.||++|++|+ ..|++.||+++++ .||+|+|+++++......+||.+||.+||++||+++
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~--~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~ 78 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGG--PGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNI 78 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTS--SCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHhHHHHHcCC--CCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCC
Confidence 368999999999999999985 3699999999997 378999999998776667899999999999999999
Q ss_pred CCC
Q 042956 100 SFH 102 (103)
Q Consensus 100 p~~ 102 (103)
||.
T Consensus 79 p~~ 81 (93)
T 2ljo_A 79 PYK 81 (93)
T ss_dssp SSC
T ss_pred CCC
Confidence 863
No 3
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.71 E-value=8.2e-19 Score=109.26 Aligned_cols=73 Identities=21% Similarity=0.463 Sum_probs=59.9
Q ss_pred CCCccccccccCcHHHhhcCCCCCCChhHHHhhhcC--------CcccccccccccccccCCCCHHHHhhhhhhcCCCCC
Q 042956 29 GLCRMTKDGLTACQPAVAASNPSPPSTACCSALSKA--------DLQCFCVFKNSRVLSFYGIDFHQAMQLPAKCNLGDS 100 (103)
Q Consensus 29 ~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~--------~~~ClC~~l~~~~~~~~~i~~~~a~~Lp~~Cg~~~p 100 (103)
.+|+++...|.||++|+++++ ..|+++||+++++. |++..|.|++.....+.+||.++|.+||++||+++|
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~-~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~~in~~~A~~LP~~C~v~~p 80 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQG-SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIP 80 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSC-CSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHCCCS
T ss_pred CChHHHHHhccCcHHHHcCCC-CCChHHHHHHHHHHHHhhcCCCCCcccCEeeccccccccCcCHHHHHHHHHHcCCCCC
Confidence 579999999999999999865 57999999999973 555666666654444448999999999999999988
Q ss_pred CC
Q 042956 101 FH 102 (103)
Q Consensus 101 ~~ 102 (103)
|.
T Consensus 81 ~~ 82 (93)
T 1afh_A 81 YT 82 (93)
T ss_dssp SC
T ss_pred CC
Confidence 74
No 4
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.70 E-value=1.9e-18 Score=107.17 Aligned_cols=72 Identities=19% Similarity=0.445 Sum_probs=57.8
Q ss_pred CCCccccccccCcHHHhhcCCCCCCChhHHHhhhcC--------CcccccccccccccccCCCCHHHHhhhhhhcCCCCC
Q 042956 29 GLCRMTKDGLTACQPAVAASNPSPPSTACCSALSKA--------DLQCFCVFKNSRVLSFYGIDFHQAMQLPAKCNLGDS 100 (103)
Q Consensus 29 ~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~--------~~~ClC~~l~~~~~~~~~i~~~~a~~Lp~~Cg~~~p 100 (103)
.+|+++...|.||++|+++++ . |+++||+++++. |++..|.|+++....+.+||.++|.+||++||+++|
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~-~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~~in~~~A~~LP~~Cgv~~p 78 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGG-V-VPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIP 78 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCS-C-CCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHTCCCS
T ss_pred CCHHHHHHhccCcHHHHhCCC-C-CcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccCCcCHHHHHHHHHHcCCCCC
Confidence 369999999999999999865 3 999999999983 554555556664443337999999999999999988
Q ss_pred CC
Q 042956 101 FH 102 (103)
Q Consensus 101 ~~ 102 (103)
|.
T Consensus 79 ~~ 80 (91)
T 1siy_A 79 YK 80 (91)
T ss_dssp SC
T ss_pred CC
Confidence 74
No 5
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.68 E-value=3.5e-18 Score=105.86 Aligned_cols=71 Identities=20% Similarity=0.411 Sum_probs=57.0
Q ss_pred CCccccccccCcHHHhhcCCCCCCChhHHHhhhcC--------CcccccccccccccccCCCCHHHHhhhhhhcCCCCCC
Q 042956 30 LCRMTKDGLTACQPAVAASNPSPPSTACCSALSKA--------DLQCFCVFKNSRVLSFYGIDFHQAMQLPAKCNLGDSF 101 (103)
Q Consensus 30 ~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~--------~~~ClC~~l~~~~~~~~~i~~~~a~~Lp~~Cg~~~p~ 101 (103)
+|+++...|.||++|+++++ . |+++||+++++. |++-.|.|+++....+.+||.++|.+||++||+++||
T Consensus 2 ~C~~v~~~L~pCl~y~~~~~-~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p~ 79 (90)
T 1bwo_A 2 DCGHVDSLVRPCLSYVQGGP-G-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPY 79 (90)
T ss_dssp CHHHHHHHHGGGHHHHTTCS-C-CCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCTTCCHHHHHTHHHHHTCCCSS
T ss_pred CHHHHHHhhcccHHHHcCCC-C-CCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccCCcCHHHHHHHHHHcCCCCCC
Confidence 68888899999999999865 3 999999999972 3344555577654443489999999999999999887
Q ss_pred C
Q 042956 102 H 102 (103)
Q Consensus 102 ~ 102 (103)
.
T Consensus 80 ~ 80 (90)
T 1bwo_A 80 T 80 (90)
T ss_dssp C
T ss_pred C
Confidence 4
No 6
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.67 E-value=8.2e-18 Score=99.01 Aligned_cols=64 Identities=27% Similarity=0.592 Sum_probs=55.5
Q ss_pred cccccCcHHHhhcCCCCCCChhHHHhhhcCCcccccccccccccccCCCCHHHHhhhhhhcCCCCCCCC
Q 042956 35 KDGLTACQPAVAASNPSPPSTACCSALSKADLQCFCVFKNSRVLSFYGIDFHQAMQLPAKCNLGDSFHC 103 (103)
Q Consensus 35 ~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~~~ClC~~l~~~~~~~~~i~~~~a~~Lp~~Cg~~~p~~c 103 (103)
..+|.||++|++++ ..||++||++||+. ..|+|+++++.... .+||.++|.+||++||+++| +|
T Consensus 4 ~~~L~pC~~~v~~~--~~Ps~~CC~~lk~~-~~ClC~~~k~~~~~-~~in~~~A~~Lp~~Cgv~~P-~C 67 (67)
T 1n89_A 4 ASQLAVCASAILSG--AKPSGECCGNLRAQ-QGCFCQYAKDPTYG-QYIRSPHARDTLTSCGLAVP-HC 67 (67)
T ss_dssp SSTTHHHHHHHTTC--CCCCHHHHHHHHHH-SSHHHHGGGCSTTH-HHHTCHHHHHHHHHHTSCCS-CC
T ss_pred hhhcccCHHHHcCC--CCCCHHHHHhhCCC-CCCCCccccCcccc-cccCHHHHHHHHHHcCCCCC-CC
Confidence 45799999999975 36999999999985 78999999986553 36999999999999999998 76
No 7
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.66 E-value=5.9e-18 Score=105.02 Aligned_cols=71 Identities=21% Similarity=0.452 Sum_probs=56.4
Q ss_pred CCCccccccccCcHHHhhcCCCCCCChhHHHhhhcC--------CcccccccccccccccCCCCHHHHhhhhhhcCCCCC
Q 042956 29 GLCRMTKDGLTACQPAVAASNPSPPSTACCSALSKA--------DLQCFCVFKNSRVLSFYGIDFHQAMQLPAKCNLGDS 100 (103)
Q Consensus 29 ~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~--------~~~ClC~~l~~~~~~~~~i~~~~a~~Lp~~Cg~~~p 100 (103)
.+|+++...|.||++|+++++ . |+ +||+++++. |++-.|.|+++....+.+||.++|.+||++||+++|
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~-~-P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p 78 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTG-P-LG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIP 78 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSS-C-CT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTCCCS
T ss_pred CChHHHHHhccCcHHHHcCCC-C-hH-HHHHHHHHHHhhccCCCCCCccCCCccccccccCCcChhHHHHHHHHcCCCCC
Confidence 579999999999999999865 4 88 999999972 334455556654333338999999999999999988
Q ss_pred CC
Q 042956 101 FH 102 (103)
Q Consensus 101 ~~ 102 (103)
|.
T Consensus 79 ~~ 80 (91)
T 1t12_A 79 YK 80 (91)
T ss_dssp SC
T ss_pred CC
Confidence 74
No 8
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.63 E-value=1.6e-17 Score=98.32 Aligned_cols=64 Identities=28% Similarity=0.608 Sum_probs=55.4
Q ss_pred cccccCcHHHhhcCCCCCCChhHHHhhhcCCcccccccccccccccCCCCHHHHhhhhhhcCCCCCCCC
Q 042956 35 KDGLTACQPAVAASNPSPPSTACCSALSKADLQCFCVFKNSRVLSFYGIDFHQAMQLPAKCNLGDSFHC 103 (103)
Q Consensus 35 ~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~~~~ClC~~l~~~~~~~~~i~~~~a~~Lp~~Cg~~~p~~c 103 (103)
..+|.||++|++++ ..||++||++||+. ..|+|+++++.... .+||.++|.+||++||+++| +|
T Consensus 5 ~~~L~pC~~~v~~~--~~Ps~~CC~~lk~~-~~ClC~~~k~~~~~-~~in~~~A~~Lp~~Cgv~~P-~C 68 (69)
T 1l6h_A 5 AGQLTVCTGAIAGG--ARPTAACCSSLRAQ-QGCFCQFAKDPRYG-RYVNSPNARKAVSSCGIALP-TC 68 (69)
T ss_dssp TTTHHHHHHHHTTC--CSTTHHHHHHHHHH-HHHHHHHTTCSSHH-HHTTTTTGGGCCCCCSSCSC-CC
T ss_pred hhhcccCHHHHcCC--CCCCHHHHHhhCCC-CCCCCccccCcccc-cccCHHHHHHHHHHcCCCCC-CC
Confidence 45899999999975 36999999999985 88999999986554 36999999999999999987 66
No 9
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.60 E-value=7.1e-17 Score=100.28 Aligned_cols=70 Identities=26% Similarity=0.564 Sum_probs=56.6
Q ss_pred CCCccccccccCcHHHhhcCCCCCCChhHHHhhhcC--------C--cccccccccccccccCCCCHHHHhhhhhhcCCC
Q 042956 29 GLCRMTKDGLTACQPAVAASNPSPPSTACCSALSKA--------D--LQCFCVFKNSRVLSFYGIDFHQAMQLPAKCNLG 98 (103)
Q Consensus 29 ~~C~~~~~~l~~C~~yl~~~~~~~Ps~~CC~~l~~~--------~--~~ClC~~l~~~~~~~~~i~~~~a~~Lp~~Cg~~ 98 (103)
.+|+++...|.||++|+++++ .|+++||+++|+. | ..|+|.... ...+.+||.++|.+||++||++
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~--~~~~~~in~~~A~~LP~~Cgv~ 77 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGG--AVPPACCNGIRNVNNLARTTPDRQAACNCLKQL--SASVPGVNPNNAAALPGKCGVS 77 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCS--CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHH--HHHSTTCCHHHHHHHHHHTTCC
T ss_pred CChHHHHHhccCcHHHHcCCC--CCCHHHHHHHHHHHhhhcccCCCCcCCccccCc--ccccCccChHHHHHHHHHcCCC
Confidence 579998899999999999864 4889999999982 4 468887433 2222389999999999999999
Q ss_pred CCCC
Q 042956 99 DSFH 102 (103)
Q Consensus 99 ~p~~ 102 (103)
+||.
T Consensus 78 ~p~~ 81 (92)
T 2alg_A 78 IPYK 81 (92)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8874
No 10
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=95.99 E-value=0.0038 Score=39.10 Aligned_cols=67 Identities=28% Similarity=0.480 Sum_probs=45.5
Q ss_pred cccCcHHHhhc----CCC-CCC---------ChhHHHhhhcCCccccccccccccccc-----CC-----CCHHHHhhhh
Q 042956 37 GLTACQPAVAA----SNP-SPP---------STACCSALSKADLQCFCVFKNSRVLSF-----YG-----IDFHQAMQLP 92 (103)
Q Consensus 37 ~l~~C~~yl~~----~~~-~~P---------s~~CC~~l~~~~~~ClC~~l~~~~~~~-----~~-----i~~~~a~~Lp 92 (103)
.|.+|..|+.- .+. ..| -..||+.++..+..|-|..|....... ++ -...+|..||
T Consensus 14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~LP 93 (109)
T 1sm7_A 14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLP 93 (109)
T ss_dssp CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTTCHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSSHH
T ss_pred cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhcCccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHhCH
Confidence 38899999962 111 122 257999999999999999998643211 11 1234578899
Q ss_pred hhcCCCCCCCC
Q 042956 93 AKCNLGDSFHC 103 (103)
Q Consensus 93 ~~Cg~~~p~~c 103 (103)
..||+..+-.|
T Consensus 94 ~~Cnl~~~~~C 104 (109)
T 1sm7_A 94 NVCNMKQIGTC 104 (109)
T ss_dssp HHSCCCSSCSS
T ss_pred HhcCCCCCCCC
Confidence 99999855444
No 11
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=95.49 E-value=0.005 Score=35.97 Aligned_cols=49 Identities=27% Similarity=0.545 Sum_probs=36.6
Q ss_pred hhHHHhhhcCCccccccccccccccc------C-----CCCHHHHhhhhhhcCCCCCCCC
Q 042956 55 TACCSALSKADLQCFCVFKNSRVLSF------Y-----GIDFHQAMQLPAKCNLGDSFHC 103 (103)
Q Consensus 55 ~~CC~~l~~~~~~ClC~~l~~~~~~~------~-----~i~~~~a~~Lp~~Cg~~~p~~c 103 (103)
..||+.|+..++.|.|..|....... . .=...+|..||..||+..|-.|
T Consensus 8 qqCC~eL~~~~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~~~C 67 (72)
T 2ds2_B 8 RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGAC 67 (72)
T ss_dssp HHHHHHHTTSCGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTCCCC
T ss_pred HHHHHHHHhcCccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCCCcC
Confidence 57999999999999999998754110 0 1225678999999999755444
No 12
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=95.27 E-value=0.002 Score=37.87 Aligned_cols=52 Identities=27% Similarity=0.464 Sum_probs=38.4
Q ss_pred CCChhHHHhhhcCCcccccccccccccc-----cCC-----CCHHHHhhhhhhcCCCCCCCC
Q 042956 52 PPSTACCSALSKADLQCFCVFKNSRVLS-----FYG-----IDFHQAMQLPAKCNLGDSFHC 103 (103)
Q Consensus 52 ~Ps~~CC~~l~~~~~~ClC~~l~~~~~~-----~~~-----i~~~~a~~Lp~~Cg~~~p~~c 103 (103)
..-..||+.|+..+..|-|..|...... .++ -...+|..||..||+..+-.|
T Consensus 9 ~~~qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~~~C 70 (75)
T 1pnb_B 9 WLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTC 70 (75)
T ss_dssp SCTHHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTTCCC
T ss_pred HHHHHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCCCCC
Confidence 4567899999999999999999875311 111 125678889999999866554
No 13
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=95.26 E-value=0.026 Score=35.05 Aligned_cols=72 Identities=21% Similarity=0.329 Sum_probs=50.1
Q ss_pred CCCCcccc--cc-ccCcHHHhhcC---C-C-------CCCChhHHHhhhcCCcccccccccccccccC-CC----CHHHH
Q 042956 28 DGLCRMTK--DG-LTACQPAVAAS---N-P-------SPPSTACCSALSKADLQCFCVFKNSRVLSFY-GI----DFHQA 88 (103)
Q Consensus 28 ~~~C~~~~--~~-l~~C~~yl~~~---~-~-------~~Ps~~CC~~l~~~~~~ClC~~l~~~~~~~~-~i----~~~~a 88 (103)
...|...+ .. |.+|..|+.-. . + ...-..||+.++..+..|-|..|.......+ |- ...+|
T Consensus 8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~~CrC~al~~~~Q~q~~g~q~~~~~q~A 87 (103)
T 1s6d_A 8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMA 87 (103)
T ss_dssp SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHTTSTTCSSTHHHHHHHH
T ss_pred CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCcccCcHHHHHHHHHHhcchhHHHHHHHH
Confidence 44576654 24 88999999631 0 1 1235789999999999999999976542222 11 24578
Q ss_pred hhhhhhcCCCC
Q 042956 89 MQLPAKCNLGD 99 (103)
Q Consensus 89 ~~Lp~~Cg~~~ 99 (103)
..||..||++.
T Consensus 88 ~~LP~~C~i~p 98 (103)
T 1s6d_A 88 HNLPIECNLMS 98 (103)
T ss_dssp HHHHHHTTSSS
T ss_pred HhcHHhcCCCc
Confidence 89999999974
No 14
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=94.96 E-value=0.0053 Score=46.73 Aligned_cols=48 Identities=21% Similarity=0.527 Sum_probs=36.4
Q ss_pred hhHHHhhhcCC--cccccccccccccccC----------CCCHHHHhhhhhhcCCCCCCCC
Q 042956 55 TACCSALSKAD--LQCFCVFKNSRVLSFY----------GIDFHQAMQLPAKCNLGDSFHC 103 (103)
Q Consensus 55 ~~CC~~l~~~~--~~ClC~~l~~~~~~~~----------~i~~~~a~~Lp~~Cg~~~p~~c 103 (103)
.+||+.|+..+ ++|-|+.|........ .+ ..+|..||..||+..|-.|
T Consensus 429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~~~~c 488 (500)
T 3ob4_A 429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRAPQRC 488 (500)
T ss_dssp HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCCCSCC
T ss_pred HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCCCccC
Confidence 68999999976 8999999987433211 11 3559999999999977555
No 15
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=94.74 E-value=0.0092 Score=37.75 Aligned_cols=62 Identities=24% Similarity=0.455 Sum_probs=43.2
Q ss_pred cccCcHHHhhc----CCC-CCCC-------hhHHHhhhcCCccccccccccccccc----CCCC-------HHHHhhhhh
Q 042956 37 GLTACQPAVAA----SNP-SPPS-------TACCSALSKADLQCFCVFKNSRVLSF----YGID-------FHQAMQLPA 93 (103)
Q Consensus 37 ~l~~C~~yl~~----~~~-~~Ps-------~~CC~~l~~~~~~ClC~~l~~~~~~~----~~i~-------~~~a~~Lp~ 93 (103)
.|..|..|+.- .+. ..+. ..||+.|+..+..|-|..|+..+... ..+- ..+|..||.
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~LP~ 96 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPS 96 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhChH
Confidence 58889999852 111 1111 34999999999999999998643321 1111 467999999
Q ss_pred hcCCC
Q 042956 94 KCNLG 98 (103)
Q Consensus 94 ~Cg~~ 98 (103)
.||+.
T Consensus 97 ~C~i~ 101 (114)
T 2lvf_A 97 RCNLS 101 (114)
T ss_dssp HHCCC
T ss_pred hcCCC
Confidence 99997
No 16
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=92.83 E-value=0.042 Score=35.35 Aligned_cols=77 Identities=19% Similarity=0.437 Sum_probs=50.8
Q ss_pred CCCCCcccc--ccccCcHHHhhcC---C---C-C--CC-------ChhHHHhhhcC--Cccccccccccccccc---C-C
Q 042956 27 GDGLCRMTK--DGLTACQPAVAAS---N---P-S--PP-------STACCSALSKA--DLQCFCVFKNSRVLSF---Y-G 82 (103)
Q Consensus 27 ~~~~C~~~~--~~l~~C~~yl~~~---~---~-~--~P-------s~~CC~~l~~~--~~~ClC~~l~~~~~~~---~-~ 82 (103)
....|...+ ..|.+|..|+.-. . + . .. -..||+.|+.. ++.|.|..|+..+... + +
T Consensus 12 ~~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~g 91 (127)
T 1w2q_A 12 DSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQD 91 (127)
T ss_dssp TTCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTTT
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhhhhh
Confidence 345676654 4589999999631 1 0 0 11 25799999998 9999999998755111 1 1
Q ss_pred --CC---HHHHhhhhhhcCCCCCCCC
Q 042956 83 --ID---FHQAMQLPAKCNLGDSFHC 103 (103)
Q Consensus 83 --i~---~~~a~~Lp~~Cg~~~p~~c 103 (103)
.. ..+|..||..|++.-|-.|
T Consensus 92 qq~~~~~~q~A~~LP~~C~i~~~~~C 117 (127)
T 1w2q_A 92 RQMVQQFKRELMSLPQQCNFRAPQRC 117 (127)
T ss_dssp STTHHHHHHHHHHHHHHHTCCCSSCC
T ss_pred HHHHHHHHHHHHHhHHhcCCCCCCcC
Confidence 22 4578999999999544333
No 17
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=92.60 E-value=0.0091 Score=38.40 Aligned_cols=64 Identities=27% Similarity=0.422 Sum_probs=43.6
Q ss_pred cccCcHHHhhcC--CCCCC---ChhHHHhhhcCCccccccccccccccc---CC-----------------CCHHHHhhh
Q 042956 37 GLTACQPAVAAS--NPSPP---STACCSALSKADLQCFCVFKNSRVLSF---YG-----------------IDFHQAMQL 91 (103)
Q Consensus 37 ~l~~C~~yl~~~--~~~~P---s~~CC~~l~~~~~~ClC~~l~~~~~~~---~~-----------------i~~~~a~~L 91 (103)
.|..|..|+... ++..| ...||+.|+..+..|-|..|....... .+ .-...|..|
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A~~L 95 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTAASI 95 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHHTTH
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHHHhc
Confidence 477899999521 11223 357999999999999999887643210 11 112368899
Q ss_pred hhhcCCCCC
Q 042956 92 PAKCNLGDS 100 (103)
Q Consensus 92 p~~Cg~~~p 100 (103)
|..||+.++
T Consensus 96 P~~Cnl~~~ 104 (124)
T 1hss_A 96 TAVCRLPIV 104 (124)
T ss_dssp HHHTTCCEE
T ss_pred hhhcCCCCC
Confidence 999999865
No 18
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=92.09 E-value=0.033 Score=35.70 Aligned_cols=69 Identities=19% Similarity=0.397 Sum_probs=47.7
Q ss_pred CCCcccc--ccccCcHHHhhcC---C--C----CCC-----------ChhHHHhhhcCCcccccccccccccc-----cC
Q 042956 29 GLCRMTK--DGLTACQPAVAAS---N--P----SPP-----------STACCSALSKADLQCFCVFKNSRVLS-----FY 81 (103)
Q Consensus 29 ~~C~~~~--~~l~~C~~yl~~~---~--~----~~P-----------s~~CC~~l~~~~~~ClC~~l~~~~~~-----~~ 81 (103)
..|...+ ..|.+|..|+.-. . + ..| -..||+.|+..++.|.|..|+..+.. ..
T Consensus 16 q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~~C~C~aL~~~v~~~~qQgq~ 95 (125)
T 1psy_A 16 QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQL 95 (125)
T ss_dssp SSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhh
Confidence 4587655 4689999999641 0 0 012 25799999999999999999764411 00
Q ss_pred -C--C--CHHHHhhhhhhcCC
Q 042956 82 -G--I--DFHQAMQLPAKCNL 97 (103)
Q Consensus 82 -~--i--~~~~a~~Lp~~Cg~ 97 (103)
+ + -..+|..||..||+
T Consensus 96 ~gqq~~~~~q~A~~LP~~C~i 116 (125)
T 1psy_A 96 HGEESERVAQRAGEIVSSCGV 116 (125)
T ss_dssp CTTCSHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHhhHHHcCC
Confidence 1 1 14678899999998
No 19
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=91.65 E-value=0.12 Score=30.71 Aligned_cols=61 Identities=18% Similarity=0.548 Sum_probs=42.2
Q ss_pred cccCcHHHhhcCCCCCCChhHHHhhhc----CCcccccccccccccccCCCCHHHHhh-hhhhcCCCCC--CCC
Q 042956 37 GLTACQPAVAASNPSPPSTACCSALSK----ADLQCFCVFKNSRVLSFYGIDFHQAMQ-LPAKCNLGDS--FHC 103 (103)
Q Consensus 37 ~l~~C~~yl~~~~~~~Ps~~CC~~l~~----~~~~ClC~~l~~~~~~~~~i~~~~a~~-Lp~~Cg~~~p--~~c 103 (103)
+|--|.+-+.|. ..|...||+-++. .-..|+|..++ ...+ +|.+-..+ |-..||..+| |.|
T Consensus 10 kLgvCanvL~g~--~~~~~~CC~Ll~GL~dleAAvCLCtaik--~Lgi--lnlpv~L~llln~Cgk~~P~gF~C 77 (80)
T 1hyp_A 10 DLSICLNILGGS--LGTVDDCCALIGGLGDIEAIVCLCIQLR--ALGI--LNLNRNLQLILNSCGRSYPSNATC 77 (80)
T ss_dssp CCGGGGGGGGTC--CTTHHHHHHHHHTSCHHHHHHHHHHHHH--HHTC--SCHHHHHHHHHHHTTCSSCCCCCC
T ss_pred chhHHHHHhCcC--CCCCCccchhhhCcchhhhhhhhhhhcc--ccce--eecChhHHHHHHHhCCcCcCCCCC
Confidence 577888888643 2367789999997 24469999888 2222 46665655 4578999875 554
No 20
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=89.44 E-value=0.23 Score=31.93 Aligned_cols=64 Identities=25% Similarity=0.356 Sum_probs=43.9
Q ss_pred cccCcHHHhhc----CCCCCC----ChhHHHhhhcCCccccccccccccccc------------CCCC--------HHHH
Q 042956 37 GLTACQPAVAA----SNPSPP----STACCSALSKADLQCFCVFKNSRVLSF------------YGID--------FHQA 88 (103)
Q Consensus 37 ~l~~C~~yl~~----~~~~~P----s~~CC~~l~~~~~~ClC~~l~~~~~~~------------~~i~--------~~~a 88 (103)
.|..|..|+.. .++..| ...||+.++..+..|-|..|....... ++.- ...|
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~~~A 95 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFA 95 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSCGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhcCcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHHHHH
Confidence 47789999952 222233 235999999999999999887532110 1111 3468
Q ss_pred hhh--hhhcCCCCC
Q 042956 89 MQL--PAKCNLGDS 100 (103)
Q Consensus 89 ~~L--p~~Cg~~~p 100 (103)
..| |..||+..+
T Consensus 96 ~~Lv~P~~Cnl~~~ 109 (127)
T 1bea_A 96 ATLVTEAECNLATI 109 (127)
T ss_dssp TTTTSTTTTCCCCT
T ss_pred HhcCCcccCCCCCC
Confidence 899 999999876
No 21
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=87.70 E-value=0.13 Score=32.78 Aligned_cols=65 Identities=22% Similarity=0.301 Sum_probs=44.2
Q ss_pred cccCcHHHhhc----CCCCCC----ChhHHHhhhcCCccccccccccccccc-----------CCCC--------HHHHh
Q 042956 37 GLTACQPAVAA----SNPSPP----STACCSALSKADLQCFCVFKNSRVLSF-----------YGID--------FHQAM 89 (103)
Q Consensus 37 ~l~~C~~yl~~----~~~~~P----s~~CC~~l~~~~~~ClC~~l~~~~~~~-----------~~i~--------~~~a~ 89 (103)
.|..|..|+.. .++..| ...||+.++..+..|-|..|....... ++.- ...|.
T Consensus 16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~~A~ 95 (122)
T 1b1u_A 16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAP 95 (122)
T ss_dssp TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHHHGG
T ss_pred cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHHHHH
Confidence 47789999953 222234 246999999999999999887633110 0111 23588
Q ss_pred hh--hhhcCCCCCC
Q 042956 90 QL--PAKCNLGDSF 101 (103)
Q Consensus 90 ~L--p~~Cg~~~p~ 101 (103)
.| |..||+.++.
T Consensus 96 ~Lv~P~~Cnl~~~~ 109 (122)
T 1b1u_A 96 KLVTEVECNLATIH 109 (122)
T ss_dssp GTTSTTTTCCCCTT
T ss_pred hcCCcccCCCCCCC
Confidence 89 9999998763
No 22
>1spf_A Pulmonary surfactant-associated polypeptide C; lipoprotein(surface FILM); NMR {Sus scrofa} SCOP: j.35.1.1
Probab=34.26 E-value=42 Score=16.23 Aligned_cols=10 Identities=30% Similarity=0.743 Sum_probs=4.4
Q ss_pred hHHHHHHHHH
Q 042956 5 VKLLILAVIL 14 (103)
Q Consensus 5 ~~~~~~~~v~ 14 (103)
|++..+++++
T Consensus 11 KrLlivVvVv 20 (35)
T 1spf_A 11 KRLLVVVVVV 20 (35)
T ss_dssp HHHHHHHHHH
T ss_pred heEEEEEeee
Confidence 5544444333
No 23
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=25.67 E-value=16 Score=17.05 Aligned_cols=12 Identities=33% Similarity=1.090 Sum_probs=6.0
Q ss_pred CCCCChhHHHhh
Q 042956 50 PSPPSTACCSAL 61 (103)
Q Consensus 50 ~~~Ps~~CC~~l 61 (103)
+.-|+..||.++
T Consensus 20 ppgppgpccggv 31 (31)
T 4gyx_A 20 PPGPPGPCCGGV 31 (31)
T ss_dssp CCCCCCCCC---
T ss_pred CCCCCCCCccCC
Confidence 345667798764
No 24
>1jb0_F Photosystem 1 reaction centre subunit III; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.16.1 PDB: 3pcq_F*
Probab=21.37 E-value=24 Score=23.41 Aligned_cols=10 Identities=30% Similarity=0.743 Sum_probs=7.3
Q ss_pred cccccCcHHH
Q 042956 35 KDGLTACQPA 44 (103)
Q Consensus 35 ~~~l~~C~~y 44 (103)
...|.||.+.
T Consensus 25 ~agLtpC~es 34 (164)
T 1jb0_F 25 VAGLVPCKDS 34 (164)
T ss_dssp GGGCEEGGGC
T ss_pred hcCCccCcCC
Confidence 5678888764
Done!