Query 042957
Match_columns 371
No_of_seqs 167 out of 2112
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 19:53:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 2.6E-47 8.9E-52 350.2 34.6 271 35-367 36-307 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 3.3E-47 1.1E-51 348.3 34.1 269 36-368 28-298 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 5.1E-47 1.7E-51 347.7 34.7 271 37-369 23-294 (306)
4 2vpj_A Kelch-like protein 12; 100.0 2.1E-46 7.3E-51 342.7 34.9 268 35-368 28-299 (301)
5 4asc_A Kelch repeat and BTB do 100.0 1.2E-44 4.3E-49 333.3 31.5 269 38-353 13-287 (315)
6 2woz_A Kelch repeat and BTB do 100.0 1E-43 3.6E-48 327.6 28.6 275 39-367 25-305 (318)
7 2uvk_A YJHT; unknown function, 100.0 2.4E-41 8.4E-46 316.6 30.2 267 38-354 31-353 (357)
8 4asc_A Kelch repeat and BTB do 100.0 1.9E-40 6.6E-45 305.3 26.7 252 17-322 46-307 (315)
9 1zgk_A Kelch-like ECH-associat 100.0 5E-40 1.7E-44 301.6 27.3 246 63-367 13-260 (308)
10 2xn4_A Kelch-like protein 2; s 100.0 2.7E-39 9.2E-44 295.8 29.7 227 35-315 74-302 (302)
11 2uvk_A YJHT; unknown function, 100.0 3.9E-39 1.3E-43 301.6 29.0 265 52-367 2-314 (357)
12 3ii7_A Kelch-like protein 7; p 100.0 2.4E-38 8.3E-43 289.9 30.0 231 74-368 11-246 (306)
13 2woz_A Kelch repeat and BTB do 100.0 6.3E-39 2.2E-43 295.6 25.8 230 35-319 75-314 (318)
14 2vpj_A Kelch-like protein 12; 100.0 5E-38 1.7E-42 287.1 29.6 236 72-367 12-251 (301)
15 2zwa_A Leucine carboxyl methyl 100.0 2.3E-35 7.8E-40 298.4 27.6 264 35-341 409-694 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 1.5E-33 5E-38 285.2 26.4 233 63-353 387-644 (695)
17 1k3i_A Galactose oxidase precu 100.0 3.2E-34 1.1E-38 289.2 20.3 276 37-370 218-520 (656)
18 1k3i_A Galactose oxidase precu 100.0 8.1E-31 2.8E-35 264.4 17.0 274 39-367 167-463 (656)
19 3dsm_A Uncharacterized protein 98.5 9.4E-05 3.2E-09 67.3 24.6 189 38-276 17-218 (328)
20 3dsm_A Uncharacterized protein 98.4 0.00012 4.1E-09 66.6 24.7 239 38-353 64-314 (328)
21 3mbr_X Glutamine cyclotransfer 98.3 0.00018 6.2E-09 62.1 20.6 159 68-276 24-185 (243)
22 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0048 1.7E-07 56.6 27.2 221 38-349 63-304 (376)
23 3nol_A Glutamine cyclotransfer 98.1 0.00035 1.2E-08 60.9 17.9 159 68-276 46-207 (262)
24 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.0039 1.3E-07 57.3 25.6 212 38-348 113-344 (376)
25 3mbr_X Glutamine cyclotransfer 97.9 0.0021 7.3E-08 55.4 19.5 116 131-274 22-137 (243)
26 3nok_A Glutaminyl cyclase; bet 97.9 0.00089 3.1E-08 58.4 17.2 156 68-276 58-216 (268)
27 1l0q_A Surface layer protein; 97.7 0.0011 3.7E-08 61.1 16.5 176 38-276 12-195 (391)
28 2iwa_A Glutamine cyclotransfer 97.7 0.0088 3E-07 52.4 21.2 158 68-275 24-186 (266)
29 3jrp_A Fusion protein of prote 97.6 0.0035 1.2E-07 56.9 18.2 179 39-272 34-242 (379)
30 3nol_A Glutamine cyclotransfer 97.6 0.0042 1.4E-07 54.1 17.3 114 133-274 46-159 (262)
31 1l0q_A Surface layer protein; 97.5 0.0014 4.7E-08 60.4 14.0 136 108-276 12-153 (391)
32 1gxr_A ESG1, transducin-like e 97.5 0.0096 3.3E-07 52.9 19.1 139 108-276 119-261 (337)
33 3vgz_A Uncharacterized protein 97.5 0.03 1E-06 50.1 22.3 183 38-276 69-268 (353)
34 4ery_A WD repeat-containing pr 97.5 0.018 6.2E-07 51.0 20.2 176 39-273 46-226 (312)
35 1q7f_A NHL, brain tumor CG1071 97.5 0.047 1.6E-06 47.6 22.8 189 38-276 51-244 (286)
36 1k8k_C P40, ARP2/3 complex 41 97.4 0.0096 3.3E-07 53.9 17.8 182 38-272 30-235 (372)
37 3bws_A Protein LP49; two-domai 97.4 0.0028 9.6E-08 59.1 14.0 184 39-276 102-298 (433)
38 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.033 1.1E-06 52.2 21.3 138 108-275 259-396 (445)
39 1rwi_B Serine/threonine-protei 97.3 0.045 1.6E-06 47.1 20.7 177 38-274 46-226 (270)
40 2hqs_A Protein TOLB; TOLB, PAL 97.3 0.03 1E-06 52.3 20.4 190 108-351 203-395 (415)
41 3jrp_A Fusion protein of prote 97.3 0.0085 2.9E-07 54.3 15.8 143 108-276 33-199 (379)
42 3nok_A Glutaminyl cyclase; bet 97.3 0.024 8.2E-07 49.4 17.4 112 133-275 58-169 (268)
43 3ow8_A WD repeat-containing pr 97.2 0.051 1.7E-06 48.7 20.3 137 108-274 102-241 (321)
44 2iwa_A Glutamine cyclotransfer 97.2 0.04 1.4E-06 48.2 18.7 113 133-273 24-138 (266)
45 1gxr_A ESG1, transducin-like e 97.2 0.021 7.1E-07 50.7 17.4 178 38-274 119-300 (337)
46 2z2n_A Virginiamycin B lyase; 97.2 0.084 2.9E-06 45.9 20.9 179 38-276 36-218 (299)
47 4g56_B MGC81050 protein; prote 97.2 0.013 4.3E-07 53.6 15.9 175 108-342 161-344 (357)
48 1p22_A F-BOX/WD-repeat protein 97.2 0.0079 2.7E-07 56.4 14.6 150 70-272 138-287 (435)
49 1p22_A F-BOX/WD-repeat protein 97.1 0.029 1E-06 52.4 18.5 213 38-342 153-366 (435)
50 3bws_A Protein LP49; two-domai 97.1 0.019 6.4E-07 53.4 17.1 188 39-274 145-338 (433)
51 3vl1_A 26S proteasome regulato 97.1 0.05 1.7E-06 50.2 19.9 136 108-272 119-280 (420)
52 4gqb_B Methylosome protein 50; 97.1 0.037 1.3E-06 50.3 18.5 185 39-276 104-295 (344)
53 2z2n_A Virginiamycin B lyase; 97.1 0.11 3.8E-06 45.1 21.1 177 39-276 79-260 (299)
54 4aez_A CDC20, WD repeat-contai 97.1 0.039 1.3E-06 50.9 18.7 179 38-275 113-298 (401)
55 3vgz_A Uncharacterized protein 97.1 0.14 4.8E-06 45.6 22.7 138 108-276 164-309 (353)
56 2pm7_B Protein transport prote 97.1 0.074 2.5E-06 46.9 19.7 96 38-168 31-133 (297)
57 3fvz_A Peptidyl-glycine alpha- 97.1 0.15 5.2E-06 45.6 24.6 190 38-276 69-283 (329)
58 3v9f_A Two-component system se 97.1 0.09 3.1E-06 53.4 22.5 221 40-349 385-617 (781)
59 3odt_A Protein DOA1; ubiquitin 97.0 0.1 3.5E-06 45.5 20.2 153 139-353 154-306 (313)
60 2ovr_B FBW7, F-BOX/WD repeat p 97.0 0.089 3E-06 49.2 20.8 174 108-342 219-392 (445)
61 3hfq_A Uncharacterized protein 97.0 0.038 1.3E-06 49.7 17.6 187 38-276 18-226 (347)
62 1k8k_C P40, ARP2/3 complex 41 96.9 0.044 1.5E-06 49.4 17.1 136 108-269 30-172 (372)
63 2qc5_A Streptogramin B lactona 96.9 0.17 5.9E-06 43.9 20.5 177 38-276 83-265 (300)
64 1rwi_B Serine/threonine-protei 96.9 0.15 5.1E-06 43.7 19.7 137 108-275 46-185 (270)
65 1nir_A Nitrite reductase; hemo 96.9 0.097 3.3E-06 50.8 20.2 111 214-354 302-418 (543)
66 4aez_A CDC20, WD repeat-contai 96.9 0.071 2.4E-06 49.2 18.5 149 139-342 228-381 (401)
67 2qc5_A Streptogramin B lactona 96.9 0.18 6.2E-06 43.7 20.4 178 38-276 41-223 (300)
68 1got_B GT-beta; complex (GTP-b 96.9 0.1 3.5E-06 46.9 19.1 138 108-272 164-303 (340)
69 2ojh_A Uncharacterized protein 96.8 0.18 6E-06 43.3 19.7 237 37-351 21-266 (297)
70 1r5m_A SIR4-interacting protei 96.8 0.2 7E-06 45.7 21.1 136 108-273 171-322 (425)
71 3jro_A Fusion protein of prote 96.8 0.031 1E-06 56.7 16.0 236 39-354 32-297 (753)
72 3v9f_A Two-component system se 96.8 0.32 1.1E-05 49.2 23.6 180 40-276 335-530 (781)
73 1q7f_A NHL, brain tumor CG1071 96.8 0.24 8.2E-06 43.0 20.6 142 108-276 51-200 (286)
74 3v7d_B Cell division control p 96.8 0.37 1.2E-05 45.0 22.9 145 138-342 278-422 (464)
75 3vl1_A 26S proteasome regulato 96.7 0.21 7.1E-06 45.9 20.2 176 38-272 119-324 (420)
76 3ow8_A WD repeat-containing pr 96.7 0.15 5E-06 45.6 18.5 135 108-272 144-281 (321)
77 3u4y_A Uncharacterized protein 96.7 0.048 1.6E-06 48.5 15.2 139 109-276 109-258 (331)
78 3mkq_A Coatomer beta'-subunit; 96.7 0.081 2.8E-06 53.5 18.5 178 38-272 35-219 (814)
79 3u4y_A Uncharacterized protein 96.7 0.1 3.4E-06 46.3 17.1 179 38-273 20-210 (331)
80 2vdu_B TRNA (guanine-N(7)-)-me 96.7 0.33 1.1E-05 45.4 21.4 96 108-227 171-275 (450)
81 3v7d_B Cell division control p 96.7 0.43 1.5E-05 44.5 23.9 137 108-275 290-426 (464)
82 3scy_A Hypothetical bacterial 96.6 0.12 4.2E-06 46.6 17.7 99 38-168 29-130 (361)
83 4ery_A WD repeat-containing pr 96.6 0.12 4E-06 45.6 17.2 137 108-273 45-183 (312)
84 1ri6_A Putative isomerase YBHE 96.6 0.05 1.7E-06 48.3 14.7 112 139-276 140-270 (343)
85 3f3f_A Nucleoporin SEH1; struc 96.6 0.28 9.7E-06 43.1 19.7 32 312-353 317-348 (351)
86 3jro_A Fusion protein of prote 96.6 0.024 8.3E-07 57.4 13.9 138 108-271 31-190 (753)
87 4a2l_A BT_4663, two-component 96.6 0.71 2.4E-05 46.8 24.6 137 109-276 108-250 (795)
88 2aq5_A Coronin-1A; WD40 repeat 96.6 0.23 8E-06 45.5 19.4 109 141-272 145-256 (402)
89 1vyh_C Platelet-activating fac 96.5 0.26 9E-06 45.6 19.6 136 38-226 130-268 (410)
90 3fm0_A Protein CIAO1; WDR39,SG 96.5 0.043 1.5E-06 49.6 13.9 143 108-276 38-187 (345)
91 2pbi_B Guanine nucleotide-bind 96.5 0.43 1.5E-05 43.1 20.6 137 108-272 176-317 (354)
92 4a2l_A BT_4663, two-component 96.5 0.39 1.3E-05 48.8 22.2 222 40-349 379-620 (795)
93 1sq9_A Antiviral protein SKI8; 96.4 0.18 6.3E-06 45.8 17.8 58 214-272 207-269 (397)
94 3dwl_C Actin-related protein 2 96.4 0.018 6.3E-07 52.4 10.7 139 108-272 33-179 (377)
95 4g56_B MGC81050 protein; prote 96.4 0.069 2.4E-06 48.6 14.6 107 139-272 150-260 (357)
96 3azo_A Aminopeptidase; POP fam 96.4 0.4 1.4E-05 47.2 21.2 154 107-276 160-331 (662)
97 1r5m_A SIR4-interacting protei 96.4 0.11 3.7E-06 47.5 16.1 134 108-272 227-363 (425)
98 2ynn_A Coatomer subunit beta'; 96.4 0.3 1E-05 43.0 18.4 135 108-272 77-219 (304)
99 1pjx_A Dfpase, DIISOPROPYLFLUO 96.4 0.17 5.9E-06 44.4 16.8 186 38-272 46-258 (314)
100 3bg1_A Protein SEC13 homolog; 96.4 0.05 1.7E-06 48.5 13.2 108 214-354 189-305 (316)
101 3dwl_C Actin-related protein 2 96.3 0.035 1.2E-06 50.5 12.0 138 38-224 33-178 (377)
102 4gqb_B Methylosome protein 50; 96.3 0.068 2.3E-06 48.5 13.8 137 108-272 103-248 (344)
103 2pm7_B Protein transport prote 96.2 0.25 8.6E-06 43.3 16.8 63 140-224 67-133 (297)
104 2pm9_A Protein WEB1, protein t 96.2 0.24 8.2E-06 45.3 17.3 109 140-272 178-296 (416)
105 2hes_X YDR267CP; beta-propelle 96.2 0.26 9E-06 44.0 17.0 106 139-270 118-230 (330)
106 2hes_X YDR267CP; beta-propelle 96.2 0.21 7.2E-06 44.6 16.2 112 139-276 164-286 (330)
107 1vyh_C Platelet-activating fac 96.2 0.32 1.1E-05 44.9 18.0 137 108-274 130-269 (410)
108 2aq5_A Coronin-1A; WD40 repeat 96.2 0.28 9.7E-06 44.9 17.5 145 108-276 154-307 (402)
109 3zwl_B Eukaryotic translation 96.1 0.14 4.9E-06 45.7 15.0 139 108-270 54-206 (369)
110 3ei3_B DNA damage-binding prot 96.1 0.37 1.3E-05 43.7 17.8 134 108-270 96-236 (383)
111 1sq9_A Antiviral protein SKI8; 96.1 0.5 1.7E-05 42.8 18.5 107 141-274 82-220 (397)
112 3fm0_A Protein CIAO1; WDR39,SG 96.0 0.18 6.2E-06 45.4 15.2 179 38-268 38-223 (345)
113 3no2_A Uncharacterized protein 96.0 0.54 1.8E-05 41.0 17.6 179 108-349 15-203 (276)
114 3k26_A Polycomb protein EED; W 96.0 0.18 6.3E-06 44.9 14.9 94 108-225 95-194 (366)
115 4aow_A Guanine nucleotide-bind 96.0 0.69 2.4E-05 40.7 18.6 104 140-273 185-289 (340)
116 2pm9_A Protein WEB1, protein t 95.9 0.56 1.9E-05 42.7 18.2 109 140-271 126-250 (416)
117 1ri6_A Putative isomerase YBHE 95.9 0.44 1.5E-05 42.0 16.8 142 108-275 60-216 (343)
118 2ad6_A Methanol dehydrogenase 95.9 1.4 5E-05 42.8 23.7 120 69-229 57-193 (571)
119 2z3z_A Dipeptidyl aminopeptida 95.9 0.76 2.6E-05 45.6 20.1 152 107-276 234-397 (706)
120 2hqs_A Protein TOLB; TOLB, PAL 95.9 0.38 1.3E-05 44.7 16.9 187 38-276 203-393 (415)
121 3no2_A Uncharacterized protein 95.8 0.59 2E-05 40.8 17.1 175 38-276 15-203 (276)
122 4e54_B DNA damage-binding prot 95.8 0.23 7.8E-06 46.3 15.2 177 39-271 143-328 (435)
123 1npe_A Nidogen, entactin; glyc 95.8 0.82 2.8E-05 39.2 21.2 222 38-342 10-239 (267)
124 2ynn_A Coatomer subunit beta'; 95.8 0.23 7.8E-06 43.8 14.3 135 108-271 35-173 (304)
125 3g4e_A Regucalcin; six bladed 95.8 0.19 6.5E-06 44.2 13.7 184 38-276 35-235 (297)
126 3zwl_B Eukaryotic translation 95.7 0.82 2.8E-05 40.6 18.2 67 139-229 186-255 (369)
127 3i2n_A WD repeat-containing pr 95.7 0.38 1.3E-05 42.7 15.8 142 108-275 44-204 (357)
128 1got_B GT-beta; complex (GTP-b 95.7 0.6 2.1E-05 41.7 17.2 136 108-272 77-217 (340)
129 1jmx_B Amine dehydrogenase; ox 95.7 0.46 1.6E-05 42.0 16.2 57 38-122 21-79 (349)
130 3scy_A Hypothetical bacterial 95.7 1.1 3.9E-05 40.0 19.4 60 214-276 233-299 (361)
131 3bg1_A Protein SEC13 homolog; 95.6 0.22 7.6E-06 44.1 13.8 67 140-228 71-142 (316)
132 1kb0_A Quinohemoprotein alcoho 95.6 2 6.9E-05 42.7 25.6 118 70-229 73-207 (677)
133 4aow_A Guanine nucleotide-bind 95.6 0.66 2.3E-05 40.8 16.9 137 108-272 108-248 (340)
134 3hfq_A Uncharacterized protein 95.6 0.19 6.6E-06 44.9 13.3 144 109-276 19-178 (347)
135 3mkq_A Coatomer beta'-subunit; 95.6 0.24 8.2E-06 50.0 15.2 138 108-272 35-174 (814)
136 2hz6_A Endoplasmic reticulum t 95.5 0.008 2.7E-07 55.4 3.8 131 108-276 19-157 (369)
137 3i2n_A WD repeat-containing pr 95.5 0.18 6.1E-06 44.9 12.7 103 139-270 128-243 (357)
138 1erj_A Transcriptional repress 95.5 0.21 7.3E-06 45.8 13.3 135 108-271 145-288 (393)
139 4gga_A P55CDC, cell division c 95.4 1.6 5.5E-05 40.1 20.7 183 38-275 125-315 (420)
140 2ojh_A Uncharacterized protein 95.4 0.29 1E-05 41.9 13.4 190 38-276 62-264 (297)
141 3odt_A Protein DOA1; ubiquitin 95.4 0.77 2.6E-05 39.8 16.2 132 108-269 39-173 (313)
142 4a11_B DNA excision repair pro 95.3 1.4 4.7E-05 39.8 18.4 138 108-273 122-279 (408)
143 2p4o_A Hypothetical protein; p 95.3 1.4 4.8E-05 38.7 20.4 182 38-276 53-247 (306)
144 3mmy_A MRNA export factor; mRN 95.3 1.1 3.6E-05 39.8 17.2 131 108-271 108-248 (368)
145 3e5z_A Putative gluconolactona 95.3 1.3 4.5E-05 38.4 20.1 185 38-276 50-252 (296)
146 1yfq_A Cell cycle arrest prote 95.3 0.95 3.3E-05 39.9 16.7 134 108-270 79-225 (342)
147 1pgu_A Actin interacting prote 95.2 0.47 1.6E-05 45.8 15.5 107 142-275 175-288 (615)
148 3ei3_B DNA damage-binding prot 95.1 0.72 2.5E-05 41.7 15.7 179 38-272 96-284 (383)
149 1w6s_A Methanol dehydrogenase 95.0 2.9 9.9E-05 40.9 22.0 120 69-229 57-199 (599)
150 1jmx_B Amine dehydrogenase; ox 95.0 0.28 9.7E-06 43.5 12.4 150 107-275 20-180 (349)
151 4a11_B DNA excision repair pro 95.0 0.87 3E-05 41.1 15.9 51 108-168 166-219 (408)
152 2bkl_A Prolyl endopeptidase; m 95.0 3.2 0.00011 41.2 21.7 207 38-276 94-313 (695)
153 1erj_A Transcriptional repress 95.0 2.1 7.2E-05 39.0 19.0 94 38-170 145-241 (393)
154 1pby_B Quinohemoprotein amine 94.9 1.1 3.9E-05 39.1 16.0 107 38-171 11-128 (337)
155 2pbi_B Guanine nucleotide-bind 94.9 0.94 3.2E-05 40.8 15.7 140 108-275 86-234 (354)
156 2xbg_A YCF48-like protein; pho 94.9 2 6.8E-05 38.3 19.0 170 47-276 108-285 (327)
157 3lrv_A PRE-mRNA-splicing facto 94.9 2 6.7E-05 38.2 18.6 66 189-273 138-204 (343)
158 1qks_A Cytochrome CD1 nitrite 94.7 1.3 4.3E-05 43.2 16.9 181 38-275 177-378 (567)
159 3sfz_A APAF-1, apoptotic pepti 94.7 0.29 9.9E-06 52.2 13.5 176 38-273 1025-1210(1249)
160 2xyi_A Probable histone-bindin 94.7 1.1 3.7E-05 41.6 15.9 105 139-270 243-353 (430)
161 3ott_A Two-component system se 94.7 2.4 8.2E-05 42.6 19.5 134 109-276 83-226 (758)
162 3ott_A Two-component system se 94.7 1.3 4.5E-05 44.6 17.6 106 139-276 482-592 (758)
163 1yfq_A Cell cycle arrest prote 94.6 1.8 6.2E-05 38.0 16.7 103 138-270 66-179 (342)
164 2xyi_A Probable histone-bindin 94.6 1.7 5.8E-05 40.2 17.0 103 142-270 196-309 (430)
165 4gga_A P55CDC, cell division c 94.5 0.75 2.6E-05 42.4 14.4 135 108-271 125-262 (420)
166 3c5m_A Oligogalacturonate lyas 94.5 0.66 2.3E-05 41.9 13.8 153 106-276 166-335 (396)
167 3k26_A Polycomb protein EED; W 94.5 2.3 8E-05 37.5 20.4 94 38-168 95-193 (366)
168 4e54_B DNA damage-binding prot 94.5 0.37 1.3E-05 44.9 12.2 108 139-272 131-242 (435)
169 2dg1_A DRP35, lactonase; beta 94.4 0.5 1.7E-05 41.9 12.4 119 139-276 55-177 (333)
170 2bkl_A Prolyl endopeptidase; m 94.4 4.4 0.00015 40.2 23.2 203 38-276 147-357 (695)
171 1nir_A Nitrite reductase; hemo 94.4 3.8 0.00013 39.4 21.6 146 107-273 301-461 (543)
172 2fp8_A Strictosidine synthase; 94.4 1.5 5.3E-05 38.7 15.6 194 38-276 40-275 (322)
173 1pex_A Collagenase-3, MMP-13; 94.3 2 6.7E-05 35.8 18.1 148 69-275 28-197 (207)
174 3sfz_A APAF-1, apoptotic pepti 94.3 0.73 2.5E-05 49.1 15.3 175 108-342 983-1159(1249)
175 3e5z_A Putative gluconolactona 94.2 2 6.9E-05 37.2 15.8 146 108-273 50-206 (296)
176 3dm0_A Maltose-binding peripla 94.2 1.9 6.4E-05 42.8 17.3 137 108-272 452-594 (694)
177 3iz6_a 40S ribosomal protein R 94.2 2.8 9.4E-05 38.0 17.2 182 108-342 180-376 (380)
178 2xbg_A YCF48-like protein; pho 94.1 3 0.0001 37.1 20.9 178 40-276 58-241 (327)
179 2dg1_A DRP35, lactonase; beta 94.0 0.5 1.7E-05 41.9 11.6 143 108-270 66-213 (333)
180 2z3z_A Dipeptidyl aminopeptida 94.0 2.1 7.3E-05 42.3 17.2 194 37-272 234-437 (706)
181 1pgu_A Actin interacting prote 93.9 2.5 8.5E-05 40.6 17.2 103 140-271 456-573 (615)
182 1nr0_A Actin interacting prote 93.8 2.3 7.9E-05 41.4 16.8 108 139-272 201-315 (611)
183 1npe_A Nidogen, entactin; glyc 93.7 2.9 0.0001 35.6 21.2 180 38-275 58-243 (267)
184 3f3f_A Nucleoporin SEH1; struc 93.6 3.3 0.00011 35.9 19.5 64 140-225 71-145 (351)
185 4ggc_A P55CDC, cell division c 93.6 3.2 0.00011 35.8 20.4 137 38-225 45-183 (318)
186 3azo_A Aminopeptidase; POP fam 93.6 1.7 5.7E-05 42.7 15.5 148 107-277 216-376 (662)
187 1kv9_A Type II quinohemoprotei 93.6 6.3 0.00021 39.0 24.2 118 70-229 62-195 (668)
188 3pe7_A Oligogalacturonate lyas 93.5 1.9 6.4E-05 38.8 14.7 156 108-276 168-335 (388)
189 3iz6_a 40S ribosomal protein R 93.5 3.3 0.00011 37.5 16.4 136 108-270 88-237 (380)
190 3c5m_A Oligogalacturonate lyas 93.3 1 3.6E-05 40.6 12.7 159 108-276 216-390 (396)
191 3b7f_A Glycosyl hydrolase, BNR 93.3 4.8 0.00016 36.7 18.5 182 40-276 33-268 (394)
192 2xdw_A Prolyl endopeptidase; a 93.2 7.3 0.00025 38.6 23.2 208 38-276 98-329 (710)
193 2xzm_R RACK1; ribosome, transl 93.2 3.7 0.00013 36.4 16.0 62 139-224 87-150 (343)
194 3pe7_A Oligogalacturonate lyas 93.1 4.6 0.00016 36.2 17.3 158 108-276 60-231 (388)
195 2ghs_A AGR_C_1268P; regucalcin 93.1 4.4 0.00015 35.8 16.3 182 38-276 71-266 (326)
196 1qks_A Cytochrome CD1 nitrite 93.1 6.9 0.00023 38.0 18.7 196 107-342 319-539 (567)
197 3hxj_A Pyrrolo-quinoline quino 93.0 4.3 0.00015 35.4 16.1 127 108-275 157-290 (330)
198 1yiq_A Quinohemoprotein alcoho 93.0 5.2 0.00018 39.8 18.0 137 106-276 47-200 (689)
199 3dm0_A Maltose-binding peripla 92.9 3.7 0.00013 40.6 16.8 109 139-274 441-554 (694)
200 3g4e_A Regucalcin; six bladed 92.8 2.3 8E-05 37.0 13.7 143 107-273 34-185 (297)
201 3v65_B Low-density lipoprotein 92.7 5.8 0.0002 36.2 22.4 200 38-319 96-305 (386)
202 3hrp_A Uncharacterized protein 92.7 6.1 0.00021 36.4 20.7 135 108-271 152-299 (409)
203 2fp8_A Strictosidine synthase; 92.6 3.4 0.00012 36.4 14.7 141 107-271 164-314 (322)
204 1kv9_A Type II quinohemoprotei 92.6 1.7 5.7E-05 43.3 13.7 123 185-349 62-195 (668)
205 1ijq_A LDL receptor, low-densi 92.5 5.3 0.00018 35.3 20.1 136 108-272 99-240 (316)
206 2vdu_B TRNA (guanine-N(7)-)-me 92.5 6.6 0.00023 36.3 19.7 60 214-274 330-397 (450)
207 1qhu_A Protein (hemopexin); be 92.4 7.3 0.00025 36.6 20.3 46 139-197 158-205 (460)
208 2ymu_A WD-40 repeat protein; u 92.4 4.1 0.00014 38.8 16.0 108 139-276 437-545 (577)
209 1qhu_A Protein (hemopexin); be 92.4 7.4 0.00025 36.6 18.6 47 109-168 168-216 (460)
210 1kb0_A Quinohemoprotein alcoho 92.3 1.7 5.7E-05 43.4 13.4 125 185-350 73-208 (677)
211 3o4h_A Acylamino-acid-releasin 92.2 7.7 0.00026 37.2 17.8 57 216-276 134-190 (582)
212 1su3_A Interstitial collagenas 92.1 3.2 0.00011 39.0 14.2 65 189-275 367-437 (450)
213 1pex_A Collagenase-3, MMP-13; 92.0 4.6 0.00016 33.5 15.3 152 134-342 28-193 (207)
214 1yiq_A Quinohemoprotein alcoho 92.0 2.2 7.5E-05 42.6 13.8 123 186-349 67-200 (689)
215 2ecf_A Dipeptidyl peptidase IV 91.9 5.6 0.00019 39.4 16.8 99 107-230 63-188 (741)
216 1itv_A MMP9; adaptive molecula 91.7 4.8 0.00016 33.0 15.6 147 69-274 11-178 (195)
217 3m0c_C LDL receptor, low-densi 91.7 12 0.00043 37.8 22.1 201 39-319 405-619 (791)
218 3o4h_A Acylamino-acid-releasin 91.6 3.5 0.00012 39.7 14.6 97 111-227 135-231 (582)
219 3frx_A Guanine nucleotide-bind 91.6 6.5 0.00022 34.4 17.8 61 141-225 167-229 (319)
220 1n7d_A LDL receptor, low-densi 91.6 2.6 8.8E-05 42.2 13.7 177 39-276 387-577 (699)
221 2ad6_A Methanol dehydrogenase 91.5 3.2 0.00011 40.3 14.1 124 185-349 58-193 (571)
222 1pjx_A Dfpase, DIISOPROPYLFLUO 91.3 2.6 8.7E-05 36.6 12.2 190 39-271 93-300 (314)
223 1pby_B Quinohemoprotein amine 91.3 2.2 7.5E-05 37.2 11.8 147 107-274 10-167 (337)
224 1flg_A Protein (quinoprotein e 91.2 11 0.00039 36.5 22.9 117 70-228 64-200 (582)
225 3oyo_A Hemopexin fold protein 91.1 6.2 0.00021 33.2 13.8 100 138-269 69-197 (225)
226 1ijq_A LDL receptor, low-densi 91.1 7.6 0.00026 34.2 26.3 176 38-276 10-201 (316)
227 4ggc_A P55CDC, cell division c 91.0 5 0.00017 34.5 13.8 136 108-272 45-183 (318)
228 3mmy_A MRNA export factor; mRN 90.7 8 0.00027 33.8 18.6 103 139-271 97-200 (368)
229 3iuj_A Prolyl endopeptidase; h 90.6 14 0.00049 36.5 23.1 149 106-276 206-365 (693)
230 1n7d_A LDL receptor, low-densi 90.4 4.6 0.00016 40.3 14.3 137 108-275 475-619 (699)
231 3c7x_A Matrix metalloproteinas 90.3 6.7 0.00023 32.2 14.9 103 138-272 60-177 (196)
232 3gre_A Serine/threonine-protei 90.2 9.6 0.00033 34.7 15.6 139 108-272 192-361 (437)
233 2gop_A Trilobed protease; beta 89.8 9.5 0.00033 33.4 14.8 149 107-276 84-257 (347)
234 3p5b_L Low density lipoprotein 89.8 12 0.00041 34.3 21.1 202 38-319 92-307 (400)
235 3hrp_A Uncharacterized protein 89.7 12 0.00042 34.3 19.3 141 109-276 195-360 (409)
236 3v65_B Low-density lipoprotein 89.6 12 0.0004 34.1 18.3 133 108-271 181-319 (386)
237 1nr0_A Actin interacting prote 89.4 15 0.00051 35.6 17.0 27 246-276 459-485 (611)
238 3frx_A Guanine nucleotide-bind 89.2 11 0.00036 33.0 16.6 104 139-273 76-188 (319)
239 1yr2_A Prolyl oligopeptidase; 89.0 20 0.00067 35.7 20.7 155 108-276 189-358 (741)
240 3fvz_A Peptidyl-glycine alpha- 88.8 12 0.0004 32.9 21.9 161 69-270 147-322 (329)
241 2xdw_A Prolyl endopeptidase; a 88.8 20 0.00067 35.5 25.5 151 107-276 207-375 (710)
242 3hxj_A Pyrrolo-quinoline quino 88.7 11 0.00038 32.6 16.3 124 108-272 117-246 (330)
243 2ymu_A WD-40 repeat protein; u 88.6 17 0.00057 34.5 19.1 108 139-276 396-504 (577)
244 3gre_A Serine/threonine-protei 88.5 3.2 0.00011 38.1 10.9 107 139-272 181-294 (437)
245 1itv_A MMP9; adaptive molecula 88.4 9.3 0.00032 31.3 12.6 152 134-342 11-175 (195)
246 3p5b_L Low density lipoprotein 88.3 15 0.00052 33.6 18.9 135 108-271 181-321 (400)
247 3lrv_A PRE-mRNA-splicing facto 88.2 13 0.00044 32.7 16.7 140 108-275 149-299 (343)
248 3dr2_A Exported gluconolactona 88.1 12 0.00042 32.3 17.9 150 108-276 107-273 (305)
249 3ba0_A Macrophage metalloelast 87.9 15 0.00053 33.2 15.4 105 139-275 236-355 (365)
250 2ghs_A AGR_C_1268P; regucalcin 87.6 8.9 0.0003 33.8 13.0 133 108-269 71-209 (326)
251 1w6s_A Methanol dehydrogenase 87.2 4.8 0.00016 39.4 11.6 125 185-350 58-200 (599)
252 2ecf_A Dipeptidyl peptidase IV 86.6 26 0.00089 34.5 22.1 104 159-276 264-374 (741)
253 1flg_A Protein (quinoprotein e 86.4 13 0.00045 36.1 14.2 117 134-275 63-200 (582)
254 3b7f_A Glycosyl hydrolase, BNR 86.3 19 0.00065 32.6 22.2 144 39-231 82-270 (394)
255 3lp9_A LS-24; SEED albumin, pl 85.8 4.1 0.00014 34.3 9.0 61 189-271 129-202 (227)
256 3m0c_C LDL receptor, low-densi 85.0 35 0.0012 34.5 21.3 135 107-271 492-633 (791)
257 3ju4_A Endo-N-acetylneuraminid 84.7 24 0.00083 32.4 18.6 127 116-254 268-405 (670)
258 1yr2_A Prolyl oligopeptidase; 84.6 34 0.0011 34.0 22.6 104 157-276 293-401 (741)
259 3dw8_B Serine/threonine-protei 84.6 18 0.00063 32.7 13.9 20 246-270 296-315 (447)
260 3v64_C Agrin; beta propeller, 84.6 22 0.00074 31.8 22.0 133 108-271 138-276 (349)
261 3v64_C Agrin; beta propeller, 84.4 22 0.00075 31.7 25.8 200 38-319 53-262 (349)
262 4h5i_A Guanine nucleotide-exch 84.2 22 0.00077 31.7 23.5 142 107-272 156-302 (365)
263 1su3_A Interstitial collagenas 83.5 25 0.00085 32.9 14.1 149 134-342 267-433 (450)
264 2hz6_A Endoplasmic reticulum t 83.4 1.1 3.6E-05 41.0 4.6 66 186-275 6-75 (369)
265 4h5i_A Guanine nucleotide-exch 82.6 19 0.00065 32.1 12.8 142 158-342 157-301 (365)
266 3sjl_D Methylamine dehydrogena 81.0 33 0.0011 31.3 18.1 105 38-171 59-173 (386)
267 2ece_A 462AA long hypothetical 80.6 24 0.00081 33.1 12.6 162 107-276 105-295 (462)
268 2p4o_A Hypothetical protein; p 80.5 28 0.00095 30.1 16.3 162 40-254 97-277 (306)
269 1k32_A Tricorn protease; prote 80.3 59 0.002 33.8 18.6 97 158-276 317-415 (1045)
270 1hxn_A Hemopexin, HPX; heme, b 80.0 25 0.00085 29.3 13.2 101 135-270 68-197 (219)
271 3tc9_A Hypothetical hydrolase; 79.8 8.5 0.00029 35.7 9.5 133 108-269 159-300 (430)
272 3iuj_A Prolyl endopeptidase; h 79.2 51 0.0017 32.4 21.8 155 107-276 154-323 (693)
273 2xzm_R RACK1; ribosome, transl 78.9 33 0.0011 30.0 19.5 21 312-341 320-340 (343)
274 2gop_A Trilobed protease; beta 77.4 35 0.0012 29.6 14.7 153 106-276 41-213 (347)
275 1xfd_A DIP, dipeptidyl aminope 77.2 57 0.0019 31.9 17.5 62 158-229 228-295 (723)
276 3tc9_A Hypothetical hydrolase; 76.9 31 0.0011 31.9 12.4 111 139-276 149-263 (430)
277 3ba0_A Macrophage metalloelast 76.6 43 0.0015 30.2 13.9 152 134-342 185-351 (365)
278 1k32_A Tricorn protease; prote 76.4 48 0.0016 34.5 15.0 142 109-276 318-467 (1045)
279 3c75_H MADH, methylamine dehyd 76.3 48 0.0017 30.6 16.8 104 38-170 99-212 (426)
280 2oaj_A Protein SNI1; WD40 repe 75.2 77 0.0026 32.4 19.2 106 140-274 69-186 (902)
281 1gen_A Gelatinase A; hydrolase 74.3 36 0.0012 28.2 13.7 103 134-272 35-155 (218)
282 3dr2_A Exported gluconolactona 73.9 42 0.0014 28.8 12.8 113 139-276 56-184 (305)
283 2mad_H Methylamine dehydrogena 71.4 58 0.002 29.3 25.0 101 39-170 48-159 (373)
284 3vu4_A KMHSV2; beta-propeller 70.9 55 0.0019 28.8 18.8 63 189-271 206-272 (355)
285 1gen_A Gelatinase A; hydrolase 70.0 46 0.0016 27.6 16.0 101 139-272 87-204 (218)
286 3c7x_A Matrix metalloproteinas 69.8 43 0.0015 27.2 13.7 106 134-272 10-129 (196)
287 2oiz_A Aromatic amine dehydrog 69.7 60 0.0021 28.8 20.2 104 38-170 31-143 (361)
288 3ju4_A Endo-N-acetylneuraminid 67.6 77 0.0026 29.2 15.8 135 45-202 267-410 (670)
289 4a0p_A LRP6, LRP-6, low-densit 66.5 99 0.0034 30.1 25.6 199 38-319 15-224 (628)
290 3dw8_B Serine/threonine-protei 66.4 73 0.0025 28.5 15.0 22 248-273 240-261 (447)
291 2qe8_A Uncharacterized protein 66.4 67 0.0023 28.1 17.8 85 66-173 68-161 (343)
292 3sjl_D Methylamine dehydrogena 66.4 78 0.0027 28.8 18.0 30 246-275 291-325 (386)
293 3lp9_A LS-24; SEED albumin, pl 66.2 18 0.00062 30.3 7.3 59 139-224 129-202 (227)
294 3vu4_A KMHSV2; beta-propeller 65.0 73 0.0025 28.0 17.9 100 139-272 70-170 (355)
295 3sov_A LRP-6, low-density lipo 64.9 72 0.0025 27.9 21.1 134 108-272 101-240 (318)
296 3qhy_B Beta-lactamase inhibito 64.5 37 0.0012 29.3 9.3 18 66-83 72-89 (282)
297 3sov_A LRP-6, low-density lipo 60.5 86 0.003 27.4 20.7 137 107-276 56-203 (318)
298 4hw6_A Hypothetical protein, I 59.8 1.1E+02 0.0036 28.2 13.6 108 140-273 153-262 (433)
299 2p9w_A MAL S 1 allergenic prot 59.2 98 0.0033 27.5 16.8 100 37-167 99-215 (334)
300 1ck7_A Protein (gelatinase A); 57.7 85 0.0029 30.7 11.2 62 188-271 547-616 (631)
301 2p9w_A MAL S 1 allergenic prot 57.4 1E+02 0.0036 27.3 20.4 250 38-340 35-322 (334)
302 3c75_H MADH, methylamine dehyd 56.7 1.2E+02 0.0042 27.9 13.0 72 189-272 330-404 (426)
303 2be1_A Serine/threonine-protei 56.6 40 0.0014 30.1 8.2 114 214-353 20-142 (339)
304 3oyo_A Hemopexin fold protein 55.6 89 0.003 25.9 11.5 59 139-223 127-198 (225)
305 1fwx_A Nitrous oxide reductase 52.8 1.7E+02 0.0058 28.4 13.6 157 107-271 111-309 (595)
306 1jof_A Carboxy-CIS,CIS-muconat 52.3 1.2E+02 0.0041 26.5 16.7 56 215-274 283-345 (365)
307 1xfd_A DIP, dipeptidyl aminope 51.5 1.8E+02 0.006 28.2 14.5 67 109-175 38-108 (723)
308 2xe4_A Oligopeptidase B; hydro 50.8 2E+02 0.0067 28.5 15.7 149 107-277 294-465 (751)
309 1ck7_A Protein (gelatinase A); 49.1 1.3E+02 0.0046 29.3 11.1 21 245-271 547-567 (631)
310 4a0p_A LRP6, LRP-6, low-densit 47.9 2E+02 0.007 27.9 21.4 140 108-276 15-161 (628)
311 2oaj_A Protein SNI1; WD40 repe 47.0 2.5E+02 0.0084 28.6 16.3 24 246-273 222-245 (902)
312 2mad_H Methylamine dehydrogena 47.0 1.6E+02 0.0054 26.3 24.1 28 246-273 278-310 (373)
313 2oiz_A Aromatic amine dehydrog 44.7 1.6E+02 0.0056 25.9 18.6 74 189-276 265-340 (361)
314 4hw6_A Hypothetical protein, I 43.8 1.7E+02 0.0057 26.8 10.6 133 108-269 162-303 (433)
315 2cn3_A Xyloglucanase, beta-1,4 43.6 2.5E+02 0.0086 27.7 24.7 201 40-277 47-290 (737)
316 4hvt_A Ritya.17583.B, post-pro 43.0 2.6E+02 0.0089 27.7 14.5 151 107-277 268-436 (711)
317 2xe4_A Oligopeptidase B; hydro 39.2 3E+02 0.01 27.2 18.1 60 214-275 295-360 (751)
318 1sqj_A OXG-RCBH, oligoxylogluc 36.3 3.4E+02 0.012 27.1 27.0 197 40-277 39-276 (789)
319 3a0f_A Xyloglucanase; beta-pro 35.9 3.4E+02 0.012 27.0 21.1 147 109-276 44-219 (763)
320 2ece_A 462AA long hypothetical 34.8 2.8E+02 0.0097 25.8 15.1 73 139-228 95-178 (462)
321 4d9s_A UVB-resistance protein 34.5 2.6E+02 0.0088 25.2 12.6 17 67-83 131-148 (406)
322 1fwx_A Nitrous oxide reductase 30.7 3.8E+02 0.013 25.9 11.9 78 139-225 101-186 (595)
323 2cn3_A Xyloglucanase, beta-1,4 29.6 4.2E+02 0.014 26.1 22.1 208 108-354 45-294 (737)
324 2qe8_A Uncharacterized protein 29.3 2.8E+02 0.0095 23.9 14.8 122 139-276 27-161 (343)
325 1z68_A Fibroblast activation p 28.1 4.1E+02 0.014 25.6 15.2 223 33-319 85-374 (719)
326 2oit_A Nucleoporin 214KDA; NH2 27.5 3.5E+02 0.012 24.5 12.8 52 214-271 172-224 (434)
327 1sqj_A OXG-RCBH, oligoxylogluc 25.7 5.1E+02 0.017 25.8 21.6 63 109-174 38-108 (789)
328 3qhy_B Beta-lactamase inhibito 24.3 1.1E+02 0.0038 26.1 5.5 55 132-197 190-244 (282)
329 2oit_A Nucleoporin 214KDA; NH2 23.3 4.1E+02 0.014 23.9 12.9 49 108-166 172-222 (434)
330 4a5s_A Dipeptidyl peptidase 4 22.5 5.4E+02 0.019 25.0 19.4 108 158-276 228-359 (740)
331 2b4w_A Hypothetical protein, c 22.3 2.3E+02 0.0078 24.5 6.7 58 244-322 38-99 (315)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.6e-47 Score=350.17 Aligned_cols=271 Identities=25% Similarity=0.426 Sum_probs=237.4
Q ss_pred ccccceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEE
Q 042957 35 NISNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYN 114 (371)
Q Consensus 35 ~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 114 (371)
...+++++||+.+++|..++++| .+|..|++++++++|||+||..... ......+++++||
T Consensus 36 ~~~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~~~~~lyv~GG~~~~~--------------~~~~~~~~~~~~d 96 (308)
T 1zgk_A 36 QSLSYLEAYNPSNGTWLRLADLQ-----VPRSGLAGCVVGGLLYAVGGRNNSP--------------DGNTDSSALDCYN 96 (308)
T ss_dssp SBCCCEEEEETTTTEEEECCCCS-----SCCBSCEEEEETTEEEEECCEEEET--------------TEEEECCCEEEEE
T ss_pred CCcceEEEEcCCCCeEeECCCCC-----cccccceEEEECCEEEEECCCcCCC--------------CCCeecceEEEEC
Confidence 45688999999999999998887 5689999999999999999983110 0335678999999
Q ss_pred CCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEE
Q 042957 115 VKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHV 194 (371)
Q Consensus 115 ~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv 194 (371)
+.+++|++++++|.+|..|+++.++++||++||... ....+++++||+.+++|+.++++|.+|..+++++++++||+
T Consensus 97 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 173 (308)
T 1zgk_A 97 PMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG---CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYA 173 (308)
T ss_dssp TTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEET---TEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred CCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCC---CcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEE
Confidence 999999999999999999999999999999999863 34578899999999999999999999999999999999999
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCC-CccCeEEEEeCCCCce
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLK-AWKGHIESYDGELNMW 273 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~-~~~~~~~~yd~~~~~W 273 (371)
+||..... ..+++++||+.+++|+.+..+|.++.. ++++.++++||++||... ...+++++||+++++|
T Consensus 174 ~GG~~~~~---------~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 174 VGGFDGTN---------RLNSAECYYPERNEWRMITAMNTIRSG-AGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp ECCBCSSC---------BCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EeCCCCCC---------cCceEEEEeCCCCeEeeCCCCCCcccc-ceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 99987654 457899999999999999999888764 678889999999999854 3457899999999999
Q ss_pred EeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccccccccccCccc
Q 042957 274 DEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIV 353 (371)
Q Consensus 274 ~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p 353 (371)
+.+ ++++.+ |..++++.++++|||+||.+.. ....++++||++++ +|+.++.||
T Consensus 244 ~~~-----~~~p~~---------------r~~~~~~~~~~~i~v~GG~~~~----~~~~~v~~yd~~~~--~W~~~~~~p 297 (308)
T 1zgk_A 244 TFV-----APMKHR---------------RSALGITVHQGRIYVLGGYDGH----TFLDSVECYDPDTD--TWSEVTRMT 297 (308)
T ss_dssp EEC-----CCCSSC---------------CBSCEEEEETTEEEEECCBCSS----CBCCEEEEEETTTT--EEEEEEECS
T ss_pred EEC-----CCCCCC---------------ccceEEEEECCEEEEEcCcCCC----cccceEEEEcCCCC--EEeecCCCC
Confidence 999 777654 9999999999999999998653 56789999999998 999999999
Q ss_pred cccccccccceeeE
Q 042957 354 EEGEKELCSHCCVV 367 (371)
Q Consensus 354 ~~~~~~~~~~~~~~ 367 (371)
.+++.|+|++
T Consensus 298 ----~~r~~~~~~~ 307 (308)
T 1zgk_A 298 ----SGRSGVGVAV 307 (308)
T ss_dssp ----SCCBSCEEEE
T ss_pred ----CCcccceeEe
Confidence 5778888876
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.3e-47 Score=348.29 Aligned_cols=269 Identities=19% Similarity=0.326 Sum_probs=234.4
Q ss_pred cccceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 36 ISNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 36 ~~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..+++++||+.+++|..++++| .+|..|++++++++|||+||.. .....+++++||+
T Consensus 28 ~~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~~~~~lyv~GG~~------------------~~~~~~~~~~~d~ 84 (302)
T 2xn4_A 28 AIRSVECYDFKEERWHQVAELP-----SRRCRAGMVYMAGLVFAVGGFN------------------GSLRVRTVDSYDP 84 (302)
T ss_dssp BCCCEEEEETTTTEEEEECCCS-----SCCBSCEEEEETTEEEEESCBC------------------SSSBCCCEEEEET
T ss_pred CCCcEEEEcCcCCcEeEcccCC-----cccccceEEEECCEEEEEeCcC------------------CCccccceEEECC
Confidence 4678999999999999999887 4688999999999999999986 2245789999999
Q ss_pred CCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEE
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVV 195 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~ 195 (371)
.+++|++++++|.+|..|+++.++++||++||.+. ...++++++||+.+++|+.++++|.+|..+++++++++||++
T Consensus 85 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 161 (302)
T 2xn4_A 85 VKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDG---STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAV 161 (302)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECS---SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred CCCceeeCCCCCccccceEEEEECCEEEEEcCCCC---CccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEE
Confidence 99999999999999999999999999999999863 345789999999999999999999999999999999999999
Q ss_pred ecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCC-ccCeEEEEeCCCCceE
Q 042957 196 SGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKA-WKGHIESYDGELNMWD 274 (371)
Q Consensus 196 GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~yd~~~~~W~ 274 (371)
||....... ..+++++||+.+++|+.+.++|.++.. +++++++++||++||.... ..+++++||+++++|+
T Consensus 162 GG~~~~~~~-------~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 162 GGYDVASRQ-------CLSTVECYNATTNEWTYIAEMSTRRSG-AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp CCEETTTTE-------ECCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred eCCCCCCCc-------cccEEEEEeCCCCcEEECCCCcccccc-ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 998765311 457899999999999999999887764 6888999999999998543 3578999999999999
Q ss_pred eecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccccccccccC-ccc
Q 042957 275 EVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFE-PIV 353 (371)
Q Consensus 275 ~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~-~~p 353 (371)
.+ ++++.+ |..|+++.++++|||+||.+.. ....++++||++++ +|+.++ .||
T Consensus 234 ~~-----~~~~~~---------------r~~~~~~~~~~~i~v~GG~~~~----~~~~~v~~yd~~~~--~W~~~~~~~~ 287 (302)
T 2xn4_A 234 QV-----ADMNMC---------------RRNAGVCAVNGLLYVVGGDDGS----CNLASVEYYNPTTD--KWTVVSSCMS 287 (302)
T ss_dssp EE-----CCCSSC---------------CBSCEEEEETTEEEEECCBCSS----SBCCCEEEEETTTT--EEEECSSCCS
T ss_pred eC-----CCCCCc---------------cccCeEEEECCEEEEECCcCCC----cccccEEEEcCCCC--eEEECCcccC
Confidence 99 777654 9999999999999999998653 45789999999998 999997 788
Q ss_pred cccccccccceeeEE
Q 042957 354 EEGEKELCSHCCVVQ 368 (371)
Q Consensus 354 ~~~~~~~~~~~~~~~ 368 (371)
.+++.|+|++.
T Consensus 288 ----~~r~~~~~~~~ 298 (302)
T 2xn4_A 288 ----TGRSYAGVTVI 298 (302)
T ss_dssp ----SCCBSCEEEEE
T ss_pred ----cccccceEEEe
Confidence 56667776653
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=5.1e-47 Score=347.72 Aligned_cols=271 Identities=23% Similarity=0.357 Sum_probs=237.3
Q ss_pred ccceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 37 SNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 37 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
.+++++||+.+++|..++++| .+|..|++++++++|||+||.. ....+++++||+.
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~~~~~lyv~GG~~-------------------~~~~~~~~~~d~~ 78 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPF-----EKRRDAACVFWDNVVYILGGSQ-------------------LFPIKRMDCYNVV 78 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCS-----CCCBSCEEEEETTEEEEECCBS-------------------SSBCCEEEEEETT
T ss_pred CceEEEecCCCCCEecCCCCC-----cccceeEEEEECCEEEEEeCCC-------------------CCCcceEEEEeCC
Confidence 578999999999999999887 5689999999999999999985 1457899999999
Q ss_pred CCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEe
Q 042957 117 SNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVS 196 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~G 196 (371)
+++|+.++++|.+|..|+++.++++||++||.+. .....+++++||+.+++|++++++|.+|..++++.++++||++|
T Consensus 79 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 156 (306)
T 3ii7_A 79 KDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEV--GNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCG 156 (306)
T ss_dssp TTEEEEEECCSSCCBSCEEEEETTEEEEECCBBT--TBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred CCeEEECCCCCccccceeEEEECCEEEEECCCCC--CCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEEC
Confidence 9999999999999999999999999999999863 34567899999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCC-ccCeEEEEeCCCCceEe
Q 042957 197 GFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKA-WKGHIESYDGELNMWDE 275 (371)
Q Consensus 197 G~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~yd~~~~~W~~ 275 (371)
|........ ...+++++||+.+++|+.+.+++.++. .++++.++++||++||.... ..+++++||+++++|+.
T Consensus 157 G~~~~~~~~-----~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 230 (306)
T 3ii7_A 157 GSLGNNVSG-----RVLNSCEVYDPATETWTELCPMIEARK-NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM 230 (306)
T ss_dssp CEESCTTTC-----EECCCEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEE
T ss_pred CCCCCCCcc-----cccceEEEeCCCCCeEEECCCccchhh-cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEE
Confidence 987654210 026889999999999999999988776 46888899999999997443 35789999999999999
Q ss_pred ecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccccccccccCccccc
Q 042957 276 VNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIVEE 355 (371)
Q Consensus 276 ~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p~~ 355 (371)
+ ++++.+ |..++++.++++|||+||.+.. ....+++.||++++ +|+.++.||
T Consensus 231 ~-----~~~p~~---------------r~~~~~~~~~~~i~v~GG~~~~----~~~~~~~~yd~~~~--~W~~~~~~~-- 282 (306)
T 3ii7_A 231 V-----SPMPWK---------------GVTVKCAAVGSIVYVLAGFQGV----GRLGHILEYNTETD--KWVANSKVR-- 282 (306)
T ss_dssp C-----CCCSCC---------------BSCCEEEEETTEEEEEECBCSS----SBCCEEEEEETTTT--EEEEEEEEE--
T ss_pred C-----CCCCCC---------------ccceeEEEECCEEEEEeCcCCC----eeeeeEEEEcCCCC--eEEeCCCcc--
Confidence 9 777654 9999999999999999998754 45779999999998 999999999
Q ss_pred cccccccceeeEEe
Q 042957 356 GEKELCSHCCVVQL 369 (371)
Q Consensus 356 ~~~~~~~~~~~~~~ 369 (371)
.++..|+|++..
T Consensus 283 --~~r~~~~~~~~~ 294 (306)
T 3ii7_A 283 --AFPVTSCLICVV 294 (306)
T ss_dssp --CCSCTTCEEEEE
T ss_pred --cccceeEEEEEC
Confidence 577778887654
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-46 Score=342.68 Aligned_cols=268 Identities=25% Similarity=0.442 Sum_probs=237.5
Q ss_pred ccccceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEE
Q 042957 35 NISNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYN 114 (371)
Q Consensus 35 ~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 114 (371)
...+++++||+.+++|..++++| .+|..|+++.++++|||+||.. .....+++++||
T Consensus 28 ~~~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~~~~~l~v~GG~~------------------~~~~~~~~~~~d 84 (301)
T 2vpj_A 28 SPIDVVEKYDPKTQEWSFLPSIT-----RKRRYVASVSLHDRIYVIGGYD------------------GRSRLSSVECLD 84 (301)
T ss_dssp EECCCEEEEETTTTEEEECCCCS-----SCCBSCEEEEETTEEEEECCBC------------------SSCBCCCEEEEE
T ss_pred cceeEEEEEcCCCCeEEeCCCCC-----hhhccccEEEECCEEEEEcCCC------------------CCccCceEEEEE
Confidence 45688999999999999999887 4689999999999999999986 234578999999
Q ss_pred CCCCe---eeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCE
Q 042957 115 VKSNE---WTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGK 191 (371)
Q Consensus 115 ~~~~~---W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~ 191 (371)
+.+++ |++++++|.+|..|+++.++++||++||... ....+++++||+.+++|+.++++|.+|..+++++++++
T Consensus 85 ~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~---~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ 161 (301)
T 2vpj_A 85 YTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDG---SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGV 161 (301)
T ss_dssp TTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCS---SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTE
T ss_pred CCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCC---CcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCE
Confidence 99999 9999999999999999999999999999874 33578999999999999999999999999999999999
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCc-cCeEEEEeCCC
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAW-KGHIESYDGEL 270 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~-~~~~~~yd~~~ 270 (371)
||++||..... ..+++++||+.+++|+.+.++|.++. .++++.++++||++||..... .+++++||+++
T Consensus 162 iyv~GG~~~~~---------~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 162 IYCLGGYDGLN---------ILNSVEKYDPHTGHWTNVTPMATKRS-GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp EEEECCBCSSC---------BCCCEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEEECCCCCCc---------ccceEEEEeCCCCcEEeCCCCCcccc-cceEEEECCEEEEEeCCCCCcccceEEEEeCCC
Confidence 99999987654 46899999999999999999888776 468888999999999985433 67899999999
Q ss_pred CceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccccccccccC
Q 042957 271 NMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFE 350 (371)
Q Consensus 271 ~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~ 350 (371)
++|+.+ ++++.+ |..|+++.++++|||+||.... ....+++.||++++ +|+.++
T Consensus 232 ~~W~~~-----~~~p~~---------------r~~~~~~~~~~~i~v~GG~~~~----~~~~~v~~yd~~~~--~W~~~~ 285 (301)
T 2vpj_A 232 DSWTTV-----TSMTTP---------------RCYVGATVLRGRLYAIAGYDGN----SLLSSIECYDPIID--SWEVVT 285 (301)
T ss_dssp TEEEEE-----CCCSSC---------------CBSCEEEEETTEEEEECCBCSS----SBEEEEEEEETTTT--EEEEEE
T ss_pred CcEEEC-----CCCCCc---------------ccceeEEEECCEEEEEcCcCCC----cccccEEEEcCCCC--eEEEcC
Confidence 999999 777654 9999999999999999998654 45789999999998 999999
Q ss_pred ccccccccccccceeeEE
Q 042957 351 PIVEEGEKELCSHCCVVQ 368 (371)
Q Consensus 351 ~~p~~~~~~~~~~~~~~~ 368 (371)
.|| .+++.|+|++.
T Consensus 286 ~~~----~~r~~~~~~~~ 299 (301)
T 2vpj_A 286 SMG----TQRCDAGVCVL 299 (301)
T ss_dssp EEE----EEEESCEEEEE
T ss_pred CCC----cccccceEEEe
Confidence 999 57788888764
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.2e-44 Score=333.32 Aligned_cols=269 Identities=19% Similarity=0.319 Sum_probs=225.1
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKS 117 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 117 (371)
+++++|||.+++|.. +++|. +.+|..|++++++++|||+||.....+. ......+++++||+.+
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~------------~~~~~~~~~~~~d~~~ 76 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSS---QVPKNHVSLVTKENQVFVAGGLFYNEDN------------KEDPMSAYFLQFDHLD 76 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCC---CSCSSEEEEECTTCCEEEEEEEEECSSC------------SSSCEEEEEEEEETTT
T ss_pred CceEEECCCCCeEec-CCCCC---CCCccceEEEEECCEEEEEcCcccCCCC------------CccccccceEEecCCC
Confidence 469999999999987 55653 2569999999999999999997422111 1223456799999999
Q ss_pred CeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEec
Q 042957 118 NEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSG 197 (371)
Q Consensus 118 ~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG 197 (371)
++|++++++|.+|..|+++.++++||++||.+........+++++||+.+++|++++++|.+|..++++.++++|||+||
T Consensus 77 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 77 SEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp TEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeC
Confidence 99999999999999999999999999999975322456688999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCC-ccCeEEEEeCCCCceEee
Q 042957 198 FAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKA-WKGHIESYDGELNMWDEV 276 (371)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~yd~~~~~W~~~ 276 (371)
...... ..+++++||+.+++|+.++++|.++.. +++++++++||++||.... ..+++++||+++++|+.+
T Consensus 157 ~~~~~~--------~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 157 KGSDRK--------CLNKMCVYDPKKFEWKELAPMQTARSL-FGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp BCTTSC--------BCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE
T ss_pred CCCCCc--------ccceEEEEeCCCCeEEECCCCCCchhc-eEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEEC
Confidence 854332 568999999999999999999888764 6788899999999998543 457899999999999999
Q ss_pred cCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecc----c-ccceeeEEEEeecccccccccccCc
Q 042957 277 NGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAG----E-LARTMSMVHIFDTAAKSDAWRSFEP 351 (371)
Q Consensus 277 ~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~----~-~~~~~~~v~~~d~~~~~~~W~~~~~ 351 (371)
++++.+ |..|+++.++++|||+||..... . ......++++||++++ +|+.+.+
T Consensus 228 -----~~~p~~---------------r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~ 285 (315)
T 4asc_A 228 -----EAFPQE---------------RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK--KWEGVLR 285 (315)
T ss_dssp -----CCCSSC---------------CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT--EEEEEES
T ss_pred -----CCCCCc---------------ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC--hhhhhcc
Confidence 777654 99999999999999999986531 1 1146789999999998 9999943
Q ss_pred cc
Q 042957 352 IV 353 (371)
Q Consensus 352 ~p 353 (371)
.|
T Consensus 286 ~~ 287 (315)
T 4asc_A 286 EI 287 (315)
T ss_dssp CS
T ss_pred CC
Confidence 33
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1e-43 Score=327.58 Aligned_cols=275 Identities=19% Similarity=0.362 Sum_probs=225.4
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSN 118 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 118 (371)
.+++|||.+++|.. .+++. +.+|..|++++.+++|||+||.....+. ......+++++||+.++
T Consensus 25 ~~~~yd~~~~~W~~-~~~~~---~~~r~~~~~~~~~~~lyv~GG~~~~~~~------------~~~~~~~~~~~~d~~~~ 88 (318)
T 2woz_A 25 AAVAYDPMENECYL-TALAE---QIPRNHSSIVTQQNQVYVVGGLYVDEEN------------KDQPLQSYFFQLDNVSS 88 (318)
T ss_dssp EEEEEETTTTEEEE-EEECT---TSCSSEEEEECSSSCEEEEESSCC-------------------CCCBEEEEEETTTT
T ss_pred ceEEECCCCCceec-ccCCc---cCCccceEEEEECCEEEEECCcccCccc------------cCCCccccEEEEeCCCC
Confidence 37999999999998 33432 2568999999999999999996421110 01123456999999999
Q ss_pred eeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecc
Q 042957 119 EWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGF 198 (371)
Q Consensus 119 ~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~ 198 (371)
+|++++++|.+|..|+++.++++||++||.... .....+++++||+.+++|++++++|.+|..+++++++++||++||.
T Consensus 89 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 89 EWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQ-TEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp EEEECSCBSSCBCSCEEEEETTEEEEEEEEBTT-TCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCE
T ss_pred cEEECCCCCccccccceEEECCEEEEEcCccCC-CCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCC
Confidence 999999999999999999999999999998632 3345789999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCC-ccCeEEEEeCCCCceEeec
Q 042957 199 AQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKA-WKGHIESYDGELNMWDEVN 277 (371)
Q Consensus 199 ~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~yd~~~~~W~~~~ 277 (371)
..... ..+++++||+.+++|+.+.+++.++.. +++++++++||++||.... ..+++++||+++++|+.+
T Consensus 168 ~~~~~--------~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~- 237 (318)
T 2woz_A 168 TDDKK--------CTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM- 237 (318)
T ss_dssp ESSSC--------BCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEEC-
T ss_pred CCCCC--------ccceEEEEcCCCCEEEECCCCCCCccc-ceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEEC-
Confidence 65432 568899999999999999999887764 6788899999999997543 357899999999999999
Q ss_pred CcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeeccc-----ccceeeEEEEeecccccccccccCcc
Q 042957 278 GSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGE-----LARTMSMVHIFDTAAKSDAWRSFEPI 352 (371)
Q Consensus 278 ~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~-----~~~~~~~v~~~d~~~~~~~W~~~~~~ 352 (371)
+++|.+ |..|+++.++++|||+||...... ......+++.||++++ +|+.+ +
T Consensus 238 ----~~~p~~---------------r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~--~ 294 (318)
T 2woz_A 238 ----TEFPQE---------------RSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK--EWAGM--L 294 (318)
T ss_dssp ----CCCSSC---------------CBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT--EEEEE--E
T ss_pred ----CCCCCc---------------ccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC--Eehhh--c
Confidence 777654 999999999999999999865311 0134689999999998 99999 5
Q ss_pred ccccccccccceeeE
Q 042957 353 VEEGEKELCSHCCVV 367 (371)
Q Consensus 353 p~~~~~~~~~~~~~~ 367 (371)
| ..++.|+|++
T Consensus 295 ~----~~r~~~~~~~ 305 (318)
T 2woz_A 295 K----EIRYASGASC 305 (318)
T ss_dssp S----CCGGGTTCEE
T ss_pred c----ccccccccee
Confidence 6 4566677665
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.4e-41 Score=316.58 Aligned_cols=267 Identities=16% Similarity=0.182 Sum_probs=211.1
Q ss_pred cceeEEeCC--CCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPS--NNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~--~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+++++||+. +++|..++++|. .+|..|++++++++|||+||.....+ .....++++|+||+
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~~p~----~~R~~~~~~~~~~~lyv~GG~~~~~~-------------~~~~~~~~v~~yd~ 93 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAAFPG----GPRDQATSAFIDGNLYVFGGIGKNSE-------------GLTQVFNDVHKYNP 93 (357)
T ss_dssp TCEEEEETTSSSCCEEECCCCTT----CCCBSCEEEEETTEEEEECCEEECTT-------------SCEEECCCEEEEET
T ss_pred CeEEEEccccCCCCeeECCCCCC----CcCccceEEEECCEEEEEcCCCCCCC-------------ccceeeccEEEEeC
Confidence 479999998 499999999872 35899999999999999999831000 12356889999999
Q ss_pred CCCeeeecCCCC-CCCCCeeEEEECCEEEEEcCCCCCC-------------------------------CCCCCceEEEE
Q 042957 116 KSNEWTRCAPLS-VPRYDFACTVCDNKIYVAGGKSNLF-------------------------------SAKGTASAEVY 163 (371)
Q Consensus 116 ~~~~W~~~~~~~-~~r~~~~~~~~~~~lyv~GG~~~~~-------------------------------~~~~~~~~~~y 163 (371)
.+++|+++++++ .+|..|++++++++||++||.+... ....++++++|
T Consensus 94 ~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 94 KTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp TTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred CCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 999999999988 8899999999999999999985310 00246899999
Q ss_pred eCCCCceEeCCCCCCCc-eeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEEC--CCCceeeccccccCCC-CC
Q 042957 164 HPELDQWTPLPNMSTLR-YKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDT--QAGKWDLVARMWQLDI-PP 239 (371)
Q Consensus 164 d~~t~~W~~~~~~p~~~-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~--~t~~W~~~~~~~~~~~-~~ 239 (371)
|+.+++|+.++++|.++ ..+++++++++|||+||...... ..+.+++||+ ++++|+.+..++.++. ..
T Consensus 174 d~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~--------~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 174 DPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGL--------RTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp ETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTE--------ECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred eCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCc--------ccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 99999999999999765 44888999999999999865432 4578899986 9999999998876653 24
Q ss_pred CeEEEECCEEEEEcCCCCC------------------ccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCc
Q 042957 240 NQIVEVDNRLFSSGDCLKA------------------WKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPI 301 (371)
Q Consensus 240 ~~~~~~~~~iyv~GG~~~~------------------~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~ 301 (371)
+++++++++||++||.... ...++++||+++++|+.+ ++++.+
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~-----~~~p~~-------------- 306 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS-----GELSQG-------------- 306 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE-----EECSSC--------------
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC-----CCCCCC--------------
Confidence 5688999999999996321 125799999999999999 777655
Q ss_pred eeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccccccccccCcccc
Q 042957 302 QRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIVE 354 (371)
Q Consensus 302 ~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p~ 354 (371)
|..|+++.++++|||+||.+..+ ..+.+|+.++.+++ +|..+.+.|.
T Consensus 307 -r~~~~~~~~~~~i~v~GG~~~~~---~~~~~v~~l~~~~~--~~~~~~~~~~ 353 (357)
T 2uvk_A 307 -RAYGVSLPWNNSLLIIGGETAGG---KAVTDSVLITVKDN--KVTVQNLEHH 353 (357)
T ss_dssp -CBSSEEEEETTEEEEEEEECGGG---CEEEEEEEEEC-CC--SCEEEC----
T ss_pred -cccceeEEeCCEEEEEeeeCCCC---CEeeeEEEEEEcCc--EeEeeecccc
Confidence 99999999999999999987653 35789999999998 9999988884
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=305.31 Aligned_cols=252 Identities=21% Similarity=0.322 Sum_probs=213.3
Q ss_pred CceEEEEeeecCCCCCCCccccceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCC
Q 042957 17 SGHLILASFCLREPGPRSNISNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDES 96 (371)
Q Consensus 17 ~~~~i~~g~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 96 (371)
..++|++|....+........+++++||+.+++|..++++| .+|..|++++++++|||+||.....
T Consensus 46 ~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~~~~~lyv~GG~~~~~--------- 111 (315)
T 4asc_A 46 NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP-----SPRCLFGLGEALNSIYVVGGREIKD--------- 111 (315)
T ss_dssp CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS-----SCEESCEEEEETTEEEEECCEESST---------
T ss_pred CEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC-----cchhceeEEEECCEEEEEeCCcCCC---------
Confidence 34455555543333444556677999999999999999887 5689999999999999999975211
Q ss_pred CccccccccccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCC
Q 042957 97 DDFVDAYDKVLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNM 176 (371)
Q Consensus 97 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~ 176 (371)
.....+++++||+.+++|++++++|.+|..|+++.++++||++||... .....+++++||+.+++|++++++
T Consensus 112 ------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~~~~W~~~~~~ 183 (315)
T 4asc_A 112 ------GERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGS--DRKCLNKMCVYDPKKFEWKELAPM 183 (315)
T ss_dssp ------TCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCT--TSCBCCCEEEEETTTTEEEECCCC
T ss_pred ------CCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCC--CCcccceEEEEeCCCCeEEECCCC
Confidence 235688999999999999999999999999999999999999999853 445688999999999999999999
Q ss_pred CCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCC
Q 042957 177 STLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCL 256 (371)
Q Consensus 177 p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~ 256 (371)
|.+|..+++++++++|||+||..... ..+++++||+++++|+.+.++|.++.. ++++.++++||++||..
T Consensus 184 p~~r~~~~~~~~~~~iyv~GG~~~~~---------~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~l~v~GG~~ 253 (315)
T 4asc_A 184 QTARSLFGATVHDGRIIVAAGVTDTG---------LTSSAEVYSITDNKWAPFEAFPQERSS-LSLVSLVGTLYAIGGFA 253 (315)
T ss_dssp SSCCBSCEEEEETTEEEEEEEECSSS---------EEEEEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEEEEEE
T ss_pred CCchhceEEEEECCEEEEEeccCCCC---------ccceEEEEECCCCeEEECCCCCCcccc-eeEEEECCEEEEECCcc
Confidence 99999999999999999999987654 567999999999999999999888764 67888999999999974
Q ss_pred C----------CccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEccee
Q 042957 257 K----------AWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYR 322 (371)
Q Consensus 257 ~----------~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~ 322 (371)
. ...+++++||+++++|+.+ .+. +|..++++.++++||++....
T Consensus 254 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~-----------------~r~~~~~~~~~~~l~v~~~~~ 307 (315)
T 4asc_A 254 TLETESGELVPTELNDIWRYNEEEKKWEGV-----LRE-----------------IAYAAGATFLPVRLNVLRLTK 307 (315)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTTTEEEEE-----ESC-----------------SSCCSSCEEEEEEECGGGSEE
T ss_pred ccCcCCccccccccCcEEEecCCCChhhhh-----ccC-----------------CcCccceEEeCCEEEEEEehh
Confidence 3 2347899999999999998 433 388899999999999987643
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5e-40 Score=301.61 Aligned_cols=246 Identities=24% Similarity=0.410 Sum_probs=207.1
Q ss_pred ccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEE
Q 042957 63 HVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKI 142 (371)
Q Consensus 63 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~l 142 (371)
.+|..|+++.++++||++||.. ....+++++||+.+++|+.++++|.+|..|+++.++++|
T Consensus 13 ~~~~~~~~~~~~~~i~v~GG~~-------------------~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l 73 (308)
T 1zgk_A 13 LVPRGSHAPKVGRLIYTAGGYF-------------------RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLL 73 (308)
T ss_dssp --------CCCCCCEEEECCBS-------------------SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEE
T ss_pred eeeCCccccCCCCEEEEEeCcC-------------------CCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEE
Confidence 4588899999999999999972 134788999999999999999999999999999999999
Q ss_pred EEEcCCCCC-CCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEEC
Q 042957 143 YVAGGKSNL-FSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDT 221 (371)
Q Consensus 143 yv~GG~~~~-~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~ 221 (371)
|++||.... ......+++++||+.+++|++++++|.+|..+++++++++|||+||..... ..+++++||+
T Consensus 74 yv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---------~~~~~~~yd~ 144 (308)
T 1zgk_A 74 YAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCI---------HHNSVERYEP 144 (308)
T ss_dssp EEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTE---------ECCCEEEEET
T ss_pred EEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCc---------ccccEEEECC
Confidence 999998310 023456889999999999999999999999999999999999999987643 5688999999
Q ss_pred CCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCC-ccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCC
Q 042957 222 QAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKA-WKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPP 300 (371)
Q Consensus 222 ~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p 300 (371)
.+++|+.+.++|.++.. +++++++++||++||.... ..+++++||+.+++|+.+ ++++.+
T Consensus 145 ~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-----~~~p~~------------- 205 (308)
T 1zgk_A 145 ERDEWHLVAPMLTRRIG-VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMI-----TAMNTI------------- 205 (308)
T ss_dssp TTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEC-----CCCSSC-------------
T ss_pred CCCeEeECCCCCccccc-eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC-----CCCCCc-------------
Confidence 99999999999888764 6788899999999998543 367899999999999999 777654
Q ss_pred ceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccccccccccCccccccccccccceeeE
Q 042957 301 IQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIVEEGEKELCSHCCVV 367 (371)
Q Consensus 301 ~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ 367 (371)
|..|+++.++++|||+||.... ....+++.||++++ +|+.++.|| .+++.|++++
T Consensus 206 --r~~~~~~~~~~~iyv~GG~~~~----~~~~~v~~yd~~~~--~W~~~~~~p----~~r~~~~~~~ 260 (308)
T 1zgk_A 206 --RSGAGVCVLHNCIYAAGGYDGQ----DQLNSVERYDVETE--TWTFVAPMK----HRRSALGITV 260 (308)
T ss_dssp --CBSCEEEEETTEEEEECCBCSS----SBCCCEEEEETTTT--EEEECCCCS----SCCBSCEEEE
T ss_pred --cccceEEEECCEEEEEeCCCCC----CccceEEEEeCCCC--cEEECCCCC----CCccceEEEE
Confidence 9999999999999999998754 45789999999998 999999998 4666777765
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=295.75 Aligned_cols=227 Identities=26% Similarity=0.390 Sum_probs=198.4
Q ss_pred ccccceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEE
Q 042957 35 NISNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYN 114 (371)
Q Consensus 35 ~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 114 (371)
...+++++||+.+++|++++++| .+|..|++++++++|||+||.. ....++++|+||
T Consensus 74 ~~~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~~~~~iyv~GG~~------------------~~~~~~~~~~~d 130 (302)
T 2xn4_A 74 LRVRTVDSYDPVKDQWTSVANMR-----DRRSTLGAAVLNGLLYAVGGFD------------------GSTGLSSVEAYN 130 (302)
T ss_dssp SBCCCEEEEETTTTEEEEECCCS-----SCCBSCEEEEETTEEEEEEEEC------------------SSCEEEEEEEEE
T ss_pred ccccceEEECCCCCceeeCCCCC-----ccccceEEEEECCEEEEEcCCC------------------CCccCceEEEEe
Confidence 45688999999999999999887 5689999999999999999986 234578999999
Q ss_pred CCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEE
Q 042957 115 VKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHV 194 (371)
Q Consensus 115 ~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv 194 (371)
+.+++|++++++|.+|..|+++.++++||++||.+.. .....+++++||+.+++|+.++++|.+|..+++++++++|||
T Consensus 131 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 209 (302)
T 2xn4_A 131 IKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVA-SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYA 209 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT-TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred CCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCC-CCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEE
Confidence 9999999999999999999999999999999998642 223478899999999999999999999999999999999999
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCC-ccCeEEEEeCCCCce
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKA-WKGHIESYDGELNMW 273 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~yd~~~~~W 273 (371)
+||..... ..+++++||+++++|+.+..++.++. .++++.++++||++||.... ..+++++||+++++|
T Consensus 210 ~GG~~~~~---------~~~~~~~yd~~~~~W~~~~~~~~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 210 VGGHDGPL---------VRKSVEVYDPTTNAWRQVADMNMCRR-NAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp ECCBSSSS---------BCCCEEEEETTTTEEEEECCCSSCCB-SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ECCCCCCc---------ccceEEEEeCCCCCEeeCCCCCCccc-cCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 99987653 45789999999999999999988776 46788899999999997543 457899999999999
Q ss_pred EeecCcccc-cCCCCcccCCCCCCCCCCceeeeeeEeeeCCeE
Q 042957 274 DEVNGSCLQ-TLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHL 315 (371)
Q Consensus 274 ~~~~~~~~~-~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l 315 (371)
+.+ + .|+.+ |..|++++++++|
T Consensus 280 ~~~-----~~~~~~~---------------r~~~~~~~~~~~i 302 (302)
T 2xn4_A 280 TVV-----SSCMSTG---------------RSYAGVTVIDKRL 302 (302)
T ss_dssp EEC-----SSCCSSC---------------CBSCEEEEEEC--
T ss_pred EEC-----CcccCcc---------------cccceEEEecccC
Confidence 999 5 66554 9999999998875
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=3.9e-39 Score=301.61 Aligned_cols=265 Identities=16% Similarity=0.156 Sum_probs=208.1
Q ss_pred ccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC--CCeeeecCCCC-C
Q 042957 52 HVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK--SNEWTRCAPLS-V 128 (371)
Q Consensus 52 ~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~~~~~-~ 128 (371)
.+++|| .+|..|++++++++|||+||.. .+++|+||+. +++|++++++| .
T Consensus 2 ~l~~lP-----~~r~~~~~~~~~~~iyv~GG~~----------------------~~~~~~~d~~~~~~~W~~~~~~p~~ 54 (357)
T 2uvk_A 2 VLPETP-----VPFKSGTGAIDNDTVYIGLGSA----------------------GTAWYKLDTQAKDKKWTALAAFPGG 54 (357)
T ss_dssp CSCCCS-----SCCCSCEEEEETTEEEEECGGG----------------------TTCEEEEETTSSSCCEEECCCCTTC
T ss_pred CCCCCC-----ccccceEEEEECCEEEEEeCcC----------------------CCeEEEEccccCCCCeeECCCCCCC
Confidence 456666 4678889999999999999985 3479999998 49999999999 8
Q ss_pred CCCCeeEEEECCEEEEEcCC-C-CCCCCCCCceEEEEeCCCCceEeCCCCC-CCceeeEEEEECCEEEEEecccCCCCC-
Q 042957 129 PRYDFACTVCDNKIYVAGGK-S-NLFSAKGTASAEVYHPELDQWTPLPNMS-TLRYKCVGVTWQGKIHVVSGFAQRADS- 204 (371)
Q Consensus 129 ~r~~~~~~~~~~~lyv~GG~-~-~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~~~~~~~~~~~~~lyv~GG~~~~~~~- 204 (371)
+|..|++++++++||++||. . .......++++++||+.+++|+++++++ .+|..+++++.+++|||+||.......
T Consensus 55 ~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 134 (357)
T 2uvk_A 55 PRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNG 134 (357)
T ss_dssp CCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHH
T ss_pred cCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcc
Confidence 99999999999999999998 3 1113455789999999999999999988 899999989999999999997643100
Q ss_pred ------------------------CCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCC--
Q 042957 205 ------------------------DGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKA-- 258 (371)
Q Consensus 205 ------------------------~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-- 258 (371)
.....+...+++++||+.+++|+.+.++|.++...+++++++++||++||....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~ 214 (357)
T 2uvk_A 135 YFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGL 214 (357)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTE
T ss_pred cccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCc
Confidence 000000134789999999999999999887766557889999999999997432
Q ss_pred ccCeEEEEeC--CCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeeccc----------
Q 042957 259 WKGHIESYDG--ELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGE---------- 326 (371)
Q Consensus 259 ~~~~~~~yd~--~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~---------- 326 (371)
..+++++||+ ++++|+.+ ++++.+ ..|..|+++.++++|||+||....+.
T Consensus 215 ~~~~v~~~d~d~~~~~W~~~-----~~~~~~-------------~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~ 276 (357)
T 2uvk_A 215 RTDAVFELDFTGNNLKWNKL-----APVSSP-------------DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNY 276 (357)
T ss_dssp ECCCEEEEECC---CEEEEC-----CCSSTT-------------TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSS
T ss_pred ccCceEEEEecCCCCcEEec-----CCCCCC-------------cccccceEEEECCEEEEEcCccccCCccccccccee
Confidence 3568999986 99999999 666532 44778889999999999999865421
Q ss_pred ---ccceeeEEEEeecccccccccccCccccccccccccceeeE
Q 042957 327 ---LARTMSMVHIFDTAAKSDAWRSFEPIVEEGEKELCSHCCVV 367 (371)
Q Consensus 327 ---~~~~~~~v~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ 367 (371)
....+.++++||++++ +|+.++.|| .+++.|+|++
T Consensus 277 ~~~~~~~~~~~~~yd~~~~--~W~~~~~~p----~~r~~~~~~~ 314 (357)
T 2uvk_A 277 AHEGLKKSYSTDIHLWHNG--KWDKSGELS----QGRAYGVSLP 314 (357)
T ss_dssp TTTTCCCEECCEEEECC-----CEEEEECS----SCCBSSEEEE
T ss_pred ccccccceeeEEEEecCCC--ceeeCCCCC----CCcccceeEE
Confidence 0134578999999998 999999999 5677788765
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=289.94 Aligned_cols=231 Identities=20% Similarity=0.275 Sum_probs=203.1
Q ss_pred CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCC
Q 042957 74 GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFS 153 (371)
Q Consensus 74 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~ 153 (371)
.+.||++||.. . .+++++||+.+++|+.++++|.+|..|+++.++++||++||..
T Consensus 11 ~~~l~~~GG~~------------------~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~---- 65 (306)
T 3ii7_A 11 HDYRIALFGGS------------------Q---PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ---- 65 (306)
T ss_dssp CCEEEEEECCS------------------S---TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS----
T ss_pred cceEEEEeCCC------------------C---CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC----
Confidence 47899999985 1 6889999999999999999999999999999999999999986
Q ss_pred CCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccc
Q 042957 154 AKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMW 233 (371)
Q Consensus 154 ~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~ 233 (371)
....+++++||+.+++|+.++++|.+|..+++++++++|||+||...... ..+++++||+.+++|+.++++|
T Consensus 66 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--------~~~~~~~~d~~~~~W~~~~~~p 137 (306)
T 3ii7_A 66 LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNS--------ALYLFECYDTRTESWHTKPSML 137 (306)
T ss_dssp SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBS--------CCCCEEEEETTTTEEEEECCCS
T ss_pred CCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCc--------EeeeEEEEeCCCCceEeCCCCc
Confidence 34578999999999999999999999999999999999999999873322 5689999999999999999999
Q ss_pred cCCCCCCeEEEECCEEEEEcCCCCCc-----cCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeE
Q 042957 234 QLDIPPNQIVEVDNRLFSSGDCLKAW-----KGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTM 308 (371)
Q Consensus 234 ~~~~~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~ 308 (371)
.++.. ++++.++++||++||..... .+++++||+++++|+.+ ++++.+ |..|++
T Consensus 138 ~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~-----~~~p~~---------------r~~~~~ 196 (306)
T 3ii7_A 138 TQRCS-HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL-----CPMIEA---------------RKNHGL 196 (306)
T ss_dssp SCCBS-CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEE-----CCCSSC---------------CBSCEE
T ss_pred CCcce-eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEEC-----CCccch---------------hhcceE
Confidence 88764 67888999999999974332 67899999999999999 777654 999999
Q ss_pred eeeCCeEEEEcceeecccccceeeEEEEeecccccccccccCccccccccccccceeeEE
Q 042957 309 APIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIVEEGEKELCSHCCVVQ 368 (371)
Q Consensus 309 ~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~ 368 (371)
+.++++|||+||.... ....+++.||++++ +|+.++.+| .++..|+|++.
T Consensus 197 ~~~~~~i~v~GG~~~~----~~~~~~~~yd~~~~--~W~~~~~~p----~~r~~~~~~~~ 246 (306)
T 3ii7_A 197 VFVKDKIFAVGGQNGL----GGLDNVEYYDIKLN--EWKMVSPMP----WKGVTVKCAAV 246 (306)
T ss_dssp EEETTEEEEECCEETT----EEBCCEEEEETTTT--EEEECCCCS----CCBSCCEEEEE
T ss_pred EEECCEEEEEeCCCCC----CCCceEEEeeCCCC--cEEECCCCC----CCccceeEEEE
Confidence 9999999999998764 45789999999998 999999999 46667777653
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=6.3e-39 Score=295.59 Aligned_cols=230 Identities=20% Similarity=0.376 Sum_probs=200.9
Q ss_pred ccccceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEE
Q 042957 35 NISNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYN 114 (371)
Q Consensus 35 ~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 114 (371)
...+.+++||+.+++|.+++++| .+|..|++++++++|||+||.... .....+++|+||
T Consensus 75 ~~~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~~~~~iyv~GG~~~~----------------~~~~~~~~~~yd 133 (318)
T 2woz_A 75 PLQSYFFQLDNVSSEWVGLPPLP-----SARCLFGLGEVDDKIYVVAGKDLQ----------------TEASLDSVLCYD 133 (318)
T ss_dssp CCCBEEEEEETTTTEEEECSCBS-----SCBCSCEEEEETTEEEEEEEEBTT----------------TCCEEEEEEEEE
T ss_pred CccccEEEEeCCCCcEEECCCCC-----ccccccceEEECCEEEEEcCccCC----------------CCcccceEEEEe
Confidence 34566999999999999999887 568999999999999999998521 224578999999
Q ss_pred CCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEE
Q 042957 115 VKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHV 194 (371)
Q Consensus 115 ~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv 194 (371)
+.+++|++++++|.+|..|++++++++||++||... .....+++++||+.+++|++++++|.+|..+++++++++|||
T Consensus 134 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 211 (318)
T 2woz_A 134 PVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTD--DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVI 211 (318)
T ss_dssp TTTTEEEEECCCSSCEESCEEEEETTEEEEECCEES--SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred CCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCC--CCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEE
Confidence 999999999999999999999999999999999853 334578999999999999999999999999999999999999
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCC----------CccCeEE
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLK----------AWKGHIE 264 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~----------~~~~~~~ 264 (371)
+||..... ..+++++||+++++|+.+.++|.++.. ++++.++++||++||... ...++++
T Consensus 212 ~GG~~~~~---------~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~ 281 (318)
T 2woz_A 212 AGGVTEDG---------LSASVEAFDLKTNKWEVMTEFPQERSS-ISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIW 281 (318)
T ss_dssp EEEEETTE---------EEEEEEEEETTTCCEEECCCCSSCCBS-CEEEEETTEEEEECCBCCBC----CCBCCBCCCEE
T ss_pred EcCcCCCC---------ccceEEEEECCCCeEEECCCCCCcccc-eEEEEECCEEEEECCeeccCCCCceeccceeeeEE
Confidence 99987654 457899999999999999999888764 688899999999999743 2357899
Q ss_pred EEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEc
Q 042957 265 SYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLA 319 (371)
Q Consensus 265 ~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~G 319 (371)
+||+++++|+.+ . + .+|..|+++.++++|||+.
T Consensus 282 ~yd~~~~~W~~~-----~--~---------------~~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 282 KYEDDKKEWAGM-----L--K---------------EIRYASGASCLATRLNLFK 314 (318)
T ss_dssp EEETTTTEEEEE-----E--S---------------CCGGGTTCEEEEEEEEGGG
T ss_pred EEeCCCCEehhh-----c--c---------------cccccccceeeCCEEEEEE
Confidence 999999999998 2 2 3489999999999999874
No 14
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=287.09 Aligned_cols=236 Identities=20% Similarity=0.376 Sum_probs=205.3
Q ss_pred EECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCC
Q 042957 72 SLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNL 151 (371)
Q Consensus 72 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~ 151 (371)
..++.||++||... .....+++++||+.+++|+.++++|.+|..|+++..+++||++||...
T Consensus 12 ~~~~~i~~~GG~~~-----------------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~- 73 (301)
T 2vpj_A 12 GANEVLLVVGGFGS-----------------QQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDG- 73 (301)
T ss_dssp -CCEEEEEECCEET-----------------TTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS-
T ss_pred cCCCEEEEEeCccC-----------------CCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCC-
Confidence 46889999999431 234678999999999999999999999999999999999999999863
Q ss_pred CCCCCCceEEEEeCCCCc---eEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceee
Q 042957 152 FSAKGTASAEVYHPELDQ---WTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDL 228 (371)
Q Consensus 152 ~~~~~~~~~~~yd~~t~~---W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~ 228 (371)
....+++++||+.+++ |+.++++|.+|..++++.++++||++||..... ..+++++||+.+++|+.
T Consensus 74 --~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~---------~~~~~~~~d~~~~~W~~ 142 (301)
T 2vpj_A 74 --RSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR---------RHTSMERYDPNIDQWSM 142 (301)
T ss_dssp --SCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC---------BCCEEEEEETTTTEEEE
T ss_pred --CccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCc---------ccceEEEEcCCCCeEEE
Confidence 3467899999999999 999999999999999999999999999988654 46899999999999999
Q ss_pred ccccccCCCCCCeEEEECCEEEEEcCCCCC-ccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeee
Q 042957 229 VARMWQLDIPPNQIVEVDNRLFSSGDCLKA-WKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLT 307 (371)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~ 307 (371)
+++++.++.. +++++++++||++||.... ..+++++||+.+++|+.+ ++++.+ |..|+
T Consensus 143 ~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-----~~~p~~---------------r~~~~ 201 (301)
T 2vpj_A 143 LGDMQTAREG-AGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV-----TPMATK---------------RSGAG 201 (301)
T ss_dssp EEECSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE-----CCCSSC---------------CBSCE
T ss_pred CCCCCCCccc-ceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeC-----CCCCcc---------------cccce
Confidence 9999877764 6788899999999998543 467899999999999999 777654 99999
Q ss_pred EeeeCCeEEEEcceeecccccceeeEEEEeecccccccccccCccccccccccccceeeE
Q 042957 308 MAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIVEEGEKELCSHCCVV 367 (371)
Q Consensus 308 ~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ 367 (371)
++.++++|||+||.... ....++++||++++ +|+.++.+| .+++.|+|++
T Consensus 202 ~~~~~~~i~v~GG~~~~----~~~~~v~~yd~~~~--~W~~~~~~p----~~r~~~~~~~ 251 (301)
T 2vpj_A 202 VALLNDHIYVVGGFDGT----AHLSSVEAYNIRTD--SWTTVTSMT----TPRCYVGATV 251 (301)
T ss_dssp EEEETTEEEEECCBCSS----SBCCCEEEEETTTT--EEEEECCCS----SCCBSCEEEE
T ss_pred EEEECCEEEEEeCCCCC----cccceEEEEeCCCC--cEEECCCCC----CcccceeEEE
Confidence 99999999999998754 34789999999998 999999998 4666777765
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.3e-35 Score=298.41 Aligned_cols=264 Identities=11% Similarity=0.104 Sum_probs=206.3
Q ss_pred ccccceeEEeCCCCceeccC-CCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEE
Q 042957 35 NISNWLASYNPSNNTWSHVS-HIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVL 111 (371)
Q Consensus 35 ~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 111 (371)
...+++++||+.+++|..++ ++|....+.+|.+|+++++ +++|||+||.... ...++++|
T Consensus 409 ~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~-----------------~~~~~dv~ 471 (695)
T 2zwa_A 409 YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAP-----------------HQGLSDNW 471 (695)
T ss_dssp SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSST-----------------TCBCCCCE
T ss_pred CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCC-----------------CCccccEE
Confidence 45688999999999999998 6543333478999999999 9999999998622 23578999
Q ss_pred EEECCCCeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC---CCCCceeeEEEE
Q 042957 112 RYNVKSNEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN---MSTLRYKCVGVT 187 (371)
Q Consensus 112 ~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~---~p~~~~~~~~~~ 187 (371)
+||+.+++|+.++++|.+|..|+++++ +++||++||.+... ++++||+.+++|+.+++ +|.+|..+++++
T Consensus 472 ~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~------~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v 545 (695)
T 2zwa_A 472 IFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP------AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLE 545 (695)
T ss_dssp EEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC------SEEEEETTTTEEEECCCSSGGGGSCCBSCEEE
T ss_pred EEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC------CEEEEECCCCceEEccCCCCCCCcccceeEEE
Confidence 999999999999999999999999996 99999999987421 89999999999999986 899999998777
Q ss_pred EC---CEEEEEecccCCCCCCCCccccccCeeEEEECCCCc------eeeccccccCCCCCCeEEEEC-CEEEEEcCCCC
Q 042957 188 WQ---GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK------WDLVARMWQLDIPPNQIVEVD-NRLFSSGDCLK 257 (371)
Q Consensus 188 ~~---~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~------W~~~~~~~~~~~~~~~~~~~~-~~iyv~GG~~~ 257 (371)
++ ++|||+||....... ..+++++||+.+++ |+.+..+|...+..+++++++ ++||++||...
T Consensus 546 ~~~~~~~iyv~GG~~~~~~~-------~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~ 618 (695)
T 2zwa_A 546 FDPVSKQGIILGGGFMDQTT-------VSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSP 618 (695)
T ss_dssp EETTTTEEEEECCBCTTSSC-------BCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCS
T ss_pred EeCCCCEEEEECCcCCCCCe-------eeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccC
Confidence 76 899999998654311 56899999999999 888877643333456788888 99999999743
Q ss_pred C----ccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCC-eEEEEcceeecccccceee
Q 042957 258 A----WKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGT-HLYFLAGYRMAGELARTMS 332 (371)
Q Consensus 258 ~----~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~ 332 (371)
. ..+++++||+++++|+.+ .++.... .-|+..+.+|+++.+++ +|||+||...........+
T Consensus 619 ~~~~~~~~~v~~yd~~t~~W~~~------~~p~~~~-------~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n 685 (695)
T 2zwa_A 619 SGLFDRTNSIISLDPLSETLTSI------PISRRIW-------EDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTN 685 (695)
T ss_dssp SCCCCTTTSEEEEETTTTEEEEC------CCCHHHH-------HHSCCCCSSCEEECC---CEEEECCEEECTTSCEEEC
T ss_pred CCCCCCCCeEEEEECCCCeEEEe------ecccccc-------CCCCccceeeeEEEeCCCEEEEEeCCccCcCcccccc
Confidence 2 357899999999999965 2221100 00112467888888876 9999999765422224455
Q ss_pred EEEEeeccc
Q 042957 333 MVHIFDTAA 341 (371)
Q Consensus 333 ~v~~~d~~~ 341 (371)
.+|.+|+.+
T Consensus 686 ~i~~ldl~~ 694 (695)
T 2zwa_A 686 VGLKLIAIA 694 (695)
T ss_dssp CCEEEEECC
T ss_pred ceEEEEEEc
Confidence 778887764
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.5e-33 Score=285.23 Aligned_cols=233 Identities=15% Similarity=0.232 Sum_probs=192.0
Q ss_pred ccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecC-C-----CCCCCCCeeEE
Q 042957 63 HVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCA-P-----LSVPRYDFACT 136 (371)
Q Consensus 63 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~-----~~~~r~~~~~~ 136 (371)
..|+++ +++++++|||+||.. . ...+++++||+.+++|+.++ + +|.+|..|+++
T Consensus 387 ~rr~g~-~~~~~~~iyv~GG~~------------------~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~ 446 (695)
T 2zwa_A 387 NRKFGD-VDVAGNDVFYMGGSN------------------P-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFT 446 (695)
T ss_dssp CCBSCE-EEECSSCEEEECCBS------------------S-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEE
T ss_pred CCceeE-EEEECCEEEEECCCC------------------C-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEE
Confidence 345554 445899999999986 2 45788999999999999987 5 78899999999
Q ss_pred EE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-CCEEEEEecccCCCCCCCCcccccc
Q 042957 137 VC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-QGKIHVVSGFAQRADSDGSVHFTER 213 (371)
Q Consensus 137 ~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~ 213 (371)
++ +++||++||... ....++++++||+.+++|+.++++|.+|..|+++++ +++|||+||.....
T Consensus 447 ~~~~~~~lyv~GG~~~--~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----------- 513 (695)
T 2zwa_A 447 TISRNNQLLLIGGRKA--PHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----------- 513 (695)
T ss_dssp EETTTTEEEEECCBSS--TTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-----------
T ss_pred EEccCCEEEEEcCCCC--CCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-----------
Confidence 99 999999999875 233678999999999999999999999999999986 99999999986531
Q ss_pred CeeEEEECCCCceeeccc---cccCCCCCCeEEEEC---CEEEEEcCCCC---CccCeEEEEeCCCCc------eEeecC
Q 042957 214 SSAEVYDTQAGKWDLVAR---MWQLDIPPNQIVEVD---NRLFSSGDCLK---AWKGHIESYDGELNM------WDEVNG 278 (371)
Q Consensus 214 ~~v~~yd~~t~~W~~~~~---~~~~~~~~~~~~~~~---~~iyv~GG~~~---~~~~~~~~yd~~~~~------W~~~~~ 278 (371)
++++||+.+++|+.+.. +|.++.. +++++++ ++||++||... ...+++++||+.+++ |+.+
T Consensus 514 -~v~~yd~~t~~W~~~~~~g~~p~~r~~-~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~-- 589 (695)
T 2zwa_A 514 -AMLLYNVTEEIFKDVTPKDEFFQNSLV-SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKK-- 589 (695)
T ss_dssp -SEEEEETTTTEEEECCCSSGGGGSCCB-SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE--
T ss_pred -CEEEEECCCCceEEccCCCCCCCcccc-eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEc--
Confidence 79999999999999986 6777654 5556656 89999999843 346889999999999 8888
Q ss_pred cccccCCCCcccCCCCCCCCCCceeeeeeEeeeC-CeEEEEcceeecccccceeeEEEEeecccccccccccCccc
Q 042957 279 SCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIG-THLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIV 353 (371)
Q Consensus 279 ~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p 353 (371)
.+++ |.+|.+|+++.++ ++|||+||....+. .....++++||++++ +|+.+ .+|
T Consensus 590 ---~~~p--------------~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~--~W~~~-~~p 644 (695)
T 2zwa_A 590 ---LQHP--------------LFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSE--TLTSI-PIS 644 (695)
T ss_dssp ---EECG--------------GGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTT--EEEEC-CCC
T ss_pred ---CCCC--------------CCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCC--eEEEe-ecc
Confidence 4442 3469999999999 99999999864321 135789999999998 99965 444
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=3.2e-34 Score=289.19 Aligned_cols=276 Identities=15% Similarity=0.098 Sum_probs=207.3
Q ss_pred ccceeEEeCCCCceeccCCCCcccccccccceEEEE-ECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 37 SNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVS-LGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 37 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
.+.+++||+.+++|..++.++.. +.++++++++ .+++||++||.. ..++++||+
T Consensus 218 ~~~~~~yd~~t~~w~~~~~~~~~---~~~~~~~~~~~~~g~lyv~GG~~----------------------~~~v~~yd~ 272 (656)
T 1k3i_A 218 ITLTSSWDPSTGIVSDRTVTVTK---HDMFCPGISMDGNGQIVVTGGND----------------------AKKTSLYDS 272 (656)
T ss_dssp EEEEEEECTTTCCBCCCEEEECS---CCCSSCEEEECTTSCEEEECSSS----------------------TTCEEEEEG
T ss_pred eEEEEEEeCCCCcEEeCcccCCC---CCCccccccCCCCCCEEEeCCCC----------------------CCceEEecC
Confidence 45799999999999999877642 2234445555 589999999975 237999999
Q ss_pred CCCeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC-----CCCCCCceeeEEEEEC
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL-----PNMSTLRYKCVGVTWQ 189 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~-----~~~p~~~~~~~~~~~~ 189 (371)
.+++|+++++|+.+|..|+++++ +++||++||... .....+++++||+.+++|+.+ .+|+..+.. +++..+
T Consensus 273 ~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~--~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~ 349 (656)
T 1k3i_A 273 SSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWS--GGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSD 349 (656)
T ss_dssp GGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCC--SSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTT
T ss_pred cCCceeECCCCCccccccceEEecCCeEEEEeCccc--CCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecC
Confidence 99999999999999999999999 999999999532 334678999999999999997 445555543 445679
Q ss_pred CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccc-c------CCCCCCeEEE---ECCEEEEEcCCCC--
Q 042957 190 GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMW-Q------LDIPPNQIVE---VDNRLFSSGDCLK-- 257 (371)
Q Consensus 190 ~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~-~------~~~~~~~~~~---~~~~iyv~GG~~~-- 257 (371)
+++|++||.++..... ...+.++.||++++.|....... . .+.. +.+++ .+++||++||...
T Consensus 350 ~~iyv~Gg~~g~~~~~-----~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~-~~av~~~~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQA-----GPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC-GNAVMYDAVKGKILTFGGSPDYQ 423 (656)
T ss_dssp CSCCEEECGGGCEEEC-----CSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT-CEEEEEETTTTEEEEECCBSSSS
T ss_pred CceEEEECCCCcEEEe-----cCccceeeeecCCcceeecCCccccccccCCCCCC-CceEeccCCCCeEEEEeCCCCCC
Confidence 9999999986532100 03478999999999987543222 1 1122 23332 4899999999632
Q ss_pred --CccC---eEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeee-CCeEEEEcceeeccc--ccc
Q 042957 258 --AWKG---HIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPI-GTHLYFLAGYRMAGE--LAR 329 (371)
Q Consensus 258 --~~~~---~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~--~~~ 329 (371)
...+ .+++||+++++|+.+. ...|+.+ |..|+++.+ +++|||+||...... ...
T Consensus 424 ~~~~~~~~~~v~~yd~~~~~W~~~~---~~~mp~~---------------R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~ 485 (656)
T 1k3i_A 424 DSDATTNAHIITLGEPGTSPNTVFA---SNGLYFA---------------RTFHTSVVLPDGSTFITGGQRRGIPFEDST 485 (656)
T ss_dssp SSBCCCCEEEEECCSTTSCCEEEEC---TTCCSSC---------------CBSCEEEECTTSCEEEECCBSBCCTTCCCS
T ss_pred CCCcCCcceEEEcCCCCCCCeeEEc---cCCCCCC---------------cccCCeEECCCCCEEEECCcccCcCcCCCC
Confidence 1223 7999999999999982 0266544 999998888 999999999754210 124
Q ss_pred eeeEEEEeecccccccccccCccccccccccccceeeEEec
Q 042957 330 TMSMVHIFDTAAKSDAWRSFEPIVEEGEKELCSHCCVVQLS 370 (371)
Q Consensus 330 ~~~~v~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~~~ 370 (371)
...++++||++++ +|+.++.|| .++..|+|.+.||
T Consensus 486 ~~~~v~~ydp~t~--~W~~~~~~~----~~R~~hs~a~ll~ 520 (656)
T 1k3i_A 486 PVFTPEIYVPEQD--TFYKQNPNS----IVRVYHSISLLLP 520 (656)
T ss_dssp BCCCCEEEEGGGT--EEEECCCCS----SCCCTTEEEEECT
T ss_pred cccceEEEcCCCC--ceeecCCCC----CccccccHhhcCC
Confidence 5789999999998 999999998 5788888777654
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=8.1e-31 Score=264.35 Aligned_cols=274 Identities=13% Similarity=0.148 Sum_probs=198.2
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
.+.+|||.+++|..++++| |..++++++ +++||++||....... ........+++||+.
T Consensus 167 ~~~~~dp~~~~W~~~~~~P-------~~~~~~av~~~~g~l~v~GG~~~~~~~------------~~~~~~~~~~~yd~~ 227 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLP-------IVPAAAAIEPTSGRVLMWSSYRNDAFG------------GSPGGITLTSSWDPS 227 (656)
T ss_dssp CCCCCCTTSCEEEEEEECS-------SCCSEEEEETTTTEEEEEEECCCTTTC------------SCCCSEEEEEEECTT
T ss_pred ccccCCCCCCeeeeeccCC-------CCceeEEEEecCCEEEEEecccccccc------------cCCCCeEEEEEEeCC
Confidence 3678999999999998887 344566666 8999999998532100 011234579999999
Q ss_pred CCeeeecCCCCCCCCCee--EE-EECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-CCEE
Q 042957 117 SNEWTRCAPLSVPRYDFA--CT-VCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-QGKI 192 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~--~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~l 192 (371)
+++|++++.++.+|..++ ++ ..+++||++||... .++++||+.+++|+++++||.+|..++++++ +++|
T Consensus 228 t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~i 300 (656)
T 1k3i_A 228 TGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRV 300 (656)
T ss_dssp TCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCE
T ss_pred CCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-------CceEEecCcCCceeECCCCCccccccceEEecCCeE
Confidence 999999998888876654 33 35899999999863 2799999999999999999999999998988 9999
Q ss_pred EEEecccCCCCCCCCccccccCeeEEEECCCCceeecc-----ccccCCCCCCeEEEECCEEEEEcCCCCC-----ccCe
Q 042957 193 HVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVA-----RMWQLDIPPNQIVEVDNRLFSSGDCLKA-----WKGH 262 (371)
Q Consensus 193 yv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~-----~~~~~~~~~~~~~~~~~~iyv~GG~~~~-----~~~~ 262 (371)
||+||...... ..+++++||+.+++|+.++ +++..+ .++++..++++|++||.... ..++
T Consensus 301 yv~GG~~~~~~--------~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~--~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~ 370 (656)
T 1k3i_A 301 FTIGGSWSGGV--------FEKNGEVYSPSSKTWTSLPNAKVNPMLTAD--KQGLYRSDNHAWLFGWKKGSVFQAGPSTA 370 (656)
T ss_dssp EEECCCCCSSS--------CCCCEEEEETTTTEEEEETTSCSGGGCCCC--TTGGGTTTCSCCEEECGGGCEEECCSSSE
T ss_pred EEEeCcccCCc--------ccccceEeCCCCCcceeCCCcccccccccc--ccceeecCCceEEEECCCCcEEEecCccc
Confidence 99999533222 4578999999999999983 343332 23555679999999987542 3468
Q ss_pred EEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEe---eeCCeEEEEcceeeccc--ccceeeEEEEe
Q 042957 263 IESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMA---PIGTHLYFLAGYRMAGE--LARTMSMVHIF 337 (371)
Q Consensus 263 ~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~---~~~~~l~v~GG~~~~~~--~~~~~~~v~~~ 337 (371)
+++||++++.|.... ...+.. ...+| .+..++++ ..+++||++||...... .......+++|
T Consensus 371 v~~yd~~~~~w~~~~----~~~~~~--------~~~~~-~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~y 437 (656)
T 1k3i_A 371 MNWYYTSGSGDVKSA----GKRQSN--------RGVAP-DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLG 437 (656)
T ss_dssp EEEEECSTTCEEEEE----EECEET--------TEECC-CCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECC
T ss_pred eeeeecCCcceeecC----Cccccc--------cccCC-CCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcC
Confidence 999999999998652 111100 00001 12334444 35899999999753211 11223489999
Q ss_pred ecccccccccccC--ccccccccccccceeeE
Q 042957 338 DTAAKSDAWRSFE--PIVEEGEKELCSHCCVV 367 (371)
Q Consensus 338 d~~~~~~~W~~~~--~~p~~~~~~~~~~~~~~ 367 (371)
|++++ +|..+. .|| .+++.|++++
T Consensus 438 d~~~~--~W~~~~~~~mp----~~R~~~~~~~ 463 (656)
T 1k3i_A 438 EPGTS--PNTVFASNGLY----FARTFHTSVV 463 (656)
T ss_dssp STTSC--CEEEECTTCCS----SCCBSCEEEE
T ss_pred CCCCC--CeeEEccCCCC----CCcccCCeEE
Confidence 99998 999986 888 4666677654
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.45 E-value=9.4e-05 Score=67.28 Aligned_cols=189 Identities=13% Similarity=-0.008 Sum_probs=111.9
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKS 117 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 117 (371)
..+..||+.+++....-.......+.....+.++..++++|+.... .+.+.++|+.+
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~-----------------------~~~v~viD~~t 73 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN-----------------------SHVIFAIDINT 73 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG-----------------------GTEEEEEETTT
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC-----------------------CCEEEEEECcc
Confidence 6789999999887542100000000112234677789999999643 46799999998
Q ss_pred Cee-eecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCC----ceeeEEEEECCE
Q 042957 118 NEW-TRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTL----RYKCVGVTWQGK 191 (371)
Q Consensus 118 ~~W-~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~----~~~~~~~~~~~~ 191 (371)
.+- ..++... .-..++. .++++|+.... ...+.++|+.+.+-...-++... ..-..++..+++
T Consensus 74 ~~~~~~i~~~~---~p~~i~~~~~g~lyv~~~~--------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~ 142 (328)
T 3dsm_A 74 FKEVGRITGFT---SPRYIHFLSDEKAYVTQIW--------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKY 142 (328)
T ss_dssp CCEEEEEECCS---SEEEEEEEETTEEEEEEBS--------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTE
T ss_pred cEEEEEcCCCC---CCcEEEEeCCCeEEEEECC--------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCE
Confidence 775 3343222 2233444 68899998643 25799999998865432111110 022233447899
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCC-Cc-----cCeEE
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLK-AW-----KGHIE 264 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~-~~-----~~~~~ 264 (371)
||+..- . ..+.+.++|+++++....-.... .+ ..++. -++++|+...... .. ...++
T Consensus 143 lyv~~~-~------------~~~~v~viD~~t~~~~~~i~~g~--~p-~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 143 VYVNCW-S------------YQNRILKIDTETDKVVDELTIGI--QP-TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp EEEEEC-T------------TCCEEEEEETTTTEEEEEEECSS--CB-CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEE
T ss_pred EEEEcC-C------------CCCEEEEEECCCCeEEEEEEcCC--Cc-cceEEcCCCCEEEEECCCccCCccccCCceEE
Confidence 999852 0 12579999999987654332221 11 23333 3688888764321 00 25799
Q ss_pred EEeCCCCceEee
Q 042957 265 SYDGELNMWDEV 276 (371)
Q Consensus 265 ~yd~~~~~W~~~ 276 (371)
++|+++.+....
T Consensus 207 ~id~~t~~v~~~ 218 (328)
T 3dsm_A 207 RIDAETFTVEKQ 218 (328)
T ss_dssp EEETTTTEEEEE
T ss_pred EEECCCCeEEEE
Confidence 999998876543
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.43 E-value=0.00012 Score=66.59 Aligned_cols=239 Identities=10% Similarity=-0.050 Sum_probs=132.5
Q ss_pred cceeEEeCCCCce-eccCCCCcccccccccceEEEE-ECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTW-SHVSHIPDLLENHVLKGFSIVS-LGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W-~~~~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+..+|+.+.+- .+++... ..+.++. .++++|+.... ...+.++|+
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~--------~p~~i~~~~~g~lyv~~~~-----------------------~~~v~~iD~ 112 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFT--------SPRYIHFLSDEKAYVTQIW-----------------------DYRIFIINP 112 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCS--------SEEEEEEEETTEEEEEEBS-----------------------CSEEEEEET
T ss_pred CEEEEEECcccEEEEEcCCCC--------CCcEEEEeCCCeEEEEECC-----------------------CCeEEEEEC
Confidence 5689999998775 3343222 1225555 67899998643 357899999
Q ss_pred CCCeeeecCCCCC----CCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE-EECC
Q 042957 116 KSNEWTRCAPLSV----PRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV-TWQG 190 (371)
Q Consensus 116 ~~~~W~~~~~~~~----~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~ 190 (371)
.+.+-...-+... ...-..++..+++||+..-. ....+.++|+.+++....-+. +..-..++ .-++
T Consensus 113 ~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-------~~~~v~viD~~t~~~~~~i~~--g~~p~~i~~~~dG 183 (328)
T 3dsm_A 113 KTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-------YQNRILKIDTETDKVVDELTI--GIQPTSLVMDKYN 183 (328)
T ss_dssp TTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT-------TCCEEEEEETTTTEEEEEEEC--SSCBCCCEECTTS
T ss_pred CCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC-------CCCEEEEEECCCCeEEEEEEc--CCCccceEEcCCC
Confidence 9887543211111 00223444478999998421 135799999999876442211 11111222 3468
Q ss_pred EEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeC
Q 042957 191 KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDG 268 (371)
Q Consensus 191 ~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~ 268 (371)
++|+..........- ......+.++|+++.+....-.++... ....++.. ++.||+..+ .+++||+
T Consensus 184 ~l~v~~~~~~~~~~~----~~~~~~v~~id~~t~~v~~~~~~~~g~-~p~~la~~~d~~~lyv~~~-------~v~~~d~ 251 (328)
T 3dsm_A 184 KMWTITDGGYEGSPY----GYEAPSLYRIDAETFTVEKQFKFKLGD-WPSEVQLNGTRDTLYWINN-------DIWRMPV 251 (328)
T ss_dssp EEEEEBCCBCTTCSS----CBCCCEEEEEETTTTEEEEEEECCTTC-CCEEEEECTTSCEEEEESS-------SEEEEET
T ss_pred CEEEEECCCccCCcc----ccCCceEEEEECCCCeEEEEEecCCCC-CceeEEEecCCCEEEEEcc-------EEEEEEC
Confidence 888876322111000 000257999999998866443333222 23356655 567888754 5999999
Q ss_pred CCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEee--eCCeEEEEcceeecccccceeeEEEEeecccccccc
Q 042957 269 ELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAP--IGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAW 346 (371)
Q Consensus 269 ~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W 346 (371)
++.+.... .-++.. ...-.+++. .+++||+....+. .....|.+||++ .+..|
T Consensus 252 ~t~~~~~~-----~~~~~~--------------~~~p~gi~vdp~~g~lyva~~~~y-----~~~~~V~v~d~~-g~~~~ 306 (328)
T 3dsm_A 252 EADRVPVR-----PFLEFR--------------DTKYYGLTVNPNNGEVYVADAIDY-----QQQGIVYRYSPQ-GKLID 306 (328)
T ss_dssp TCSSCCSS-----CSBCCC--------------SSCEEEEEECTTTCCEEEEECTTS-----SSEEEEEEECTT-CCEEE
T ss_pred CCCceeee-----eeecCC--------------CCceEEEEEcCCCCeEEEEccccc-----ccCCEEEEECCC-CCEEE
Confidence 98765322 111100 022234444 3679999862110 124589999998 42334
Q ss_pred c-ccCccc
Q 042957 347 R-SFEPIV 353 (371)
Q Consensus 347 ~-~~~~~p 353 (371)
+ .++..|
T Consensus 307 ~i~~G~~P 314 (328)
T 3dsm_A 307 EFYVGIIP 314 (328)
T ss_dssp EEEEEESE
T ss_pred EEEeccCc
Confidence 3 235555
No 21
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.28 E-value=0.00018 Score=62.15 Aligned_cols=159 Identities=9% Similarity=-0.020 Sum_probs=107.7
Q ss_pred eEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcC
Q 042957 68 FSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGG 147 (371)
Q Consensus 68 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG 147 (371)
+++...++.+|+-.|.. ..+.+.++|+.+++=.+--+++......+++..+++||+...
T Consensus 24 qGL~~~~~~LyestG~~---------------------g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGET---------------------GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp EEEEEETTEEEEEECCT---------------------TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES
T ss_pred ccEEEECCEEEEECCCC---------------------CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe
Confidence 37888899999998874 246789999999987665556655566778888999999965
Q ss_pred CCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCcee
Q 042957 148 KSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWD 227 (371)
Q Consensus 148 ~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~ 227 (371)
.. +.+++||..+.+-. ..++.+..+.+++.-+++||+.-| + +.+..+|+++.+-.
T Consensus 83 ~~--------~~v~v~D~~tl~~~--~ti~~~~~Gwglt~dg~~L~vSdg-s--------------~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 83 RN--------HEGFVYDLATLTPR--ARFRYPGEGWALTSDDSHLYMSDG-T--------------AVIRKLDPDTLQQV 137 (243)
T ss_dssp SS--------SEEEEEETTTTEEE--EEEECSSCCCEEEECSSCEEEECS-S--------------SEEEEECTTTCCEE
T ss_pred eC--------CEEEEEECCcCcEE--EEEeCCCCceEEeeCCCEEEEECC-C--------------CeEEEEeCCCCeEE
Confidence 43 68999999886533 233333355566666777888765 1 47899999997654
Q ss_pred eccccc---cCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 228 LVARMW---QLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 228 ~~~~~~---~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
..-... .+......+...+++||+--- ..+.|.+.|+++.+-...
T Consensus 138 ~~I~V~~~g~~~~~lNeLe~~~G~lyanvw----~s~~I~vIDp~tG~V~~~ 185 (243)
T 3mbr_X 138 GSIKVTAGGRPLDNLNELEWVNGELLANVW----LTSRIARIDPASGKVVAW 185 (243)
T ss_dssp EEEECEETTEECCCEEEEEEETTEEEEEET----TTTEEEEECTTTCBEEEE
T ss_pred EEEEEccCCcccccceeeEEeCCEEEEEEC----CCCeEEEEECCCCCEEEE
Confidence 332221 111111245567899886422 235799999999875544
No 22
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.06 E-value=0.0048 Score=56.64 Aligned_cols=221 Identities=16% Similarity=0.163 Sum_probs=124.7
Q ss_pred cceeEEeCCCCc--eeccCCCCcccc--cccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEE
Q 042957 38 NWLASYNPSNNT--WSHVSHIPDLLE--NHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRY 113 (371)
Q Consensus 38 ~~~~~yd~~~~~--W~~~~~~~~~~~--~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 113 (371)
..+++||+.+++ |+.-........ .........+..++.||+... ...++.|
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------------------------~g~l~a~ 118 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------------------------KAQVYAL 118 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------------------------TSEEEEE
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------------------------CCEEEEE
Confidence 368999998766 765432110000 011123345666888988643 2468999
Q ss_pred ECCCCe--eeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCc--eEeCCCCCC--CceeeEEEE
Q 042957 114 NVKSNE--WTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQ--WTPLPNMST--LRYKCVGVT 187 (371)
Q Consensus 114 d~~~~~--W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~--~~~~~~~~~ 187 (371)
|..+++ |+.-..- ......+..++.||+.... ..++.||..+.+ |+.-...+. .+.....+.
T Consensus 119 d~~tG~~~W~~~~~~---~~~~~p~~~~~~v~v~~~~---------g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 119 NTSDGTVAWQTKVAG---EALSRPVVSDGLVLIHTSN---------GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp ETTTCCEEEEEECSS---CCCSCCEEETTEEEEECTT---------SEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred ECCCCCEEEEEeCCC---ceEcCCEEECCEEEEEcCC---------CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 988764 7553221 1122334568888875432 368999998765 876433221 112233345
Q ss_pred ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCC-------CCCCeEEEECCEEEEEcCCCCC
Q 042957 188 WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLD-------IPPNQIVEVDNRLFSSGDCLKA 258 (371)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~-------~~~~~~~~~~~~iyv~GG~~~~ 258 (371)
.++.||+.. . ...+..+|+++++ |+.-...+... ......+..++.+|+.+. .
T Consensus 187 ~~~~v~~g~-~--------------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~-- 248 (376)
T 3q7m_A 187 AFGAAVVGG-D--------------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N-- 248 (376)
T ss_dssp ETTEEEECC-T--------------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T--
T ss_pred ECCEEEEEc-C--------------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C--
Confidence 688877632 1 1468999998764 66543222110 011234566888888652 1
Q ss_pred ccCeEEEEeCCCCc--eEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEE
Q 042957 259 WKGHIESYDGELNM--WDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHI 336 (371)
Q Consensus 259 ~~~~~~~yd~~~~~--W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~ 336 (371)
..+.++|+++.+ |+.- .. .....+..++.||+.... ..++.
T Consensus 249 --g~l~~~d~~tG~~~w~~~-------~~------------------~~~~~~~~~~~l~~~~~~----------g~l~~ 291 (376)
T 3q7m_A 249 --GNLTALDLRSGQIMWKRE-------LG------------------SVNDFIVDGNRIYLVDQN----------DRVMA 291 (376)
T ss_dssp --SCEEEEETTTCCEEEEEC-------CC------------------CEEEEEEETTEEEEEETT----------CCEEE
T ss_pred --cEEEEEECCCCcEEeecc-------CC------------------CCCCceEECCEEEEEcCC----------CeEEE
Confidence 249999998763 6543 11 112345568888886421 25788
Q ss_pred eeccccccccccc
Q 042957 337 FDTAAKSDAWRSF 349 (371)
Q Consensus 337 ~d~~~~~~~W~~~ 349 (371)
+|+++.+..|+.-
T Consensus 292 ~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 292 LTIDGGVTLWTQS 304 (376)
T ss_dssp EETTTCCEEEEEC
T ss_pred EECCCCcEEEeec
Confidence 9988776678754
No 23
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.06 E-value=0.00035 Score=60.92 Aligned_cols=159 Identities=11% Similarity=-0.049 Sum_probs=103.9
Q ss_pred eEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcC
Q 042957 68 FSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGG 147 (371)
Q Consensus 68 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG 147 (371)
.++...++.+|+-.|.. ..+.+.++|+.+++=..--+++......+++..+++||+...
T Consensus 46 qGL~~~~~~LyestG~~---------------------g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLN---------------------GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp EEEEEETTEEEEEEEET---------------------TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES
T ss_pred ceEEEECCEEEEECCCC---------------------CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe
Confidence 46666789999998874 245789999999876554445443445567888999999955
Q ss_pred CCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCcee
Q 042957 148 KSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWD 227 (371)
Q Consensus 148 ~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~ 227 (371)
.+ +.+++||+++.+-.. .++.+-.+.+++.-++.||+.-| . +.+..+|+++.+-.
T Consensus 105 ~~--------~~v~v~D~~t~~~~~--ti~~~~eG~glt~dg~~L~~SdG-s--------------~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 105 KN--------GLGFVWNIRNLRQVR--SFNYDGEGWGLTHNDQYLIMSDG-T--------------PVLRFLDPESLTPV 159 (262)
T ss_dssp SS--------SEEEEEETTTCCEEE--EEECSSCCCCEEECSSCEEECCS-S--------------SEEEEECTTTCSEE
T ss_pred eC--------CEEEEEECccCcEEE--EEECCCCceEEecCCCEEEEECC-C--------------CeEEEEcCCCCeEE
Confidence 43 579999998875432 22223344555555667887764 1 47899999987654
Q ss_pred ecccccc---CCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 228 LVARMWQ---LDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 228 ~~~~~~~---~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
..-.... +......+...+++||+--- ..+.|.+.|+++.+-...
T Consensus 160 ~~I~V~~~g~~~~~lNELe~~~G~lyan~w----~~~~I~vIDp~tG~V~~~ 207 (262)
T 3nol_A 160 RTITVTAHGEELPELNELEWVDGEIFANVW----QTNKIVRIDPETGKVTGI 207 (262)
T ss_dssp EEEECEETTEECCCEEEEEEETTEEEEEET----TSSEEEEECTTTCBEEEE
T ss_pred EEEEeccCCccccccceeEEECCEEEEEEc----cCCeEEEEECCCCcEEEE
Confidence 3322221 11111135566899886421 235799999999876554
No 24
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.02 E-value=0.0039 Score=57.31 Aligned_cols=212 Identities=15% Similarity=0.136 Sum_probs=122.6
Q ss_pred cceeEEeCCCCc--eeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNT--WSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~--W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..++++|+.+++ |+.-..-. .....+..++.||+... ...++.||+
T Consensus 113 g~l~a~d~~tG~~~W~~~~~~~--------~~~~p~~~~~~v~v~~~------------------------~g~l~~~d~ 160 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKVAGE--------ALSRPVVSDGLVLIHTS------------------------NGQLQALNE 160 (376)
T ss_dssp SEEEEEETTTCCEEEEEECSSC--------CCSCCEEETTEEEEECT------------------------TSEEEEEET
T ss_pred CEEEEEECCCCCEEEEEeCCCc--------eEcCCEEECCEEEEEcC------------------------CCeEEEEEC
Confidence 458999998876 76533211 11123455788887543 246899998
Q ss_pred CCCe--eeecCCCCC--CCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCCCCCCc--------e
Q 042957 116 KSNE--WTRCAPLSV--PRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPNMSTLR--------Y 181 (371)
Q Consensus 116 ~~~~--W~~~~~~~~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~--------~ 181 (371)
.+++ |+.-...+. .+.....+..++.||+. ..+ ..+..+|+.+. .|+.-...+... .
T Consensus 161 ~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g-~~~--------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~ 231 (376)
T 3q7m_A 161 ADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVG-GDN--------GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDV 231 (376)
T ss_dssp TTCCEEEEEECCC-----CCCCCCEEETTEEEEC-CTT--------TEEEEEETTTCCEEEEEECCC-----------CC
T ss_pred CCCcEEEEEeCCCCceeecCCCCcEEECCEEEEE-cCC--------CEEEEEECCCCcEEEEEecccCCCCccccccccc
Confidence 8775 866433221 12234445567887763 221 36889998765 476543322211 1
Q ss_pred eeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCCCCCCeEEEECCEEEEEcCCCCCc
Q 042957 182 KCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAW 259 (371)
Q Consensus 182 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~ 259 (371)
....+..++.||+.+. ...+.++|+++.+ |+... .. ....+..++.||+....
T Consensus 232 ~~~p~~~~~~v~~~~~---------------~g~l~~~d~~tG~~~w~~~~--~~----~~~~~~~~~~l~~~~~~---- 286 (376)
T 3q7m_A 232 DTTPVVVNGVVFALAY---------------NGNLTALDLRSGQIMWKREL--GS----VNDFIVDGNRIYLVDQN---- 286 (376)
T ss_dssp CCCCEEETTEEEEECT---------------TSCEEEEETTTCCEEEEECC--CC----EEEEEEETTEEEEEETT----
T ss_pred CCCcEEECCEEEEEec---------------CcEEEEEECCCCcEEeeccC--CC----CCCceEECCEEEEEcCC----
Confidence 1233466888887651 2468899998774 65432 11 12456678899987532
Q ss_pred cCeEEEEeCCCCc--eEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEe
Q 042957 260 KGHIESYDGELNM--WDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIF 337 (371)
Q Consensus 260 ~~~~~~yd~~~~~--W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~ 337 (371)
..+++||+++.+ |+.- .+.. +...+.+..+++||+... ...++++
T Consensus 287 -g~l~~~d~~tG~~~w~~~------~~~~----------------~~~~~~~~~~~~l~v~~~----------~g~l~~~ 333 (376)
T 3q7m_A 287 -DRVMALTIDGGVTLWTQS------DLLH----------------RLLTSPVLYNGNLVVGDS----------EGYLHWI 333 (376)
T ss_dssp -CCEEEEETTTCCEEEEEC------TTTT----------------SCCCCCEEETTEEEEECT----------TSEEEEE
T ss_pred -CeEEEEECCCCcEEEeec------ccCC----------------CcccCCEEECCEEEEEeC----------CCeEEEE
Confidence 249999998765 6543 1111 122234456788887532 1257888
Q ss_pred ecccccccccc
Q 042957 338 DTAAKSDAWRS 348 (371)
Q Consensus 338 d~~~~~~~W~~ 348 (371)
|+++.+..|+.
T Consensus 334 d~~tG~~~~~~ 344 (376)
T 3q7m_A 334 NVEDGRFVAQQ 344 (376)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCcEEEEE
Confidence 88877556754
No 25
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.88 E-value=0.0021 Score=55.41 Aligned_cols=116 Identities=13% Similarity=0.090 Sum_probs=85.1
Q ss_pred CCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccc
Q 042957 131 YDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHF 210 (371)
Q Consensus 131 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 210 (371)
...++...++.||...|..+ .+.+.++|+++++-...-+++....+..++..+++||+.....
T Consensus 22 ftqGL~~~~~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~----------- 84 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN----------- 84 (243)
T ss_dssp CEEEEEEETTEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----------
T ss_pred ccccEEEECCEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----------
Confidence 34578888999999988753 4689999999998776666776666777788899999987433
Q ss_pred cccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceE
Q 042957 211 TERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWD 274 (371)
Q Consensus 211 ~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~ 274 (371)
+.+.+||+++.+-.. .++.+.. +.+++.-+++||+.-| .+ .+.++|+++.+-.
T Consensus 85 ---~~v~v~D~~tl~~~~--ti~~~~~-Gwglt~dg~~L~vSdg-s~----~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 85 ---HEGFVYDLATLTPRA--RFRYPGE-GWALTSDDSHLYMSDG-TA----VIRKLDPDTLQQV 137 (243)
T ss_dssp ---SEEEEEETTTTEEEE--EEECSSC-CCEEEECSSCEEEECS-SS----EEEEECTTTCCEE
T ss_pred ---CEEEEEECCcCcEEE--EEeCCCC-ceEEeeCCCEEEEECC-CC----eEEEEeCCCCeEE
Confidence 578999998875433 3332322 3467766788999866 22 5999999986543
No 26
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.88 E-value=0.00089 Score=58.44 Aligned_cols=156 Identities=8% Similarity=-0.062 Sum_probs=102.1
Q ss_pred eEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcC
Q 042957 68 FSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGG 147 (371)
Q Consensus 68 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG 147 (371)
.++...++.||+..|.. ..+.++|+.+++=.+-- ++......+++..+++||+...
T Consensus 58 qGL~~~~~~Ly~stG~~-----------------------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw 113 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ-----------------------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTW 113 (268)
T ss_dssp EEEEEETTEEEEEETTT-----------------------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEES
T ss_pred ceEEEECCEEEEEcCCC-----------------------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEc
Confidence 46777789999999974 33889999988754333 4443344567888999999955
Q ss_pred CCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCcee
Q 042957 148 KSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWD 227 (371)
Q Consensus 148 ~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~ 227 (371)
.+ +.+++||+++.+-.. .++.+-.+.+++.-+++||+..| . +.+..+|+++.+-.
T Consensus 114 ~~--------~~v~V~D~~Tl~~~~--ti~~~~eGwGLt~Dg~~L~vSdG-s--------------~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 114 TE--------GLLFTWSGMPPQRER--TTRYSGEGWGLCYWNGKLVRSDG-G--------------TMLTFHEPDGFALV 168 (268)
T ss_dssp SS--------CEEEEEETTTTEEEE--EEECSSCCCCEEEETTEEEEECS-S--------------SEEEEECTTTCCEE
T ss_pred cC--------CEEEEEECCcCcEEE--EEeCCCceeEEecCCCEEEEECC-C--------------CEEEEEcCCCCeEE
Confidence 43 679999998875432 22223344566677888998874 1 57899999997654
Q ss_pred ecccccc---CCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 228 LVARMWQ---LDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 228 ~~~~~~~---~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
..-.... +......+...+++||+-- -..+.|.+.|+++.+-...
T Consensus 169 ~~I~V~~~g~~v~~lNeLe~~dG~lyanv----w~s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 169 GAVQVKLRGQPVELINELECANGVIYANI----WHSSDVLEIDPATGTVVGV 216 (268)
T ss_dssp EEEECEETTEECCCEEEEEEETTEEEEEE----TTCSEEEEECTTTCBEEEE
T ss_pred EEEEeCCCCcccccccccEEeCCEEEEEE----CCCCeEEEEeCCCCcEEEE
Confidence 3322211 1111123556688988632 1235799999999875543
No 27
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.73 E-value=0.0011 Score=61.11 Aligned_cols=176 Identities=13% Similarity=0.061 Sum_probs=96.2
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-C-CEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-G-DSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..+..||..+++-...-... ..-.+++.. + ..||+.++. ...+.++|.
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~-----------------------d~~i~v~d~ 61 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG-------SNPMGAVISPDGTKVYVANAH-----------------------SNDVSIIDT 61 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-------SSEEEEEECTTSSEEEEEEGG-----------------------GTEEEEEET
T ss_pred CEEEEEECCCCeEEEEeecC-------CCcceEEECCCCCEEEEECCC-----------------------CCeEEEEEC
Confidence 45889999887644322111 112244443 3 357777655 357889999
Q ss_pred CCCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-CC-E
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-QG-K 191 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~-~ 191 (371)
.+++....-.... .-..++.. +..||+.+..+ ..+.+||..+++....-... .....++.. ++ .
T Consensus 62 ~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~--------~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~ 129 (391)
T 1l0q_A 62 ATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS--------STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKK 129 (391)
T ss_dssp TTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTT--------TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSE
T ss_pred CCCeEEEEEECCC--CccceEECCCCCEEEEEECCC--------CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCE
Confidence 8887544322222 11222222 44566665443 46999999987654332211 112233332 33 5
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCC
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGE 269 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~ 269 (371)
||+.++.. ..+.+||+.+.+......... . ...++.. ++.||+.++..+ .+.+||+.
T Consensus 130 l~~~~~~~--------------~~v~~~d~~~~~~~~~~~~~~--~-~~~~~~~~dg~~l~~~~~~~~----~v~~~d~~ 188 (391)
T 1l0q_A 130 LYVTNNGD--------------KTVSVINTVTKAVINTVSVGR--S-PKGIAVTPDGTKVYVANFDSM----SISVIDTV 188 (391)
T ss_dssp EEEEETTT--------------TEEEEEETTTTEEEEEEECCS--S-EEEEEECTTSSEEEEEETTTT----EEEEEETT
T ss_pred EEEEeCCC--------------CEEEEEECCCCcEEEEEecCC--C-cceEEECCCCCEEEEEeCCCC----EEEEEECC
Confidence 77776422 578999999887654432211 1 1233333 346767765443 59999998
Q ss_pred CCceEee
Q 042957 270 LNMWDEV 276 (371)
Q Consensus 270 ~~~W~~~ 276 (371)
+.+....
T Consensus 189 ~~~~~~~ 195 (391)
T 1l0q_A 189 TNSVIDT 195 (391)
T ss_dssp TTEEEEE
T ss_pred CCeEEEE
Confidence 8765443
No 28
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.73 E-value=0.0088 Score=52.43 Aligned_cols=158 Identities=11% Similarity=-0.005 Sum_probs=98.8
Q ss_pred eEEEEEC-CEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEc
Q 042957 68 FSIVSLG-DSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAG 146 (371)
Q Consensus 68 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~G 146 (371)
++++..+ +.+|+..|.. ..+.+.++|+.+++=...-+++......+++..+++||+..
T Consensus 24 ~Gl~~~~dg~Lyvstg~~---------------------~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t 82 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY---------------------GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVV 82 (266)
T ss_dssp EEEEECSTTEEEEEECST---------------------TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE
T ss_pred ccEEEeCCCeEEEECCCC---------------------CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEE
Confidence 5677765 7999987742 24679999999988654433443334456777899999995
Q ss_pred CCCCCCCCCCCceEEEEeCCCCceEeCCCCCCC-ceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc
Q 042957 147 GKSNLFSAKGTASAEVYHPELDQWTPLPNMSTL-RYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK 225 (371)
Q Consensus 147 G~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~ 225 (371)
-. .+.+.+||..+.+- +..++.+ -.+..++.-++++|+..| .+.+..+|+++.+
T Consensus 83 ~~--------~~~v~viD~~t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g---------------s~~l~viD~~t~~ 137 (266)
T 2iwa_A 83 WL--------KNIGFIYDRRTLSN--IKNFTHQMKDGWGLATDGKILYGSDG---------------TSILYEIDPHTFK 137 (266)
T ss_dssp TT--------CSEEEEEETTTTEE--EEEEECCSSSCCEEEECSSSEEEECS---------------SSEEEEECTTTCC
T ss_pred ec--------CCEEEEEECCCCcE--EEEEECCCCCeEEEEECCCEEEEECC---------------CCeEEEEECCCCc
Confidence 43 35799999987643 2222222 233344444567887653 1578999999876
Q ss_pred eeeccccc---cCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEe
Q 042957 226 WDLVARMW---QLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 226 W~~~~~~~---~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~ 275 (371)
-...-... .+......+...+++||+--.. .+.+.+.|+++.+-..
T Consensus 138 v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~----~~~V~vID~~tg~V~~ 186 (266)
T 2iwa_A 138 LIKKHNVKYNGHRVIRLNELEYINGEVWANIWQ----TDCIARISAKDGTLLG 186 (266)
T ss_dssp EEEEEECEETTEECCCEEEEEEETTEEEEEETT----SSEEEEEETTTCCEEE
T ss_pred EEEEEEECCCCcccccceeEEEECCEEEEecCC----CCeEEEEECCCCcEEE
Confidence 43322221 1111122455568888876322 3479999999876433
No 29
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.0035 Score=56.93 Aligned_cols=179 Identities=7% Similarity=0.025 Sum_probs=95.2
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE-C--CEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-G--DSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
.+..||....++..+..+.. |...-.+++.. + +.+++.|+.+ ..+..+|.
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~~l~s~~~d-----------------------g~v~iwd~ 86 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTG----HEGPVWRVDWAHPKFGTILASCSYD-----------------------GKVLIWKE 86 (379)
T ss_dssp CEEEEEEETTEEEEEEEECC----CSSCEEEEEECCGGGCSEEEEEETT-----------------------SCEEEEEE
T ss_pred cEEEEecCCCcceeeeEecC----CCCcEEEEEeCCCCCCCEEEEeccC-----------------------CEEEEEEc
Confidence 47788877666655443331 22222344443 2 5666676653 45788888
Q ss_pred CCCeeeecCCCCCCCCCeeEEEE--C--CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe---CCCCCCCceeeEEEEE
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVC--D--NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP---LPNMSTLRYKCVGVTW 188 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~---~~~~p~~~~~~~~~~~ 188 (371)
.+++|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+..-.. +....... ..++..
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~v--~~~~~~ 156 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--------GKVSVVEFKENGTTSPIIIDAHAIGV--NSASWA 156 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEECCTTSCCCEEEEECCTTCE--EEEEEC
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC--------CcEEEEecCCCCceeeEEecCCCCce--EEEEEc
Confidence 88887666544332222222222 3 5677777765 368888887663211 11111111 112222
Q ss_pred --------------CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCCCCCCeEEEE-C---CE
Q 042957 189 --------------QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLDIPPNQIVEV-D---NR 248 (371)
Q Consensus 189 --------------~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~-~---~~ 248 (371)
++.+++.|+.+ ..+.+||+.+.. +..+..+.........++.. + ++
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~d--------------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~ 222 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGAD--------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 222 (379)
T ss_dssp CCC----------CTTCEEEEEETT--------------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred CccccccccccCCCCCCEEEEEeCC--------------CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC
Confidence 46677777644 367888876543 44443333211111233333 3 67
Q ss_pred EEEEcCCCCCccCeEEEEeCCCCc
Q 042957 249 LFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 249 iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+++.|+... .+.+||..+..
T Consensus 223 ~l~s~~~dg----~i~iwd~~~~~ 242 (379)
T 3jrp_A 223 YLASVSQDR----TCIIWTQDNEQ 242 (379)
T ss_dssp EEEEEETTS----CEEEEEESSTT
T ss_pred eEEEEeCCC----EEEEEeCCCCC
Confidence 788877655 38999988763
No 30
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.62 E-value=0.0042 Score=54.13 Aligned_cols=114 Identities=11% Similarity=-0.061 Sum_probs=80.4
Q ss_pred eeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccc
Q 042957 133 FACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTE 212 (371)
Q Consensus 133 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 212 (371)
.++...++.||+..|..+ .+.+.++|+++.+-...-+++.......++..+++||+.....
T Consensus 46 qGL~~~~~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~------------- 106 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN------------- 106 (262)
T ss_dssp EEEEEETTEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-------------
T ss_pred ceEEEECCEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-------------
Confidence 456666899999988643 3679999999998765555665555566778899999997533
Q ss_pred cCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceE
Q 042957 213 RSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWD 274 (371)
Q Consensus 213 ~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~ 274 (371)
+.+.+||+++.+-... ++.+.. +.+++.-+++||+.-| . +.++++|+++.+-.
T Consensus 107 -~~v~v~D~~t~~~~~t--i~~~~e-G~glt~dg~~L~~SdG-s----~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 107 -GLGFVWNIRNLRQVRS--FNYDGE-GWGLTHNDQYLIMSDG-T----PVLRFLDPESLTPV 159 (262)
T ss_dssp -SEEEEEETTTCCEEEE--EECSSC-CCCEEECSSCEEECCS-S----SEEEEECTTTCSEE
T ss_pred -CEEEEEECccCcEEEE--EECCCC-ceEEecCCCEEEEECC-C----CeEEEEcCCCCeEE
Confidence 5789999998764332 222222 3466666778888865 2 35999999986543
No 31
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.53 E-value=0.0014 Score=60.36 Aligned_cols=136 Identities=14% Similarity=0.119 Sum_probs=74.9
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE-C-CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC-D-NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
..+.++|..+++-...-.... .-.+++.. + ..||+.++.+ ..+.+||..+++....-.... .-..+
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~d--------~~i~v~d~~~~~~~~~~~~~~--~v~~~ 79 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVANAHS--------NDVSIIDTATNNVIATVPAGS--SPQGV 79 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEEGGG--------TEEEEEETTTTEEEEEEECSS--SEEEE
T ss_pred CEEEEEECCCCeEEEEeecCC--CcceEEECCCCCEEEEECCCC--------CeEEEEECCCCeEEEEEECCC--Cccce
Confidence 568889988776543221111 11222222 3 4677776654 468999998876544322222 21222
Q ss_pred EEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccC
Q 042957 186 VTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKG 261 (371)
Q Consensus 186 ~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~ 261 (371)
+.. +..||+.+... ..+.+||+.+++......... ....++.. ++.||+.++..+
T Consensus 80 ~~spdg~~l~~~~~~~--------------~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~---- 138 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMAS--------------STLSVIDTTSNTVAGTVKTGK---SPLGLALSPDGKKLYVTNNGDK---- 138 (391)
T ss_dssp EECTTSSEEEEEETTT--------------TEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEETTTT----
T ss_pred EECCCCCEEEEEECCC--------------CEEEEEECCCCeEEEEEeCCC---CcceEEECCCCCEEEEEeCCCC----
Confidence 222 34566665322 478999999886544322211 11233333 335767765443
Q ss_pred eEEEEeCCCCceEee
Q 042957 262 HIESYDGELNMWDEV 276 (371)
Q Consensus 262 ~~~~yd~~~~~W~~~ 276 (371)
.+.+||+.+.+....
T Consensus 139 ~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 139 TVSVINTVTKAVINT 153 (391)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEECCCCcEEEE
Confidence 599999988766554
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.52 E-value=0.0096 Score=52.94 Aligned_cols=139 Identities=9% Similarity=-0.032 Sum_probs=72.5
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCe-eEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDF-ACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
..+..||..+.+......+....... .++. -+++.++.|+.+ ..+.+||..+.+....-....... ..+
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~v~~~d~~~~~~~~~~~~~~~~i-~~~ 189 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD--------GNIAVWDLHNQTLVRQFQGHTDGA-SCI 189 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTEEEEEECCCSSCE-EEE
T ss_pred CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC--------CcEEEEeCCCCceeeeeecccCce-EEE
Confidence 56888898887654333222222222 2222 256667777664 358899998775433211111111 122
Q ss_pred EE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCCccCeE
Q 042957 186 VT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGHI 263 (371)
Q Consensus 186 ~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~ 263 (371)
+. -+++.++.++.. ..+.+||+.+.+-......... ...++. -+++++++|+... .+
T Consensus 190 ~~~~~~~~l~~~~~d--------------g~i~~~d~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~~~----~i 248 (337)
T 1gxr_A 190 DISNDGTKLWTGGLD--------------NTVRSWDLREGRQLQQHDFTSQ---IFSLGYCPTGEWLAVGMESS----NV 248 (337)
T ss_dssp EECTTSSEEEEEETT--------------SEEEEEETTTTEEEEEEECSSC---EEEEEECTTSSEEEEEETTS----CE
T ss_pred EECCCCCEEEEEecC--------------CcEEEEECCCCceEeeecCCCc---eEEEEECCCCCEEEEEcCCC----cE
Confidence 22 255566666532 4788999988754333221111 112333 2566777766544 49
Q ss_pred EEEeCCCCceEee
Q 042957 264 ESYDGELNMWDEV 276 (371)
Q Consensus 264 ~~yd~~~~~W~~~ 276 (371)
.+||..+..-..+
T Consensus 249 ~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 249 EVLHVNKPDKYQL 261 (337)
T ss_dssp EEEETTSSCEEEE
T ss_pred EEEECCCCCeEEE
Confidence 9999988764443
No 33
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.49 E-value=0.03 Score=50.15 Aligned_cols=183 Identities=10% Similarity=-0.032 Sum_probs=94.2
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-C-CEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-G-DSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..++.+|+.+.+-...-.... ..+.++.. + +.+|+.+.. ...++.+|+
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~v~~~~-----------------------~~~v~~~d~ 118 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDL-------KPFGATINNTTQTLWFGNTV-----------------------NSAVTAIDA 118 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESS-------CCCSEEEETTTTEEEEEETT-----------------------TTEEEEEET
T ss_pred ccEEEEcCCCCeEEEEEecCC-------CcceEEECCCCCEEEEEecC-----------------------CCEEEEEeC
Confidence 568899998876433322221 11233333 3 458877654 247899999
Q ss_pred CCCeeeecCCCCCC--------CCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 116 KSNEWTRCAPLSVP--------RYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 116 ~~~~W~~~~~~~~~--------r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
.+.+-...-..... ..-..++.. ++.+|+.+... ...+++||+.+.+-...-+..........
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-------ESVIWVVDGGNIKLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-------SCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-------CceEEEEcCCCCceEEEecCCCCccceEE
Confidence 88764322111111 111223332 45677775321 24699999987654332221111111122
Q ss_pred EEEC-CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccC--CCCCCeEEEE--CCEEEEEcCCCCCcc
Q 042957 186 VTWQ-GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQL--DIPPNQIVEV--DNRLFSSGDCLKAWK 260 (371)
Q Consensus 186 ~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~--~~~~~~~~~~--~~~iyv~GG~~~~~~ 260 (371)
..-+ +.||+... ...+.+||+.+.+-......... ......++.. ++.+|+.....
T Consensus 192 ~s~dg~~l~~~~~---------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---- 252 (353)
T 3vgz_A 192 LDSEGKRLYTTNA---------------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA---- 252 (353)
T ss_dssp EETTTTEEEEECT---------------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS----
T ss_pred ECCCCCEEEEEcC---------------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC----
Confidence 2223 45776542 14678899988764433222111 1111124443 45677765332
Q ss_pred CeEEEEeCCCCceEee
Q 042957 261 GHIESYDGELNMWDEV 276 (371)
Q Consensus 261 ~~~~~yd~~~~~W~~~ 276 (371)
+.+.+||+.+.+....
T Consensus 253 ~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 253 AEVLVVDTRNGNILAK 268 (353)
T ss_dssp SEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCcEEEE
Confidence 3699999988765443
No 34
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.47 E-value=0.018 Score=51.00 Aligned_cols=176 Identities=10% Similarity=0.077 Sum_probs=88.2
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKS 117 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 117 (371)
.+..||..+.+....-. .|...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 46 ~i~iw~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s~~~d-----------------------~~i~vwd~~~ 96 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTIS------GHKLGISDVAWSSDSNLLVSASDD-----------------------KTLKIWDVSS 96 (312)
T ss_dssp CEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEEEETT-----------------------SEEEEEETTT
T ss_pred eEEEEeCCCcccchhhc------cCCCceEEEEEcCCCCEEEEECCC-----------------------CEEEEEECCC
Confidence 47778887766543211 121222234443 45677777653 4678888877
Q ss_pred CeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee-EEE-EECCEEEEE
Q 042957 118 NEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC-VGV-TWQGKIHVV 195 (371)
Q Consensus 118 ~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~-~~~-~~~~~lyv~ 195 (371)
.+-...-.............-++.+++.|+.+ ..+.+||..+.+-... ++...... .++ .-++++++.
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD--------ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETT--------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEE
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC--------CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEE
Confidence 65322110001111111112256677777765 3588999887653322 11111111 112 225666777
Q ss_pred ecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCC-CeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 196 SGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPP-NQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 196 GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
|+.. ..+.+||+.+.+-.... ....... ..++.. +++.++.|+..+ .+.+||..+..-
T Consensus 167 ~~~d--------------~~i~~wd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~ 226 (312)
T 4ery_A 167 SSYD--------------GLCRIWDTASGQCLKTL--IDDDNPPVSFVKFSPNGKYILAATLDN----TLKLWDYSKGKC 226 (312)
T ss_dssp EETT--------------SCEEEEETTTCCEEEEE--CCSSCCCEEEEEECTTSSEEEEEETTT----EEEEEETTTTEE
T ss_pred EeCC--------------CcEEEEECCCCceeeEE--eccCCCceEEEEECCCCCEEEEEcCCC----eEEEEECCCCcE
Confidence 7543 46888999877543221 1111111 112222 456666666544 599999987653
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.47 E-value=0.047 Score=47.63 Aligned_cols=189 Identities=7% Similarity=0.023 Sum_probs=96.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..+.+||+....-..+....... .+...-..++.. ++.+|+..... ...+.+||.
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~-~~~~~p~~i~~~~~~g~l~v~~~~~----------------------~~~i~~~d~ 107 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRD-SQLLYPNRVAVVRNSGDIIVTERSP----------------------THQIQIYNQ 107 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSST-TCBSSEEEEEEETTTTEEEEEECGG----------------------GCEEEEECT
T ss_pred CEEEEECCCCcEEEEecccCCCc-ccccCceEEEEEcCCCeEEEEcCCC----------------------CCEEEEECC
Confidence 45888888754433333211000 011122355553 57899886421 246888986
Q ss_pred CCCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE-ECCEEE
Q 042957 116 KSNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT-WQGKIH 193 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~~ly 193 (371)
....-..+..... ..-..++. -++++|+..... ..+.+||+.......+........-..++. -+++||
T Consensus 108 ~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~--------~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 108 YGQFVRKFGATIL-QHPRGVTVDNKGRIIVVECKV--------MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp TSCEEEEECTTTC-SCEEEEEECTTSCEEEEETTT--------TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred CCcEEEEecCccC-CCceEEEEeCCCCEEEEECCC--------CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 5444333322111 11123333 267888875432 468889876554444321111111122232 357899
Q ss_pred EEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 194 VVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 194 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+..... ..+.+||+.......+...... ....+++.. +++||+.....+ ..+.+||+....
T Consensus 179 v~~~~~--------------~~i~~~~~~g~~~~~~~~~g~~-~~p~~i~~d~~G~l~v~~~~~~---~~i~~~~~~g~~ 240 (286)
T 1q7f_A 179 ISDNRA--------------HCVKVFNYEGQYLRQIGGEGIT-NYPIGVGINSNGEILIADNHNN---FNLTIFTQDGQL 240 (286)
T ss_dssp EEEGGG--------------TEEEEEETTCCEEEEESCTTTS-CSEEEEEECTTCCEEEEECSSS---CEEEEECTTSCE
T ss_pred EEECCC--------------CEEEEEcCCCCEEEEEccCCcc-CCCcEEEECCCCCEEEEeCCCC---EEEEEECCCCCE
Confidence 876422 5789999866544443221100 112234443 568888865432 159999987655
Q ss_pred eEee
Q 042957 273 WDEV 276 (371)
Q Consensus 273 W~~~ 276 (371)
-..+
T Consensus 241 ~~~~ 244 (286)
T 1q7f_A 241 ISAL 244 (286)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.40 E-value=0.0096 Score=53.92 Aligned_cols=182 Identities=10% Similarity=0.048 Sum_probs=90.7
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+..||..++++..+..+.. |...-.+++.. ++..++.|+.+ ..+..||..
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~~~~~d-----------------------g~i~vwd~~ 82 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKE----HNGQVTGVDWAPDSNRIVTCGTD-----------------------RNAYVWTLK 82 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEEC----CSSCEEEEEEETTTTEEEEEETT-----------------------SCEEEEEEE
T ss_pred CEEEEEeCCCCcEEeeeeecC----CCCcccEEEEeCCCCEEEEEcCC-----------------------CeEEEEECC
Confidence 458899998887655544431 22222344444 46666676653 457888888
Q ss_pred CCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCc-eEeCCCCCCC--ceeeEEEE-ECC
Q 042957 117 SNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQ-WTPLPNMSTL--RYKCVGVT-WQG 190 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~--~~~~~~~~-~~~ 190 (371)
+.++.....+.........+.+ +++.++.|+.+ ..+.+||..+.. |.....+..+ ..-..++. -++
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS--------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT--------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC--------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence 8876554332221222222222 56677777654 246677666543 3322221111 11112222 256
Q ss_pred EEEEEecccCCCCCCCCccccccCeeEEEECCCCc----------------eeeccccccCCCCCCeEEEE-CCEEEEEc
Q 042957 191 KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK----------------WDLVARMWQLDIPPNQIVEV-DNRLFSSG 253 (371)
Q Consensus 191 ~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~----------------W~~~~~~~~~~~~~~~~~~~-~~~iyv~G 253 (371)
++++.|+.. ..+.+||..... -+.+..+.........++.. +++.++.|
T Consensus 155 ~~l~~~~~d--------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 220 (372)
T 1k8k_C 155 VLLAAGSCD--------------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 220 (372)
T ss_dssp SEEEEEETT--------------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE
T ss_pred CEEEEEcCC--------------CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE
Confidence 666677543 467888864211 11111111111111123222 55566666
Q ss_pred CCCCCccCeEEEEeCCCCc
Q 042957 254 DCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 254 G~~~~~~~~~~~yd~~~~~ 272 (371)
+.++ .+.+||+.+.+
T Consensus 221 ~~d~----~i~i~d~~~~~ 235 (372)
T 1k8k_C 221 SHDS----TVCLADADKKM 235 (372)
T ss_dssp ETTT----EEEEEEGGGTT
T ss_pred eCCC----EEEEEECCCCc
Confidence 6444 59999998655
No 37
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.36 E-value=0.0028 Score=59.12 Aligned_cols=184 Identities=9% Similarity=0.025 Sum_probs=97.7
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKS 117 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 117 (371)
.++.+|+.+.++..+..++... ...+++.. ++.+++.++.+ ..+.++|+.+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~~~~~~~~-----------------------~~i~~~d~~~ 153 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGF-----QPKSVRFIDNTRLAIPLLED-----------------------EGMDVLDINS 153 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSS-----CBCCCEESSSSEEEEEBTTS-----------------------SSEEEEETTT
T ss_pred EEEEECCCCCcceEEEEEcCCC-----CceEEEEeCCCeEEEEeCCC-----------------------CeEEEEECCC
Confidence 6788888777666554433211 11133333 67788877652 4589999988
Q ss_pred CeeeecCCCC---CCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE--CC
Q 042957 118 NEWTRCAPLS---VPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW--QG 190 (371)
Q Consensus 118 ~~W~~~~~~~---~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~ 190 (371)
.+.....+.. ........+. -++++++.++.+ ..+.+||..+.+....-.... ..-..++.. +.
T Consensus 154 g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d--------~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 224 (433)
T 3bws_A 154 GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA--------NAVHVFDLKTLAYKATVDLTG-KWSKILLYDPIRD 224 (433)
T ss_dssp CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG--------TEEEEEETTTCCEEEEEECSS-SSEEEEEEETTTT
T ss_pred CeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC--------CEEEEEECCCceEEEEEcCCC-CCeeEEEEcCCCC
Confidence 8765543321 1111111222 268888887764 468999998765432211111 111222322 34
Q ss_pred EEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCC----ccCeEEE
Q 042957 191 KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKA----WKGHIES 265 (371)
Q Consensus 191 ~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~----~~~~~~~ 265 (371)
.+|+.++.. ..+.+||+.+.+....-... .. ...++.. +++.+++++.... ....+.+
T Consensus 225 ~l~~~~~~~--------------~~i~~~d~~~~~~~~~~~~~--~~-~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~ 287 (433)
T 3bws_A 225 LVYCSNWIS--------------EDISVIDRKTKLEIRKTDKI--GL-PRGLLLSKDGKELYIAQFSASNQESGGGRLGI 287 (433)
T ss_dssp EEEEEETTT--------------TEEEEEETTTTEEEEECCCC--SE-EEEEEECTTSSEEEEEEEESCTTCSCCEEEEE
T ss_pred EEEEEecCC--------------CcEEEEECCCCcEEEEecCC--CC-ceEEEEcCCCCEEEEEECCCCccccCCCeEEE
Confidence 576666432 47899999887654332221 11 1233332 4444444443111 1246999
Q ss_pred EeCCCCceEee
Q 042957 266 YDGELNMWDEV 276 (371)
Q Consensus 266 yd~~~~~W~~~ 276 (371)
||+.+.+-...
T Consensus 288 ~d~~~~~~~~~ 298 (433)
T 3bws_A 288 YSMDKEKLIDT 298 (433)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCcEEee
Confidence 99988754443
No 38
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.35 E-value=0.033 Score=52.17 Aligned_cols=138 Identities=11% Similarity=0.083 Sum_probs=73.0
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT 187 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 187 (371)
..+..||..+.+-... +...........+++..++.|+.+ ..+.+||..+.+-... +...........
T Consensus 259 g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~ 326 (445)
T 2ovr_B 259 FMVKVWDPETETCLHT--LQGHTNRVYSLQFDGIHVVSGSLD--------TSIRVWDVETGNCIHT--LTGHQSLTSGME 326 (445)
T ss_dssp SCEEEEEGGGTEEEEE--ECCCSSCEEEEEECSSEEEEEETT--------SCEEEEETTTCCEEEE--ECCCCSCEEEEE
T ss_pred CEEEEEECCCCcEeEE--ecCCCCceEEEEECCCEEEEEeCC--------CeEEEEECCCCCEEEE--EcCCcccEEEEE
Confidence 4577788766543221 111112223333477777777765 3588999887653322 111111112223
Q ss_pred ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEe
Q 042957 188 WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYD 267 (371)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd 267 (371)
.++.+++.|+.+ ..+.+||+.+.+-...-..+.........+..++.+++.|+.++ .+.+||
T Consensus 327 ~~~~~l~~~~~d--------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg----~v~iwd 388 (445)
T 2ovr_B 327 LKDNILVSGNAD--------------STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG----TVKLWD 388 (445)
T ss_dssp EETTEEEEEETT--------------SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS----EEEEEE
T ss_pred EeCCEEEEEeCC--------------CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCC----eEEEEE
Confidence 345555666533 46889999876533222111111111223445677777777554 499999
Q ss_pred CCCCceEe
Q 042957 268 GELNMWDE 275 (371)
Q Consensus 268 ~~~~~W~~ 275 (371)
+.+.+...
T Consensus 389 ~~~~~~~~ 396 (445)
T 2ovr_B 389 LKTGEFIR 396 (445)
T ss_dssp TTTCCEEE
T ss_pred CCCCceee
Confidence 99876543
No 39
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.34 E-value=0.045 Score=47.09 Aligned_cols=177 Identities=10% Similarity=0.007 Sum_probs=90.8
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+.+||+.+.....+..... ..-++++.. ++.+|+... . ..+++||+.
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~------~~p~~i~~~~~g~l~v~~~-~-----------------------~~i~~~d~~ 95 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGL------YQPQGLAVDGAGTVYVTDF-N-----------------------NRVVTLAAG 95 (270)
T ss_dssp CEEEEECC-----EECCCCSC------CSCCCEEECTTCCEEEEET-T-----------------------TEEEEECTT
T ss_pred CcEEEecCCCcccceEeeCCc------CCcceeEECCCCCEEEEcC-C-----------------------CEEEEEeCC
Confidence 458889987766444332110 112245554 467888753 2 458899988
Q ss_pred CCeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-CCEEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-QGKIHV 194 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv 194 (371)
......+..... ..-..++.. +++||+..... ..+.+++..+........... ..-..++.. +++||+
T Consensus 96 ~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~--------~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v 165 (270)
T 1rwi_B 96 SNNQTVLPFDGL-NYPEGLAVDTQGAVYVADRGN--------NRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYV 165 (270)
T ss_dssp CSCCEECCCCSC-SSEEEEEECTTCCEEEEEGGG--------TEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEE
T ss_pred CceEeeeecCCc-CCCcceEECCCCCEEEEECCC--------CEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEE
Confidence 766544432111 112233333 67888874332 468888776655443321111 111223332 577888
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
..... ..+.+||+.+..-...... .. ....+++.. ++.||+.....+ .+.+||+....-
T Consensus 166 ~~~~~--------------~~i~~~~~~~~~~~~~~~~-~~-~~p~~i~~d~~g~l~v~~~~~~----~v~~~~~~~~~~ 225 (270)
T 1rwi_B 166 TDTDN--------------NRVVKLEAESNNQVVLPFT-DI-TAPWGIAVDEAGTVYVTEHNTN----QVVKLLAGSTTS 225 (270)
T ss_dssp EEGGG--------------TEEEEECTTTCCEEECCCS-SC-CSEEEEEECTTCCEEEEETTTS----CEEEECTTCSCC
T ss_pred EECCC--------------CEEEEEecCCCceEeeccc-CC-CCceEEEECCCCCEEEEECCCC----cEEEEcCCCCcc
Confidence 76422 4788999887654332111 11 112244443 458888754333 499999977543
Q ss_pred E
Q 042957 274 D 274 (371)
Q Consensus 274 ~ 274 (371)
.
T Consensus 226 ~ 226 (270)
T 1rwi_B 226 T 226 (270)
T ss_dssp E
T ss_pred e
Confidence 3
No 40
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.30 E-value=0.03 Score=52.30 Aligned_cols=190 Identities=8% Similarity=-0.062 Sum_probs=101.0
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECC-EEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDN-KIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
..++.+|..+++...+...+. ...+.+. -++ +|++.+..+. ...++++|..+.+...+........ ...
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~~~~~~~l~~~~~~~~-~~~ 273 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLASGQIRQVTDGRSNNT-EPT 273 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTS------SCEEEEEETTTCCEEECCCCSSCEE-EEE
T ss_pred cEEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCC------CceEEEEECCCCCEEeCcCCCCccc-ceE
Confidence 579999999888766544322 1112222 244 4554554432 3579999999988777654332111 111
Q ss_pred EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCCccCeEE
Q 042957 186 VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 264 (371)
..-+++.+++++.... ...++.+|+.+..-..+.... . ....++. -+++.+++++... ....++
T Consensus 274 ~spdg~~l~~~s~~~g-----------~~~i~~~d~~~~~~~~l~~~~--~-~~~~~~~spdG~~l~~~~~~~-g~~~i~ 338 (415)
T 2hqs_A 274 WFPDSQNLAFTSDQAG-----------RPQVYKVNINGGAPQRITWEG--S-QNQDADVSSDGKFMVMVSSNG-GQQHIA 338 (415)
T ss_dssp ECTTSSEEEEEECTTS-----------SCEEEEEETTSSCCEECCCSS--S-EEEEEEECTTSSEEEEEEECS-SCEEEE
T ss_pred ECCCCCEEEEEECCCC-----------CcEEEEEECCCCCEEEEecCC--C-cccCeEECCCCCEEEEEECcC-CceEEE
Confidence 1225554444432211 147888999887654442211 1 1112222 2455444443321 123699
Q ss_pred EEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccccc
Q 042957 265 SYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSD 344 (371)
Q Consensus 265 ~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~ 344 (371)
++|+++.+...+. .-. ........-+++.+++++.+. ....++.||++.+
T Consensus 339 ~~d~~~~~~~~l~-----~~~-----------------~~~~~~~spdg~~l~~~s~~~------~~~~l~~~d~~g~-- 388 (415)
T 2hqs_A 339 KQDLATGGVQVLS-----STF-----------------LDETPSLAPNGTMVIYSSSQG------MGSVLNLVSTDGR-- 388 (415)
T ss_dssp EEETTTCCEEECC-----CSS-----------------SCEEEEECTTSSEEEEEEEET------TEEEEEEEETTSC--
T ss_pred EEECCCCCEEEec-----CCC-----------------CcCCeEEcCCCCEEEEEEcCC------CccEEEEEECCCC--
Confidence 9999998887662 111 111122233667666666532 1358899998866
Q ss_pred cccccCc
Q 042957 345 AWRSFEP 351 (371)
Q Consensus 345 ~W~~~~~ 351 (371)
..+.++.
T Consensus 389 ~~~~l~~ 395 (415)
T 2hqs_A 389 FKARLPA 395 (415)
T ss_dssp CEEECCC
T ss_pred cEEEeeC
Confidence 5555544
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.0085 Score=54.27 Aligned_cols=143 Identities=9% Similarity=0.032 Sum_probs=75.4
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE--C--CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC--D--NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~ 183 (371)
..+..||....++..+..+...........+ + +.+++.|+.+ ..+.+||..+.+|..+..+.......
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~v 104 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD--------GKVLIWKEENGRWSQIAVHAVHSASV 104 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC--------CEEEEEEcCCCceeEeeeecCCCcce
Confidence 3467777766666555443322222222222 2 6777777765 35888999998877665443222222
Q ss_pred -EEEEE-C--CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--------------
Q 042957 184 -VGVTW-Q--GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-------------- 245 (371)
Q Consensus 184 -~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-------------- 245 (371)
.++.. + +.+++.|+.. ..+.+||+.+..-.....+.........++..
T Consensus 105 ~~~~~~~~~~~~~l~~~~~d--------------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 170 (379)
T 3jrp_A 105 NSVQWAPHEYGPLLLVASSD--------------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTK 170 (379)
T ss_dssp EEEEECCGGGCSEEEEEETT--------------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------C
T ss_pred EEEEeCCCCCCCEEEEecCC--------------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCC
Confidence 22222 3 5566666533 47888998876432221111111111122222
Q ss_pred CCEEEEEcCCCCCccCeEEEEeCCCCc--eEee
Q 042957 246 DNRLFSSGDCLKAWKGHIESYDGELNM--WDEV 276 (371)
Q Consensus 246 ~~~iyv~GG~~~~~~~~~~~yd~~~~~--W~~~ 276 (371)
++.+++.|+... .+.+||+.+.. +..+
T Consensus 171 ~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~ 199 (379)
T 3jrp_A 171 ESRKFVTGGADN----LVKIWKYNSDAQTYVLE 199 (379)
T ss_dssp TTCEEEEEETTS----CEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCC----eEEEEEecCCCcceeeE
Confidence 367777776554 48888886543 5444
No 42
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.25 E-value=0.024 Score=49.39 Aligned_cols=112 Identities=4% Similarity=-0.141 Sum_probs=78.7
Q ss_pred eeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccc
Q 042957 133 FACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTE 212 (371)
Q Consensus 133 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 212 (371)
.++...++.||+..|..+ .+.++|+++.+-...- ++.......++..+++||+.....
T Consensus 58 qGL~~~~~~Ly~stG~~g--------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~------------- 115 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG--------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE------------- 115 (268)
T ss_dssp EEEEEETTEEEEEETTTT--------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-------------
T ss_pred ceEEEECCEEEEEcCCCC--------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-------------
Confidence 566677999999988752 3899999988654433 555545556677899999986532
Q ss_pred cCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEe
Q 042957 213 RSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 213 ~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~ 275 (371)
+.+.+||+++.+-... ++.+.. +.+++.-+++||+.-| .+ .+.++|+++.+-..
T Consensus 116 -~~v~V~D~~Tl~~~~t--i~~~~e-GwGLt~Dg~~L~vSdG-s~----~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 116 -GLLFTWSGMPPQRERT--TRYSGE-GWGLCYWNGKLVRSDG-GT----MLTFHEPDGFALVG 169 (268)
T ss_dssp -CEEEEEETTTTEEEEE--EECSSC-CCCEEEETTEEEEECS-SS----EEEEECTTTCCEEE
T ss_pred -CEEEEEECCcCcEEEE--EeCCCc-eeEEecCCCEEEEECC-CC----EEEEEcCCCCeEEE
Confidence 5789999998764432 222222 3467777889999875 22 59999999865443
No 43
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.22 E-value=0.051 Score=48.68 Aligned_cols=137 Identities=11% Similarity=0.079 Sum_probs=72.0
Q ss_pred ceEEEEECCCCeeee-cCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE
Q 042957 108 AWVLRYNVKSNEWTR-CAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~ 186 (371)
..+..+|..+.+-.. +...+ .........-+++.++.|+.+ ..+.+||..+.+-...-.... ..-..++
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~g~~d--------g~v~i~~~~~~~~~~~~~~~~-~~v~~~~ 171 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGP-VDAWTLAFSPDSQYLATGTHV--------GKVNIFGVESGKKEYSLDTRG-KFILSIA 171 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCT-TCCCCEEECTTSSEEEEECTT--------SEEEEEETTTCSEEEEEECSS-SCEEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCC-ccEEEEEECCCCCEEEEEcCC--------CcEEEEEcCCCceeEEecCCC-ceEEEEE
Confidence 567888887765432 22111 111122223366777777764 368888887765322111111 1111222
Q ss_pred -EECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEE
Q 042957 187 -TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 187 -~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 264 (371)
.-++++++.|+.+ ..+.+||+++.+-... +..-......++.. ++++++.|+.+. .+.
T Consensus 172 ~spdg~~lasg~~d--------------g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg----~i~ 231 (321)
T 3ow8_A 172 YSPDGKYLASGAID--------------GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDG----YIK 231 (321)
T ss_dssp ECTTSSEEEEEETT--------------SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTS----CEE
T ss_pred ECCCCCEEEEEcCC--------------CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCC----eEE
Confidence 2356677777543 4688999988753222 21111112233332 567788877655 499
Q ss_pred EEeCCCCceE
Q 042957 265 SYDGELNMWD 274 (371)
Q Consensus 265 ~yd~~~~~W~ 274 (371)
+||+.+....
T Consensus 232 iwd~~~~~~~ 241 (321)
T 3ow8_A 232 IYDVQHANLA 241 (321)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCccee
Confidence 9999876543
No 44
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.22 E-value=0.04 Score=48.19 Aligned_cols=113 Identities=9% Similarity=0.016 Sum_probs=75.5
Q ss_pred eeEEEEC-CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCcccc
Q 042957 133 FACTVCD-NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFT 211 (371)
Q Consensus 133 ~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~ 211 (371)
++++... +.||+..|... .+.+.++|+.+++-...-+++.......++..+++||+.....
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~------------ 85 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK------------ 85 (266)
T ss_dssp EEEEECSTTEEEEEECSTT------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC------------
T ss_pred ccEEEeCCCeEEEECCCCC------CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC------------
Confidence 5666655 89999877421 3689999999987655444444444455667789999997422
Q ss_pred ccCeeEEEECCCCceeeccccccC-CCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 212 ERSSAEVYDTQAGKWDLVARMWQL-DIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 212 ~~~~v~~yd~~t~~W~~~~~~~~~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
+.+.+||+++.+- +..++.. .. +.+++.-++++|+..| .+.+.++|+++.+-
T Consensus 86 --~~v~viD~~t~~v--~~~i~~g~~~-g~glt~Dg~~l~vs~g-----s~~l~viD~~t~~v 138 (266)
T 2iwa_A 86 --NIGFIYDRRTLSN--IKNFTHQMKD-GWGLATDGKILYGSDG-----TSILYEIDPHTFKL 138 (266)
T ss_dssp --SEEEEEETTTTEE--EEEEECCSSS-CCEEEECSSSEEEECS-----SSEEEEECTTTCCE
T ss_pred --CEEEEEECCCCcE--EEEEECCCCC-eEEEEECCCEEEEECC-----CCeEEEEECCCCcE
Confidence 5789999997753 3333322 22 2345555778998754 23699999988653
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.20 E-value=0.021 Score=50.71 Aligned_cols=178 Identities=8% Similarity=-0.056 Sum_probs=92.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+..||..+.+......+.. +...-.+++.. ++..++.|+.+ ..+..||..
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d-----------------------g~v~~~d~~ 171 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTS----SAPACYALAISPDSKVCFSCCSD-----------------------GNIAVWDLH 171 (337)
T ss_dssp SEEEEEECCCC--EEEEEEEC----SSSCEEEEEECTTSSEEEEEETT-----------------------SCEEEEETT
T ss_pred CcEEEEECCCCCcceeeeccc----CCCceEEEEECCCCCEEEEEeCC-----------------------CcEEEEeCC
Confidence 458889988876443332221 11112234443 45666666653 458888988
Q ss_pred CCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE-ECCEEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT-WQGKIHV 194 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~~lyv 194 (371)
+.+....-....... .+++. -+++.++.|+.+ ..+.+||..+.+-...-..+... ..++. -++++++
T Consensus 172 ~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~~~~~~~v--~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGA-SCIDISNDGTKLWTGGLD--------NTVRSWDLREGRQLQQHDFTSQI--FSLGYCPTGEWLA 240 (337)
T ss_dssp TTEEEEEECCCSSCE-EEEEECTTSSEEEEEETT--------SEEEEEETTTTEEEEEEECSSCE--EEEEECTTSSEEE
T ss_pred CCceeeeeecccCce-EEEEECCCCCEEEEEecC--------CcEEEEECCCCceEeeecCCCce--EEEEECCCCCEEE
Confidence 776433211111111 12222 256666676654 46889998876543322222221 12222 3566666
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
+|+.. ..+.+||..+..-..+.... .....++.. ++++++.++..+ .+.+||..+.+-
T Consensus 241 ~~~~~--------------~~i~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg----~i~~~~~~~~~~ 299 (337)
T 1gxr_A 241 VGMES--------------SNVEVLHVNKPDKYQLHLHE---SCVLSLKFAYCGKWFVSTGKDN----LLNAWRTPYGAS 299 (337)
T ss_dssp EEETT--------------SCEEEEETTSSCEEEECCCS---SCEEEEEECTTSSEEEEEETTS----EEEEEETTTCCE
T ss_pred EEcCC--------------CcEEEEECCCCCeEEEcCCc---cceeEEEECCCCCEEEEecCCC----cEEEEECCCCeE
Confidence 66532 46888999877533332111 111123332 466677766544 599999988664
Q ss_pred E
Q 042957 274 D 274 (371)
Q Consensus 274 ~ 274 (371)
.
T Consensus 300 ~ 300 (337)
T 1gxr_A 300 I 300 (337)
T ss_dssp E
T ss_pred E
Confidence 4
No 46
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.18 E-value=0.084 Score=45.91 Aligned_cols=179 Identities=9% Similarity=-0.030 Sum_probs=95.5
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+.+||+. +.+..+..... ...-++++.. ++.+|+.... ...+++||+.
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~~-----~~~~~~i~~~~~g~l~v~~~~-----------------------~~~i~~~~~~ 86 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPTP-----DAKVMCLTISSDGEVWFTENA-----------------------ANKIGRITKK 86 (299)
T ss_dssp TEEEEECTT-CCEEEEECSST-----TCCEEEEEECTTSCEEEEETT-----------------------TTEEEEECTT
T ss_pred CcEEEEcCC-CCeEEecCCcc-----cCceeeEEECCCCCEEEeCCC-----------------------CCeEEEECCC
Confidence 458899988 77665442111 0122345543 5688887543 2458888876
Q ss_pred CCeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-CCEEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-QGKIHV 194 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv 194 (371)
++.+.+........-..++.. +++||+..... ..+.++|+ +.+...............++.. +++||+
T Consensus 87 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v 156 (299)
T 2z2n_A 87 -GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNG--------NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWF 156 (299)
T ss_dssp -SCEEEEECSSTTCCEEEEEECTTSCEEEEETTT--------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEE
T ss_pred -CcEEEEeCCCcCCCceeeEECCCCCEEEEecCC--------ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEE
Confidence 445443311111122333333 57888875332 46888988 6555543211111222233332 568888
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
.... ...+.+||+ +++..... .+.......+++.. +++||+..... +.+.+||+ +..+
T Consensus 157 ~~~~--------------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~----~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 157 TENQ--------------NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEIIG----NKIGRITT-SGEI 215 (299)
T ss_dssp EETT--------------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT----TEEEEECT-TCCE
T ss_pred EeCC--------------CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEccCC----ceEEEECC-CCcE
Confidence 6521 247889999 77666542 12111112234443 56788875332 25999999 7776
Q ss_pred Eee
Q 042957 274 DEV 276 (371)
Q Consensus 274 ~~~ 276 (371)
..+
T Consensus 216 ~~~ 218 (299)
T 2z2n_A 216 TEF 218 (299)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 47
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.17 E-value=0.013 Score=53.60 Aligned_cols=175 Identities=6% Similarity=-0.031 Sum_probs=87.0
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-E-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee-E
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-C-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC-V 184 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~-~ 184 (371)
..+..+|..+.+-...-....... .+++. . ++.+++.|+.+ ..+.+||..+.+-............. +
T Consensus 161 g~v~iwd~~~~~~~~~~~~h~~~v-~~v~~s~~~~~~~~s~~~d--------g~v~~wd~~~~~~~~~~~~~~~~~~v~~ 231 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYNAHSSEV-NCVAACPGKDTIFLSCGED--------GRILLWDTRKPKPATRIDFCASDTIPTS 231 (357)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCE-EEEEECTTCSSCEEEEETT--------SCEEECCTTSSSCBCBCCCTTCCSCEEE
T ss_pred CeEEEEECCCCcEEEEEcCCCCCE-EEEEEccCCCceeeeeccC--------CceEEEECCCCceeeeeeeccccccccc
Confidence 457788888776433211111111 12222 2 33567777765 35788888776533322222111112 2
Q ss_pred EEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-C-CEEEEEcCCCCCcc
Q 042957 185 GVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-D-NRLFSSGDCLKAWK 260 (371)
Q Consensus 185 ~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~ 260 (371)
++.. ++.+++.|+.+ ..+.+||+.+.+-.. .+.........++.. + +++++.|+.+.
T Consensus 232 v~~sp~~~~~la~g~~d--------------~~i~~wd~~~~~~~~--~~~~~~~~v~~l~~sp~~~~~lasgs~D~--- 292 (357)
T 4g56_B 232 VTWHPEKDDTFACGDET--------------GNVSLVNIKNPDSAQ--TSAVHSQNITGLAYSYHSSPFLASISEDC--- 292 (357)
T ss_dssp EEECTTSTTEEEEEESS--------------SCEEEEESSCGGGCE--EECCCSSCEEEEEECSSSSCCEEEEETTS---
T ss_pred hhhhhcccceEEEeecc--------------cceeEEECCCCcEeE--EEeccceeEEEEEEcCCCCCEEEEEeCCC---
Confidence 2222 35677777533 467889988764221 111111111123332 3 35666666544
Q ss_pred CeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEee--eCCeEEEEcceeecccccceeeEEEEee
Q 042957 261 GHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAP--IGTHLYFLAGYRMAGELARTMSMVHIFD 338 (371)
Q Consensus 261 ~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~v~~~d 338 (371)
.+.+||.++.+-... +.+. ..-.+++. .++.+++.||.+. .|.+||
T Consensus 293 -~i~iwd~~~~~~~~~-------~~H~---------------~~V~~vafsP~d~~~l~s~s~Dg---------~v~iW~ 340 (357)
T 4g56_B 293 -TVAVLDADFSEVFRD-------LSHR---------------DFVTGVAWSPLDHSKFTTVGWDH---------KVLHHH 340 (357)
T ss_dssp -CEEEECTTSCEEEEE-------CCCS---------------SCEEEEEECSSSTTEEEEEETTS---------CEEEEE
T ss_pred -EEEEEECCCCcEeEE-------CCCC---------------CCEEEEEEeCCCCCEEEEEcCCC---------eEEEEE
Confidence 499999988754433 1111 11112232 3678888888654 577888
Q ss_pred cccc
Q 042957 339 TAAK 342 (371)
Q Consensus 339 ~~~~ 342 (371)
+.+.
T Consensus 341 ~~~~ 344 (357)
T 4g56_B 341 LPSE 344 (357)
T ss_dssp CC--
T ss_pred CCCC
Confidence 7654
No 48
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.15 E-value=0.0079 Score=56.41 Aligned_cols=150 Identities=12% Similarity=0.140 Sum_probs=80.7
Q ss_pred EEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCC
Q 042957 70 IVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKS 149 (371)
Q Consensus 70 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~ 149 (371)
.+..++..++.|+.+ ..+..||..+.+-... +......-.+..+++.+++.|+.+
T Consensus 138 ~~~~d~~~l~~g~~d-----------------------g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~d 192 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD-----------------------NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSD 192 (435)
T ss_dssp EEECCSSEEEEEESS-----------------------SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETT
T ss_pred EEEECCCEEEEEeCC-----------------------CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCC
Confidence 444577777777763 5688888877654322 111112223333477888888875
Q ss_pred CCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeec
Q 042957 150 NLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLV 229 (371)
Q Consensus 150 ~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~ 229 (371)
..+.+||..+.+.... +.........+..++.+++.|+.+ ..+.+||..+..-...
T Consensus 193 --------g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~d--------------g~i~vwd~~~~~~~~~ 248 (435)
T 1p22_A 193 --------STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKD--------------RSIAVWDMASPTDITL 248 (435)
T ss_dssp --------SCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETT--------------SCEEEEECSSSSCCEE
T ss_pred --------CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCC--------------CcEEEEeCCCCCCcee
Confidence 3588999887754322 111111122233345566666533 4688899887653221
Q ss_pred cccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 230 ARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
.............+..+++.++.|+.++ .+.+||+.+.+
T Consensus 249 ~~~~~~~~~~v~~~~~~~~~l~s~~~dg----~i~vwd~~~~~ 287 (435)
T 1p22_A 249 RRVLVGHRAAVNVVDFDDKYIVSASGDR----TIKVWNTSTCE 287 (435)
T ss_dssp EEEECCCSSCEEEEEEETTEEEEEETTS----EEEEEETTTCC
T ss_pred eeEecCCCCcEEEEEeCCCEEEEEeCCC----eEEEEECCcCc
Confidence 1111111111123334666666666544 49999988764
No 49
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.15 E-value=0.029 Score=52.42 Aligned_cols=213 Identities=15% Similarity=0.114 Sum_probs=110.2
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKS 117 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 117 (371)
..+..||..+.+-... +. .|. .....+..++.+++.|+.+ ..+..+|..+
T Consensus 153 g~i~iwd~~~~~~~~~--~~----~h~-~~v~~l~~~~~~l~sg~~d-----------------------g~i~vwd~~~ 202 (435)
T 1p22_A 153 NTIKIWDKNTLECKRI--LT----GHT-GSVLCLQYDERVIITGSSD-----------------------STVRVWDVNT 202 (435)
T ss_dssp SCEEEEESSSCCEEEE--EC----CCS-SCEEEEECCSSEEEEEETT-----------------------SCEEEEESSS
T ss_pred CeEEEEeCCCCeEEEE--Ec----CCC-CcEEEEEECCCEEEEEcCC-----------------------CeEEEEECCC
Confidence 3588899877653322 11 011 1123333477777777763 5688888877
Q ss_pred CeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC-CCCCCCceeeEEEEECCEEEEEe
Q 042957 118 NEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL-PNMSTLRYKCVGVTWQGKIHVVS 196 (371)
Q Consensus 118 ~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~~~~~~~~~~~~~lyv~G 196 (371)
.+-...- ...........+++..++.|+.+ ..+.+||..+..-... ..+.........+..+++.++.|
T Consensus 203 ~~~~~~~--~~h~~~v~~l~~~~~~l~s~s~d--------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~ 272 (435)
T 1p22_A 203 GEMLNTL--IHHCEAVLHLRFNNGMMVTCSKD--------RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSA 272 (435)
T ss_dssp CCEEEEE--CCCCSCEEEEECCTTEEEEEETT--------SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEE
T ss_pred CcEEEEE--cCCCCcEEEEEEcCCEEEEeeCC--------CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEE
Confidence 6543221 11112222333455567777765 3588899876542211 11111111112223355556666
Q ss_pred cccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 197 GFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 197 G~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
+.+ ..+.+||+.+.+-... +...... ...+..++.+++.|+.++ .+.+||+.+..-..
T Consensus 273 ~~d--------------g~i~vwd~~~~~~~~~--~~~~~~~-v~~~~~~~~~l~~g~~dg----~i~iwd~~~~~~~~- 330 (435)
T 1p22_A 273 SGD--------------RTIKVWNTSTCEFVRT--LNGHKRG-IACLQYRDRLVVSGSSDN----TIRLWDIECGACLR- 330 (435)
T ss_dssp ETT--------------SEEEEEETTTCCEEEE--EECCSSC-EEEEEEETTEEEEEETTS----CEEEEETTTCCEEE-
T ss_pred eCC--------------CeEEEEECCcCcEEEE--EcCCCCc-EEEEEeCCCEEEEEeCCC----eEEEEECCCCCEEE-
Confidence 533 4788999988753322 2211111 123344666777776554 49999998754222
Q ss_pred cCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 277 NGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 277 ~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
.+... ......+..+++.++.|+.++ .|.+||+.+.
T Consensus 331 ------~~~~h---------------~~~v~~~~~~~~~l~sg~~dg---------~i~vwd~~~~ 366 (435)
T 1p22_A 331 ------VLEGH---------------EELVRCIRFDNKRIVSGAYDG---------KIKVWDLVAA 366 (435)
T ss_dssp ------EECCC---------------SSCEEEEECCSSEEEEEETTS---------CEEEEEHHHH
T ss_pred ------EEeCC---------------cCcEEEEEecCCEEEEEeCCC---------cEEEEECCCC
Confidence 12111 111223344777878887543 5778887654
No 50
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.14 E-value=0.019 Score=53.42 Aligned_cols=188 Identities=12% Similarity=0.062 Sum_probs=95.8
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKS 117 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 117 (371)
.+..||+.+.+........... .|...-.+++.. ++.+|+.++.+ ..+.+||..+
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~s~~~d-----------------------~~v~~~d~~~ 200 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYK-KKLGFVETISIPEHNELWVSQMQA-----------------------NAVHVFDLKT 200 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHH-TTCCEEEEEEEGGGTEEEEEEGGG-----------------------TEEEEEETTT
T ss_pred eEEEEECCCCeEeeecCccccc-ccCCceeEEEEcCCCEEEEEECCC-----------------------CEEEEEECCC
Confidence 4888998887765543332211 111122233332 57788877653 5688999877
Q ss_pred CeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE-ECCEEEE
Q 042957 118 NEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT-WQGKIHV 194 (371)
Q Consensus 118 ~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~~lyv 194 (371)
.+....-... ...-..++.. +..+|+.+..+ ..+.+||+.+.+....-. ....-..++. -+++.++
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~--------~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 201 LAYKATVDLT-GKWSKILLYDPIRDLVYCSNWIS--------EDISVIDRKTKLEIRKTD--KIGLPRGLLLSKDGKELY 269 (433)
T ss_dssp CCEEEEEECS-SSSEEEEEEETTTTEEEEEETTT--------TEEEEEETTTTEEEEECC--CCSEEEEEEECTTSSEEE
T ss_pred ceEEEEEcCC-CCCeeEEEEcCCCCEEEEEecCC--------CcEEEEECCCCcEEEEec--CCCCceEEEEcCCCCEEE
Confidence 6543221111 1111222222 45677776543 368999998876543322 2222222222 2454444
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+++........ .-..+.+||+.+.+-......+. ....++.. ++.+|+.++..+ .+.+||+.+.+
T Consensus 270 ~~~~~~~~~~~------~dg~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~----~v~v~d~~~~~ 336 (433)
T 3bws_A 270 IAQFSASNQES------GGGRLGIYSMDKEKLIDTIGPPG---NKRHIVSGNTENKIYVSDMCCS----KIEVYDLKEKK 336 (433)
T ss_dssp EEEEESCTTCS------CCEEEEEEETTTTEEEEEEEEEE---CEEEEEECSSTTEEEEEETTTT----EEEEEETTTTE
T ss_pred EEECCCCcccc------CCCeEEEEECCCCcEEeeccCCC---CcceEEECCCCCEEEEEecCCC----EEEEEECCCCc
Confidence 44433221100 01478899998876443322121 11123332 346888765544 59999998765
Q ss_pred eE
Q 042957 273 WD 274 (371)
Q Consensus 273 W~ 274 (371)
-.
T Consensus 337 ~~ 338 (433)
T 3bws_A 337 VQ 338 (433)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.14 E-value=0.05 Score=50.17 Aligned_cols=136 Identities=7% Similarity=-0.042 Sum_probs=67.2
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceE-eCCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWT-PLPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~-~~~~~p~~~~~~~~ 185 (371)
..+..||..+.+-...-....... .+++. -++++++.|+.+ ..+.+||..+.+-. .+..-... -..+
T Consensus 119 g~i~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~s~d--------~~i~iwd~~~~~~~~~~~~h~~~--v~~~ 187 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQAHVSEI-TKLKFFPSGEALISSSQD--------MQLKIWSVKDGSNPRTLIGHRAT--VTDI 187 (420)
T ss_dssp SCEEEECTTSCEEEEETTSSSSCE-EEEEECTTSSEEEEEETT--------SEEEEEETTTCCCCEEEECCSSC--EEEE
T ss_pred CCEEEEeCCCcceeeecccccCcc-EEEEECCCCCEEEEEeCC--------CeEEEEeCCCCcCceEEcCCCCc--EEEE
Confidence 457888887665433321111111 12222 256677777765 36889998765321 11111111 1122
Q ss_pred EEE-CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecccccc-CCCCCCeEEE-------------------
Q 042957 186 VTW-QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQ-LDIPPNQIVE------------------- 244 (371)
Q Consensus 186 ~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~-~~~~~~~~~~------------------- 244 (371)
+.. ++++++.|+.+ ..+.+||+.+.+-...-.... .......++.
T Consensus 188 ~~~~~~~~l~s~~~d--------------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 253 (420)
T 3vl1_A 188 AIIDRGRNVLSASLD--------------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNL 253 (420)
T ss_dssp EEETTTTEEEEEETT--------------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTT
T ss_pred EEcCCCCEEEEEcCC--------------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccce
Confidence 222 55566666533 468889988765332211110 0000001111
Q ss_pred ---ECCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 245 ---VDNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 245 ---~~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
-++++++.|+..+ .+.+||+.+..
T Consensus 254 ~~s~~~~~l~~~~~dg----~i~i~d~~~~~ 280 (420)
T 3vl1_A 254 EFGTYGKYVIAGHVSG----VITVHNVFSKE 280 (420)
T ss_dssp CSSCTTEEEEEEETTS----CEEEEETTTCC
T ss_pred EEcCCCCEEEEEcCCC----eEEEEECCCCc
Confidence 2566777776554 49999998765
No 52
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.13 E-value=0.037 Score=50.28 Aligned_cols=185 Identities=9% Similarity=-0.032 Sum_probs=88.8
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKS 117 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 117 (371)
.+..||..+++-....... ...|...-.+++.. +++.++.|+.+ ..+..+|..+
T Consensus 104 ~v~lWd~~~~~~~~~~~~~--~~~H~~~V~~v~~spdg~~l~sgs~d-----------------------~~i~iwd~~~ 158 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFC--KYEHDDIVSTVSVLSSGTQAVSGSKD-----------------------ICIKVWDLAQ 158 (344)
T ss_dssp EEEEEEECTTSSCEEEEEE--EECCSSCEEEEEECTTSSEEEEEETT-----------------------SCEEEEETTT
T ss_pred EEEEEeccCCCceeEeecc--ccCCCCCEEEEEECCCCCEEEEEeCC-----------------------CeEEEEECCC
Confidence 4777887776532211110 00122222244443 56677777653 4578888877
Q ss_pred CeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCC-CceeeEEEEE--CCEEE
Q 042957 118 NEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMST-LRYKCVGVTW--QGKIH 193 (371)
Q Consensus 118 ~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~~~~~~~~~~--~~~ly 193 (371)
++-...-.-.........+.. +..+++.|+.+ ..+.+||..+.+-...-.... .....+++.. +++++
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED--------NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEE
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccc--------cccccccccccceeeeeecceeeccceeeeecCCCCcce
Confidence 653322111111111111112 34577777765 358889998765433211111 1111122222 45677
Q ss_pred EEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-C-CEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 194 VVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-D-NRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 194 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
+.|+.+ ..+.+||+++.+- +..+..-.....+++.. + .++++.|+.+. .+.+||..+.
T Consensus 231 ~sg~~d--------------g~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~----~i~vwd~~~~ 290 (344)
T 4gqb_B 231 VFGDEN--------------GTVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSEDC----SLAVLDSSLS 290 (344)
T ss_dssp EEEETT--------------SEEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEETTS----CEEEECTTCC
T ss_pred EEeccC--------------CcEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCCC----eEEEEECCCC
Confidence 777543 4688899987642 22221111111123332 3 35666776554 4999999887
Q ss_pred ceEee
Q 042957 272 MWDEV 276 (371)
Q Consensus 272 ~W~~~ 276 (371)
+-..+
T Consensus 291 ~~~~~ 295 (344)
T 4gqb_B 291 ELFRS 295 (344)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 54433
No 53
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.12 E-value=0.11 Score=45.11 Aligned_cols=177 Identities=10% Similarity=0.033 Sum_probs=91.9
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKS 117 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 117 (371)
.+.+||+. .+...+. ++. ....-++++.. ++.+|+.... ...+++||+ +
T Consensus 79 ~i~~~~~~-g~~~~~~-~~~----~~~~~~~i~~~~~g~l~v~~~~-----------------------~~~i~~~d~-~ 128 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYT-LPN----PDSAPYGITEGPNGDIWFTEMN-----------------------GNRIGRITD-D 128 (299)
T ss_dssp EEEEECTT-SCEEEEE-CSS----TTCCEEEEEECTTSCEEEEETT-----------------------TTEEEEECT-T
T ss_pred eEEEECCC-CcEEEEe-CCC----cCCCceeeEECCCCCEEEEecC-----------------------CceEEEECC-C
Confidence 47788876 4444332 111 01122345554 4788887433 246888888 5
Q ss_pred CeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCce-eeEEEE-ECCEEEE
Q 042957 118 NEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRY-KCVGVT-WQGKIHV 194 (371)
Q Consensus 118 ~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~-~~~~~~-~~~~lyv 194 (371)
++............-..++.. ++++|+.... ...+.+||+ +.+..... ++.... ...++. -+++||+
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v 198 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDNALWFTENQ--------NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWF 198 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEETT--------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEE
T ss_pred CCEEEecCCCCCCCCceEEEcCCCCEEEEeCC--------CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEE
Confidence 555443211111122233333 5788886432 246889998 77766542 121111 122333 2567888
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
.... ...+.+||+ +++..... .+.......+++.. +++||+..... +.+.+||+ +.+.
T Consensus 199 ~~~~--------------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~----~~i~~~d~-~g~~ 257 (299)
T 2z2n_A 199 VEII--------------GNKIGRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTEWGA----NKIGRLTS-NNII 257 (299)
T ss_dssp EETT--------------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT----TEEEEEET-TTEE
T ss_pred EccC--------------CceEEEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEeccCC----ceEEEECC-CCce
Confidence 7531 246889999 77765542 22111112234443 56788875322 25999999 4555
Q ss_pred Eee
Q 042957 274 DEV 276 (371)
Q Consensus 274 ~~~ 276 (371)
..+
T Consensus 258 ~~~ 260 (299)
T 2z2n_A 258 EEY 260 (299)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 54
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.10 E-value=0.039 Score=50.94 Aligned_cols=179 Identities=12% Similarity=0.113 Sum_probs=93.6
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+..||..+++........ +...-.+++.. ++..++.|+.+ ..+..||..
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~-----~~~~v~~v~~s~~~~~l~~~~~d-----------------------g~i~iwd~~ 164 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD-----ESTYVASVKWSHDGSFLSVGLGN-----------------------GLVDIYDVE 164 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC-----TTCCEEEEEECTTSSEEEEEETT-----------------------SCEEEEETT
T ss_pred CeEEEeeCCCCcEeEeeecC-----CCCCEEEEEECCCCCEEEEECCC-----------------------CeEEEEECc
Confidence 45889999888765544332 11122234443 45666666653 457888887
Q ss_pred CCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCce--EeCCCCCCCceeeEEEE-ECCEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQW--TPLPNMSTLRYKCVGVT-WQGKIH 193 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W--~~~~~~p~~~~~~~~~~-~~~~ly 193 (371)
+.+-...-. ...........++.+++.|+.+ ..+.+||..+..- ..+....... ..++. -+++++
T Consensus 165 ~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l 232 (401)
T 4aez_A 165 SQTKLRTMA--GHQARVGCLSWNRHVLSSGSRS--------GAIHHHDVRIANHQIGTLQGHSSEV--CGLAWRSDGLQL 232 (401)
T ss_dssp TCCEEEEEC--CCSSCEEEEEEETTEEEEEETT--------SEEEEEETTSSSCEEEEEECCSSCE--EEEEECTTSSEE
T ss_pred CCeEEEEec--CCCCceEEEEECCCEEEEEcCC--------CCEEEEecccCcceeeEEcCCCCCe--eEEEEcCCCCEE
Confidence 765432211 1122222333466677777765 4688899874321 1111111111 12222 256677
Q ss_pred EEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcC-CCCCccCeEEEEeCCC
Q 042957 194 VVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGD-CLKAWKGHIESYDGEL 270 (371)
Q Consensus 194 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG-~~~~~~~~~~~yd~~~ 270 (371)
+.|+.+ ..+.+||+.+..-... +.........++.. +..+++.|+ ... ..+.+||..+
T Consensus 233 ~s~~~d--------------~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~ll~~~~gs~d---~~i~i~d~~~ 293 (401)
T 4aez_A 233 ASGGND--------------NVVQIWDARSSIPKFT--KTNHNAAVKAVAWCPWQSNLLATGGGTMD---KQIHFWNAAT 293 (401)
T ss_dssp EEEETT--------------SCEEEEETTCSSEEEE--ECCCSSCCCEEEECTTSTTEEEEECCTTT---CEEEEEETTT
T ss_pred EEEeCC--------------CeEEEccCCCCCccEE--ecCCcceEEEEEECCCCCCEEEEecCCCC---CEEEEEECCC
Confidence 777643 4688999987543222 11111112234443 456777764 222 2599999987
Q ss_pred CceEe
Q 042957 271 NMWDE 275 (371)
Q Consensus 271 ~~W~~ 275 (371)
.+-..
T Consensus 294 ~~~~~ 298 (401)
T 4aez_A 294 GARVN 298 (401)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 65433
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.10 E-value=0.14 Score=45.64 Aligned_cols=138 Identities=5% Similarity=-0.080 Sum_probs=73.5
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCC-C-Cc-eee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMS-T-LR-YKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~-~~-~~~ 183 (371)
..++++|+.+.+-...-+............ -++.||+... + ..+.+||..+.+-....... . +. ...
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~--------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 234 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-D--------GELITIDTADNKILSRKKLLDDGKEHFFI 234 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-T--------SEEEEEETTTTEEEEEEECCCSSSCCCEE
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-C--------CeEEEEECCCCeEEEEEEcCCCCCCcccc
Confidence 568999998776433222111111122222 2456776643 1 46889999887543322221 1 11 112
Q ss_pred EEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCc
Q 042957 184 VGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAW 259 (371)
Q Consensus 184 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~ 259 (371)
.++.. ++.||+.... ...+.+||+.+.+....-..+.+ ..++.. ++.+|+.....+
T Consensus 235 ~~~~s~dg~~l~~~~~~--------------~~~v~~~d~~~~~~~~~~~~~~~----~~~~~s~dg~~l~v~~~~~~-- 294 (353)
T 3vgz_A 235 NISLDTARQRAFITDSK--------------AAEVLVVDTRNGNILAKVAAPES----LAVLFNPARNEAYVTHRQAG-- 294 (353)
T ss_dssp EEEEETTTTEEEEEESS--------------SSEEEEEETTTCCEEEEEECSSC----CCEEEETTTTEEEEEETTTT--
T ss_pred eEEECCCCCEEEEEeCC--------------CCEEEEEECCCCcEEEEEEcCCC----ceEEECCCCCEEEEEECCCC--
Confidence 22332 4557776521 25789999988875544333322 223333 445787754333
Q ss_pred cCeEEEEeCCCCceEee
Q 042957 260 KGHIESYDGELNMWDEV 276 (371)
Q Consensus 260 ~~~~~~yd~~~~~W~~~ 276 (371)
.+.+||+.+.+....
T Consensus 295 --~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 295 --KVSVIDAKSYKVVKT 309 (353)
T ss_dssp --EEEEEETTTTEEEEE
T ss_pred --eEEEEECCCCeEEEE
Confidence 599999988765443
No 56
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.09 E-value=0.074 Score=46.85 Aligned_cols=96 Identities=7% Similarity=0.083 Sum_probs=49.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE---CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEE
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL---GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYN 114 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 114 (371)
..+..||...+....+..+. .|...-.+++.. ++.+++.|+.+ ..+..+|
T Consensus 31 ~~v~iw~~~~~~~~~~~~l~----gH~~~V~~v~~s~~~~g~~l~s~s~D-----------------------~~v~iWd 83 (297)
T 2pm7_B 31 KTIKIFEVEGETHKLIDTLT----GHEGPVWRVDWAHPKFGTILASCSYD-----------------------GKVMIWK 83 (297)
T ss_dssp SCEEEEEBCSSCBCCCEEEC----CCSSCEEEEEECCGGGCSEEEEEETT-----------------------TEEEEEE
T ss_pred CEEEEEecCCCCcEEEEEEc----cccCCeEEEEecCCCcCCEEEEEcCC-----------------------CEEEEEE
Confidence 34778887655433332222 122222234332 25677777663 5677888
Q ss_pred CCCCeeeecCCCCCCCCCeeEEEE--C--CEEEEEcCCCCCCCCCCCceEEEEeCCCC
Q 042957 115 VKSNEWTRCAPLSVPRYDFACTVC--D--NKIYVAGGKSNLFSAKGTASAEVYHPELD 168 (371)
Q Consensus 115 ~~~~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 168 (371)
..+.+|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+.
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d--------~~v~~wd~~~~ 133 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD--------GKVSVVEFKEN 133 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEEBCSS
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC--------CcEEEEEecCC
Confidence 887777554332211111222222 2 4566677665 35777777654
No 57
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.08 E-value=0.15 Score=45.63 Aligned_cols=190 Identities=9% Similarity=-0.032 Sum_probs=100.7
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
+.+..+|+.+.+........ +...-+.+++. ++.+|+.... ...+.+||+.
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~-----~~~~p~gia~d~~g~l~v~d~~-----------------------~~~v~~~~~~ 120 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN-----LFYLPHGLSIDTDGNYWVTDVA-----------------------LHQVFKLDPH 120 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT-----TCSSEEEEEECTTSCEEEEETT-----------------------TTEEEEECTT
T ss_pred CcEEEEECCCCeEEeccCCC-----ccCCceEEEECCCCCEEEEECC-----------------------CCEEEEEeCC
Confidence 36889999877754322111 00112255554 5679887543 3568999986
Q ss_pred CC--eeeecCCC------CCCCCC-eeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCC-------CC
Q 042957 117 SN--EWTRCAPL------SVPRYD-FACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNM-------ST 178 (371)
Q Consensus 117 ~~--~W~~~~~~------~~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~-------p~ 178 (371)
.. .-..+... ...... ..+++. ++.||+..+.. ...+.+||.....-..+... +.
T Consensus 121 g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~ 193 (329)
T 3fvz_A 121 SKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-------NSRIVQFSPSGKFVTQWGEESSGSSPRPG 193 (329)
T ss_dssp CSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-------CCEEEEECTTSCEEEEECEECCSSSCCTT
T ss_pred CCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-------CCeEEEEcCCCCEEEEeccCCCCCCCCCc
Confidence 55 22222211 111112 234443 68999997532 25788998654433333210 11
Q ss_pred Cce-eeEEEEE-C-CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCC
Q 042957 179 LRY-KCVGVTW-Q-GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDC 255 (371)
Q Consensus 179 ~~~-~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~ 255 (371)
... -..+++. + +.|||..... ..|.+||+.+++....-..+........++...+.+|...|.
T Consensus 194 ~~~~p~gia~d~~~g~l~v~d~~~--------------~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 194 QFSVPHSLALVPHLDQLCVADREN--------------GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp EESCEEEEEEETTTTEEEEEETTT--------------TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC
T ss_pred ccCCCcEEEEECCCCEEEEEECCC--------------CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC
Confidence 111 2233333 4 7999987422 578999999776544322221111112344445667766664
Q ss_pred C---CCccCeEEEEeCCCCceEee
Q 042957 256 L---KAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 256 ~---~~~~~~~~~yd~~~~~W~~~ 276 (371)
. ......+.++|+.+.+....
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEE
Confidence 2 22234699999888766554
No 58
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.06 E-value=0.09 Score=53.38 Aligned_cols=221 Identities=8% Similarity=0.022 Sum_probs=119.7
Q ss_pred eeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCC
Q 042957 40 LASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSN 118 (371)
Q Consensus 40 ~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 118 (371)
+.+||+.++++..+.. +... ....-++++.. ++.|||- .. ...+++||+.++
T Consensus 385 l~~~~~~~~~~~~~~~-~~~~--~~~~v~~i~~d~~g~lWig-t~-----------------------~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 385 INVFENGKRVAIYNKE-NREL--LSNSVLCSLKDSEGNLWFG-TY-----------------------LGNISYYNTRLK 437 (781)
T ss_dssp EEEEETTEEEEECC------C--CCSBEEEEEECTTSCEEEE-ET-----------------------TEEEEEECSSSC
T ss_pred EEEEECCCCeEEEccC-CCCC--CCcceEEEEECCCCCEEEE-ec-----------------------cCCEEEEcCCCC
Confidence 7889998887776532 1110 11122344444 5678873 22 245899999999
Q ss_pred eeeecCCCCCCC-CCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCC-----CCceeeEEEEECCE
Q 042957 119 EWTRCAPLSVPR-YDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMS-----TLRYKCVGVTWQGK 191 (371)
Q Consensus 119 ~W~~~~~~~~~r-~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p-----~~~~~~~~~~~~~~ 191 (371)
+++.......+. .-.+++.. ++.|++... .-+.+||+.+++|+.....+ .........-.++.
T Consensus 438 ~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~ 507 (781)
T 3v9f_A 438 KFQIIELEKNELLDVRVFYEDKNKKIWIGTH----------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR 507 (781)
T ss_dssp EEEECCSTTTCCCCEEEEEECTTSEEEEEET----------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC
T ss_pred cEEEeccCCCCCCeEEEEEECCCCCEEEEEC----------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC
Confidence 998875321111 11222222 567777522 24889999998887654322 11111111123567
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCC-CCCeEEE-ECCEEEEEcCCCCCccCeE-EEEeC
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDI-PPNQIVE-VDNRLFSSGDCLKAWKGHI-ESYDG 268 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~-~~~~~~~-~~~~iyv~GG~~~~~~~~~-~~yd~ 268 (371)
|++..- ...+.+||+.+++++.......... ...+++. .++.|++-.. . .+ .+||+
T Consensus 508 lWigt~---------------~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~----Glv~~~d~ 566 (781)
T 3v9f_A 508 FWIGTF---------------GGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--E----GLVCFPSA 566 (781)
T ss_dssp EEEEES---------------SSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--T----EEEEESCT
T ss_pred EEEEEc---------------CCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--C----CceEEECC
Confidence 886541 1357889999998887653111111 1112222 2567777532 1 37 99999
Q ss_pred CCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeee-CCeEEEEcceeecccccceeeEEEEeeccccccccc
Q 042957 269 ELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPI-GTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWR 347 (371)
Q Consensus 269 ~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~ 347 (371)
++++++..... ..|+.. .. .+++.- +++|++.+. .-+..||+++. +++
T Consensus 567 ~~~~~~~~~~~--~gl~~~---------------~i-~~i~~d~~g~lW~~t~-----------~Gl~~~~~~~~--~~~ 615 (781)
T 3v9f_A 567 RNFDYQVFQRK--EGLPNT---------------HI-RAISEDKNGNIWASTN-----------TGISCYITSKK--CFY 615 (781)
T ss_dssp TTCCCEEECGG--GTCSCC---------------CC-CEEEECSSSCEEEECS-----------SCEEEEETTTT--EEE
T ss_pred CCCcEEEcccc--CCCCCc---------------eE-EEEEECCCCCEEEEcC-----------CceEEEECCCC--ceE
Confidence 99988877321 234322 12 344443 568887542 13567787765 555
Q ss_pred cc
Q 042957 348 SF 349 (371)
Q Consensus 348 ~~ 349 (371)
..
T Consensus 616 ~~ 617 (781)
T 3v9f_A 616 TY 617 (781)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 59
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.1 Score=45.54 Aligned_cols=153 Identities=11% Similarity=0.109 Sum_probs=74.1
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEE
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEV 218 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~ 218 (371)
++..++.|+.+ ..+.+||.... -.................-+++ ++.|+.. ..+.+
T Consensus 154 ~~~~l~~~~~d--------~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d--------------g~i~i 209 (313)
T 3odt_A 154 SENKFLTASAD--------KTIKLWQNDKV-IKTFSGIHNDVVRHLAVVDDGH-FISCSND--------------GLIKL 209 (313)
T ss_dssp TTTEEEEEETT--------SCEEEEETTEE-EEEECSSCSSCEEEEEEEETTE-EEEEETT--------------SEEEE
T ss_pred CCCEEEEEECC--------CCEEEEecCce-EEEEeccCcccEEEEEEcCCCe-EEEccCC--------------CeEEE
Confidence 56666777664 35788883322 1222221222222222345667 5555433 47889
Q ss_pred EECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCC
Q 042957 219 YDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDW 298 (371)
Q Consensus 219 yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~ 298 (371)
||..+.+-... +.........++...+..++.|+..+ .+.+||+.+.+-... -.....
T Consensus 210 ~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~l~~~~~dg----~v~iwd~~~~~~~~~-----~~~~~~----------- 267 (313)
T 3odt_A 210 VDMHTGDVLRT--YEGHESFVYCIKLLPNGDIVSCGEDR----TVRIWSKENGSLKQV-----ITLPAI----------- 267 (313)
T ss_dssp EETTTCCEEEE--EECCSSCEEEEEECTTSCEEEEETTS----EEEEECTTTCCEEEE-----EECSSS-----------
T ss_pred EECCchhhhhh--hhcCCceEEEEEEecCCCEEEEecCC----EEEEEECCCCceeEE-----EeccCc-----------
Confidence 99987643222 11111111234443332355555444 599999988765443 111110
Q ss_pred CCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccccccccccCccc
Q 042957 299 PPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIV 353 (371)
Q Consensus 299 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p 353 (371)
........-+++ ++.|+.+ ..|.+||+++. ++.....+.
T Consensus 268 ----~i~~~~~~~~~~-~~~~~~d---------g~i~iw~~~~~--~~~~~~~~~ 306 (313)
T 3odt_A 268 ----SIWSVDCMSNGD-IIVGSSD---------NLVRIFSQEKS--RWASEDEIK 306 (313)
T ss_dssp ----CEEEEEECTTSC-EEEEETT---------SCEEEEESCGG--GCCC-----
T ss_pred ----eEEEEEEccCCC-EEEEeCC---------CcEEEEeCCCC--ceeehhhhh
Confidence 112222223556 4555543 36889999987 676665554
No 60
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.04 E-value=0.089 Score=49.17 Aligned_cols=174 Identities=13% Similarity=0.190 Sum_probs=89.9
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT 187 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 187 (371)
..+..+|..+.+-...- ...........+++..++.|+.+ ..+.+||..+.+-... +.........+.
T Consensus 219 g~i~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~--~~~~~~~v~~~~ 286 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVL--MGHVAAVRCVQYDGRRVVSGAYD--------FMVKVWDPETETCLHT--LQGHTNRVYSLQ 286 (445)
T ss_dssp SEEEEEESSSCCEEEEE--ECCSSCEEEEEECSSCEEEEETT--------SCEEEEEGGGTEEEEE--ECCCSSCEEEEE
T ss_pred CEEEEEECCCCcEEEEE--cCCcccEEEEEECCCEEEEEcCC--------CEEEEEECCCCcEeEE--ecCCCCceEEEE
Confidence 56788888766532211 11112222333477777777765 3588888876543221 111111122233
Q ss_pred ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEe
Q 042957 188 WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYD 267 (371)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd 267 (371)
.++..++.|+.+ ..+.+||+.+.+-... +...... ......++.+++.|+.++ .+.+||
T Consensus 287 ~~~~~l~~~~~d--------------~~i~i~d~~~~~~~~~--~~~~~~~-v~~~~~~~~~l~~~~~dg----~i~vwd 345 (445)
T 2ovr_B 287 FDGIHVVSGSLD--------------TSIRVWDVETGNCIHT--LTGHQSL-TSGMELKDNILVSGNADS----TVKIWD 345 (445)
T ss_dssp ECSSEEEEEETT--------------SCEEEEETTTCCEEEE--ECCCCSC-EEEEEEETTEEEEEETTS----CEEEEE
T ss_pred ECCCEEEEEeCC--------------CeEEEEECCCCCEEEE--EcCCccc-EEEEEEeCCEEEEEeCCC----eEEEEE
Confidence 466666677543 4688999987753322 1111111 122334555666666544 499999
Q ss_pred CCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 268 GELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 268 ~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
+.+.+-... +... .........+..++.+++.|+.++ .|.+||..+.
T Consensus 346 ~~~~~~~~~-------~~~~------------~~~~~~v~~~~~~~~~l~s~~~dg---------~v~iwd~~~~ 392 (445)
T 2ovr_B 346 IKTGQCLQT-------LQGP------------NKHQSAVTCLQFNKNFVITSSDDG---------TVKLWDLKTG 392 (445)
T ss_dssp TTTCCEEEE-------ECST------------TSCSSCEEEEEECSSEEEEEETTS---------EEEEEETTTC
T ss_pred CCCCcEEEE-------EccC------------CCCCCCEEEEEECCCEEEEEeCCC---------eEEEEECCCC
Confidence 977543222 1100 000112233444677777776543 6788888765
No 61
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.04 E-value=0.038 Score=49.70 Aligned_cols=187 Identities=12% Similarity=0.105 Sum_probs=92.3
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
-.++.+|+.++++..+....... .-..++.. ++++|+.+... ....+++||+.
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~-----~p~~~a~spdg~l~~~~~~~---------------------~~~~v~~~~~~ 71 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQ-----NPTYLALSAKDCLYSVDKED---------------------DEGGIAAWQID 71 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECS-----CCCCEEECTTCEEEEEEEET---------------------TEEEEEEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccC-----CcceEEEccCCeEEEEEecC---------------------CCceEEEEEec
Confidence 34788899888877654322111 11134433 67777775321 13568999998
Q ss_pred CCeeeecCCCCCC--CCCeeEEEECC-EEEEEcCCCCCCCCCCCceEEEEeCC-CCceEeCCCC------CCCc----ee
Q 042957 117 SNEWTRCAPLSVP--RYDFACTVCDN-KIYVAGGKSNLFSAKGTASAEVYHPE-LDQWTPLPNM------STLR----YK 182 (371)
Q Consensus 117 ~~~W~~~~~~~~~--r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~yd~~-t~~W~~~~~~------p~~~----~~ 182 (371)
+++++.+..+... .-...+..-++ .||+.+..+ ..+.+||.. ..+.+.+..+ |..| .-
T Consensus 72 ~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~--------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~ 143 (347)
T 3hfq_A 72 GQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK--------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHI 143 (347)
T ss_dssp TTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT--------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCE
T ss_pred CCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC--------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCc
Confidence 8887666542211 11222223344 566664322 457777774 3333332211 1111 11
Q ss_pred eEEE-EECCEEEEEecccCCCCCCCCccccccCeeEEEECC-CCceeeccccccC-CCCCCeEEEE-CC-EEEEEcCCCC
Q 042957 183 CVGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQ-AGKWDLVARMWQL-DIPPNQIVEV-DN-RLFSSGDCLK 257 (371)
Q Consensus 183 ~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~-~~~~~~~~~~-~~-~iyv~GG~~~ 257 (371)
+.++ .-++++|+.+.. .+.+.+||+. +.+...+...... ......++.. ++ .+|+.+...+
T Consensus 144 ~~~~~spdg~l~v~~~~--------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~ 209 (347)
T 3hfq_A 144 HYTDLTPDNRLAVIDLG--------------SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS 209 (347)
T ss_dssp EEEEECTTSCEEEEETT--------------TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred eEEEECCCCcEEEEeCC--------------CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC
Confidence 1222 236677776531 1468889887 5555544322211 1111123332 44 4777654332
Q ss_pred CccCeEEEEeCC--CCceEee
Q 042957 258 AWKGHIESYDGE--LNMWDEV 276 (371)
Q Consensus 258 ~~~~~~~~yd~~--~~~W~~~ 276 (371)
.+.+|+.. +.+++.+
T Consensus 210 ----~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 210 ----QIASLKYDTQTGAFTQL 226 (347)
T ss_dssp ----EEEEEEEETTTTEEEEE
T ss_pred ----EEEEEEecCCCCceEEe
Confidence 35666554 5666654
No 62
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.93 E-value=0.044 Score=49.43 Aligned_cols=136 Identities=14% Similarity=0.095 Sum_probs=71.6
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCC-eeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCC-CceeeE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYD-FACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMST-LRYKCV 184 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~~~~~~ 184 (371)
..+..||..+.+++.+..+...... .+++. -++++++.|+.+ ..+.+||..+.++.....+.. ...-..
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~~~~~~~~~~~~~~v~~ 101 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD--------RNAYVWTLKGRTWKPTLVILRINRAARC 101 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT--------SCEEEEEEETTEEEEEEECCCCSSCEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC--------CeEEEEECCCCeeeeeEEeecCCCceeE
Confidence 5688889888876655444322222 12222 256677777764 358889988887655432221 111122
Q ss_pred EEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc-eeeccccccCCCC-CCeEEEE-CCEEEEEcCCCCCcc
Q 042957 185 GVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK-WDLVARMWQLDIP-PNQIVEV-DNRLFSSGDCLKAWK 260 (371)
Q Consensus 185 ~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~~~~-~~~~~~~-~~~iyv~GG~~~~~~ 260 (371)
+.. -++++++.|+.. ..+.+||..+.. |............ ...++.. ++++++.|+...
T Consensus 102 ~~~~~~~~~l~~~~~d--------------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--- 164 (372)
T 1k8k_C 102 VRWAPNEKKFAVGSGS--------------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF--- 164 (372)
T ss_dssp EEECTTSSEEEEEETT--------------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS---
T ss_pred EEECCCCCEEEEEeCC--------------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC---
Confidence 222 256666666533 356777776553 3333222221111 1123322 566777776544
Q ss_pred CeEEEEeCC
Q 042957 261 GHIESYDGE 269 (371)
Q Consensus 261 ~~~~~yd~~ 269 (371)
.+.+||+.
T Consensus 165 -~i~~~d~~ 172 (372)
T 1k8k_C 165 -KCRIFSAY 172 (372)
T ss_dssp -CEEEEECC
T ss_pred -CEEEEEcc
Confidence 48999965
No 63
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.93 E-value=0.17 Score=43.86 Aligned_cols=177 Identities=11% Similarity=0.072 Sum_probs=92.5
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+.+||+. +++..+.. +.. ...-++++.. ++.+|+.... ...+++||+.
T Consensus 83 ~~v~~~d~~-g~~~~~~~-~~~----~~~~~~i~~~~~g~l~v~~~~-----------------------~~~i~~~~~~ 133 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPL-PQP----DSGPYGITEGLNGDIWFTQLN-----------------------GDRIGKLTAD 133 (300)
T ss_dssp TEEEEECTT-SCEEEEEC-SST----TCCEEEEEECSTTCEEEEETT-----------------------TTEEEEECTT
T ss_pred CeEEEECCC-CCeEEecC-CCC----CCCCccceECCCCCEEEEccC-----------------------CCeEEEECCC
Confidence 458888887 66654422 110 0122345554 5788887432 2468888887
Q ss_pred CCeeeecCCCCCC-CCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee-EEEEE-CCEE
Q 042957 117 SNEWTRCAPLSVP-RYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC-VGVTW-QGKI 192 (371)
Q Consensus 117 ~~~W~~~~~~~~~-r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~-~~~~~-~~~l 192 (371)
++..... ++.. ..-..++. -+++||+.... ...+.+||+ +.+..... ++...... .++.. ++.|
T Consensus 134 -g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~--------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l 201 (300)
T 2qc5_A 134 -GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ--------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGAL 201 (300)
T ss_dssp -SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT--------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSE
T ss_pred -CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC--------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCE
Confidence 5554432 1211 11223333 25678876432 246888988 66665542 22222222 22232 5678
Q ss_pred EEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 193 HVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 193 yv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
|+.... ...+.+||+ +.++.... .+.......+++.. +++||+..... +.+.+||+ +.
T Consensus 202 ~v~~~~--------------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~----~~i~~~~~-~g 260 (300)
T 2qc5_A 202 WFVEIM--------------GNKIGRITT-TGEISEYD-IPTPNARPHAITAGKNSEIWFTEWGA----NQIGRITN-DN 260 (300)
T ss_dssp EEEETT--------------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT----TEEEEECT-TS
T ss_pred EEEccC--------------CCEEEEEcC-CCcEEEEE-CCCCCCCceEEEECCCCCEEEeccCC----CeEEEECC-CC
Confidence 887621 146888998 55555442 12111112234433 56788875322 35999999 45
Q ss_pred ceEee
Q 042957 272 MWDEV 276 (371)
Q Consensus 272 ~W~~~ 276 (371)
+....
T Consensus 261 ~~~~~ 265 (300)
T 2qc5_A 261 TIQEY 265 (300)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 55554
No 64
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.90 E-value=0.15 Score=43.74 Aligned_cols=137 Identities=12% Similarity=0.028 Sum_probs=70.9
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~ 186 (371)
..+.+||..+........... ..-.+++.. +++||+... . ..+.+||+.......+..... ..-..++
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~-~--------~~i~~~d~~~~~~~~~~~~~~-~~p~~i~ 114 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-N--------NRVVTLAAGSNNQTVLPFDGL-NYPEGLA 114 (270)
T ss_dssp CEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET-T--------TEEEEECTTCSCCEECCCCSC-SSEEEEE
T ss_pred CcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC-C--------CEEEEEeCCCceEeeeecCCc-CCCcceE
Confidence 568888887665544332111 112233333 567888754 2 368899988765554432111 1122333
Q ss_pred EE-CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEE
Q 042957 187 TW-QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 187 ~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 264 (371)
.. +++||+..... ..+.+||..+......... ... ...+++.. +++||+..... ..+.
T Consensus 115 ~~~~g~l~v~~~~~--------------~~i~~~~~~~~~~~~~~~~-~~~-~p~~i~~~~~g~l~v~~~~~----~~i~ 174 (270)
T 1rwi_B 115 VDTQGAVYVADRGN--------------NRVVKLAAGSKTQTVLPFT-GLN-DPDGVAVDNSGNVYVTDTDN----NRVV 174 (270)
T ss_dssp ECTTCCEEEEEGGG--------------TEEEEECTTCCSCEECCCC-SCC-SCCCEEECTTCCEEEEEGGG----TEEE
T ss_pred ECCCCCEEEEECCC--------------CEEEEEECCCceeEeeccc-cCC-CceeEEEeCCCCEEEEECCC----CEEE
Confidence 32 67799876322 4678887766554332211 111 12345544 57888875432 3599
Q ss_pred EEeCCCCceEe
Q 042957 265 SYDGELNMWDE 275 (371)
Q Consensus 265 ~yd~~~~~W~~ 275 (371)
+||+....-..
T Consensus 175 ~~~~~~~~~~~ 185 (270)
T 1rwi_B 175 KLEAESNNQVV 185 (270)
T ss_dssp EECTTTCCEEE
T ss_pred EEecCCCceEe
Confidence 99998765443
No 65
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.90 E-value=0.097 Score=50.83 Aligned_cols=111 Identities=6% Similarity=-0.017 Sum_probs=54.9
Q ss_pred CeeEEEECCCCceeeccccccCCCCCCeEEEE-CCE-EEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCCCCcccC
Q 042957 214 SSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNR-LFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTS 291 (371)
Q Consensus 214 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~ 291 (371)
..+..+|..+.+-..+..++..... +.++.. +++ +|+.+... +.+.++|.++.+-...- .....|+
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~~~~~-~~~~~spdg~~l~va~~~~----~~v~v~D~~tg~l~~~i--~~g~~ph----- 369 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGAAPFL-HDGGWDSSHRYFMTAANNS----NKVAVIDSKDRRLSALV--DVGKTPH----- 369 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEECCSSC-CCEEECTTSCEEEEEEGGG----TEEEEEETTTTEEEEEE--ECSSSBC-----
T ss_pred CeEEEEEecCCCcceeEEeccCcCc-cCceECCCCCEEEEEecCC----CeEEEEECCCCeEEEee--ccCCCCC-----
Confidence 5788899887543222222222222 334333 444 55543222 35999999987644430 1112222
Q ss_pred CCCCCCCCCceeeeeeEeee-CCeEEEEcceeecccccceeeEEEEeecccc---cccccccCcccc
Q 042957 292 STNTEDWPPIQRLYLTMAPI-GTHLYFLAGYRMAGELARTMSMVHIFDTAAK---SDAWRSFEPIVE 354 (371)
Q Consensus 292 ~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~---~~~W~~~~~~p~ 354 (371)
+-.+...+.- ++.+|+.+...+ .+|-+||.++. ...|+.+..++-
T Consensus 370 ----------~g~g~~~~~p~~g~~~~s~~~~d--------~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 370 ----------PGRGANFVHPKYGPVWSTSHLGD--------GSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp ----------CTTCEEEEETTTEEEEEEEBSSS--------SEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred ----------CCCCcccCCCCCccEEEeccCCC--------ceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 1122222222 367777654322 35677777652 012888776664
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.89 E-value=0.071 Score=49.17 Aligned_cols=149 Identities=7% Similarity=0.035 Sum_probs=77.2
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe-CCCCCCCceeeEEEEE--CCEEEEEecccCCCCCCCCccccccCe
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP-LPNMSTLRYKCVGVTW--QGKIHVVSGFAQRADSDGSVHFTERSS 215 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~ 215 (371)
++.+++.|+.+ ..+.+||..+.+-.. +....... ..++.. +..+++.|+-.. ...
T Consensus 228 ~~~~l~s~~~d--------~~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~p~~~~ll~~~~gs~------------d~~ 285 (401)
T 4aez_A 228 DGLQLASGGND--------NVVQIWDARSSIPKFTKTNHNAAV--KAVAWCPWQSNLLATGGGTM------------DKQ 285 (401)
T ss_dssp TSSEEEEEETT--------SCEEEEETTCSSEEEEECCCSSCC--CEEEECTTSTTEEEEECCTT------------TCE
T ss_pred CCCEEEEEeCC--------CeEEEccCCCCCccEEecCCcceE--EEEEECCCCCCEEEEecCCC------------CCE
Confidence 66777777765 358899988754322 11111111 122222 446777764221 147
Q ss_pred eEEEECCCCceeeccccccCCCCCCeEEEE-CCE-EEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCCCCcccCCC
Q 042957 216 AEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNR-LFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSST 293 (371)
Q Consensus 216 v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~ 293 (371)
+..||..+.+-...-... . ....++.. +++ +++.+|... +.+.+||..+.....+ ..+...
T Consensus 286 i~i~d~~~~~~~~~~~~~--~-~v~~~~~s~~~~~l~~~~g~~d---g~i~v~~~~~~~~~~~-----~~~~~h------ 348 (401)
T 4aez_A 286 IHFWNAATGARVNTVDAG--S-QVTSLIWSPHSKEIMSTHGFPD---NNLSIWSYSSSGLTKQ-----VDIPAH------ 348 (401)
T ss_dssp EEEEETTTCCEEEEEECS--S-CEEEEEECSSSSEEEEEECTTT---CEEEEEEEETTEEEEE-----EEEECC------
T ss_pred EEEEECCCCCEEEEEeCC--C-cEEEEEECCCCCeEEEEeecCC---CcEEEEecCCccceeE-----EEecCC------
Confidence 899999877543322211 1 11123322 344 444434322 2599999988777665 333211
Q ss_pred CCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 294 NTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 294 ~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
..+.......-++++++.|+.++ .|.+||+.+.
T Consensus 349 -------~~~v~~~~~s~dg~~l~s~~~dg---------~i~iw~~~~~ 381 (401)
T 4aez_A 349 -------DTRVLYSALSPDGRILSTAASDE---------NLKFWRVYDG 381 (401)
T ss_dssp -------SSCCCEEEECTTSSEEEEECTTS---------EEEEEECCC-
T ss_pred -------CCCEEEEEECCCCCEEEEEeCCC---------cEEEEECCCC
Confidence 01122222233667777777543 6788888765
No 67
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.89 E-value=0.18 Score=43.73 Aligned_cols=178 Identities=11% Similarity=0.036 Sum_probs=95.1
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+.+||+. .+...+.. +.. ...-++++.. ++.+|+.... ...+.+||+.
T Consensus 41 ~~v~~~~~~-~~~~~~~~-~~~----~~~~~~i~~~~~g~l~v~~~~-----------------------~~~v~~~d~~ 91 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEV-PTP----DAKVMCLIVSSLGDIWFTENG-----------------------ANKIGKLSKK 91 (300)
T ss_dssp TEEEEECTT-SCEEEEEC-SST----TCCEEEEEECTTSCEEEEETT-----------------------TTEEEEECTT
T ss_pred CeEEEECCC-CceEEEEC-CCC----CCcceeEEECCCCCEEEEecC-----------------------CCeEEEECCC
Confidence 458889988 66655431 110 0122345554 4678887432 2468899988
Q ss_pred CCeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCC-ceeeEEEE-ECCEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTL-RYKCVGVT-WQGKIH 193 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-~~~~~~~~-~~~~ly 193 (371)
+++...........-+.++.. ++++|+..... ..+.+||+. .+..... ++.. ..-..++. -+++||
T Consensus 92 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~ 160 (300)
T 2qc5_A 92 -GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG--------DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALW 160 (300)
T ss_dssp -SCEEEEECSSTTCCEEEEEECSTTCEEEEETTT--------TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEE
T ss_pred -CCeEEecCCCCCCCCccceECCCCCEEEEccCC--------CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEE
Confidence 666544321111222333333 67888874322 468889887 5555432 2211 12222233 356788
Q ss_pred EEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 194 VVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 194 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+.... ...+.+||+ +.+...+. ++.......+++.. ++.||+..... ..+.+||+ +..
T Consensus 161 v~~~~--------------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~----~~i~~~~~-~g~ 219 (300)
T 2qc5_A 161 FTENQ--------------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIMG----NKIGRITT-TGE 219 (300)
T ss_dssp EEETT--------------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT----TEEEEECT-TCC
T ss_pred EEecC--------------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccCC----CEEEEEcC-CCc
Confidence 86621 146888998 66665542 22111112234433 56888874322 25999999 556
Q ss_pred eEee
Q 042957 273 WDEV 276 (371)
Q Consensus 273 W~~~ 276 (371)
+...
T Consensus 220 ~~~~ 223 (300)
T 2qc5_A 220 ISEY 223 (300)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 68
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.88 E-value=0.1 Score=46.88 Aligned_cols=138 Identities=10% Similarity=0.000 Sum_probs=69.2
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT 187 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 187 (371)
..+..+|..+.+-...-.-...........-++++++.|+.+ ..+.+||..+..-...-.-..... ..++.
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d--------~~v~~wd~~~~~~~~~~~~h~~~v-~~v~~ 234 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD--------ASAKLWDVREGMCRQTFTGHESDI-NAICF 234 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTCSEEEEECCCSSCE-EEEEE
T ss_pred CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC--------CcEEEEECCCCeeEEEEcCCcCCE-EEEEE
Confidence 457788887775432211111111111112256788888775 358889988765332211111111 12222
Q ss_pred -ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCCccCeEEE
Q 042957 188 -WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGHIES 265 (371)
Q Consensus 188 -~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 265 (371)
-++++++.|+.+ ..+.+||+.+.+-...............++. -++++++.|+.+. .+.+
T Consensus 235 ~p~~~~l~s~s~d--------------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~----~i~v 296 (340)
T 1got_B 235 FPNGNAFATGSDD--------------ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF----NCNV 296 (340)
T ss_dssp CTTSSEEEEEETT--------------SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----EEEE
T ss_pred cCCCCEEEEEcCC--------------CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC----eEEE
Confidence 256677777643 4688899987653222111111111112222 2567777776554 4999
Q ss_pred EeCCCCc
Q 042957 266 YDGELNM 272 (371)
Q Consensus 266 yd~~~~~ 272 (371)
||..+..
T Consensus 297 wd~~~~~ 303 (340)
T 1got_B 297 WDALKAD 303 (340)
T ss_dssp EETTTCC
T ss_pred EEcccCc
Confidence 9987643
No 69
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.84 E-value=0.18 Score=43.35 Aligned_cols=237 Identities=8% Similarity=-0.069 Sum_probs=120.0
Q ss_pred ccceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 37 SNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 37 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
...++.||+.+++...+.... ..-.+++.. +++.+++++ ...++++|.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~------------------------~~~i~~~d~ 69 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-------ELFEAPNWSPDGKYLLLNS------------------------EGLLYRLSL 69 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-------SCCEEEEECTTSSEEEEEE------------------------TTEEEEEES
T ss_pred ceeEEEEeCCCCceeeeccCC-------cceEeeEECCCCCEEEEEc------------------------CCeEEEEeC
Confidence 367999999988866543322 122234443 455555543 136899999
Q ss_pred CC-CeeeecCCCCC-CCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE-ECCE-
Q 042957 116 KS-NEWTRCAPLSV-PRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT-WQGK- 191 (371)
Q Consensus 116 ~~-~~W~~~~~~~~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~~- 191 (371)
.+ .+...+..... .........-+++.+++++... .....++.++..+..-+.+..... ...++. -+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~ 142 (297)
T 2ojh_A 70 AGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVE----FGKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKS 142 (297)
T ss_dssp SSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTT----TSSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSE
T ss_pred CCCCCceEeccccccccccceEECCCCCEEEEEEeCC----CCcceEEEEECCCCceEEeecCCC---ccceEECCCCCE
Confidence 88 77666553332 2222223333565555555321 124678999988777665543222 122222 2444
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCE-EEEEcCCCCCccCeEEEEeCC
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNR-LFSSGDCLKAWKGHIESYDGE 269 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~yd~~ 269 (371)
|++.+.... ...++.+|..+.....+...... ...++.. +++ |++.+.... ...++.++..
T Consensus 143 l~~~~~~~~------------~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~--~~~i~~~~~~ 205 (297)
T 2ojh_A 143 FTYCGIRDQ------------VFDIYSMDIDSGVETRLTHGEGR---NDGPDYSPDGRWIYFNSSRTG--QMQIWRVRVD 205 (297)
T ss_dssp EEEEEEETT------------EEEEEEEETTTCCEEECCCSSSC---EEEEEECTTSSEEEEEECTTS--SCEEEEEETT
T ss_pred EEEEECCCC------------ceEEEEEECCCCcceEcccCCCc---cccceECCCCCEEEEEecCCC--CccEEEECCC
Confidence 554454321 12566777777766555432211 1122222 444 444433222 2458888877
Q ss_pred CCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeeccc--ccceeeEEEEeeccccccccc
Q 042957 270 LNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGE--LARTMSMVHIFDTAAKSDAWR 347 (371)
Q Consensus 270 ~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~--~~~~~~~v~~~d~~~~~~~W~ 347 (371)
......+ ..-. .........-+++.+++++...... .......+++||+++. +..
T Consensus 206 ~~~~~~~-----~~~~----------------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~ 262 (297)
T 2ojh_A 206 GSSVERI-----TDSA----------------YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG--NVE 262 (297)
T ss_dssp SSCEEEC-----CCCS----------------EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC--SCE
T ss_pred CCCcEEE-----ecCC----------------cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC--Cce
Confidence 7766666 2111 0111122223566556555432110 0013467999999876 555
Q ss_pred ccCc
Q 042957 348 SFEP 351 (371)
Q Consensus 348 ~~~~ 351 (371)
.+..
T Consensus 263 ~~~~ 266 (297)
T 2ojh_A 263 TLFD 266 (297)
T ss_dssp EEEE
T ss_pred eeec
Confidence 4443
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.2 Score=45.65 Aligned_cols=136 Identities=13% Similarity=-0.040 Sum_probs=66.0
Q ss_pred ceEEEEECCCCeeeecCCCCCCC---------------CCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPR---------------YDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP 172 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r---------------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~ 172 (371)
..+..||..+.+-...-...... .......-++. +++|+.+ ..+.+||..+.+-..
T Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------g~i~~~d~~~~~~~~ 241 (425)
T 1r5m_A 171 NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK--------GAIFVYQITEKTPTG 241 (425)
T ss_dssp CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECGG--------GCEEEEETTCSSCSE
T ss_pred CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC--------CeEEEEEcCCCceee
Confidence 45778888776643322211111 22222233444 5666654 368899988753221
Q ss_pred CCCCCCCceeeEEE-EECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEE
Q 042957 173 LPNMSTLRYKCVGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFS 251 (371)
Q Consensus 173 ~~~~p~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv 251 (371)
.-....... ..++ .-++++++.++.. ..+.+||..+.+-...- .........++...+.+++
T Consensus 242 ~~~~~~~~i-~~~~~~~~~~~l~~~~~d--------------~~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~l~ 304 (425)
T 1r5m_A 242 KLIGHHGPI-SVLEFNDTNKLLLSASDD--------------GTLRIWHGGNGNSQNCF--YGHSQSIVSASWVGDDKVI 304 (425)
T ss_dssp EECCCSSCE-EEEEEETTTTEEEEEETT--------------SCEEEECSSSBSCSEEE--CCCSSCEEEEEEETTTEEE
T ss_pred eeccCCCce-EEEEECCCCCEEEEEcCC--------------CEEEEEECCCCccceEe--cCCCccEEEEEECCCCEEE
Confidence 111111111 1222 2355566666533 46788998775432221 1111111234444333666
Q ss_pred EcCCCCCccCeEEEEeCCCCce
Q 042957 252 SGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 252 ~GG~~~~~~~~~~~yd~~~~~W 273 (371)
.++... .+.+||+.+.+-
T Consensus 305 ~~~~d~----~i~i~d~~~~~~ 322 (425)
T 1r5m_A 305 SCSMDG----SVRLWSLKQNTL 322 (425)
T ss_dssp EEETTS----EEEEEETTTTEE
T ss_pred EEeCCC----cEEEEECCCCcE
Confidence 665444 599999987653
No 71
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.031 Score=56.67 Aligned_cols=236 Identities=8% Similarity=0.033 Sum_probs=120.4
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE-C--CEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-G--DSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
.+..||...+++..+..+.. |...-.+++.. + +..++.|+.+ ..+..+|.
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~----h~~~V~~l~~s~~~~~~~l~s~s~D-----------------------g~I~vwd~ 84 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTG----HEGPVWRVDWAHPKFGTILASCSYD-----------------------GKVLIWKE 84 (753)
T ss_dssp EEEEEEEETTEEEEEEEECC----CSSCEEEEEECCTTSCSEEEEEETT-----------------------SCEEEEEE
T ss_pred cEEEEecCCCCCccceeccC----CcCceEEEEecCCCCCCEEEEEeCC-----------------------CeEEEEEC
Confidence 47888887777666544431 22222344442 3 5677777663 45788888
Q ss_pred CCCeeeecCCCCCCCCCeeEEEE--C--CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC---CCCCCCceeeEEEEE
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVC--D--NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL---PNMSTLRYKCVGVTW 188 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~---~~~p~~~~~~~~~~~ 188 (371)
.+++|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+..-... ...+... ..++..
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~~~~~~~~~~~~~~~v--~~l~~~ 154 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--------GKVSVVEFKENGTTSPIIIDAHAIGV--NSASWA 154 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEECCSSSCCCCEEEECCSSCE--EEEEEC
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC--------CcEEEEEeecCCCcceeEeecCCCce--EEEEec
Confidence 88887665544322222222222 3 6677787765 3688888876532111 1111111 111111
Q ss_pred --------------CCEEEEEecccCCCCCCCCccccccCeeEEEECCCC--ceeeccccccCCCCCCeEEEE-C---CE
Q 042957 189 --------------QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG--KWDLVARMWQLDIPPNQIVEV-D---NR 248 (371)
Q Consensus 189 --------------~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~-~---~~ 248 (371)
++.+++.|+.+ ..+.+||..+. .+..+..+..-.....+++.. + ++
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~d--------------g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~ 220 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGAD--------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 220 (753)
T ss_dssp CCC---------CGGGCCEEEEETT--------------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred CcccccccccccCCCCCEEEEEECC--------------CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC
Confidence 35666666543 35778887654 344333332211111123332 3 67
Q ss_pred EEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeeccccc
Q 042957 249 LFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELA 328 (371)
Q Consensus 249 iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~ 328 (371)
+++.|+..+ .+.+||+.+..=.... ........ ..........-++++++.||.++
T Consensus 221 ~l~s~s~Dg----~I~iwd~~~~~~~~~~--~~~~~~~~-------------~~~v~~l~~spdg~~l~s~s~Dg----- 276 (753)
T 3jro_A 221 YLASVSQDR----TCIIWTQDNEQGPWKK--TLLKEEKF-------------PDVLWRASWSLSGNVLALSGGDN----- 276 (753)
T ss_dssp EEEEEESSS----CEEEEEESSSSSCCBC--CBSSSSCC-------------SSCCCCEEECTTTCCEEEECSSS-----
T ss_pred EEEEEecCC----EEEEecCCCCCCccee--EEeccCCC-------------CCceEEEEEcCCCCEEEEEcCCC-----
Confidence 888877655 4899988775311110 00111000 00111112223567777776543
Q ss_pred ceeeEEEEeecccccccccccCcccc
Q 042957 329 RTMSMVHIFDTAAKSDAWRSFEPIVE 354 (371)
Q Consensus 329 ~~~~~v~~~d~~~~~~~W~~~~~~p~ 354 (371)
.|.+||.+.. .+|..+..+..
T Consensus 277 ----~I~vwd~~~~-~~~~~~~~~~~ 297 (753)
T 3jro_A 277 ----KVTLWKENLE-GKWEPAGEVHQ 297 (753)
T ss_dssp ----CEECCBCCSS-SCCBCCCCBC-
T ss_pred ----EEEEEecCCC-CCccccccccc
Confidence 5778888754 37888876654
No 72
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.76 E-value=0.32 Score=49.24 Aligned_cols=180 Identities=11% Similarity=0.002 Sum_probs=97.2
Q ss_pred eeEEeCCCCceeccCCCC-----cccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEE
Q 042957 40 LASYNPSNNTWSHVSHIP-----DLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRY 113 (371)
Q Consensus 40 ~~~yd~~~~~W~~~~~~~-----~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 113 (371)
+.+||+.+..+..+...+ ... ....-.+++.. ++.|||-. . ..-+.+|
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~v~~i~~d~~g~lWigt-~-----------------------~~Gl~~~ 388 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSL--SNKVVSSVCDDGQGKLWIGT-D-----------------------GGGINVF 388 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCC--SSSCEEEEEECTTSCEEEEE-B-----------------------SSCEEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCC--CCcceEEEEEcCCCCEEEEe-C-----------------------CCcEEEE
Confidence 788898888776654321 100 01122244444 36788652 1 1237888
Q ss_pred ECCCCeeeecCCC-CCCCCC-eeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCC--CCCceeeEEEEE
Q 042957 114 NVKSNEWTRCAPL-SVPRYD-FACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNM--STLRYKCVGVTW 188 (371)
Q Consensus 114 d~~~~~W~~~~~~-~~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~--p~~~~~~~~~~~ 188 (371)
|+.+++++..... ..+... .+++.. ++.|++ |... .-+.+||+.+++++..... +.... .+++..
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~--------~Gl~~~~~~~~~~~~~~~~~~~~~~v-~~i~~d 458 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYL--------GNISYYNTRLKKFQIIELEKNELLDV-RVFYED 458 (781)
T ss_dssp ETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETT--------EEEEEECSSSCEEEECCSTTTCCCCE-EEEEEC
T ss_pred ECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eecc--------CCEEEEcCCCCcEEEeccCCCCCCeE-EEEEEC
Confidence 8887777665311 111111 222222 567776 3321 3588999999998887532 22221 222222
Q ss_pred -CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCC---CCCCeEEE-ECCEEEEEcCCCCCccCeE
Q 042957 189 -QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLD---IPPNQIVE-VDNRLFSSGDCLKAWKGHI 263 (371)
Q Consensus 189 -~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~---~~~~~~~~-~~~~iyv~GG~~~~~~~~~ 263 (371)
++.|++... ..+.+||+.+++|+......... ....+++. -++.|++-. ... .+
T Consensus 459 ~~g~lwigt~----------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~~----Gl 517 (781)
T 3v9f_A 459 KNKKIWIGTH----------------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT-FGG----GV 517 (781)
T ss_dssp TTSEEEEEET----------------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE-SSS----CE
T ss_pred CCCCEEEEEC----------------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE-cCC----CE
Confidence 577887541 35889999999887764332111 11112222 256677642 112 39
Q ss_pred EEEeCCCCceEee
Q 042957 264 ESYDGELNMWDEV 276 (371)
Q Consensus 264 ~~yd~~~~~W~~~ 276 (371)
.+||+.+++++..
T Consensus 518 ~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 518 GIYTPDMQLVRKF 530 (781)
T ss_dssp EEECTTCCEEEEE
T ss_pred EEEeCCCCeEEEc
Confidence 9999999999887
No 73
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.76 E-value=0.24 Score=42.96 Aligned_cols=142 Identities=13% Similarity=0.089 Sum_probs=74.4
Q ss_pred ceEEEEECCCCeeeecCCCC--CC--CCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCce
Q 042957 108 AWVLRYNVKSNEWTRCAPLS--VP--RYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRY 181 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~--~~--r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~ 181 (371)
..+.+||+.......+.... .. ..-..++. -+++||+.+... ...+.+||.....-..+..... ..
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-------~~~i~~~d~~g~~~~~~~~~~~-~~ 122 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-------THQIQIYNQYGQFVRKFGATIL-QH 122 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-------GCEEEEECTTSCEEEEECTTTC-SC
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-------CCEEEEECCCCcEEEEecCccC-CC
Confidence 56888998755444443211 11 12234444 268999886421 2468889855443333322111 11
Q ss_pred eeEEEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCc
Q 042957 182 KCVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAW 259 (371)
Q Consensus 182 ~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~ 259 (371)
-..+++ -+++||+..... ..+.+||+.......+....... ...+++.. +++||+.....
T Consensus 123 ~~~i~~~~~g~l~v~~~~~--------------~~i~~~~~~g~~~~~~~~~~~~~-~p~~i~~~~~g~l~v~~~~~--- 184 (286)
T 1q7f_A 123 PRGVTVDNKGRIIVVECKV--------------MRVIIFDQNGNVLHKFGCSKHLE-FPNGVVVNDKQEIFISDNRA--- 184 (286)
T ss_dssp EEEEEECTTSCEEEEETTT--------------TEEEEECTTSCEEEEEECTTTCS-SEEEEEECSSSEEEEEEGGG---
T ss_pred ceEEEEeCCCCEEEEECCC--------------CEEEEEcCCCCEEEEeCCCCccC-CcEEEEECCCCCEEEEECCC---
Confidence 122333 367898876321 46888997655444332111111 12234443 57888875433
Q ss_pred cCeEEEEeCCCCceEee
Q 042957 260 KGHIESYDGELNMWDEV 276 (371)
Q Consensus 260 ~~~~~~yd~~~~~W~~~ 276 (371)
..+.+||+.......+
T Consensus 185 -~~i~~~~~~g~~~~~~ 200 (286)
T 1q7f_A 185 -HCVKVFNYEGQYLRQI 200 (286)
T ss_dssp -TEEEEEETTCCEEEEE
T ss_pred -CEEEEEcCCCCEEEEE
Confidence 3599999977655555
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.75 E-value=0.37 Score=45.02 Aligned_cols=145 Identities=10% Similarity=0.088 Sum_probs=77.9
Q ss_pred ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeE
Q 042957 138 CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAE 217 (371)
Q Consensus 138 ~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~ 217 (371)
.++.+++.|+.+ ..+.+||..+.+-...-..............+++.++.|+.+ ..+.
T Consensus 278 ~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d--------------g~i~ 335 (464)
T 3v7d_B 278 GHGNIVVSGSYD--------NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD--------------TTIR 335 (464)
T ss_dssp EETTEEEEEETT--------SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT--------------SCEE
T ss_pred CCCCEEEEEeCC--------CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC--------------CcEE
Confidence 355566676664 358899988765432211111111112222355566666533 4688
Q ss_pred EEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCC
Q 042957 218 VYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTED 297 (371)
Q Consensus 218 ~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~ 297 (371)
+||+.+.+-.. .+..... .......++..++.|+.++ .+.+||+.+..-... ....
T Consensus 336 vwd~~~~~~~~--~~~~h~~-~v~~~~~~~~~l~s~s~dg----~v~vwd~~~~~~~~~-----~~~~------------ 391 (464)
T 3v7d_B 336 IWDLENGELMY--TLQGHTA-LVGLLRLSDKFLVSAAADG----SIRGWDANDYSRKFS-----YHHT------------ 391 (464)
T ss_dssp EEETTTTEEEE--EECCCSS-CEEEEEECSSEEEEEETTS----EEEEEETTTCCEEEE-----EECT------------
T ss_pred EEECCCCcEEE--EEeCCCC-cEEEEEEcCCEEEEEeCCC----cEEEEECCCCceeee-----ecCC------------
Confidence 99998875322 2211111 1133445667777776554 499999987543222 1111
Q ss_pred CCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 298 WPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 298 ~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
..........++++++.|+ + ..|.+||.++.
T Consensus 392 ----~~~~~~~~~~~~~~l~~~~-d---------g~i~iwd~~~g 422 (464)
T 3v7d_B 392 ----NLSAITTFYVSDNILVSGS-E---------NQFNIYNLRSG 422 (464)
T ss_dssp ----TCCCEEEEEECSSEEEEEE-T---------TEEEEEETTTC
T ss_pred ----CCccEEEEEeCCCEEEEec-C---------CeEEEEECCCC
Confidence 1222334455777777765 2 26889998876
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.72 E-value=0.21 Score=45.87 Aligned_cols=176 Identities=10% Similarity=-0.031 Sum_probs=86.7
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+..||..+.+-...- . .|...-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 119 g~i~iwd~~~~~~~~~~--~----~h~~~v~~~~~~~~~~~l~s~s~d-----------------------~~i~iwd~~ 169 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREID--Q----AHVSEITKLKFFPSGEALISSSQD-----------------------MQLKIWSVK 169 (420)
T ss_dssp SCEEEECTTSCEEEEET--T----SSSSCEEEEEECTTSSEEEEEETT-----------------------SEEEEEETT
T ss_pred CCEEEEeCCCcceeeec--c----cccCccEEEEECCCCCEEEEEeCC-----------------------CeEEEEeCC
Confidence 34778887766533321 1 122223344444 45666666653 468888887
Q ss_pred CCeeeecCCCCCCCCC-eeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCC-CCcee-eEEE------
Q 042957 117 SNEWTRCAPLSVPRYD-FACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMS-TLRYK-CVGV------ 186 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~~~~-~~~~------ 186 (371)
+.+-.. .+...... .+++. -+++.++.|+.+ ..+.+||..+.+-...-... ..... ..++
T Consensus 170 ~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (420)
T 3vl1_A 170 DGSNPR--TLIGHRATVTDIAIIDRGRNVLSASLD--------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTD 239 (420)
T ss_dssp TCCCCE--EEECCSSCEEEEEEETTTTEEEEEETT--------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCC
T ss_pred CCcCce--EEcCCCCcEEEEEEcCCCCEEEEEcCC--------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCc
Confidence 654211 11111111 12222 256666677765 35888898876433221110 00000 1111
Q ss_pred ----------------EECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCC-CCCeEEEE-CCE
Q 042957 187 ----------------TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDI-PPNQIVEV-DNR 248 (371)
Q Consensus 187 ----------------~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~-~~~~~~~~-~~~ 248 (371)
.-++++++.|+.. ..+.+||+.+.+-.... ..... ....++.. ++.
T Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------------g~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~ 303 (420)
T 3vl1_A 240 RQLHEISTSKKNNLEFGTYGKYVIAGHVS--------------GVITVHNVFSKEQTIQL--PSKFTCSCNSLTVDGNNA 303 (420)
T ss_dssp SSCGGGCCCCCCTTCSSCTTEEEEEEETT--------------SCEEEEETTTCCEEEEE--CCTTSSCEEEEEECSSCT
T ss_pred ceeeecccCcccceEEcCCCCEEEEEcCC--------------CeEEEEECCCCceeEEc--ccccCCCceeEEEeCCCC
Confidence 1256666666533 46889999876532221 11111 11123332 344
Q ss_pred -EEEEcCCCCCccCeEEEEeCCCCc
Q 042957 249 -LFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 249 -iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+++.|+... .+.+||+.+..
T Consensus 304 ~~l~~g~~dg----~i~vwd~~~~~ 324 (420)
T 3vl1_A 304 NYIYAGYENG----MLAQWDLRSPE 324 (420)
T ss_dssp TEEEEEETTS----EEEEEETTCTT
T ss_pred CEEEEEeCCC----eEEEEEcCCCc
Confidence 777776554 49999998753
No 76
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.71 E-value=0.15 Score=45.61 Aligned_cols=135 Identities=12% Similarity=0.080 Sum_probs=68.6
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEE-EECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe-CCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACT-VCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP-LPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~~~~~~~ 185 (371)
..+..||..+.+-...-... ...-.+++ .-+++.++.|+.+ ..+.+||..+.+-.. +..-..+.. ...
T Consensus 144 g~v~i~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~lasg~~d--------g~i~iwd~~~~~~~~~~~~h~~~v~-~l~ 213 (321)
T 3ow8_A 144 GKVNIFGVESGKKEYSLDTR-GKFILSIAYSPDGKYLASGAID--------GIINIFDIATGKLLHTLEGHAMPIR-SLT 213 (321)
T ss_dssp SEEEEEETTTCSEEEEEECS-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTEEEEEECCCSSCCC-EEE
T ss_pred CcEEEEEcCCCceeEEecCC-CceEEEEEECCCCCEEEEEcCC--------CeEEEEECCCCcEEEEEcccCCcee-EEE
Confidence 45777777665432111101 11111122 2267777777765 358899988765322 221111111 111
Q ss_pred EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEE
Q 042957 186 VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 264 (371)
..-++++++.|+.+ ..+.+||..+...... +..-......++.. +++.++.|+.+. .+.
T Consensus 214 ~spd~~~l~s~s~d--------------g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~----~v~ 273 (321)
T 3ow8_A 214 FSPDSQLLVTASDD--------------GYIKIYDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDK----SVK 273 (321)
T ss_dssp ECTTSCEEEEECTT--------------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS----CEE
T ss_pred EcCCCCEEEEEcCC--------------CeEEEEECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCC----cEE
Confidence 22366777777543 4688899987654322 11111111123322 566777777655 499
Q ss_pred EEeCCCCc
Q 042957 265 SYDGELNM 272 (371)
Q Consensus 265 ~yd~~~~~ 272 (371)
+||+.+.+
T Consensus 274 iwd~~~~~ 281 (321)
T 3ow8_A 274 VWDVGTRT 281 (321)
T ss_dssp EEETTTTE
T ss_pred EEeCCCCE
Confidence 99998754
No 77
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.70 E-value=0.048 Score=48.52 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=70.7
Q ss_pred eEEEEECCCCeeeecCCCCCCCCCeeEEEE-CC-EEEEEcCCCCCCCCCCCce-EEEEeCCCCc-eEeC--CCCCCCcee
Q 042957 109 WVLRYNVKSNEWTRCAPLSVPRYDFACTVC-DN-KIYVAGGKSNLFSAKGTAS-AEVYHPELDQ-WTPL--PNMSTLRYK 182 (371)
Q Consensus 109 ~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~-~~~yd~~t~~-W~~~--~~~p~~~~~ 182 (371)
.++++|..+++-...-+. ...-+.++.. ++ .||+.+... .. +.+|+...+. .... ..++.....
T Consensus 109 ~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~--------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 178 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSS--------ANTVRRFKIDADGVLFDTGQEFISGGTRP 178 (331)
T ss_dssp EEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETT--------TTEEEEEEECTTCCEEEEEEEEECSSSSE
T ss_pred cEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCC--------CceEEEEEECCCCcEeecCCccccCCCCc
Confidence 799999988876443221 1111333332 44 577775432 23 6666654321 1000 011112222
Q ss_pred eEEEE-ECC-EEEEEecccCCCCCCCCccccccCeeEEEECCCCce-eeccccccCCCCCCeEEEE-CC-EEEEEcCCCC
Q 042957 183 CVGVT-WQG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKW-DLVARMWQLDIPPNQIVEV-DN-RLFSSGDCLK 257 (371)
Q Consensus 183 ~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~ 257 (371)
..++. -++ .||+.+.. ...+.+||+.+.+. ..+..++..... ..++.. ++ .||+.....
T Consensus 179 ~~~~~spdg~~l~v~~~~--------------~~~v~v~d~~~~~~~~~~~~~~~~~~~-~~~~~spdg~~l~v~~~~~- 242 (331)
T 3u4y_A 179 FNITFTPDGNFAFVANLI--------------GNSIGILETQNPENITLLNAVGTNNLP-GTIVVSRDGSTVYVLTEST- 242 (331)
T ss_dssp EEEEECTTSSEEEEEETT--------------TTEEEEEECSSTTSCEEEEEEECSSCC-CCEEECTTSSEEEEECSSE-
T ss_pred cceEECCCCCEEEEEeCC--------------CCeEEEEECCCCcccceeeeccCCCCC-ceEEECCCCCEEEEEEcCC-
Confidence 22232 244 47777632 25789999988765 113233322222 234443 44 477765432
Q ss_pred CccCeEEEEeCCCCceEee
Q 042957 258 AWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 258 ~~~~~~~~yd~~~~~W~~~ 276 (371)
+.+.+||+++.+.+.+
T Consensus 243 ---~~i~~~d~~~~~~~~~ 258 (331)
T 3u4y_A 243 ---VDVFNFNQLSGTLSFV 258 (331)
T ss_dssp ---EEEEEEETTTTEEEEE
T ss_pred ---CEEEEEECCCCceeee
Confidence 2499999999888665
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.69 E-value=0.081 Score=53.51 Aligned_cols=178 Identities=7% Similarity=-0.058 Sum_probs=88.8
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+..||..+++....-.. |...-.+++.. ++..++.|+.+ ..+.+||..
T Consensus 35 g~v~iwd~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~d-----------------------g~i~vw~~~ 85 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQV------TETPVRAGKFIARKNWIIVGSDD-----------------------FRIRVFNYN 85 (814)
T ss_dssp SEEEEEETTTTEEEEEEEC------CSSCEEEEEEEGGGTEEEEEETT-----------------------SEEEEEETT
T ss_pred CEEEEEECCCCceEEEEec------CCCcEEEEEEeCCCCEEEEEeCC-----------------------CeEEEEECC
Confidence 3588899877653322111 11112234433 45666666653 568888887
Q ss_pred CCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC-ceEeCCCCCCCceeeEEEEE--CCEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD-QWTPLPNMSTLRYKCVGVTW--QGKIH 193 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~~~~~~~~~~--~~~ly 193 (371)
+++....-.............-++..++.|+.+ ..+.+||..++ .....-.-. ...-..++.. ++.++
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~vw~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD--------LTVKLWNWENNWALEQTFEGH-EHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETT--------SEEEEEEGGGTSEEEEEEECC-SSCEEEEEEETTEEEEE
T ss_pred CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC--------CEEEEEECCCCceEEEEEcCC-CCcEEEEEEEcCCCCEE
Confidence 776533211111111111222255556666654 36888888765 222211101 1111222233 45677
Q ss_pred EEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE---CCEEEEEcCCCCCccCeEEEEeCCC
Q 042957 194 VVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV---DNRLFSSGDCLKAWKGHIESYDGEL 270 (371)
Q Consensus 194 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~yd~~~ 270 (371)
+.|+.+ ..+.+||+.+..-......... .....++.. ++.++++|+... .+.+||..+
T Consensus 157 ~~~~~d--------------g~v~vwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~dg----~i~~~d~~~ 217 (814)
T 3mkq_A 157 ASGCLD--------------RTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDDL----TIKIWDYQT 217 (814)
T ss_dssp EEEETT--------------SEEEEEETTCSSCSEEEECCCT-TCCCEEEECCSTTCCEEEEECTTS----EEEEEETTT
T ss_pred EEEeCC--------------CeEEEEECCCCcceeEEecCCC-CCEEEEEEEECCCCCEEEEEeCCC----EEEEEECCC
Confidence 776543 4688899876543222111111 112233332 667777777554 499999887
Q ss_pred Cc
Q 042957 271 NM 272 (371)
Q Consensus 271 ~~ 272 (371)
..
T Consensus 218 ~~ 219 (814)
T 3mkq_A 218 KS 219 (814)
T ss_dssp TE
T ss_pred Cc
Confidence 65
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.67 E-value=0.1 Score=46.33 Aligned_cols=179 Identities=7% Similarity=-0.089 Sum_probs=89.5
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CC-EEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GD-SVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+..||+.+++.......+. ... .++.. ++ .+|+.+.. ...++++|+
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~------~~~-~~~~s~dg~~l~~~~~~-----------------------~~~i~~~d~ 69 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGY------DFV-DTAITSDCSNVVVTSDF-----------------------CQTLVQIET 69 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCC------CEE-EEEECSSSCEEEEEEST-----------------------TCEEEEEEC
T ss_pred CeEEEEeCcccceeeeEEccC------Ccc-eEEEcCCCCEEEEEeCC-----------------------CCeEEEEEC
Confidence 468999999988765443331 111 33333 44 57777553 247899999
Q ss_pred CCCee-e-ecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-CC-E
Q 042957 116 KSNEW-T-RCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-QG-K 191 (371)
Q Consensus 116 ~~~~W-~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~-~ 191 (371)
.+++- . .+.....++...+...-+..|| ++.... ....+.+||..+.+....- +.......++.. ++ .
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~-----~~~~i~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~ 141 (331)
T 3u4y_A 70 QLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTGLN-----HPFNMQSYSFLKNKFISTI--PIPYDAVGIAISPNGNG 141 (331)
T ss_dssp SSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCCSS-----SSCEEEEEETTTTEEEEEE--ECCTTEEEEEECTTSSC
T ss_pred CCCceeEEecccCCCCccceEECCCCCEEE-EecCCC-----CcccEEEEECCCCCeEEEE--ECCCCccceEECCCCCE
Confidence 88764 2 2222122221111111244566 433221 1237999999887654432 222222333332 44 4
Q ss_pred EEEEecccCCCCCCCCccccccCe-eEEEECCCCc-eeec--cccccCCCCCCeEEEE-CC-EEEEEcCCCCCccCeEEE
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSS-AEVYDTQAGK-WDLV--ARMWQLDIPPNQIVEV-DN-RLFSSGDCLKAWKGHIES 265 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~-v~~yd~~t~~-W~~~--~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~ 265 (371)
||+.+... .. +.+|+...+. .... ..++. ......++.. ++ .+|+.+... +.+.+
T Consensus 142 l~~~~~~~--------------~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~----~~v~v 202 (331)
T 3u4y_A 142 LILIDRSS--------------ANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLIG----NSIGI 202 (331)
T ss_dssp EEEEEETT--------------TTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETTT----TEEEE
T ss_pred EEEEecCC--------------CceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCCC----CeEEE
Confidence 77776422 24 6677765432 1111 11111 1111233333 34 477775433 35999
Q ss_pred EeCCCCce
Q 042957 266 YDGELNMW 273 (371)
Q Consensus 266 yd~~~~~W 273 (371)
||+++.+.
T Consensus 203 ~d~~~~~~ 210 (331)
T 3u4y_A 203 LETQNPEN 210 (331)
T ss_dssp EECSSTTS
T ss_pred EECCCCcc
Confidence 99987765
No 80
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.33 Score=45.41 Aligned_cols=96 Identities=9% Similarity=0.020 Sum_probs=51.0
Q ss_pred ceEEEEECCCCeeee--cCCCCC--CCCCeeEEEEC---CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC--CCCCC
Q 042957 108 AWVLRYNVKSNEWTR--CAPLSV--PRYDFACTVCD---NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL--PNMST 178 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~--~~~~~~--~r~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~ 178 (371)
..++.++..+.+... ...+.. .........-+ +++++.|+.+ ..+.+||..+.+.... ..-..
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d--------~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD--------EHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT--------SCEEEEEESCTTCEEEECCCCSS
T ss_pred CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC--------CcEEEEECCCCceeeeeecCCCC
Confidence 457888876654332 111111 11112223346 7788888775 3588898877653321 11111
Q ss_pred CceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCcee
Q 042957 179 LRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWD 227 (371)
Q Consensus 179 ~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~ 227 (371)
... ..... ++++++.|+.+ ..+.+||+.+.+..
T Consensus 243 ~v~-~~~~s-d~~~l~s~~~d--------------~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 243 FVS-SICCG-KDYLLLSAGGD--------------DKIFAWDWKTGKNL 275 (450)
T ss_dssp CEE-EEEEC-STTEEEEEESS--------------SEEEEEETTTCCEE
T ss_pred ceE-EEEEC-CCCEEEEEeCC--------------CeEEEEECCCCcEe
Confidence 111 12223 67777777633 47889999887643
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.65 E-value=0.43 Score=44.51 Aligned_cols=137 Identities=9% Similarity=0.030 Sum_probs=72.5
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT 187 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 187 (371)
..+..||..+.+-...-..............++..++.|+.+ ..+.+||..+.+-... +.........+.
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~--~~~h~~~v~~~~ 359 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD--------TTIRIWDLENGELMYT--LQGHTALVGLLR 359 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT--------SCEEEEETTTTEEEEE--ECCCSSCEEEEE
T ss_pred CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC--------CcEEEEECCCCcEEEE--EeCCCCcEEEEE
Confidence 458888887765432211111111122222356667777765 3588999887643221 211112222334
Q ss_pred ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEe
Q 042957 188 WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYD 267 (371)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd 267 (371)
.+++.++.|+.+ ..+.+||+.+..-.... .............++++++.|+ .+ .+.+||
T Consensus 360 ~~~~~l~s~s~d--------------g~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~-dg----~i~iwd 418 (464)
T 3v7d_B 360 LSDKFLVSAAAD--------------GSIRGWDANDYSRKFSY--HHTNLSAITTFYVSDNILVSGS-EN----QFNIYN 418 (464)
T ss_dssp ECSSEEEEEETT--------------SEEEEEETTTCCEEEEE--ECTTCCCEEEEEECSSEEEEEE-TT----EEEEEE
T ss_pred EcCCEEEEEeCC--------------CcEEEEECCCCceeeee--cCCCCccEEEEEeCCCEEEEec-CC----eEEEEE
Confidence 456666666533 47889999876532222 1111112223445777777766 32 599999
Q ss_pred CCCCceEe
Q 042957 268 GELNMWDE 275 (371)
Q Consensus 268 ~~~~~W~~ 275 (371)
.++.+-..
T Consensus 419 ~~~g~~~~ 426 (464)
T 3v7d_B 419 LRSGKLVH 426 (464)
T ss_dssp TTTCCEEE
T ss_pred CCCCcEEe
Confidence 99876543
No 82
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.63 E-value=0.12 Score=46.59 Aligned_cols=99 Identities=11% Similarity=0.064 Sum_probs=49.5
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CC-EEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GD-SVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
-.++.+|+.+.+...+... ... .+ ..++.. ++ .||+..... .....-.+|.++.
T Consensus 29 i~~~~~d~~~g~~~~~~~~-~~~--~p---~~l~~spdg~~l~~~~~~~------------------~~~~~v~~~~~~~ 84 (361)
T 3scy_A 29 IYTFRFNEETGESLPLSDA-EVA--NP---SYLIPSADGKFVYSVNEFS------------------KDQAAVSAFAFDK 84 (361)
T ss_dssp EEEEEEETTTCCEEEEEEE-ECS--CC---CSEEECTTSSEEEEEECCS------------------STTCEEEEEEEET
T ss_pred EEEEEEeCCCCCEEEeecc-cCC--CC---ceEEECCCCCEEEEEEccC------------------CCCCcEEEEEEeC
Confidence 3467778888887776543 111 11 123333 34 577665431 0011233466666
Q ss_pred CCCeeeecCCCCCCC-CCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC
Q 042957 116 KSNEWTRCAPLSVPR-YDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD 168 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 168 (371)
.+++.+.+...+... .-..++.-+..||+.... ...+.+|+..++
T Consensus 85 ~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~--------~~~v~~~~~~~~ 130 (361)
T 3scy_A 85 EKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYS--------GGSITVFPIGQD 130 (361)
T ss_dssp TTTEEEEEEEEECSSSCEEEEEECSSEEEEEETT--------TTEEEEEEBCTT
T ss_pred CCCcEEEeeEeccCCCCcEEEEECCCEEEEEECC--------CCEEEEEEeCCC
Confidence 667777665443222 222333333456665432 246788887643
No 83
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.63 E-value=0.12 Score=45.59 Aligned_cols=137 Identities=11% Similarity=0.096 Sum_probs=68.4
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~ 186 (371)
..+..+|..+.+....-....... ..++. -++++++.|+.+ ..+.+||..+.+-...-.-..........
T Consensus 45 g~i~iw~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~d--------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~ 115 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTISGHKLGI-SDVAWSSDSNLLVSASDD--------KTLKIWDVSSGKCLKTLKGHSNYVFCCNF 115 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCE-EEEEECTTSSEEEEEETT--------SEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CeEEEEeCCCcccchhhccCCCce-EEEEEcCCCCEEEEECCC--------CEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 346677776665543211111111 11222 256777777765 36889998876533211101111111111
Q ss_pred EECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEE
Q 042957 187 TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIES 265 (371)
Q Consensus 187 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~ 265 (371)
.-++++++.|+.+ ..+.+||+++.+-... +.........++.. ++++++.|+..+ .+.+
T Consensus 116 ~~~~~~l~s~~~d--------------~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~~ 175 (312)
T 4ery_A 116 NPQSNLIVSGSFD--------------ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG----LCRI 175 (312)
T ss_dssp CSSSSEEEEEETT--------------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS----CEEE
T ss_pred cCCCCEEEEEeCC--------------CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC----cEEE
Confidence 2245566666543 4688999987653222 21111111122222 566777776554 4999
Q ss_pred EeCCCCce
Q 042957 266 YDGELNMW 273 (371)
Q Consensus 266 yd~~~~~W 273 (371)
||+.+.+-
T Consensus 176 wd~~~~~~ 183 (312)
T 4ery_A 176 WDTASGQC 183 (312)
T ss_dssp EETTTCCE
T ss_pred EECCCCce
Confidence 99987654
No 84
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.62 E-value=0.05 Score=48.35 Aligned_cols=112 Identities=12% Similarity=0.030 Sum_probs=55.3
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCC-CceEeCC----CCCCCceeeEEEE-ECC-EEEEEecccCCCCCCCCcccc
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPEL-DQWTPLP----NMSTLRYKCVGVT-WQG-KIHVVSGFAQRADSDGSVHFT 211 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~W~~~~----~~p~~~~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~ 211 (371)
+..||+.+..+ ..+.+||..+ .+...+. ..+....-..++. -++ .||+.+...
T Consensus 140 g~~l~~~~~~~--------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~------------ 199 (343)
T 1ri6_A 140 NRTLWVPALKQ--------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN------------ 199 (343)
T ss_dssp SSEEEEEEGGG--------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT------------
T ss_pred CCEEEEecCCC--------CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC------------
Confidence 34677665332 4688999887 6554322 1222211112222 244 477765322
Q ss_pred ccCeeEEEECC--CCceeeccc---cccCC---CCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCC--CCceEee
Q 042957 212 ERSSAEVYDTQ--AGKWDLVAR---MWQLD---IPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGE--LNMWDEV 276 (371)
Q Consensus 212 ~~~~v~~yd~~--t~~W~~~~~---~~~~~---~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~--~~~W~~~ 276 (371)
..+.+||+. +.+++.+.. ++... .....++.. ++.||+.+... +.+.+||+. +.+++.+
T Consensus 200 --~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~----~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 200 --SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA----SLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp --TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT----TEEEEEEECTTSCCEEEE
T ss_pred --CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC----CEEEEEEEcCCCCceEEe
Confidence 467888884 455543322 22210 011123333 34676665332 358899887 5567666
No 85
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.61 E-value=0.28 Score=43.05 Aligned_cols=32 Identities=13% Similarity=0.200 Sum_probs=21.3
Q ss_pred CCeEEEEcceeecccccceeeEEEEeecccccccccccCccc
Q 042957 312 GTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIV 353 (371)
Q Consensus 312 ~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p 353 (371)
++++++.||.+. .|.+||.++. ..|+.+..+.
T Consensus 317 ~~~~l~s~~~dg---------~v~iw~~~~~-~~~~~~~~~~ 348 (351)
T 3f3f_A 317 TGTILSSAGDDG---------KVRLWKATYS-NEFKCMSVIT 348 (351)
T ss_dssp SSCCEEEEETTS---------CEEEEEECTT-SCEEEEEEEC
T ss_pred CCCEEEEecCCC---------cEEEEecCcC-cchhheeehc
Confidence 567777777543 5778888764 3677776554
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.61 E-value=0.024 Score=57.42 Aligned_cols=138 Identities=10% Similarity=0.061 Sum_probs=73.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE--C--CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC--D--NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~ 183 (371)
..+.+||....++..+..+......-..+.+ + +..++.|+.+ ..+.+||..+++|..+..+.......
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D--------g~I~vwd~~~~~~~~~~~~~~h~~~V 102 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD--------GKVLIWKEENGRWSQIAVHAVHSASV 102 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT--------SCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC--------CeEEEEECCCCcccccccccCCCCCe
Confidence 4577777776677665444322222222222 3 6777777775 35889999888876665433222222
Q ss_pred EEE-EE-C--CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--------------
Q 042957 184 VGV-TW-Q--GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-------------- 245 (371)
Q Consensus 184 ~~~-~~-~--~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-------------- 245 (371)
..+ .. + +.+++.|+.+ ..+.+||+.+..-.....+.........++..
T Consensus 103 ~~v~~sp~~~~~~l~sgs~d--------------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~ 168 (753)
T 3jro_A 103 NSVQWAPHEYGPLLLVASSD--------------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTK 168 (753)
T ss_dssp EEEEECCGGGCSEEEEEETT--------------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CG
T ss_pred EEEEECCCCCCCEEEEEeCC--------------CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCC
Confidence 222 22 3 5677777643 47888998776322211111111111122222
Q ss_pred CCEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 246 DNRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 246 ~~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
++.+++.|+.++ .+.+||..+.
T Consensus 169 d~~~l~sgs~dg----~I~iwd~~~~ 190 (753)
T 3jro_A 169 ESRKFVTGGADN----LVKIWKYNSD 190 (753)
T ss_dssp GGCCEEEEETTS----CEEEEEEETT
T ss_pred CCCEEEEEECCC----eEEEEeccCC
Confidence 356677776554 3888887654
No 87
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.58 E-value=0.71 Score=46.81 Aligned_cols=137 Identities=5% Similarity=0.011 Sum_probs=78.9
Q ss_pred eEEEEECCCCeeeecCCCCCC-C--CCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC-CCCCc-eee
Q 042957 109 WVLRYNVKSNEWTRCAPLSVP-R--YDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN-MSTLR-YKC 183 (371)
Q Consensus 109 ~v~~yd~~~~~W~~~~~~~~~-r--~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~-~p~~~-~~~ 183 (371)
.+.+||+.+++.......... . ....+..-++.|++... ..+++||..++++..+.. ++... ...
T Consensus 108 Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~----------~gl~~~~~~~~~~~~~~~~~~~~~~i~~ 177 (795)
T 4a2l_A 108 GLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP----------EGLIMFDIKESKFIDDSFSTAMHKTIAS 177 (795)
T ss_dssp CEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET----------TEEEEEETTTTEEECSSSCHHHHTCCEE
T ss_pred chheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC----------CceEEEECCCCEEEeccCCCCCCcceEE
Confidence 378999999888776432111 1 11222234788887632 248899999888876543 11111 111
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEE-EECCEEEEEcCCCCCccCe
Q 042957 184 VGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIV-EVDNRLFSSGDCLKAWKGH 262 (371)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~ 262 (371)
.....++.|||.. ....+.+||+++++++.....+... ....+. .-++.|++.. .. ..
T Consensus 178 i~~d~~g~lwigt---------------~~~Gl~~~~~~~~~~~~~~~~~~~~-~i~~i~~d~~g~lwigt-~~----~G 236 (795)
T 4a2l_A 178 TLYRQGDQIYIGT---------------STDGLYTYSITQKTFEKVIPILGTK-QIQAILQQSPTRIWVAT-EG----AG 236 (795)
T ss_dssp EEEEETTEEEEEE---------------SSSCEEEEETTTCCEEECC----CC-CEEEEEEEETTEEEEEE-BS----SC
T ss_pred EEECCCCCEEEEE---------------CCCCEEEEeCCCCeEEEecCCCCCC-eeEEEEEcCCCCEEEEE-CC----CC
Confidence 1223478898843 1135789999999887764322111 111222 2367777742 11 13
Q ss_pred EEEEeCCCCceEee
Q 042957 263 IESYDGELNMWDEV 276 (371)
Q Consensus 263 ~~~yd~~~~~W~~~ 276 (371)
+++||+.+++++..
T Consensus 237 l~~~~~~~~~~~~~ 250 (795)
T 4a2l_A 237 LFLINPKTKEIKNY 250 (795)
T ss_dssp EEEEETTTTEEEEE
T ss_pred eEEEeCCCCeEEEe
Confidence 99999999988877
No 88
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.57 E-value=0.23 Score=45.52 Aligned_cols=109 Identities=9% Similarity=0.003 Sum_probs=56.6
Q ss_pred EEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC-CCCCceeeEEEE-ECCEEEEEecccCCCCCCCCccccccCeeEE
Q 042957 141 KIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN-MSTLRYKCVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEV 218 (371)
Q Consensus 141 ~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~-~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~ 218 (371)
.+++.|+.+ ..+.+||..+.+....-. ......-..++. -++++++.|+.+ ..+.+
T Consensus 145 ~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------~~i~i 202 (402)
T 2aq5_A 145 NVLLSAGCD--------NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD--------------KRVRV 202 (402)
T ss_dssp TEEEEEETT--------SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT--------------SEEEE
T ss_pred CEEEEEcCC--------CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC--------------CcEEE
Confidence 577777765 358899998875543211 011111112222 256666666533 47899
Q ss_pred EECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 219 YDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 219 yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
||+++.+-...............++. -++++++.|.. ......+.+||+.+..
T Consensus 203 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 203 IEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS-RMSERQVALWDTKHLE 256 (402)
T ss_dssp EETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC-TTCCEEEEEEETTBCS
T ss_pred EeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc-CCCCceEEEEcCcccc
Confidence 99988764332211111111123333 36677777621 1122359999998743
No 89
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.54 E-value=0.26 Score=45.57 Aligned_cols=136 Identities=5% Similarity=0.006 Sum_probs=66.4
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+..||..+.+.... +. .|...-.+++.. ++.+++.|+.+ ..+..+|..
T Consensus 130 g~i~vwd~~~~~~~~~--l~----~h~~~V~~v~~~~~~~~l~sgs~D-----------------------~~i~iwd~~ 180 (410)
T 1vyh_C 130 ATIKVWDYETGDFERT--LK----GHTDSVQDISFDHSGKLLASCSAD-----------------------MTIKLWDFQ 180 (410)
T ss_dssp SCEEEEETTTCCCCEE--EC----CCSSCEEEEEECTTSSEEEEEETT-----------------------SCCCEEETT
T ss_pred CeEEEEECCCCcEEEE--Ee----ccCCcEEEEEEcCCCCEEEEEeCC-----------------------CeEEEEeCC
Confidence 3478889877653321 11 121222234433 46677777764 345666765
Q ss_pred CCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHV 194 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv 194 (371)
+.+- +..+......-..+.+ ++..++.|+.+ ..+.+||..+......-.-...........-++++++
T Consensus 181 ~~~~--~~~~~~h~~~V~~v~~~p~~~~l~s~s~D--------~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~ 250 (410)
T 1vyh_C 181 GFEC--IRTMHGHDHNVSSVSIMPNGDHIVSASRD--------KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA 250 (410)
T ss_dssp SSCE--EECCCCCSSCEEEEEECSSSSEEEEEETT--------SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred CCce--eEEEcCCCCCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEE
Confidence 5432 2222211111122222 56667777765 4688999887754321100001111111122556666
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCce
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKW 226 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W 226 (371)
.|+.+ ..+.+||..+...
T Consensus 251 s~s~D--------------~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 251 SCSND--------------QTVRVWVVATKEC 268 (410)
T ss_dssp EEETT--------------SCEEEEETTTCCE
T ss_pred EEcCC--------------CeEEEEECCCCce
Confidence 66543 4677888877654
No 90
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.54 E-value=0.043 Score=49.64 Aligned_cols=143 Identities=10% Similarity=0.109 Sum_probs=74.1
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCC-e-eEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCcee-e
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYD-F-ACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYK-C 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~-~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~-~ 183 (371)
..+..+|..+++|.....+...... - +++. -+++.++.|+.+. .+.+||..+..++.+..+..-... .
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--------~v~iw~~~~~~~~~~~~~~~h~~~v~ 109 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--------TTCIWKKNQDDFECVTTLEGHENEVK 109 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEECCC-EEEEEEECCCSSCEE
T ss_pred CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC--------cEEEEEccCCCeEEEEEccCCCCCce
Confidence 4566777777776533222212111 1 1221 2567777777753 467788777766544333221111 1
Q ss_pred EEEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc-eeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCcc
Q 042957 184 VGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK-WDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWK 260 (371)
Q Consensus 184 ~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~ 260 (371)
.++. -++++++.|+.+ ..+.+||+.+.. +..+..+..-......++.. ++++++.|+.+.
T Consensus 110 ~v~~sp~~~~l~s~s~D--------------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~--- 172 (345)
T 3fm0_A 110 SVAWAPSGNLLATCSRD--------------KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD--- 172 (345)
T ss_dssp EEEECTTSSEEEEEETT--------------SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS---
T ss_pred EEEEeCCCCEEEEEECC--------------CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC---
Confidence 2222 256667677543 467888887653 33332222111111122222 566777776554
Q ss_pred CeEEEEeCCCCceEee
Q 042957 261 GHIESYDGELNMWDEV 276 (371)
Q Consensus 261 ~~~~~yd~~~~~W~~~ 276 (371)
.+.+||..+..|..+
T Consensus 173 -~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 173 -TVKLYREEEDDWVCC 187 (345)
T ss_dssp -CEEEEEEETTEEEEE
T ss_pred -cEEEEEecCCCEEEE
Confidence 499999998888765
No 91
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.52 E-value=0.43 Score=43.12 Aligned_cols=137 Identities=12% Similarity=0.044 Sum_probs=68.6
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-E--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-C--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCV 184 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~ 184 (371)
..+..+|+.+.+-...-.-..... .++.. . ++.+++.|+.+ ..+.+||..+.+....-....... .+
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~g~~l~sgs~D--------g~v~~wd~~~~~~~~~~~~h~~~v-~~ 245 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGADV-LCLDLAPSETGNTFVSGGCD--------KKAMVWDMRSGQCVQAFETHESDV-NS 245 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCE-EEEEECCCSSCCEEEEEETT--------SCEEEEETTTCCEEEEECCCSSCE-EE
T ss_pred CcEEEEeCCCCeEEEEEcCCCCCe-EEEEEEeCCCCCEEEEEeCC--------CeEEEEECCCCcEEEEecCCCCCe-EE
Confidence 567788887765432111000000 11111 1 35677788775 358899998876543211111111 12
Q ss_pred EEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCCccCe
Q 042957 185 GVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGH 262 (371)
Q Consensus 185 ~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~ 262 (371)
++. -++.+++.|+.+ ..+.+||+.+.+-..+............++. .++++++.|+... .
T Consensus 246 v~~~p~~~~l~s~s~D--------------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~----~ 307 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDD--------------ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY----T 307 (354)
T ss_dssp EEECTTSSEEEEEETT--------------SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS----C
T ss_pred EEEeCCCCEEEEEeCC--------------CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC----c
Confidence 222 256666677643 4688899987643222111111111112222 2567777776554 4
Q ss_pred EEEEeCCCCc
Q 042957 263 IESYDGELNM 272 (371)
Q Consensus 263 ~~~yd~~~~~ 272 (371)
+.+||..+..
T Consensus 308 i~vwd~~~~~ 317 (354)
T 2pbi_B 308 INVWDVLKGS 317 (354)
T ss_dssp EEEEETTTCS
T ss_pred EEEEECCCCc
Confidence 9999987643
No 92
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.52 E-value=0.39 Score=48.78 Aligned_cols=222 Identities=11% Similarity=0.097 Sum_probs=118.5
Q ss_pred eeEEeCCCCceeccCCCCcccc--cccccceEEEEE-CCE-EEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 40 LASYNPSNNTWSHVSHIPDLLE--NHVLKGFSIVSL-GDS-VYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 40 ~~~yd~~~~~W~~~~~~~~~~~--~~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+||+.++++..+...+..+. -....-.+++.. ++. |||- .. ...+++||+
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig-t~-----------------------~~Gl~~~d~ 434 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG-TH-----------------------AGGLSILHR 434 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE-ET-----------------------TTEEEEEET
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE-eC-----------------------cCceeEEeC
Confidence 7889999988877653221000 001122344444 466 7764 22 235889999
Q ss_pred CCCeeeecCCCCC--CCCC-eeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCC------CCCceeeEE
Q 042957 116 KSNEWTRCAPLSV--PRYD-FACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNM------STLRYKCVG 185 (371)
Q Consensus 116 ~~~~W~~~~~~~~--~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~------p~~~~~~~~ 185 (371)
.+++++....... +... .+++.. ++.|++... .-+.+||+.+++|+..... +........
T Consensus 435 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 504 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL----------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLF 504 (795)
T ss_dssp TTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES----------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEE
T ss_pred CCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec----------CceeEEeCCCCeEEEccccccccccCCceEEEEE
Confidence 9888877653211 1111 122222 467776532 2388999999999877532 111111111
Q ss_pred EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecccc---cc-CCCCCCeEEE-ECCEEEEEcCCCCCcc
Q 042957 186 VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARM---WQ-LDIPPNQIVE-VDNRLFSSGDCLKAWK 260 (371)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~---~~-~~~~~~~~~~-~~~~iyv~GG~~~~~~ 260 (371)
.-.++.|++... ..+.+||+.++++ ..... .. +.....+++. .++.|++-.. .
T Consensus 505 ~d~~g~lWigt~----------------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~---- 562 (795)
T 4a2l_A 505 RDSHKRLWIGGE----------------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E---- 562 (795)
T ss_dssp ECTTCCEEEEES----------------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S----
T ss_pred ECCCCCEEEEeC----------------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C----
Confidence 123567887552 3478899988887 43211 10 1111112322 2567777532 1
Q ss_pred CeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeee-CCeEEEEcceeecccccceeeEEEEeec
Q 042957 261 GHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPI-GTHLYFLAGYRMAGELARTMSMVHIFDT 339 (371)
Q Consensus 261 ~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~v~~~d~ 339 (371)
.+.+||+.+++++..... ..++.. . -.+++.- ++.|++.+. .-+..||+
T Consensus 563 -Gl~~~d~~~~~~~~~~~~--~gl~~~---------------~-i~~i~~d~~g~lWi~t~-----------~Gl~~~~~ 612 (795)
T 4a2l_A 563 -GFYCFNEKDKQIKRYNTT--NGLPNN---------------V-VYGILEDSFGRLWLSTN-----------RGISCFNP 612 (795)
T ss_dssp -CEEEEETTTTEEEEECGG--GTCSCS---------------C-EEEEEECTTSCEEEEET-----------TEEEEEET
T ss_pred -CceeECCCCCcEEEeCCC--CCCchh---------------h-eEEEEECCCCCEEEEcC-----------CceEEEcC
Confidence 399999999998887311 234322 1 2334433 568887542 23457787
Q ss_pred cccccccccc
Q 042957 340 AAKSDAWRSF 349 (371)
Q Consensus 340 ~~~~~~W~~~ 349 (371)
++. +++..
T Consensus 613 ~~~--~~~~~ 620 (795)
T 4a2l_A 613 ETE--KFRNF 620 (795)
T ss_dssp TTT--EEEEE
T ss_pred CCC--cEEEc
Confidence 766 55544
No 93
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.45 E-value=0.18 Score=45.79 Aligned_cols=58 Identities=9% Similarity=0.011 Sum_probs=30.1
Q ss_pred CeeEEEECCCCceeecccccc-C---CCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 214 SSAEVYDTQAGKWDLVARMWQ-L---DIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 214 ~~v~~yd~~t~~W~~~~~~~~-~---~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
..+.+||+.+.+-...-.... . ......++.. ++++++.|+... ....+.+||+.+.+
T Consensus 207 g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~-~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 207 GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN-SFGCITLYETEFGE 269 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET-TEEEEEEEETTTCC
T ss_pred CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC-CCceEEEEECCCCc
Confidence 478899998775433222100 0 1111123332 566677766440 01259999998754
No 94
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.43 E-value=0.018 Score=52.36 Aligned_cols=139 Identities=14% Similarity=0.081 Sum_probs=68.4
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCc-eEeCCCCCCCcee-e
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQ-WTPLPNMSTLRYK-C 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~~~~-~ 183 (371)
..+..||..++.|+.+..+.........+.+ ++++++.|+.+ ..+.+||..+.. |.....+...... .
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d--------~~v~vwd~~~~~~~~~~~~~~~~~~~v~ 104 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD--------RNAYVYEKRPDGTWKQTLVLLRLNRAAT 104 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT--------SSEEEC------CCCCEEECCCCSSCEE
T ss_pred CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC--------CeEEEEEcCCCCceeeeeEecccCCceE
Confidence 4567778888888777666533322222222 56777777765 358888888776 4433222211111 1
Q ss_pred EEEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc-eeeccccccCCCC-CCeEEEE-CCEEEEEcCCCCCc
Q 042957 184 VGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK-WDLVARMWQLDIP-PNQIVEV-DNRLFSSGDCLKAW 259 (371)
Q Consensus 184 ~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~~~~-~~~~~~~-~~~iyv~GG~~~~~ 259 (371)
.++. -++++++.|+.+ ..+.+||..+.+ |.....+..+... ...++.. ++++++.|+.+.
T Consensus 105 ~~~~~~~~~~l~~~~~d--------------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-- 168 (377)
T 3dwl_C 105 FVRWSPNEDKFAVGSGA--------------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR-- 168 (377)
T ss_dssp EEECCTTSSCCEEEESS--------------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS--
T ss_pred EEEECCCCCEEEEEecC--------------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC--
Confidence 2222 255666666543 467888888764 4444433321111 1123332 566777776654
Q ss_pred cCeEEEEeCCCCc
Q 042957 260 KGHIESYDGELNM 272 (371)
Q Consensus 260 ~~~~~~yd~~~~~ 272 (371)
.+.+||+.+..
T Consensus 169 --~i~iwd~~~~~ 179 (377)
T 3dwl_C 169 --KAYVLSAYVRD 179 (377)
T ss_dssp --CEEEEEECCSS
T ss_pred --EEEEEEEEecc
Confidence 48999986544
No 95
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.42 E-value=0.069 Score=48.60 Aligned_cols=107 Identities=17% Similarity=0.118 Sum_probs=56.7
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-C-CEEEEEecccCCCCCCCCccccccCee
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-Q-GKIHVVSGFAQRADSDGSVHFTERSSA 216 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~~~~v 216 (371)
+++.++.|+.+ ..+.+||..+.+-...-....... ..++.. + +.+++.++.+ ..+
T Consensus 150 dg~~l~sgs~d--------g~v~iwd~~~~~~~~~~~~h~~~v-~~v~~s~~~~~~~~s~~~d--------------g~v 206 (357)
T 4g56_B 150 DGTQAVSGGKD--------FSVKVWDLSQKAVLKSYNAHSSEV-NCVAACPGKDTIFLSCGED--------------GRI 206 (357)
T ss_dssp SSSEEEEEETT--------SCEEEEETTTTEEEEEECCCSSCE-EEEEECTTCSSCEEEEETT--------------SCE
T ss_pred CCCEEEEEeCC--------CeEEEEECCCCcEEEEEcCCCCCE-EEEEEccCCCceeeeeccC--------------Cce
Confidence 66777777765 358889988775432211111111 122222 3 3466666543 467
Q ss_pred EEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 217 EVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 217 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
.+||+++.+-..............+++.. ++++++.|+... .+.+||+.+.+
T Consensus 207 ~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~----~i~~wd~~~~~ 260 (357)
T 4g56_B 207 LLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG----NVSLVNIKNPD 260 (357)
T ss_dssp EECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS----CEEEEESSCGG
T ss_pred EEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc----ceeEEECCCCc
Confidence 88998876543332222111111123332 456777776554 49999987643
No 96
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.42 E-value=0.4 Score=47.22 Aligned_cols=154 Identities=6% Similarity=-0.146 Sum_probs=81.6
Q ss_pred cceEEEEECCC------CeeeecC-CCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCC-CC---ceEeCCC
Q 042957 107 LAWVLRYNVKS------NEWTRCA-PLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPE-LD---QWTPLPN 175 (371)
Q Consensus 107 ~~~v~~yd~~~------~~W~~~~-~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~-t~---~W~~~~~ 175 (371)
..+++++|..+ .+.+.+. .-. .........-+++.+++...+..........++++|.. +. ..+.+..
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 46899999988 6665554 221 11111222235554444433221111123579999998 56 3333322
Q ss_pred CCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCC----CC--CCeEEEE-CCE
Q 042957 176 MSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLD----IP--PNQIVEV-DNR 248 (371)
Q Consensus 176 ~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~----~~--~~~~~~~-~~~ 248 (371)
-...........-+++||+.+...+ ...++.+|+.+.+++.+....... .. ...++.. +++
T Consensus 239 ~~~~~~~~~~~spdg~l~~~~~~~~------------~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGSLIVATDRTG------------WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp ETTBCEEEEEECTTSCEEEEECTTS------------SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC
T ss_pred CCCceEcceEECCCCeEEEEECCCC------------CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE
Confidence 1111111111223677776664432 137899999888888775432111 00 1234444 677
Q ss_pred EEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 249 LFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 249 iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
+++.+.. ....++.+|+.+...+.+
T Consensus 307 ~~~~~~~---~~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 307 IAVVHGK---GAAVLGILDPESGELVDA 331 (662)
T ss_dssp EEEEEBS---SSCEEEEEETTTTEEEEC
T ss_pred EEEEEEc---CccEEEEEECCCCcEEEe
Confidence 7777654 334688889988877776
No 97
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.41 E-value=0.11 Score=47.53 Aligned_cols=134 Identities=8% Similarity=-0.013 Sum_probs=65.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe-CCCCCCCceeeEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP-LPNMSTLRYKCVGV 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~~~~~~~~ 186 (371)
..+..||..+.+-...-.............-+++.++.|+.+ ..+.+||..+.+... +..... .-..++
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~--~i~~~~ 296 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDD--------GTLRIWHGGNGNSQNCFYGHSQ--SIVSAS 296 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETT--------SCEEEECSSSBSCSEEECCCSS--CEEEEE
T ss_pred CeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCC--------CEEEEEECCCCccceEecCCCc--cEEEEE
Confidence 468889987654221111111111111222256666776654 358888887653221 111111 112223
Q ss_pred EE-CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEE
Q 042957 187 TW-QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 187 ~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 264 (371)
.. ++ +++.++.. ..+.+||+.+.+-...... .......++.. ++++++.|+..+ .+.
T Consensus 297 ~~~~~-~l~~~~~d--------------~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg----~i~ 355 (425)
T 1r5m_A 297 WVGDD-KVISCSMD--------------GSVRLWSLKQNTLLALSIV--DGVPIFAGRISQDGQKYAVAFMDG----QVN 355 (425)
T ss_dssp EETTT-EEEEEETT--------------SEEEEEETTTTEEEEEEEC--TTCCEEEEEECTTSSEEEEEETTS----CEE
T ss_pred ECCCC-EEEEEeCC--------------CcEEEEECCCCcEeEeccc--CCccEEEEEEcCCCCEEEEEECCC----eEE
Confidence 33 45 55555433 4788999987653322211 11111123322 466777766544 489
Q ss_pred EEeCCCCc
Q 042957 265 SYDGELNM 272 (371)
Q Consensus 265 ~yd~~~~~ 272 (371)
+||+.+..
T Consensus 356 i~~~~~~~ 363 (425)
T 1r5m_A 356 VYDLKKLN 363 (425)
T ss_dssp EEECHHHH
T ss_pred EEECCCCc
Confidence 99987654
No 98
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.41 E-value=0.3 Score=42.99 Aligned_cols=135 Identities=10% Similarity=0.024 Sum_probs=63.4
Q ss_pred ceEEEEECCCCeeee-cCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCC-CceeeE
Q 042957 108 AWVLRYNVKSNEWTR-CAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMST-LRYKCV 184 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~-~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~~~~~~ 184 (371)
..+..+|..+.+-.. +... ...-.+++. -++.+++.|+.+ ..+.+||..++. .....+.. ...-..
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~sgs~D--------~~v~lWd~~~~~-~~~~~~~~h~~~v~~ 145 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAH--PDYIRSIAVHPTKPYVLSGSDD--------LTVKLWNWENNW-ALEQTFEGHEHFVMC 145 (304)
T ss_dssp SEEEEEETTTCCEEEEEECC--SSCEEEEEECSSSSEEEEEETT--------SCEEEEEGGGTT-EEEEEECCCCSCEEE
T ss_pred CEEEEEECCCCcEEEEEeCC--CCcEEEEEEcCCCCEEEEECCC--------CeEEEEECCCCc-chhhhhcccCCcEEE
Confidence 567788887664321 1111 111112222 256677777765 357888876542 11111111 111112
Q ss_pred EEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE---CCEEEEEcCCCCCc
Q 042957 185 GVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV---DNRLFSSGDCLKAW 259 (371)
Q Consensus 185 ~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~ 259 (371)
++.. ++.+++.|+.+ ..+.+||+.+..-......... .....+... ++.+++.|+.+.
T Consensus 146 v~~~p~~~~~l~sgs~D--------------~~v~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~s~D~-- 208 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCLD--------------RTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDDL-- 208 (304)
T ss_dssp EEECTTCTTEEEEEETT--------------SEEEEEETTCSSCSEEEECCCT-TCEEEEEECCSTTCCEEEEEETTS--
T ss_pred EEECCCCCCEEEEEeCC--------------CeEEEEECCCCCccceeccCCc-CcEEEEEEEEcCCCCEEEEEcCCC--
Confidence 2222 44567777644 4788899865432111100000 111112221 456677766554
Q ss_pred cCeEEEEeCCCCc
Q 042957 260 KGHIESYDGELNM 272 (371)
Q Consensus 260 ~~~~~~yd~~~~~ 272 (371)
.+.+||+.+.+
T Consensus 209 --~i~iWd~~~~~ 219 (304)
T 2ynn_A 209 --TIKIWDYQTKS 219 (304)
T ss_dssp --EEEEEETTTTE
T ss_pred --eEEEEeCCCCc
Confidence 59999998754
No 99
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.41 E-value=0.17 Score=44.38 Aligned_cols=186 Identities=9% Similarity=0.019 Sum_probs=93.1
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-C-CEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-G-DSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..+.+||+.++++..+.. +... .+...-++++.. + +++|+.... ..+++||+
T Consensus 46 ~~i~~~d~~~g~~~~~~~-~~~~-~~~~~~~~i~~~~~~g~l~v~~~~------------------------~~l~~~d~ 99 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICK-PEVN-GYGGIPAGCQCDRDANQLFVADMR------------------------LGLLVVQT 99 (314)
T ss_dssp CEEEEECTTTCCEEEEEC-CEET-TEECCEEEEEECSSSSEEEEEETT------------------------TEEEEEET
T ss_pred CEEEEEeCCCCcEEEEEe-cccC-CCCCCCceEEEecCCCcEEEEECC------------------------CCEEEEeC
Confidence 458999999888876543 1000 011122345443 4 688887532 25889999
Q ss_pred CCCeeeec-CCCCC--CCC-CeeEEE-ECCEEEEEcCCCCC-------CCCCCCceEEEEeCCCCceEeCCC-CCCCcee
Q 042957 116 KSNEWTRC-APLSV--PRY-DFACTV-CDNKIYVAGGKSNL-------FSAKGTASAEVYHPELDQWTPLPN-MSTLRYK 182 (371)
Q Consensus 116 ~~~~W~~~-~~~~~--~r~-~~~~~~-~~~~lyv~GG~~~~-------~~~~~~~~~~~yd~~t~~W~~~~~-~p~~~~~ 182 (371)
. ++...+ ..... +.. -..++. -++++|+....... ........++++|+. .+...+.. +.. .
T Consensus 100 ~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~ 174 (314)
T 1pjx_A 100 D-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF---P 174 (314)
T ss_dssp T-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS---E
T ss_pred C-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC---c
Confidence 8 776655 32221 111 123333 36788887543200 011123578889876 55544321 111 1
Q ss_pred eEEEEE-----CC-EEEEEecccCCCCCCCCccccccCeeEEEECC-CCceeec---cccccCC-CCCCeEEEE-CCEEE
Q 042957 183 CVGVTW-----QG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQ-AGKWDLV---ARMWQLD-IPPNQIVEV-DNRLF 250 (371)
Q Consensus 183 ~~~~~~-----~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~-t~~W~~~---~~~~~~~-~~~~~~~~~-~~~iy 250 (371)
..++.. ++ .||+.... ...+.+||++ +++.... ..++... .....++.. +++||
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~--------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~ 240 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETP--------------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL 240 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETT--------------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE
T ss_pred ceEEEecccCCCCCEEEEEECC--------------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEE
Confidence 222333 34 47776532 1468888876 4443221 1122110 111234333 57788
Q ss_pred EEcCCCCCccCeEEEEeCCCCc
Q 042957 251 SSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 251 v~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+..... +.+.+||+++.+
T Consensus 241 v~~~~~----~~i~~~d~~~g~ 258 (314)
T 1pjx_A 241 VANWGS----SHIEVFGPDGGQ 258 (314)
T ss_dssp EEEETT----TEEEEECTTCBS
T ss_pred EEEcCC----CEEEEEcCCCCc
Confidence 874222 259999998543
No 100
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.39 E-value=0.05 Score=48.51 Aligned_cols=108 Identities=9% Similarity=0.192 Sum_probs=53.7
Q ss_pred CeeEEEECCC-CceeeccccccCCCCCCeEEEE-C----CEEEEEcCCCCCccCeEEEEeCCC---CceEeecCcccccC
Q 042957 214 SSAEVYDTQA-GKWDLVARMWQLDIPPNQIVEV-D----NRLFSSGDCLKAWKGHIESYDGEL---NMWDEVNGSCLQTL 284 (371)
Q Consensus 214 ~~v~~yd~~t-~~W~~~~~~~~~~~~~~~~~~~-~----~~iyv~GG~~~~~~~~~~~yd~~~---~~W~~~~~~~~~~l 284 (371)
..+.+||..+ ..|..+..+..-......++.. + +++++.|+.+. .+.+||+.+ ..|... .+...
T Consensus 189 ~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~----~v~iw~~~~~~~~~~~~~---~~~~~ 261 (316)
T 3bg1_A 189 NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG----RVFIWTCDDASSNTWSPK---LLHKF 261 (316)
T ss_dssp SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC----EEEEEECSSTTCCCCBCC---EEEEC
T ss_pred CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC----eEEEEEccCccccchhhh---hhhcC
Confidence 3567777764 4566554443211111122222 2 25677776554 488888875 333221 00111
Q ss_pred CCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccccccccccCcccc
Q 042957 285 SSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIVE 354 (371)
Q Consensus 285 ~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p~ 354 (371)
.. ........-++++++.||.+. .|.+|+...+ ..|..+..+.+
T Consensus 262 ~~----------------~v~~v~~sp~g~~las~~~D~---------~v~lw~~~~~-g~~~~~~~~~~ 305 (316)
T 3bg1_A 262 ND----------------VVWHVSWSITANILAVSGGDN---------KVTLWKESVD-GQWVCISDVNK 305 (316)
T ss_dssp SS----------------CEEEEEECTTTCCEEEEESSS---------CEEEEEECTT-SCEEEEEECC-
T ss_pred CC----------------cEEEEEEcCCCCEEEEEcCCC---------eEEEEEECCC-CcEEEeeeccC
Confidence 11 111222223567777777643 5667776533 27998887774
No 101
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.34 E-value=0.035 Score=50.47 Aligned_cols=138 Identities=12% Similarity=0.055 Sum_probs=66.3
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+..||..++.|..+..+.. |...-.+++.. ++..++.|+.+ ..+..+|..
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~----h~~~v~~~~~s~~~~~l~s~s~d-----------------------~~v~vwd~~ 85 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSD----HDKIVTCVDWAPKSNRIVTCSQD-----------------------RNAYVYEKR 85 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCC----CSSCEEEEEECTTTCCEEEEETT-----------------------SSEEEC---
T ss_pred CEEEEEEccCCceEEEEEEec----CCceEEEEEEeCCCCEEEEEeCC-----------------------CeEEEEEcC
Confidence 357889988887777766542 22223344444 45666666653 457778877
Q ss_pred CCe-eeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCc-eEeCCCCCCCc--eeeEEEE-EC
Q 042957 117 SNE-WTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQ-WTPLPNMSTLR--YKCVGVT-WQ 189 (371)
Q Consensus 117 ~~~-W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~~--~~~~~~~-~~ 189 (371)
+.+ |.....+.........+. -++++++.|+.+ ..+.+||..+.+ |.....+..+. .-..++. -+
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA--------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS--------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecC--------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 766 544332221111111222 256677777764 357888887664 33333222211 1112222 25
Q ss_pred CEEEEEecccCCCCCCCCccccccCeeEEEECCCC
Q 042957 190 GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG 224 (371)
Q Consensus 190 ~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~ 224 (371)
+++++.|+.+ ..+.+||+.+.
T Consensus 158 ~~~l~~~~~d--------------~~i~iwd~~~~ 178 (377)
T 3dwl_C 158 NVLLAAGCAD--------------RKAYVLSAYVR 178 (377)
T ss_dssp SSEEEEEESS--------------SCEEEEEECCS
T ss_pred CCEEEEEeCC--------------CEEEEEEEEec
Confidence 5666677543 35778887543
No 102
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.33 E-value=0.068 Score=48.50 Aligned_cols=137 Identities=12% Similarity=0.053 Sum_probs=67.2
Q ss_pred ceEEEEECCCCeeeecCCC-CCCCCC--eeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCcee-
Q 042957 108 AWVLRYNVKSNEWTRCAPL-SVPRYD--FACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYK- 182 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~-~~~r~~--~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~- 182 (371)
..+..+|..+++-...... ...+.. .+++. -+++.++.|+.+ ..+.+||..+++-... +..-...
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d--------~~i~iwd~~~~~~~~~--~~~h~~~V 172 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD--------ICIKVWDLAQQVVLSS--YRAHAAQV 172 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTEEEEE--ECCCSSCE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC--------CeEEEEECCCCcEEEE--EcCcCCce
Confidence 4577788776653221111 011111 11222 267777788775 3588899987653221 1111111
Q ss_pred eEEEE-EC-CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCC
Q 042957 183 CVGVT-WQ-GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKA 258 (371)
Q Consensus 183 ~~~~~-~~-~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~ 258 (371)
..++. .+ ..+++.|+.+ ..+.+||+++.+-...-..........+++.. ++++++.|+.+.
T Consensus 173 ~~~~~~~~~~~~l~s~s~D--------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg- 237 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSED--------------NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG- 237 (344)
T ss_dssp EEEEECSSCTTEEEEEETT--------------SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS-
T ss_pred EEEEecCCCCCceeeeccc--------------cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC-
Confidence 11222 23 3467766543 46888999877543322111111111123222 556788876554
Q ss_pred ccCeEEEEeCCCCc
Q 042957 259 WKGHIESYDGELNM 272 (371)
Q Consensus 259 ~~~~~~~yd~~~~~ 272 (371)
.+.+||+.+.+
T Consensus 238 ---~v~~wd~~~~~ 248 (344)
T 4gqb_B 238 ---TVSLVDTKSTS 248 (344)
T ss_dssp ---EEEEEESCC--
T ss_pred ---cEEEEECCCCc
Confidence 49999987643
No 103
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.23 E-value=0.25 Score=43.32 Aligned_cols=63 Identities=10% Similarity=0.143 Sum_probs=35.6
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee-EEEEE-C--CEEEEEecccCCCCCCCCccccccCe
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC-VGVTW-Q--GKIHVVSGFAQRADSDGSVHFTERSS 215 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~-~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~~~~ 215 (371)
+.+++.|+.+ ..+.+||..+.+|..+..+....... .++.. + +.+++.|+.+ ..
T Consensus 67 g~~l~s~s~D--------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d--------------~~ 124 (297)
T 2pm7_B 67 GTILASCSYD--------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD--------------GK 124 (297)
T ss_dssp CSEEEEEETT--------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--------------SE
T ss_pred CCEEEEEcCC--------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC--------------Cc
Confidence 5677777765 36888999887776543322111111 12222 2 4566666533 46
Q ss_pred eEEEECCCC
Q 042957 216 AEVYDTQAG 224 (371)
Q Consensus 216 v~~yd~~t~ 224 (371)
+.+||+.+.
T Consensus 125 v~~wd~~~~ 133 (297)
T 2pm7_B 125 VSVVEFKEN 133 (297)
T ss_dssp EEEEEBCSS
T ss_pred EEEEEecCC
Confidence 778887765
No 104
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.23 E-value=0.24 Score=45.27 Aligned_cols=109 Identities=9% Similarity=0.012 Sum_probs=57.6
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCC-----CceeeEEEEE-CC-EEEEEecccCCCCCCCCccccc
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMST-----LRYKCVGVTW-QG-KIHVVSGFAQRADSDGSVHFTE 212 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-----~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~ 212 (371)
+.+++.|+.+ ..+.+||..+.+....-..+. ...-..++.. ++ .+++.++..+..
T Consensus 178 ~~~l~~~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~---------- 239 (416)
T 2pm9_A 178 AHVFASAGSS--------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND---------- 239 (416)
T ss_dssp TTEEEEESSS--------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS----------
T ss_pred CcEEEEEcCC--------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC----------
Confidence 5777787765 358999998875543322221 1111222222 33 466666544311
Q ss_pred cCeeEEEECCCCceeeccccc-cCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 213 RSSAEVYDTQAGKWDLVARMW-QLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 213 ~~~v~~yd~~t~~W~~~~~~~-~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
..+.+||+.+..- .+..+. ........++.. ++++++.|+.+. .+.+||+.+.+
T Consensus 240 -~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg----~v~~wd~~~~~ 296 (416)
T 2pm9_A 240 -PSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN----TVLLWNPESAE 296 (416)
T ss_dssp -CCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS----EEEEECSSSCC
T ss_pred -ceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCC----CEEEeeCCCCc
Confidence 2678899887531 111111 111111123332 567777777554 49999988754
No 105
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.20 E-value=0.26 Score=43.99 Aligned_cols=106 Identities=8% Similarity=0.054 Sum_probs=54.1
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCC--CceEeCCCCCCCceeeEEEE--ECCEEEEEecccCCCCCCCCccccccC
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPEL--DQWTPLPNMSTLRYKCVGVT--WQGKIHVVSGFAQRADSDGSVHFTERS 214 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~ 214 (371)
+++.++.|+.+ ..+.+||... ..++.+..+..-......+. -++.+++.|+.+ .
T Consensus 118 ~g~~las~s~D--------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D--------------~ 175 (330)
T 2hes_X 118 DGYYLATCSRD--------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD--------------D 175 (330)
T ss_dssp TSCEEEEEETT--------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT--------------S
T ss_pred CCCEEEEEeCC--------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC--------------C
Confidence 56777777765 3578888743 23443322221111111122 255666667544 4
Q ss_pred eeEEEECCCCceeeccccccCCCCCCeEEEEC---CEEEEEcCCCCCccCeEEEEeCCC
Q 042957 215 SAEVYDTQAGKWDLVARMWQLDIPPNQIVEVD---NRLFSSGDCLKAWKGHIESYDGEL 270 (371)
Q Consensus 215 ~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~yd~~~ 270 (371)
.+.+||..+..|+.+..+..-......+.... +..++.|+.+. .+.+||+.+
T Consensus 176 ~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~----~v~iw~~~~ 230 (330)
T 2hes_X 176 TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS----TVRVWKYMG 230 (330)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS----CEEEEEEEE
T ss_pred eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC----eEEEEEecC
Confidence 67888888877766554432111111222222 34556666544 377777643
No 106
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.18 E-value=0.21 Score=44.63 Aligned_cols=112 Identities=10% Similarity=0.052 Sum_probs=58.7
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCcee-eEEEEE-C--CEEEEEecccCCCCCCCCccccccC
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYK-CVGVTW-Q--GKIHVVSGFAQRADSDGSVHFTERS 214 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~-~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~~~ 214 (371)
++.+++.|+.+ ..+.+||..+..|+.+..+..-... ..+... + +.+++.|+.+ .
T Consensus 164 ~~~~l~s~s~D--------~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D--------------~ 221 (330)
T 2hes_X 164 SEALLASSSYD--------DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD--------------S 221 (330)
T ss_dssp SSSEEEEEETT--------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT--------------S
T ss_pred CCCEEEEEcCC--------CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC--------------C
Confidence 56777777775 3577788777767655433221111 112222 2 3344455433 3
Q ss_pred eeEEEECCCC------ceeeccccccCCC-CCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 215 SAEVYDTQAG------KWDLVARMWQLDI-PPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 215 ~v~~yd~~t~------~W~~~~~~~~~~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
.+.+||+.+. .|.....++.... ....++...+.+++.||.++ .+.+||..+..|+.+
T Consensus 222 ~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg----~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 222 TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADG----VLAVYEEVDGEWKVF 286 (330)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTS----CEEEEEEETTEEEEE
T ss_pred eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCC----EEEEEEcCCCceEEE
Confidence 5666665432 3544443332111 11133333455666666554 499999988888765
No 107
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.18 E-value=0.32 Score=44.94 Aligned_cols=137 Identities=8% Similarity=-0.018 Sum_probs=68.3
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCcee-eEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYK-CVGV 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~-~~~~ 186 (371)
..+..+|..+.+-...-..............++++++.|+.+. .+.+||..+.+-.. .+..-... .+++
T Consensus 130 g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~--------~i~iwd~~~~~~~~--~~~~h~~~V~~v~ 199 (410)
T 1vyh_C 130 ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM--------TIKLWDFQGFECIR--TMHGHDHNVSSVS 199 (410)
T ss_dssp SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS--------CCCEEETTSSCEEE--CCCCCSSCEEEEE
T ss_pred CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC--------eEEEEeCCCCceeE--EEcCCCCCEEEEE
Confidence 4678888877654322111111111111122567788888763 46778887654322 22211111 1222
Q ss_pred E-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCCccCeEE
Q 042957 187 T-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 187 ~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 264 (371)
. -++..++.|+.+ ..+.+||+.+..-... +.........+.. .++++++.|+.+. .+.
T Consensus 200 ~~p~~~~l~s~s~D--------------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~----~v~ 259 (410)
T 1vyh_C 200 IMPNGDHIVSASRD--------------KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQ----TVR 259 (410)
T ss_dssp ECSSSSEEEEEETT--------------SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS----CEE
T ss_pred EeCCCCEEEEEeCC--------------CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCC----eEE
Confidence 2 255566666543 4788999988753222 1111111111222 2566777776554 488
Q ss_pred EEeCCCCceE
Q 042957 265 SYDGELNMWD 274 (371)
Q Consensus 265 ~yd~~~~~W~ 274 (371)
+||+.+..-.
T Consensus 260 vwd~~~~~~~ 269 (410)
T 1vyh_C 260 VWVVATKECK 269 (410)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcee
Confidence 9998876543
No 108
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.17 E-value=0.28 Score=44.93 Aligned_cols=145 Identities=10% Similarity=-0.009 Sum_probs=72.9
Q ss_pred ceEEEEECCCCeeeecCC-CCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC-CCC-CCceee
Q 042957 108 AWVLRYNVKSNEWTRCAP-LSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP-NMS-TLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~-~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~-~~p-~~~~~~ 183 (371)
..+..+|..+.+....-. ......-.+++. -++++++.|+.+ ..+.+||+.+.+-...- ... ..+...
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 225 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD--------KRVRVIEPRKGTVVAEKDRPHEGTRPVH 225 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT--------SEEEEEETTTTEEEEEEECSSCSSSCCE
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC--------CcEEEEeCCCCceeeeeccCCCCCcceE
Confidence 458888988876543211 111111112222 266777777764 46899999886543221 111 111222
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCce-eeccccccCCCCCCeEEEE--CCEEEEEcCCCCCcc
Q 042957 184 VGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKW-DLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWK 260 (371)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~ 260 (371)
....-++++++.|..... ...+.+||+.+..- .....+.... ....++.. ++.|++.|+.++
T Consensus 226 ~~~~~~~~~l~~g~~~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~g~~dg--- 290 (402)
T 2aq5_A 226 AVFVSEGKILTTGFSRMS-----------ERQVALWDTKHLEEPLSLQELDTSS-GVLLPFFDPDTNIVYLCGKGDS--- 290 (402)
T ss_dssp EEECSTTEEEEEEECTTC-----------CEEEEEEETTBCSSCSEEEECCCCS-SCEEEEEETTTTEEEEEETTCS---
T ss_pred EEEcCCCcEEEEeccCCC-----------CceEEEEcCccccCCceEEeccCCC-ceeEEEEcCCCCEEEEEEcCCC---
Confidence 223346777766622111 15789999987542 1111111111 11223333 345666665444
Q ss_pred CeEEEEeCCCCc--eEee
Q 042957 261 GHIESYDGELNM--WDEV 276 (371)
Q Consensus 261 ~~~~~yd~~~~~--W~~~ 276 (371)
.+.+||..+.+ ...+
T Consensus 291 -~i~i~d~~~~~~~~~~l 307 (402)
T 2aq5_A 291 -SIRYFEITSEAPFLHYL 307 (402)
T ss_dssp -CEEEEEECSSTTCEEEE
T ss_pred -eEEEEEecCCCcceEee
Confidence 49999998876 4444
No 109
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.14 E-value=0.14 Score=45.67 Aligned_cols=139 Identities=13% Similarity=0.034 Sum_probs=63.8
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCe-eEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDF-ACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
..+..||..+.+-... +....... +++. -+++.++.|+.+ ..+.+||..+.+....-..+.... ...
T Consensus 54 g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~v~-~~~ 122 (369)
T 3zwl_B 54 SSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSAD--------YSIKLWDVSNGQCVATWKSPVPVK-RVE 122 (369)
T ss_dssp SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT--------TEEEEEETTTCCEEEEEECSSCEE-EEE
T ss_pred CEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCC--------CeEEEEECCCCcEEEEeecCCCeE-EEE
Confidence 3567777766543221 11111111 1222 256666777664 368899988776543322222211 111
Q ss_pred EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCce----eeccc-----cccCCC--CCCeEEE-ECCEEEEEc
Q 042957 186 VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKW----DLVAR-----MWQLDI--PPNQIVE-VDNRLFSSG 253 (371)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W----~~~~~-----~~~~~~--~~~~~~~-~~~~iyv~G 253 (371)
..-+++.+++++..... ....+..||+.+..- ..... +..... ....++. -+++++++|
T Consensus 123 ~~~~~~~l~~~~~~~~~---------~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 123 FSPCGNYFLAILDNVMK---------NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp ECTTSSEEEEEECCBTT---------BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred EccCCCEEEEecCCccC---------CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 22345555555433111 124677787765431 11110 000000 1111222 245566666
Q ss_pred CCCCCccCeEEEEeCCC
Q 042957 254 DCLKAWKGHIESYDGEL 270 (371)
Q Consensus 254 G~~~~~~~~~~~yd~~~ 270 (371)
+... .+.+||+.+
T Consensus 194 ~~dg----~i~i~d~~~ 206 (369)
T 3zwl_B 194 HKDG----KISKYDVSN 206 (369)
T ss_dssp ETTS----EEEEEETTT
T ss_pred cCCC----EEEEEECCC
Confidence 5444 599999987
No 110
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.12 E-value=0.37 Score=43.68 Aligned_cols=134 Identities=4% Similarity=-0.080 Sum_probs=71.6
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCC-eeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCC-ceee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYD-FACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTL-RYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-~~~~ 183 (371)
..+..||..+.+....-........ .+++.. ++.+++.|+.+ ..+.+||..+.....+...... ..-.
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~v~ 167 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR--------GATTLRDFSGSVIQVFAKTDSWDYWYC 167 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT--------TEEEEEETTSCEEEEEECCCCSSCCEE
T ss_pred CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC--------CEEEEEECCCCceEEEeccCCCCCCeE
Confidence 4688889887776554332111112 223332 44777777665 4688999987666555432211 1111
Q ss_pred EEE-EECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCE-EEEEcCCCCCcc
Q 042957 184 VGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNR-LFSSGDCLKAWK 260 (371)
Q Consensus 184 ~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~ 260 (371)
.++ .-++++++.|+.+ ..+..||+.......+.... .....++.. +++ +++.|+.+.
T Consensus 168 ~~~~~~~~~~l~~~~~d--------------~~i~i~d~~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d~--- 227 (383)
T 3ei3_B 168 CVDVSVSRQMLATGDST--------------GRLLLLGLDGHEIFKEKLHK---AKVTHAEFNPRCDWLMATSSVDA--- 227 (383)
T ss_dssp EEEEETTTTEEEEEETT--------------SEEEEEETTSCEEEEEECSS---SCEEEEEECSSCTTEEEEEETTS---
T ss_pred EEEECCCCCEEEEECCC--------------CCEEEEECCCCEEEEeccCC---CcEEEEEECCCCCCEEEEEeCCC---
Confidence 222 3356666666533 47888998544333332111 111123332 334 777776554
Q ss_pred CeEEEEeCCC
Q 042957 261 GHIESYDGEL 270 (371)
Q Consensus 261 ~~~~~yd~~~ 270 (371)
.+.+||+.+
T Consensus 228 -~i~iwd~~~ 236 (383)
T 3ei3_B 228 -TVKLWDLRN 236 (383)
T ss_dssp -EEEEEEGGG
T ss_pred -EEEEEeCCC
Confidence 499999986
No 111
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.07 E-value=0.5 Score=42.78 Aligned_cols=107 Identities=7% Similarity=-0.017 Sum_probs=55.4
Q ss_pred EEEEEcCCCCCCCCCCCceEEEEeCCCCc------eEeCCCCC----CCceeeEEEE----ECCEE-EEEecccCCCCCC
Q 042957 141 KIYVAGGKSNLFSAKGTASAEVYHPELDQ------WTPLPNMS----TLRYKCVGVT----WQGKI-HVVSGFAQRADSD 205 (371)
Q Consensus 141 ~lyv~GG~~~~~~~~~~~~~~~yd~~t~~------W~~~~~~p----~~~~~~~~~~----~~~~l-yv~GG~~~~~~~~ 205 (371)
++++.|+.+ ..+.+||..+.. +..+...+ .......... -+++. ++.|+..
T Consensus 82 ~~l~s~~~d--------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------ 147 (397)
T 1sq9_A 82 CLVATTSFS--------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------ 147 (397)
T ss_dssp EEEEEEETT--------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT------
T ss_pred cEEEEEcCC--------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC------
Confidence 778887765 358888887766 66665443 1111122223 34555 6666543
Q ss_pred CCccccccCeeEEEECCC------Cc---eeeccccc-------cCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeC
Q 042957 206 GSVHFTERSSAEVYDTQA------GK---WDLVARMW-------QLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDG 268 (371)
Q Consensus 206 ~~~~~~~~~~v~~yd~~t------~~---W~~~~~~~-------~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~ 268 (371)
..+.+||+.+ .. |.....+. ........++.. ++ +++.|+... .+.+||+
T Consensus 148 --------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg----~i~i~d~ 214 (397)
T 1sq9_A 148 --------GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG----TVQISEL 214 (397)
T ss_dssp --------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS----EEEEEET
T ss_pred --------CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC----cEEEEEC
Confidence 3577788776 22 21111111 011112234443 45 666666544 5999999
Q ss_pred CCCceE
Q 042957 269 ELNMWD 274 (371)
Q Consensus 269 ~~~~W~ 274 (371)
.+.+-.
T Consensus 215 ~~~~~~ 220 (397)
T 1sq9_A 215 STLRPL 220 (397)
T ss_dssp TTTEEE
T ss_pred CCCcee
Confidence 876543
No 112
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.04 E-value=0.18 Score=45.38 Aligned_cols=179 Identities=7% Similarity=0.094 Sum_probs=88.6
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+..||..++.|.....+.. .|...-.+++.. ++..++.|+.+ ..+..+|..
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~---~h~~~v~~~~~sp~g~~l~s~s~D-----------------------~~v~iw~~~ 91 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSE---GHQRTVRKVAWSPCGNYLASASFD-----------------------ATTCIWKKN 91 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECS---SCSSCEEEEEECTTSSEEEEEETT-----------------------SCEEEEEEC
T ss_pred CeEEEEEcCCCcceeeeeecc---ccCCcEEEEEECCCCCEEEEEECC-----------------------CcEEEEEcc
Confidence 347788888777653322110 122222334443 46677777664 345566666
Q ss_pred CCeeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCC-ceEeCCCCCCCcee-eEEE-EECCE
Q 042957 117 SNEWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELD-QWTPLPNMSTLRYK-CVGV-TWQGK 191 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~~~~-~~~~-~~~~~ 191 (371)
+..++.+..+......-..+. -++++++.|+.+ ..+.+||..+. .+..+..+...... ..++ .-+++
T Consensus 92 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D--------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 92 QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD--------KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT--------SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC--------CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 665544433321111112222 256777777775 35778887654 23322221111111 1112 22556
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeC
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDG 268 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~ 268 (371)
+++.|+.+ ..+.+||..+..|..+..+..-......++.. +++.++.|+.+.. +.+||.
T Consensus 164 ~l~s~s~d--------------~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~----v~iW~~ 223 (345)
T 3fm0_A 164 LLASASYD--------------DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT----VRIWRQ 223 (345)
T ss_dssp CEEEEETT--------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC----EEEEEE
T ss_pred EEEEEeCC--------------CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe----EEEecc
Confidence 66666543 46788998888886554433211111123332 5667777765543 777664
No 113
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.99 E-value=0.54 Score=41.02 Aligned_cols=179 Identities=7% Similarity=-0.086 Sum_probs=90.3
Q ss_pred ceEEEEECCCCe--eeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCCCCCCceee
Q 042957 108 AWVLRYNVKSNE--WTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~~~~ 183 (371)
..+..+|.++++ |+.-..-. .......+.-+++|++.+. ..+..||+ +. .|+.-. +.....+
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~~----------~~V~~~d~-~G~~~W~~~~--~~~~~~~ 80 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSYS----------KGAKMITR-DGRELWNIAA--PAGCEMQ 80 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEECB----------SEEEEECT-TSCEEEEEEC--CTTCEEE
T ss_pred CEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeCC----------CCEEEECC-CCCEEEEEcC--CCCcccc
Confidence 567777876664 55432111 1223334444788888321 35888998 44 465433 2111222
Q ss_pred EE-EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCC-ceeecc--ccccCCCCCCe-EEEECCEEEEEcCCCCC
Q 042957 184 VG-VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG-KWDLVA--RMWQLDIPPNQ-IVEVDNRLFSSGDCLKA 258 (371)
Q Consensus 184 ~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~-~W~~~~--~~~~~~~~~~~-~~~~~~~iyv~GG~~~~ 258 (371)
.+ ...++++++..... ...++.+|+... .|+... ........... ....++.+++.....
T Consensus 81 ~~~~~~dG~~lv~~~~~-------------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~-- 145 (276)
T 3no2_A 81 TARILPDGNALVAWCGH-------------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT-- 145 (276)
T ss_dssp EEEECTTSCEEEEEEST-------------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT--
T ss_pred ccEECCCCCEEEEecCC-------------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC--
Confidence 22 23467777665321 135777887443 233221 11111111112 233456666654432
Q ss_pred ccCeEEEEeCCCCc-eEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEe
Q 042957 259 WKGHIESYDGELNM-WDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIF 337 (371)
Q Consensus 259 ~~~~~~~yd~~~~~-W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~ 337 (371)
..+.+||++-+. |+.- .. . ....+....++.++|.+... ..|..+
T Consensus 146 --~~v~~~d~~G~~~w~~~-----~~-~-----------------~~~~~~~~~~g~~~v~~~~~---------~~v~~~ 191 (276)
T 3no2_A 146 --SEVREIAPNGQLLNSVK-----LS-G-----------------TPFSSAFLDNGDCLVACGDA---------HCFVQL 191 (276)
T ss_dssp --TEEEEECTTSCEEEEEE-----CS-S-----------------CCCEEEECTTSCEEEECBTT---------SEEEEE
T ss_pred --CEEEEECCCCCEEEEEE-----CC-C-----------------CccceeEcCCCCEEEEeCCC---------CeEEEE
Confidence 359999998433 5443 11 0 11123333467888776432 358899
Q ss_pred eccccccccccc
Q 042957 338 DTAAKSDAWRSF 349 (371)
Q Consensus 338 d~~~~~~~W~~~ 349 (371)
|+++.+..|+.-
T Consensus 192 d~~tG~~~w~~~ 203 (276)
T 3no2_A 192 NLESNRIVRRVN 203 (276)
T ss_dssp CTTTCCEEEEEE
T ss_pred eCcCCcEEEEec
Confidence 999665678864
No 114
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.98 E-value=0.18 Score=44.95 Aligned_cols=94 Identities=9% Similarity=0.082 Sum_probs=48.3
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCe-eEEE-E-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC-CCCCCCcee-
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDF-ACTV-C-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL-PNMSTLRYK- 182 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~-~~~~-~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~~~~- 182 (371)
..+..||..+.+-... +....... +++. - ++.+++.|+.+ ..+.+||..+.+-... ..+......
T Consensus 95 g~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 95 GIIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKD--------HALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp CEEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred CEEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCC--------CeEEEEEeecCeEEEEecccccccCce
Confidence 4688888876543221 11111111 1222 2 56777787765 3588999987654332 111111111
Q ss_pred eEEEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc
Q 042957 183 CVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK 225 (371)
Q Consensus 183 ~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~ 225 (371)
..++. -+++.++.|+.+ ..+.+||+.+.+
T Consensus 165 ~~~~~~~~~~~l~~~~~d--------------g~i~i~d~~~~~ 194 (366)
T 3k26_A 165 LSADYDLLGEKIMSCGMD--------------HSLKLWRINSKR 194 (366)
T ss_dssp EEEEECTTSSEEEEEETT--------------SCEEEEESCSHH
T ss_pred eEEEECCCCCEEEEecCC--------------CCEEEEECCCCc
Confidence 12222 245566666543 468889988654
No 115
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.98 E-value=0.69 Score=40.68 Aligned_cols=104 Identities=18% Similarity=0.076 Sum_probs=53.2
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE-EECCEEEEEecccCCCCCCCCccccccCeeEE
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAEV 218 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~ 218 (371)
..+++.|+.+ ..+.+||..+.+....-.-..... .+++ .-++++++.|+.+ ..+.+
T Consensus 185 ~~~~~s~~~d--------~~i~i~d~~~~~~~~~~~~h~~~v-~~~~~s~~~~~l~s~s~D--------------g~i~i 241 (340)
T 4aow_A 185 NPIIVSCGWD--------KLVKVWNLANCKLKTNHIGHTGYL-NTVTVSPDGSLCASGGKD--------------GQAML 241 (340)
T ss_dssp SCEEEEEETT--------SCEEEEETTTTEEEEEECCCSSCE-EEEEECTTSSEEEEEETT--------------CEEEE
T ss_pred CcEEEEEcCC--------CEEEEEECCCCceeeEecCCCCcE-EEEEECCCCCEEEEEeCC--------------CeEEE
Confidence 3455666654 357888888765433211111111 1222 2356677777643 46788
Q ss_pred EECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 219 YDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 219 yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
||+.+.+-... +.... ....++...+..++.++.++ .+.+||.++..-
T Consensus 242 wd~~~~~~~~~--~~~~~-~v~~~~~~~~~~~~~~~~d~----~i~iwd~~~~~~ 289 (340)
T 4aow_A 242 WDLNEGKHLYT--LDGGD-IINALCFSPNRYWLCAATGP----SIKIWDLEGKII 289 (340)
T ss_dssp EETTTTEEEEE--EECSS-CEEEEEECSSSSEEEEEETT----EEEEEETTTTEE
T ss_pred EEeccCceeee--ecCCc-eEEeeecCCCCceeeccCCC----EEEEEECCCCeE
Confidence 99887643222 22111 11233334444455555433 588999887653
No 116
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.92 E-value=0.56 Score=42.73 Aligned_cols=109 Identities=8% Similarity=-0.023 Sum_probs=55.6
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCCc------eE-eCCCCC-CCceeeEEEEE-C-CEEEEEecccCCCCCCCCcc
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELDQ------WT-PLPNMS-TLRYKCVGVTW-Q-GKIHVVSGFAQRADSDGSVH 209 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~------W~-~~~~~p-~~~~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~ 209 (371)
+.+++.|+.+ ..+.+||..+.. -. .+.... ....-..++.. + +.+++.|+..
T Consensus 126 ~~~l~s~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------- 187 (416)
T 2pm9_A 126 DNVLASGGNN--------GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS---------- 187 (416)
T ss_dssp TTBEEEECSS--------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS----------
T ss_pred CCEEEEEcCC--------CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC----------
Confidence 6777777765 358888887764 11 111111 11111222222 3 5677777543
Q ss_pred ccccCeeEEEECCCCceeeccccccC----CCCCCeEEEEC--CEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 210 FTERSSAEVYDTQAGKWDLVARMWQL----DIPPNQIVEVD--NRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 210 ~~~~~~v~~yd~~t~~W~~~~~~~~~----~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
..+.+||+.+.+-...-..... ......++... ..+++.++... ....+.+||+.+.
T Consensus 188 ----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 188 ----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD-NDPSILIWDLRNA 250 (416)
T ss_dssp ----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS-SSCCCCEEETTST
T ss_pred ----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC-CCceEEEEeCCCC
Confidence 4688999988764433222211 11111233332 35677665443 1114889998874
No 117
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.88 E-value=0.44 Score=42.02 Aligned_cols=142 Identities=10% Similarity=0.046 Sum_probs=65.5
Q ss_pred ceEEEEECC--CCeeeecCCCCCCCCCeeEEE-ECC-EEEEEcCCCCCCCCCCCceEEEEeCCCC-ceEeCCCCCCCcee
Q 042957 108 AWVLRYNVK--SNEWTRCAPLSVPRYDFACTV-CDN-KIYVAGGKSNLFSAKGTASAEVYHPELD-QWTPLPNMSTLRYK 182 (371)
Q Consensus 108 ~~v~~yd~~--~~~W~~~~~~~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~~~~ 182 (371)
..+..|++. +++++.+..++....-..++. -++ .||+.+..+ ..+.+||.... ..+.+..++....-
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--------~~i~~~d~~~~~~~~~~~~~~~~~~~ 131 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--------GNVSVTRLEDGLPVGVVDVVEGLDGC 131 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--------TEEEEEEEETTEEEEEEEEECCCTTB
T ss_pred CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC--------CeEEEEECCCCccccccccccCCCCc
Confidence 456666665 677766544332222222332 234 466654322 45788877322 12222211111111
Q ss_pred eEEEE-ECC-EEEEEecccCCCCCCCCccccccCeeEEEECCC-Cceeecc--ccccC-CCCCCeEEEE-CC-EEEEEcC
Q 042957 183 CVGVT-WQG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQA-GKWDLVA--RMWQL-DIPPNQIVEV-DN-RLFSSGD 254 (371)
Q Consensus 183 ~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t-~~W~~~~--~~~~~-~~~~~~~~~~-~~-~iyv~GG 254 (371)
..++. -++ .||+.+... ..+.+||+.+ .+...+. ..... ......++.. ++ .+|+.+.
T Consensus 132 ~~~~~s~dg~~l~~~~~~~--------------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 132 HSANISPDNRTLWVPALKQ--------------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp CCCEECTTSSEEEEEEGGG--------------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET
T ss_pred eEEEECCCCCEEEEecCCC--------------CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC
Confidence 22222 233 577665222 4688899887 6665432 11111 1111123332 33 4777654
Q ss_pred CCCCccCeEEEEeCC--CCceEe
Q 042957 255 CLKAWKGHIESYDGE--LNMWDE 275 (371)
Q Consensus 255 ~~~~~~~~~~~yd~~--~~~W~~ 275 (371)
... .+.+||+. +..++.
T Consensus 198 ~~~----~i~~~~~~~~~g~~~~ 216 (343)
T 1ri6_A 198 LNS----SVDVWELKDPHGNIEC 216 (343)
T ss_dssp TTT----EEEEEESSCTTSCCEE
T ss_pred CCC----EEEEEEecCCCCcEEE
Confidence 333 58888884 344443
No 118
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.87 E-value=1.4 Score=42.79 Aligned_cols=120 Identities=11% Similarity=0.168 Sum_probs=70.3
Q ss_pred EEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC-CCC--eeeecCCCCCC--------CCCeeEEE
Q 042957 69 SIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV-KSN--EWTRCAPLSVP--------RYDFACTV 137 (371)
Q Consensus 69 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~-~~~--~W~~~~~~~~~--------r~~~~~~~ 137 (371)
+-++.++.||+.... ...++.+|. .+. .|+.-...... ....+.++
T Consensus 57 ~P~v~~g~vyv~~~~-----------------------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF-----------------------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY 113 (571)
T ss_dssp CCEEETTEEEEECST-----------------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE
T ss_pred ccEEECCEEEEEeCC-----------------------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE
Confidence 345569999998652 235888888 665 48764332211 11234567
Q ss_pred ECCEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeC-CCCCCC-ceeeEEEEECCEEEEEecccCCCCCCCCcccccc
Q 042957 138 CDNKIYVAGGKSNLFSAKGTASAEVYHPELD--QWTPL-PNMSTL-RYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTER 213 (371)
Q Consensus 138 ~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~-~~~p~~-~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~ 213 (371)
.+++||+.... ..++.+|.++. .|+.- ...+.. ....+.++.+++||+..+..... ..
T Consensus 114 ~~~~v~v~~~d---------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~---------~~ 175 (571)
T 2ad6_A 114 GAGQIVKKQAN---------GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG---------VR 175 (571)
T ss_dssp ETTEEEEECTT---------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT---------CC
T ss_pred ECCEEEEEeCC---------CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccC---------CC
Confidence 79999987432 46899999876 58753 221111 11222345788888755321111 12
Q ss_pred CeeEEEECCCCc--eeec
Q 042957 214 SSAEVYDTQAGK--WDLV 229 (371)
Q Consensus 214 ~~v~~yd~~t~~--W~~~ 229 (371)
..+..||.++.+ |+.-
T Consensus 176 g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 176 GAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp CEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCcEEEEEc
Confidence 578999998764 7643
No 119
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.86 E-value=0.76 Score=45.60 Aligned_cols=152 Identities=11% Similarity=0.003 Sum_probs=78.3
Q ss_pred cceEEEEECCCCeeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCC-ceEeCCCCCCCc---
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELD-QWTPLPNMSTLR--- 180 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~~--- 180 (371)
...++++|..+.+-..+............+. -+++.++++..+ .......+..+|..+. ..+.+.......
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~---~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN---RAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC---TTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC---CCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 4679999999887665543211111212222 255544443332 1123457899999887 665543111110
Q ss_pred -eeeEEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE---CCEEEEEcC
Q 042957 181 -YKCVGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV---DNRLFSSGD 254 (371)
Q Consensus 181 -~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~---~~~iyv~GG 254 (371)
.......- ++++++.+...+ ...++.+|........+..- ......+..+ ++.||+.+.
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g------------~~~l~~~~~~~~~~~~l~~~---~~~v~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDG------------WNHLYLYDTTGRLIRQVTKG---EWEVTNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTS------------SCEEEEEETTSCEEEECCCS---SSCEEEEEEECTTSSEEEEEES
T ss_pred ccCCceeecCCCCEEEEEEccCC------------ccEEEEEECCCCEEEecCCC---CeEEEeeeEEcCCCCEEEEEec
Confidence 01112233 777655554332 24678888766666555321 1111111222 345666655
Q ss_pred CCCCccCeEEEEeCCCCceEee
Q 042957 255 CLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 255 ~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
........++.+|..+...+.+
T Consensus 376 ~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 376 EASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp SSCTTCBEEEEEETTCCCCEES
T ss_pred CCCCceEEEEEEEcCCCCceec
Confidence 4332235799999988776666
No 120
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.86 E-value=0.38 Score=44.65 Aligned_cols=187 Identities=7% Similarity=-0.070 Sum_probs=100.3
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCE-EEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDS-VYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..++.+|..+++...+...+. ...+++.. +++ |++.+..+ ....++.+|.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~-------~~~~~~~spdg~~la~~~~~~---------------------g~~~i~~~d~ 254 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR-------HNGAPAFSPDGSKLAFALSKT---------------------GSLNLYVMDL 254 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS-------CEEEEEECTTSSEEEEEECTT---------------------SSCEEEEEET
T ss_pred cEEEEEECCCCcEEEeecCCC-------cccCEEEcCCCCEEEEEEecC---------------------CCceEEEEEC
Confidence 468889998887665543331 12233333 444 55444432 1357999999
Q ss_pred CCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE-EECCEEEE
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV-TWQGKIHV 194 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv 194 (371)
.+++...+...... .......-+++.+++++... ....++.+|..+.+-+.+... .......+ .-+++.++
T Consensus 255 ~~~~~~~l~~~~~~-~~~~~~spdg~~l~~~s~~~-----g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~ 326 (415)
T 2hqs_A 255 ASGQIRQVTDGRSN-NTEPTWFPDSQNLAFTSDQA-----GRPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMV 326 (415)
T ss_dssp TTCCEEECCCCSSC-EEEEEECTTSSEEEEEECTT-----SSCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEE
T ss_pred CCCCEEeCcCCCCc-ccceEECCCCCEEEEEECCC-----CCcEEEEEECCCCCEEEEecC--CCcccCeEECCCCCEEE
Confidence 98877665433211 11111122555444433211 135789999988775554321 12222222 23555555
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
+++.... ...+.++|+.+.+...+.... ....++.. +++.+++++.... ...++++|+.....
T Consensus 327 ~~~~~~g-----------~~~i~~~d~~~~~~~~l~~~~----~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 327 MVSSNGG-----------QQHIAKQDLATGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTDGRFK 390 (415)
T ss_dssp EEEECSS-----------CEEEEEEETTTCCEEECCCSS----SCEEEEECTTSSEEEEEEEETT-EEEEEEEETTSCCE
T ss_pred EEECcCC-----------ceEEEEEECCCCCEEEecCCC----CcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECCCCcE
Confidence 5543321 147899999998876654321 11223332 5665666543221 23699999988877
Q ss_pred Eee
Q 042957 274 DEV 276 (371)
Q Consensus 274 ~~~ 276 (371)
+.+
T Consensus 391 ~~l 393 (415)
T 2hqs_A 391 ARL 393 (415)
T ss_dssp EEC
T ss_pred EEe
Confidence 777
No 121
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.83 E-value=0.59 Score=40.76 Aligned_cols=175 Identities=10% Similarity=-0.019 Sum_probs=88.9
Q ss_pred cceeEEeCCCCc--eeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEE
Q 042957 38 NWLASYNPSNNT--WSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYN 114 (371)
Q Consensus 38 ~~~~~yd~~~~~--W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 114 (371)
+.+..+|+++.+ |+.-..-. ...+.+... ++++|+.+ ...+..||
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~-------~~~~~~~~~pdG~ilvs~-------------------------~~~V~~~d 62 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKG-------WECNSVAATKAGEILFSY-------------------------SKGAKMIT 62 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTT-------CCCCEEEECTTSCEEEEC-------------------------BSEEEEEC
T ss_pred CEEEEEECCCCeEEEEeCCCcc-------CCCcCeEECCCCCEEEeC-------------------------CCCEEEEC
Confidence 568899997876 66543221 012244443 67888732 13488888
Q ss_pred CCCC-eeeecCCCCCCCCCeeEE-EECCEEEEEcCCCCCCCCCCCceEEEEeCCCC-ceEeC--CCCCCC--ceeeEEEE
Q 042957 115 VKSN-EWTRCAPLSVPRYDFACT-VCDNKIYVAGGKSNLFSAKGTASAEVYHPELD-QWTPL--PNMSTL--RYKCVGVT 187 (371)
Q Consensus 115 ~~~~-~W~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~-~W~~~--~~~p~~--~~~~~~~~ 187 (371)
+..+ .|+.-.+ ....-+++. ..++++++..... ...+..+|+.-+ .|+.. ...+.. ........
T Consensus 63 ~~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~-------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~ 133 (276)
T 3no2_A 63 RDGRELWNIAAP--AGCEMQTARILPDGNALVAWCGH-------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKN 133 (276)
T ss_dssp TTSCEEEEEECC--TTCEEEEEEECTTSCEEEEEEST-------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEEC
T ss_pred CCCCEEEEEcCC--CCccccccEECCCCCEEEEecCC-------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceEC
Confidence 8322 3654331 111122222 2366666664321 136777887443 23321 111111 11122234
Q ss_pred ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCC-ceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEE
Q 042957 188 WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG-KWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIES 265 (371)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~-~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~ 265 (371)
.++.+++.... ...+.+||++-+ .|+.-.. .. .+++... ++.+++.+.... .+.+
T Consensus 134 ~~G~~lv~~~~--------------~~~v~~~d~~G~~~w~~~~~----~~-~~~~~~~~~g~~~v~~~~~~----~v~~ 190 (276)
T 3no2_A 134 KKGNYLVPLFA--------------TSEVREIAPNGQLLNSVKLS----GT-PFSSAFLDNGDCLVACGDAH----CFVQ 190 (276)
T ss_dssp TTSCEEEEETT--------------TTEEEEECTTSCEEEEEECS----SC-CCEEEECTTSCEEEECBTTS----EEEE
T ss_pred CCCCEEEEecC--------------CCEEEEECCCCCEEEEEECC----CC-ccceeEcCCCCEEEEeCCCC----eEEE
Confidence 46666665531 147899999822 3554332 11 2234444 678888765433 5999
Q ss_pred EeCCCCc--eEee
Q 042957 266 YDGELNM--WDEV 276 (371)
Q Consensus 266 yd~~~~~--W~~~ 276 (371)
||+++.+ |+.-
T Consensus 191 ~d~~tG~~~w~~~ 203 (276)
T 3no2_A 191 LNLESNRIVRRVN 203 (276)
T ss_dssp ECTTTCCEEEEEE
T ss_pred EeCcCCcEEEEec
Confidence 9999544 6553
No 122
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.81 E-value=0.23 Score=46.31 Aligned_cols=177 Identities=10% Similarity=-0.016 Sum_probs=88.1
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
.|..||..+.+-..+.... .|...-.+++.. ++.+++.|+.+ ..+-++|..
T Consensus 143 ~i~lWd~~~~~~~~~~~~~----gH~~~V~~l~f~p~~~~~l~s~s~D-----------------------~~v~iwd~~ 195 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGI----GAGGSITGLKFNPLNTNQFYASSME-----------------------GTTRLQDFK 195 (435)
T ss_dssp CEEEECSSCCSCCEEECCC----SSSCCCCEEEECSSCTTEEEEECSS-----------------------SCEEEEETT
T ss_pred EEEEEECCCCCceeEEEcc----CCCCCEEEEEEeCCCCCEEEEEeCC-----------------------CEEEEeecc
Confidence 4788888776543332221 122233355553 45666777664 446777887
Q ss_pred CCeeeecCCCCCCC-CCeeEE-EECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE--C-CE
Q 042957 117 SNEWTRCAPLSVPR-YDFACT-VCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW--Q-GK 191 (371)
Q Consensus 117 ~~~W~~~~~~~~~r-~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~-~~ 191 (371)
++....+....... ...++. .-++++++.|+.+ ..+.+||..... +..+..-......+.. + ..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d--------g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV--------GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS--------SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSS
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC--------CcEeeeccCcce---eEEEecccceEEeeeecCCCce
Confidence 77655443322111 112222 3367788888775 358889986543 2222211111111222 2 34
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCC-CeEEE-ECCEEEEEcCCCCCccCeEEEEeCC
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPP-NQIVE-VDNRLFSSGDCLKAWKGHIESYDGE 269 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~yd~~ 269 (371)
+++.|+.+ ..+.+||+.+.+-............. .+++. -+++.++.|+.++ .+.+||..
T Consensus 265 ~~~s~s~d--------------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~----~i~iwd~~ 326 (435)
T 4e54_B 265 FLATASVD--------------QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS----EIRVYSAS 326 (435)
T ss_dssp EEEEEETT--------------SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS----CEEEEESS
T ss_pred EEEEecCc--------------ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC----EEEEEECC
Confidence 66666543 35678888765432211111111100 01111 1566677776554 48999987
Q ss_pred CC
Q 042957 270 LN 271 (371)
Q Consensus 270 ~~ 271 (371)
+.
T Consensus 327 ~~ 328 (435)
T 4e54_B 327 QW 328 (435)
T ss_dssp SS
T ss_pred CC
Confidence 63
No 123
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.78 E-value=0.82 Score=39.25 Aligned_cols=222 Identities=14% Similarity=-0.003 Sum_probs=116.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+.++|........+...+.... ....-++++.. ++.||+.-.. ...+++||+
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~~-----------------------~~~I~~~~~ 65 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDIS-----------------------EPSIGRASL 65 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEETT-----------------------TTEEEEEES
T ss_pred CeEEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEECC-----------------------CCEEEEEec
Confidence 357888876655433211110000 01223466665 4789988432 357899998
Q ss_pred CCCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE--CCE
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW--QGK 191 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~ 191 (371)
....-..+..... ..-+.+++. +++||+.-.. ...+.++++....-+.+....... -..+++. +++
T Consensus 66 ~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~g~~~~~~~~~~~~~-P~~i~vd~~~g~ 135 (267)
T 1npe_A 66 HGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQ--------LDRIEVAKMDGTQRRVLFDTGLVN-PRGIVTDPVRGN 135 (267)
T ss_dssp SSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECSSCSS-EEEEEEETTTTE
T ss_pred CCCCcEEEEECCC-CCccEEEEEecCCeEEEEECC--------CCEEEEEEcCCCCEEEEEECCCCC-ccEEEEeeCCCE
Confidence 7764333221111 122344443 5799998432 257889988754433332111111 1233333 688
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCC
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGE 269 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~ 269 (371)
||+...... ...++++++....-+.+.... .....+++.. +++||+..... +.+.+||+.
T Consensus 136 lyv~~~~~~------------~~~I~~~~~dg~~~~~~~~~~--~~~P~gia~d~~~~~lyv~d~~~----~~I~~~~~~ 197 (267)
T 1npe_A 136 LYWTDWNRD------------NPKIETSHMDGTNRRILAQDN--LGLPNGLTFDAFSSQLCWVDAGT----HRAECLNPA 197 (267)
T ss_dssp EEEEECCSS------------SCEEEEEETTSCCCEEEECTT--CSCEEEEEEETTTTEEEEEETTT----TEEEEEETT
T ss_pred EEEEECCCC------------CcEEEEEecCCCCcEEEEECC--CCCCcEEEEcCCCCEEEEEECCC----CEEEEEecC
Confidence 999863211 146788887654333332111 1122345554 57899885433 369999998
Q ss_pred CCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 270 LNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 270 ~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
...-..+. ..+.. -.+++.-++.||+.... ...|..+|+++.
T Consensus 198 g~~~~~~~----~~~~~------------------P~gi~~d~~~lyva~~~---------~~~v~~~d~~~g 239 (267)
T 1npe_A 198 QPGRRKVL----EGLQY------------------PFAVTSYGKNLYYTDWK---------TNSVIAMDLAIS 239 (267)
T ss_dssp EEEEEEEE----ECCCS------------------EEEEEEETTEEEEEETT---------TTEEEEEETTTT
T ss_pred CCceEEEe----cCCCC------------------ceEEEEeCCEEEEEECC---------CCeEEEEeCCCC
Confidence 64333330 12211 13455567899985421 246788998754
No 124
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.77 E-value=0.23 Score=43.75 Aligned_cols=135 Identities=8% Similarity=-0.001 Sum_probs=66.1
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe-CCCCCCCceeeEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP-LPNMSTLRYKCVGV 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~~~~~~~~ 186 (371)
..+..+|..+.+-...-..............++++++.|+.+ ..+.+||..+.+-.. +..-.. .-..++
T Consensus 35 g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d--------~~i~vwd~~~~~~~~~~~~h~~--~v~~~~ 104 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD--------FRIRVFNYNTGEKVVDFEAHPD--YIRSIA 104 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT--------SEEEEEETTTCCEEEEEECCSS--CEEEEE
T ss_pred CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC--------CEEEEEECCCCcEEEEEeCCCC--cEEEEE
Confidence 457777877665322111111111222223356677777765 468889988764321 111111 111222
Q ss_pred E-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeE
Q 042957 187 T-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHI 263 (371)
Q Consensus 187 ~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~ 263 (371)
. -++++++.|+.+ ..+.+||.+++. .....+..-.....+++.. ++.+++.|+.+. .+
T Consensus 105 ~~~~~~~l~sgs~D--------------~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~----~v 165 (304)
T 2ynn_A 105 VHPTKPYVLSGSDD--------------LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR----TV 165 (304)
T ss_dssp ECSSSSEEEEEETT--------------SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTS----EE
T ss_pred EcCCCCEEEEECCC--------------CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCC----eE
Confidence 2 245566666543 467888887652 2111111111111123332 456777777655 49
Q ss_pred EEEeCCCC
Q 042957 264 ESYDGELN 271 (371)
Q Consensus 264 ~~yd~~~~ 271 (371)
.+||+.+.
T Consensus 166 ~iwd~~~~ 173 (304)
T 2ynn_A 166 KVWSLGQS 173 (304)
T ss_dssp EEEETTCS
T ss_pred EEEECCCC
Confidence 99998653
No 125
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.75 E-value=0.19 Score=44.22 Aligned_cols=184 Identities=9% Similarity=0.007 Sum_probs=91.6
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+++||+.++.-..+. .+. .-.+++.. ++++|+.. ...+++||+.
T Consensus 35 ~~i~~~d~~~~~~~~~~-~~~-------~~~~i~~~~dG~l~v~~-------------------------~~~l~~~d~~ 81 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVT-MDA-------PVSSVALRQSGGYVATI-------------------------GTKFCALNWK 81 (297)
T ss_dssp TEEEEEETTTCCEEEEE-CSS-------CEEEEEEBTTSSEEEEE-------------------------TTEEEEEETT
T ss_pred CEEEEEECCCCcEEEEe-CCC-------ceEEEEECCCCCEEEEE-------------------------CCeEEEEECC
Confidence 45889999887654332 221 11134443 56666542 2358999999
Q ss_pred CCeeeecCCCCC--CCCCe--eEEEECCEEEEEcCCCC-C--CCCCCCceEEEEeCCCCceEeCC-CCCCCceeeEEEEE
Q 042957 117 SNEWTRCAPLSV--PRYDF--ACTVCDNKIYVAGGKSN-L--FSAKGTASAEVYHPELDQWTPLP-NMSTLRYKCVGVTW 188 (371)
Q Consensus 117 ~~~W~~~~~~~~--~r~~~--~~~~~~~~lyv~GG~~~-~--~~~~~~~~~~~yd~~t~~W~~~~-~~p~~~~~~~~~~~ 188 (371)
+++++.+..... +.... .++.-++++|+..-... . ........++++|+.. +...+. .+. ....++..
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~---~pngi~~s 157 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD---ISNGLDWS 157 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES---BEEEEEEC
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc---cccceEEc
Confidence 998877654321 22222 22223678777421110 0 0012235788888753 333321 111 11122222
Q ss_pred -CC-EEEEEecccCCCCCCCCccccccCeeEEEEC--CCCceee---ccccccCCCCCCeEEE-ECCEEEEEcCCCCCcc
Q 042957 189 -QG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDT--QAGKWDL---VARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWK 260 (371)
Q Consensus 189 -~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~--~t~~W~~---~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~ 260 (371)
++ .||+..... +.+++||. .+..... +..+........+++. -++.||+.....
T Consensus 158 pdg~~lyv~~~~~--------------~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~---- 219 (297)
T 3g4e_A 158 LDHKIFYYIDSLS--------------YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG---- 219 (297)
T ss_dssp TTSCEEEEEEGGG--------------TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT----
T ss_pred CCCCEEEEecCCC--------------CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC----
Confidence 34 588876422 46778875 5554432 1112111111224544 367888874322
Q ss_pred CeEEEEeCCCCceEee
Q 042957 261 GHIESYDGELNMWDEV 276 (371)
Q Consensus 261 ~~~~~yd~~~~~W~~~ 276 (371)
..+.+||+++.+....
T Consensus 220 ~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 220 GRVIRLDPVTGKRLQT 235 (297)
T ss_dssp TEEEEECTTTCCEEEE
T ss_pred CEEEEEcCCCceEEEE
Confidence 2499999997665443
No 126
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.82 Score=40.57 Aligned_cols=67 Identities=10% Similarity=-0.009 Sum_probs=36.3
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCC-ceE-eCCCCCCCceeeEEEE-ECCEEEEEecccCCCCCCCCccccccCe
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELD-QWT-PLPNMSTLRYKCVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSS 215 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~-~W~-~~~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 215 (371)
+++.+++|+.+ ..+.+||..+. .-. .+... .... ..++. -++++++.++.. ..
T Consensus 186 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~-~~~v-~~~~~~~~~~~l~~~~~d--------------~~ 241 (369)
T 3zwl_B 186 KGKYIIAGHKD--------GKISKYDVSNNYEYVDSIDLH-EKSI-SDMQFSPDLTYFITSSRD--------------TN 241 (369)
T ss_dssp GGCEEEEEETT--------SEEEEEETTTTTEEEEEEECC-SSCE-EEEEECTTSSEEEEEETT--------------SE
T ss_pred CCCEEEEEcCC--------CEEEEEECCCCcEeEEEEecC-CCce-eEEEECCCCCEEEEecCC--------------ce
Confidence 56666776654 46899998873 222 22111 1111 12222 256666666432 47
Q ss_pred eEEEECCCCceeec
Q 042957 216 AEVYDTQAGKWDLV 229 (371)
Q Consensus 216 v~~yd~~t~~W~~~ 229 (371)
+.+||..+.+....
T Consensus 242 i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 242 SFLVDVSTLQVLKK 255 (369)
T ss_dssp EEEEETTTCCEEEE
T ss_pred EEEEECCCCceeee
Confidence 88999988764433
No 127
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.72 E-value=0.38 Score=42.68 Aligned_cols=142 Identities=8% Similarity=0.028 Sum_probs=68.9
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE-C---CEEEEEcCCCCCCCCCCCceEEEEeCCCCc--eEeCCCCCCCce
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC-D---NKIYVAGGKSNLFSAKGTASAEVYHPELDQ--WTPLPNMSTLRY 181 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~---~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~~~ 181 (371)
..+..||..+++............-.+++.. + +.+++.|+.+ ..+.+||..+.+ -..+........
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~v~ 115 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG--------GNLHIWNLEAPEMPVYSVKGHKEIIN 115 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT--------SCEEEECTTSCSSCSEEECCCSSCEE
T ss_pred cEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC--------CeEEEEeCCCCCccEEEEEecccceE
Confidence 5677888877765433221111111112211 2 4677777765 358888887664 222221111111
Q ss_pred eeEE-----EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCCC-CCCeEEE-----ECCE
Q 042957 182 KCVG-----VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLDI-PPNQIVE-----VDNR 248 (371)
Q Consensus 182 ~~~~-----~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~-~~~~~~~-----~~~~ 248 (371)
.... ..-++++++.|+.+ ..+.+||+.+.. ...+........ ....++. .+++
T Consensus 116 ~~~~~~~~~~s~~~~~l~~~~~d--------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 181 (357)
T 3i2n_A 116 AIDGIGGLGIGEGAPEIVTGSRD--------------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER 181 (357)
T ss_dssp EEEEESGGGCC-CCCEEEEEETT--------------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC
T ss_pred EEeeccccccCCCccEEEEEeCC--------------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC
Confidence 1110 01245566666533 468889988764 233322111101 1112221 3667
Q ss_pred EEEEcCCCCCccCeEEEEeCCCCceEe
Q 042957 249 LFSSGDCLKAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 249 iyv~GG~~~~~~~~~~~yd~~~~~W~~ 275 (371)
+++.|+... .+.+||+.+..-..
T Consensus 182 ~l~~~~~d~----~i~i~d~~~~~~~~ 204 (357)
T 3i2n_A 182 VVCAGYDNG----DIKLFDLRNMALRW 204 (357)
T ss_dssp EEEEEETTS----EEEEEETTTTEEEE
T ss_pred EEEEEccCC----eEEEEECccCceee
Confidence 777776544 59999998876433
No 128
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.71 E-value=0.6 Score=41.71 Aligned_cols=136 Identities=15% Similarity=0.185 Sum_probs=65.3
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCc--eEeCCCCC--CCceee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQ--WTPLPNMS--TLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p--~~~~~~ 183 (371)
..+..+|..+.+-...-+............-+++.++.||.+ ..+.+||..+.. .+....+. ......
T Consensus 77 g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~ 148 (340)
T 1got_B 77 GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD--------NICSIYNLKTREGNVRVSRELAGHTGYLSC 148 (340)
T ss_dssp TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT--------CEEEEEETTTCSBSCEEEEEEECCSSCEEE
T ss_pred CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC--------CeEEEEECccCCCcceeEEEecCCCccEEE
Confidence 457777876654322111111111111112256777777765 367888887642 11111111 111111
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCe
Q 042957 184 VGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGH 262 (371)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~ 262 (371)
....-+++| +.|+.+ ..+.+||+.+.+-... +..-.....+++.. ++++++.|+.+. .
T Consensus 149 ~~~~~~~~l-~s~s~d--------------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~----~ 207 (340)
T 1got_B 149 CRFLDDNQI-VTSSGD--------------TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDA----S 207 (340)
T ss_dssp EEEEETTEE-EEEETT--------------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS----C
T ss_pred EEECCCCcE-EEEECC--------------CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCC----c
Confidence 112335554 444322 4688999988754322 11111111123222 566777777655 4
Q ss_pred EEEEeCCCCc
Q 042957 263 IESYDGELNM 272 (371)
Q Consensus 263 ~~~yd~~~~~ 272 (371)
+.+||+.+..
T Consensus 208 v~~wd~~~~~ 217 (340)
T 1got_B 208 AKLWDVREGM 217 (340)
T ss_dssp EEEEETTTCS
T ss_pred EEEEECCCCe
Confidence 9999998754
No 129
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.69 E-value=0.46 Score=42.04 Aligned_cols=57 Identities=12% Similarity=0.133 Sum_probs=33.4
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CC-EEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GD-SVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..++.+|+.+++....-..+.. ...+.++.. ++ .+|+.+.. ...+++||+
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~s~dg~~~~v~~~~-----------------------~~~i~~~d~ 72 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDK-----FGPGTAMMAPDNRTAYVLNNH-----------------------YGDIYGIDL 72 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSC-----CSSCEEEECTTSSEEEEEETT-----------------------TTEEEEEET
T ss_pred CeEEEEECCCCcEEEEEecCCC-----CCCceeEECCCCCEEEEEeCC-----------------------CCcEEEEeC
Confidence 4689999998875433222210 011244443 34 57777543 356899999
Q ss_pred CCCeeee
Q 042957 116 KSNEWTR 122 (371)
Q Consensus 116 ~~~~W~~ 122 (371)
.+++-..
T Consensus 73 ~t~~~~~ 79 (349)
T 1jmx_B 73 DTCKNTF 79 (349)
T ss_dssp TTTEEEE
T ss_pred CCCcEEE
Confidence 8877543
No 130
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.66 E-value=1.1 Score=40.05 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=32.0
Q ss_pred CeeEEEECCCCceeeccccccCC---CCCCeEEEE-CC-EEEEEcCCCCCccCeEEEEeC--CCCceEee
Q 042957 214 SSAEVYDTQAGKWDLVARMWQLD---IPPNQIVEV-DN-RLFSSGDCLKAWKGHIESYDG--ELNMWDEV 276 (371)
Q Consensus 214 ~~v~~yd~~t~~W~~~~~~~~~~---~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~yd~--~~~~W~~~ 276 (371)
+.+.+||+.+++++.+....... .....++.. ++ .||+..... .+.+.+|+. .+.+++.+
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~---~~~i~v~~~~~~~g~~~~~ 299 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK---ADGVAIFKVDETNGTLTKV 299 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS---SCEEEEEEECTTTCCEEEE
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC---CCEEEEEEEcCCCCcEEEe
Confidence 46888988888776554433211 111133332 44 466654320 124777766 46677776
No 131
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.63 E-value=0.22 Score=44.14 Aligned_cols=67 Identities=9% Similarity=0.128 Sum_probs=37.0
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCce-eeEEEEE-C--CEEEEEecccCCCCCCCCccccccCe
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRY-KCVGVTW-Q--GKIHVVSGFAQRADSDGSVHFTERSS 215 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~-~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~~~~ 215 (371)
+.+++.|+.+ ..+.+||..+..|+.+..+..... -..++.. + +.+++.|+.+ ..
T Consensus 71 ~~~l~s~s~D--------~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D--------------~~ 128 (316)
T 3bg1_A 71 GNILASCSYD--------RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD--------------GA 128 (316)
T ss_dssp SSCEEEEETT--------SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS--------------SC
T ss_pred CCEEEEEECC--------CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC--------------CC
Confidence 5677777765 358889988877654432221111 1122222 2 4566666543 35
Q ss_pred eEEEECCCC-ceee
Q 042957 216 AEVYDTQAG-KWDL 228 (371)
Q Consensus 216 v~~yd~~t~-~W~~ 228 (371)
+.+||..+. .|..
T Consensus 129 i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 129 ISLLTYTGEGQWEV 142 (316)
T ss_dssp EEEEEECSSSCEEE
T ss_pred EEEEecCCCCCcce
Confidence 777887765 4643
No 132
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.63 E-value=2 Score=42.72 Aligned_cols=118 Identities=16% Similarity=0.284 Sum_probs=70.9
Q ss_pred EEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCe--eeecCCCCCC--------CCCeeEEEEC
Q 042957 70 IVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNE--WTRCAPLSVP--------RYDFACTVCD 139 (371)
Q Consensus 70 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~ 139 (371)
-++.++.||+.... ..++.+|..+.+ |+.-...+.. ....+.++.+
T Consensus 73 P~v~~g~vyv~~~~------------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~ 128 (677)
T 1kb0_A 73 PVVVDGIMYVSASW------------------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK 128 (677)
T ss_dssp CEEETTEEEEECGG------------------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET
T ss_pred CEEECCEEEEECCC------------------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC
Confidence 45578999988542 458888888774 8765432211 1223456678
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCC--CCC-CceeeEEEEECCEEEEEecccCCCCCCCCccccccC
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPN--MST-LRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERS 214 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~--~p~-~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~ 214 (371)
++||+.... ..+..+|.++. .|+.-.. .+. .....+.++.+++||+..+..... ...
T Consensus 129 ~~v~v~~~d---------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~---------~~g 190 (677)
T 1kb0_A 129 GKVYVGAWD---------GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYG---------VRG 190 (677)
T ss_dssp TEEEEECTT---------SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTC---------CBC
T ss_pred CEEEEEcCC---------CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccC---------CCC
Confidence 999987332 46899999876 4775422 111 112223346788888755322111 235
Q ss_pred eeEEEECCCCc--eeec
Q 042957 215 SAEVYDTQAGK--WDLV 229 (371)
Q Consensus 215 ~v~~yd~~t~~--W~~~ 229 (371)
.+..||.++++ |+.-
T Consensus 191 ~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 191 YITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCcEEEEec
Confidence 78999998875 7654
No 133
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.62 E-value=0.66 Score=40.80 Aligned_cols=137 Identities=13% Similarity=0.016 Sum_probs=64.2
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT 187 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 187 (371)
..+..++.........................+..++.|+.+ ..+.+||.....-...........-..+..
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d--------~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--------KTIKLWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT--------SCEEEECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC--------CeEEEEEeCCCceEEEEeccccCcccceEE
Confidence 346677776665443322222212222222245556666654 246677765543222221111111111111
Q ss_pred -E--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeE
Q 042957 188 -W--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHI 263 (371)
Q Consensus 188 -~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~ 263 (371)
. .+.+++.++.. ..+.+||..+.+........ .....+++.. ++++++.|+.+. .+
T Consensus 180 ~~~~~~~~~~s~~~d--------------~~i~i~d~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~Dg----~i 239 (340)
T 4aow_A 180 SPNSSNPIIVSCGWD--------------KLVKVWNLANCKLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDG----QA 239 (340)
T ss_dssp CSCSSSCEEEEEETT--------------SCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETTC----EE
T ss_pred ccCCCCcEEEEEcCC--------------CEEEEEECCCCceeeEecCC--CCcEEEEEECCCCCEEEEEeCCC----eE
Confidence 1 23355555433 46788999887643332111 1111123322 567777777554 49
Q ss_pred EEEeCCCCc
Q 042957 264 ESYDGELNM 272 (371)
Q Consensus 264 ~~yd~~~~~ 272 (371)
.+||+.+..
T Consensus 240 ~iwd~~~~~ 248 (340)
T 4aow_A 240 MLWDLNEGK 248 (340)
T ss_dssp EEEETTTTE
T ss_pred EEEEeccCc
Confidence 999988754
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.58 E-value=0.19 Score=44.94 Aligned_cols=144 Identities=10% Similarity=0.033 Sum_probs=73.7
Q ss_pred eEEEEECCCCeeeecCCCCCCCC-CeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCC-CceeeEEE
Q 042957 109 WVLRYNVKSNEWTRCAPLSVPRY-DFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMST-LRYKCVGV 186 (371)
Q Consensus 109 ~v~~yd~~~~~W~~~~~~~~~r~-~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~~~~~~~~ 186 (371)
.+|.+|..+++++.+........ ...+..-+++||+.+... ....+.+||..+.+++.+..+.. ...-..++
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC------CCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 47888888888766432221111 122223377887775421 12568999998877766543221 11112223
Q ss_pred -EECC-EEEEEecccCCCCCCCCccccccCeeEEEECC-CCceeeccccccCCC---------CCCeEEEE-CCEEEEEc
Q 042957 187 -TWQG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQ-AGKWDLVARMWQLDI---------PPNQIVEV-DNRLFSSG 253 (371)
Q Consensus 187 -~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~~~---------~~~~~~~~-~~~iyv~G 253 (371)
.-++ .||+.+... ..+.+||+. +.+.+.+........ ..+.++.. ++++|+.+
T Consensus 93 ~spdg~~l~~~~~~~--------------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~ 158 (347)
T 3hfq_A 93 VDEARQLVYSANYHK--------------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVID 158 (347)
T ss_dssp EETTTTEEEEEETTT--------------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEEeCCC--------------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEe
Confidence 3344 466665211 467788874 334444332221110 01123332 56677765
Q ss_pred CCCCCccCeEEEEeCC-CCceEee
Q 042957 254 DCLKAWKGHIESYDGE-LNMWDEV 276 (371)
Q Consensus 254 G~~~~~~~~~~~yd~~-~~~W~~~ 276 (371)
...+ .+.+||+. +.+...+
T Consensus 159 ~~~~----~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 159 LGSD----KVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp TTTT----EEEEEEECTTSCEEEE
T ss_pred CCCC----EEEEEEECCCCcEEEe
Confidence 4332 59999988 5555544
No 135
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.55 E-value=0.24 Score=49.99 Aligned_cols=138 Identities=9% Similarity=0.032 Sum_probs=69.5
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT 187 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 187 (371)
..+..||..+.+....-.............-+++.+++|+.+ ..+.+||..+.+....-.............
T Consensus 35 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s 106 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD--------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVH 106 (814)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT--------SEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC--------CeEEEEECCCCcEEEEEecCCCCEEEEEEe
Confidence 467888887765433211111122222233366677777664 468999988876543211111111111122
Q ss_pred ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEE
Q 042957 188 WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIES 265 (371)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 265 (371)
-+++.++.|+.+ ..+.+||..++ |.....+.........++.. ++.++++|+... .+.+
T Consensus 107 ~~~~~l~~~~~d--------------g~i~vw~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg----~v~v 167 (814)
T 3mkq_A 107 PTKPYVLSGSDD--------------LTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR----TVKV 167 (814)
T ss_dssp SSSSEEEEEETT--------------SEEEEEEGGGT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS----EEEE
T ss_pred CCCCEEEEEcCC--------------CEEEEEECCCC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC----eEEE
Confidence 255555555432 46888998776 22222221111111233333 456777776554 4999
Q ss_pred EeCCCCc
Q 042957 266 YDGELNM 272 (371)
Q Consensus 266 yd~~~~~ 272 (371)
||+.+..
T Consensus 168 wd~~~~~ 174 (814)
T 3mkq_A 168 WSLGQST 174 (814)
T ss_dssp EETTCSS
T ss_pred EECCCCc
Confidence 9987643
No 136
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.53 E-value=0.008 Score=55.40 Aligned_cols=131 Identities=14% Similarity=0.119 Sum_probs=50.9
Q ss_pred ceEEEEECCCCe--eeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCCCCCCceee
Q 042957 108 AWVLRYNVKSNE--WTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~~~~ 183 (371)
..++.+|..+++ |+.-. . + .....++.++++|+.+..+ ..++.+|.++. .|+.-...+......
T Consensus 19 g~v~a~d~~tG~~~W~~~~--~-~-~~s~p~~~~g~~~v~~s~d--------g~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKE--D-P-VLQVPTHVEEPAFLPDPND--------GSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC--C-C-SCCCC-----CCEEECTTT--------CCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred CEEEEEECCCCCEEEEecC--C-C-ceecceEcCCCEEEEeCCC--------CEEEEEECCCCceeeeeeccCccccccC
Confidence 358888887764 76533 1 1 1122334567788876543 35888998654 465422211111111
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCCCCCCeEEEECCEEEEEcCCCCCccC
Q 042957 184 VGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKG 261 (371)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~ 261 (371)
.+...++.||+ |+. ...+.++|+++++ |+.-.... . ..+-.++.||+ |+.. .
T Consensus 87 p~~~~~~~v~~-g~~--------------dg~v~a~D~~tG~~~w~~~~~~~--~----~~~p~~~~v~~-~~~d----g 140 (369)
T 2hz6_A 87 PCRSSDGILYM-GKK--------------QDIWYVIDLLTGEKQQTLSSAFA--D----SLSPSTSLLYL-GRTE----Y 140 (369)
T ss_dssp SCC-----CCC-CEE--------------EEEEEEECCC----------------------------EEE-EEEE----E
T ss_pred ceEecCCEEEE-EeC--------------CCEEEEEECCCCcEEEEecCCCc--c----cccccCCEEEE-EecC----C
Confidence 11124555553 321 1468889988764 54332111 0 11113445554 3322 2
Q ss_pred eEEEEeCCCCc--eEee
Q 042957 262 HIESYDGELNM--WDEV 276 (371)
Q Consensus 262 ~~~~yd~~~~~--W~~~ 276 (371)
.+..+|+.+.+ |+.-
T Consensus 141 ~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 141 TITMYDTKTRELRWNAT 157 (369)
T ss_dssp EEECCCSSSSSCCCEEE
T ss_pred EEEEEECCCCCEEEeEe
Confidence 48889987654 7753
No 137
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.50 E-value=0.18 Score=44.94 Aligned_cols=103 Identities=7% Similarity=0.032 Sum_probs=55.6
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCc--eEeCCCCCC--CceeeEEE-----EECCEEEEEecccCCCCCCCCcc
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQ--WTPLPNMST--LRYKCVGV-----TWQGKIHVVSGFAQRADSDGSVH 209 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~--~~~~~~~~-----~~~~~lyv~GG~~~~~~~~~~~~ 209 (371)
++..++.|+.+ ..+.+||..+.. ...+..... .+.-..++ ..++++++.|+..
T Consensus 128 ~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---------- 189 (357)
T 3i2n_A 128 GAPEIVTGSRD--------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN---------- 189 (357)
T ss_dssp CCCEEEEEETT--------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT----------
T ss_pred CccEEEEEeCC--------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC----------
Confidence 56667777765 358889988764 333322221 11111222 1366677777533
Q ss_pred ccccCeeEEEECCCCceeeccccccCCCCCCeEEEE----CCEEEEEcCCCCCccCeEEEEeCCC
Q 042957 210 FTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV----DNRLFSSGDCLKAWKGHIESYDGEL 270 (371)
Q Consensus 210 ~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~yd~~~ 270 (371)
..+.+||+++.+-........ ....++.. ++..++.|+..+ .+.+||+.+
T Consensus 190 ----~~i~i~d~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~ 243 (357)
T 3i2n_A 190 ----GDIKLFDLRNMALRWETNIKN---GVCSLEFDRKDISMNKLVATSLEG----KFHVFDMRT 243 (357)
T ss_dssp ----SEEEEEETTTTEEEEEEECSS---CEEEEEESCSSSSCCEEEEEESTT----EEEEEEEEE
T ss_pred ----CeEEEEECccCceeeecCCCC---ceEEEEcCCCCCCCCEEEEECCCC----eEEEEeCcC
Confidence 478899998876433322111 11234433 466677766544 488888765
No 138
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.45 E-value=0.21 Score=45.85 Aligned_cols=135 Identities=9% Similarity=0.048 Sum_probs=66.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~ 186 (371)
..+..+|..+.+-...-.-.. ..-.+++. -++..++.|+.+ ..+.+||..+.+....-..... ...++
T Consensus 145 ~~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d--------~~v~iwd~~~~~~~~~~~~~~~--v~~~~ 213 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQGHE-QDIYSLDYFPSGDKLVSGSGD--------RTVRIWDLRTGQCSLTLSIEDG--VTTVA 213 (393)
T ss_dssp SCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETT--------SEEEEEETTTTEEEEEEECSSC--EEEEE
T ss_pred CeEEEEECCCCcEEEEEccCC-CCEEEEEEcCCCCEEEEecCC--------CcEEEEECCCCeeEEEEEcCCC--cEEEE
Confidence 467888887776433211111 11112222 245566666664 4688899988765432221111 11222
Q ss_pred EE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecccccc----CCCC-CCeEEEE-CCEEEEEcCCCCC
Q 042957 187 TW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQ----LDIP-PNQIVEV-DNRLFSSGDCLKA 258 (371)
Q Consensus 187 ~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~----~~~~-~~~~~~~-~~~iyv~GG~~~~ 258 (371)
.. ++++++.|+.+ ..+.+||+.+..-........ .... ..+++.. ++++++.|+.+.
T Consensus 214 ~~~~~~~~l~~~s~d--------------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~- 278 (393)
T 1erj_A 214 VSPGDGKYIAAGSLD--------------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR- 278 (393)
T ss_dssp ECSTTCCEEEEEETT--------------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred EECCCCCEEEEEcCC--------------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC-
Confidence 22 56777777643 468889998775432211110 0000 1122222 566777776554
Q ss_pred ccCeEEEEeCCCC
Q 042957 259 WKGHIESYDGELN 271 (371)
Q Consensus 259 ~~~~~~~yd~~~~ 271 (371)
.+.+||+.+.
T Consensus 279 ---~v~~wd~~~~ 288 (393)
T 1erj_A 279 ---SVKLWNLQNA 288 (393)
T ss_dssp ---EEEEEEC---
T ss_pred ---EEEEEECCCC
Confidence 4889988753
No 139
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.40 E-value=1.6 Score=40.12 Aligned_cols=183 Identities=11% Similarity=0.057 Sum_probs=89.1
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
+.|+.||..+++..++-.+.. |...-.+++.. ++..++.|+.+ ..+..+|..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~----~~~~V~sv~fspdg~~lasgs~D-----------------------g~v~iWd~~ 177 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQ----PGEYISSVAWIKEGNYLAVGTSS-----------------------AEVQLWDVQ 177 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCS----TTCCEEEEEECTTSSEEEEEETT-----------------------SCEEEEETT
T ss_pred CEEEEEECCCCCEEEEEEecC----CCCcEEEEEECCCCCEEEEEECC-----------------------CeEEEEEcC
Confidence 458899999887665433321 11112234433 46677777663 457888888
Q ss_pred CCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe--CCCCCCCceeeEEEEECCEEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP--LPNMSTLRYKCVGVTWQGKIHV 194 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~--~~~~p~~~~~~~~~~~~~~lyv 194 (371)
+.+-...-. .......+...++.+++.|+.+ ..+..+|........ +..-..... ......+++.++
T Consensus 178 ~~~~~~~~~--~h~~~v~~~s~~~~~l~sgs~d--------~~i~~~d~~~~~~~~~~~~~h~~~~~-~~~~~~~g~~l~ 246 (420)
T 4gga_A 178 QQKRLRNMT--SHSARVGSLSWNSYILSSGSRS--------GHIHHHDVRVAEHHVATLSGHSQEVC-GLRWAPDGRHLA 246 (420)
T ss_dssp TTEEEEEEC--CCSSCEEEEEEETTEEEEEETT--------SEEEEEETTSSSCEEEEEECCSSCEE-EEEECTTSSEEE
T ss_pred CCcEEEEEe--CCCCceEEEeeCCCEEEEEeCC--------CceeEeeecccceeeEEeccccccee-eeeecCCCCeee
Confidence 776433211 1122233444567777777765 357777766543221 111111111 111122455555
Q ss_pred EecccCCCCCCCCccccccCeeEEEECCCCce--eeccccccCCCCCCeEEEE--CCEEEEE-cCCCCCccCeEEEEeCC
Q 042957 195 VSGFAQRADSDGSVHFTERSSAEVYDTQAGKW--DLVARMWQLDIPPNQIVEV--DNRLFSS-GDCLKAWKGHIESYDGE 269 (371)
Q Consensus 195 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W--~~~~~~~~~~~~~~~~~~~--~~~iyv~-GG~~~~~~~~~~~yd~~ 269 (371)
.++.+ +.+.++|..+..- ..+............++.. +..+++. +|... ..|.+||+.
T Consensus 247 s~~~D--------------~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D---~~I~iwd~~ 309 (420)
T 4gga_A 247 SGGND--------------NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD---RHIRIWNVC 309 (420)
T ss_dssp EEETT--------------SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT---CEEEEEETT
T ss_pred eeecc--------------ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC---CEEEEEeCC
Confidence 55433 4567777765531 1121111111111112222 3445544 34332 259999998
Q ss_pred CCceEe
Q 042957 270 LNMWDE 275 (371)
Q Consensus 270 ~~~W~~ 275 (371)
+..-..
T Consensus 310 t~~~~~ 315 (420)
T 4gga_A 310 SGACLS 315 (420)
T ss_dssp TTEEEE
T ss_pred ccccce
Confidence 865443
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.40 E-value=0.29 Score=41.89 Aligned_cols=190 Identities=6% Similarity=-0.142 Sum_probs=94.9
Q ss_pred cceeEEeCCC-CceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSN-NTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~-~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..++.||..+ .+...+..... ...-..++.. +++.+++++... .....+|.++.
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~-------------------~~~~~l~~~~~ 117 (297)
T 2ojh_A 62 GLLYRLSLAGDPSPEKVDTGFA-----TICNNDHGISPDGALYAISDKVE-------------------FGKSAIYLLPS 117 (297)
T ss_dssp TEEEEEESSSCCSCEECCCTTC-----CCBCSCCEECTTSSEEEEEECTT-------------------TSSCEEEEEET
T ss_pred CeEEEEeCCCCCCceEeccccc-----cccccceEECCCCCEEEEEEeCC-------------------CCcceEEEEEC
Confidence 3588999988 77665543221 0111123333 555555544320 12567899998
Q ss_pred CCCeeeecCCCCCCCCCeeEEEE-CC-EEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCE-E
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVC-DN-KIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGK-I 192 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~-l 192 (371)
.+.+-..+..... ...++.. ++ .|++.++.+. ...++.++..+.....+...+..... ....-+++ |
T Consensus 118 ~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~s~dg~~l 187 (297)
T 2ojh_A 118 TGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ------VFDIYSMDIDSGVETRLTHGEGRNDG-PDYSPDGRWI 187 (297)
T ss_dssp TCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT------EEEEEEEETTTCCEEECCCSSSCEEE-EEECTTSSEE
T ss_pred CCCceEEeecCCC---ccceEECCCCCEEEEEECCCC------ceEEEEEECCCCcceEcccCCCcccc-ceECCCCCEE
Confidence 8777555543221 1222222 44 4554554431 23677777877777666543322221 11223554 4
Q ss_pred EEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCC-------ccCeEE
Q 042957 193 HVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKA-------WKGHIE 264 (371)
Q Consensus 193 yv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~-------~~~~~~ 264 (371)
++.+.... ...++.+++.......+..... ....++. -+++.+++++.... ....++
T Consensus 188 ~~~~~~~~------------~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 188 YFNSSRTG------------QMQIWRVRVDGSSVERITDSAY---GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp EEEECTTS------------SCEEEEEETTSSCEEECCCCSE---EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred EEEecCCC------------CccEEEECCCCCCcEEEecCCc---ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 44443222 1467778877766655543221 1111222 24554444433211 124699
Q ss_pred EEeCCCCceEee
Q 042957 265 SYDGELNMWDEV 276 (371)
Q Consensus 265 ~yd~~~~~W~~~ 276 (371)
++|+++.+...+
T Consensus 253 ~~d~~~~~~~~~ 264 (297)
T 2ojh_A 253 LMDMDGGNVETL 264 (297)
T ss_dssp EEETTSCSCEEE
T ss_pred EEecCCCCceee
Confidence 999998877666
No 141
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.37 E-value=0.77 Score=39.76 Aligned_cols=132 Identities=11% Similarity=0.113 Sum_probs=59.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCc-eEeCCCCCCCceeeEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQ-WTPLPNMSTLRYKCVGV 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~~~~~~~~ 186 (371)
..+..||..+.+-...-.............-++++++.|+.++ .+.+|+..... .+.+..+.........+
T Consensus 39 g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 110 (313)
T 3odt_A 39 GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT--------MINGVPLFATSGEDPLYTLIGHQGNVCSL 110 (313)
T ss_dssp SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS--------CEEEEETTCCTTSCC-CEECCCSSCEEEE
T ss_pred CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC--------eEEEEEeeecCCCCcccchhhcccCEEEE
Confidence 4677888766653332211111122222233667777777652 46677765432 12122222111112222
Q ss_pred EECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEE
Q 042957 187 TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 187 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 264 (371)
..++.+++.|+.+ ..+..||....... +.........+... ++..++.++... .+.
T Consensus 111 ~~~~~~l~~~~~d--------------~~i~~~d~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~i~ 168 (313)
T 3odt_A 111 SFQDGVVISGSWD--------------KTAKVWKEGSLVYN----LQAHNASVWDAKVVSFSENKFLTASADK----TIK 168 (313)
T ss_dssp EEETTEEEEEETT--------------SEEEEEETTEEEEE----EECCSSCEEEEEEEETTTTEEEEEETTS----CEE
T ss_pred EecCCEEEEEeCC--------------CCEEEEcCCcEEEe----cccCCCceeEEEEccCCCCEEEEEECCC----CEE
Confidence 3355566666533 46778882222111 11111111122222 566677766544 488
Q ss_pred EEeCC
Q 042957 265 SYDGE 269 (371)
Q Consensus 265 ~yd~~ 269 (371)
+||..
T Consensus 169 i~d~~ 173 (313)
T 3odt_A 169 LWQND 173 (313)
T ss_dssp EEETT
T ss_pred EEecC
Confidence 99843
No 142
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.34 E-value=1.4 Score=39.78 Aligned_cols=138 Identities=6% Similarity=-0.013 Sum_probs=66.3
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe-CCCCCCCceeeE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP-LPNMSTLRYKCV 184 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~~~~~~ 184 (371)
..+..+|..+.+-...-....+......... ++.+++.|+.+ ..+.+||..+.+-.. +...... -..
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~d~~~~~~~~~~~~~~~~--v~~ 191 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG--------PKVQLCDLKSGSCSHILQGHRQE--ILA 191 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS--------SSEEEEESSSSCCCEEECCCCSC--EEE
T ss_pred CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC--------CeEEEEeCCCcceeeeecCCCCc--EEE
Confidence 5678888887765443322222111111111 34467777664 358889987654221 1111111 112
Q ss_pred EEEE-CCE-EEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccc--------cc---cCCCC-CCeEEEE-CC
Q 042957 185 GVTW-QGK-IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVAR--------MW---QLDIP-PNQIVEV-DN 247 (371)
Q Consensus 185 ~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~--------~~---~~~~~-~~~~~~~-~~ 247 (371)
++.. +++ +++.|+.+ ..+.+||+.+.. ...+.. .. ..... ...++.. ++
T Consensus 192 ~~~~~~~~~ll~~~~~d--------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 257 (408)
T 4a11_B 192 VSWSPRYDYILATASAD--------------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG 257 (408)
T ss_dssp EEECSSCTTEEEEEETT--------------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS
T ss_pred EEECCCCCcEEEEEcCC--------------CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC
Confidence 2222 333 67777543 467888887653 111110 00 01111 1122222 55
Q ss_pred EEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 248 RLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 248 ~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
+.++.|+.++ .+.+||+.+..-
T Consensus 258 ~~l~~~~~dg----~i~vwd~~~~~~ 279 (408)
T 4a11_B 258 LHLLTVGTDN----RMRLWNSSNGEN 279 (408)
T ss_dssp SEEEEEETTS----CEEEEETTTCCB
T ss_pred CEEEEecCCC----eEEEEECCCCcc
Confidence 6666666544 499999987653
No 143
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.29 E-value=1.4 Score=38.74 Aligned_cols=182 Identities=9% Similarity=-0.024 Sum_probs=93.4
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+++||+.... ......+. .-++++.. ++++|+..... ....+++||+.
T Consensus 53 ~~I~~~d~~g~~-~~~~~~~~-------~p~gia~~~dG~l~vad~~~---------------------~~~~v~~~d~~ 103 (306)
T 2p4o_A 53 GEIVSITPDGNQ-QIHATVEG-------KVSGLAFTSNGDLVATGWNA---------------------DSIPVVSLVKS 103 (306)
T ss_dssp TEEEEECTTCCE-EEEEECSS-------EEEEEEECTTSCEEEEEECT---------------------TSCEEEEEECT
T ss_pred CeEEEECCCCce-EEEEeCCC-------CceeEEEcCCCcEEEEeccC---------------------CcceEEEEcCC
Confidence 457888877542 22222221 12345554 56788864221 11358889988
Q ss_pred CCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCc---eEeCCC----CC-CCc-eeeEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQ---WTPLPN----MS-TLR-YKCVGV 186 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~---W~~~~~----~p-~~~-~~~~~~ 186 (371)
+.+.+.+...+..+.....+. .++.+|+.--. ...++++|+.+.+ |...+. .+ ... ....+.
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~--------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis 175 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSY--------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLK 175 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEETT--------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEE
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEECC--------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcC
Confidence 888776655444443333333 35567775321 2478999987642 211110 11 111 111223
Q ss_pred EECCEEEEEecccCCCCCCCCccccccCeeEEEECCC-CceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEE
Q 042957 187 TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQA-GKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 187 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t-~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 264 (371)
.-++.||+.-- ..+.+.+||+.. .+........... ....+++. +++||+..... +.|.
T Consensus 176 ~dg~~lyv~d~--------------~~~~I~~~~~~~~g~~~~~~~~~~~~-~P~gi~vd~dG~l~va~~~~----~~V~ 236 (306)
T 2p4o_A 176 RFGNFLYVSNT--------------EKMLLLRIPVDSTDKPGEPEIFVEQT-NIDDFAFDVEGNLYGATHIY----NSVV 236 (306)
T ss_dssp EETTEEEEEET--------------TTTEEEEEEBCTTSCBCCCEEEEESC-CCSSEEEBTTCCEEEECBTT----CCEE
T ss_pred cCCCEEEEEeC--------------CCCEEEEEEeCCCCCCCccEEEeccC-CCCCeEECCCCCEEEEeCCC----CeEE
Confidence 34567998763 225789999875 3221111111111 22345544 67888875432 3599
Q ss_pred EEeCCCCceEee
Q 042957 265 SYDGELNMWDEV 276 (371)
Q Consensus 265 ~yd~~~~~W~~~ 276 (371)
+||++ .+...+
T Consensus 237 ~~~~~-G~~~~~ 247 (306)
T 2p4o_A 237 RIAPD-RSTTII 247 (306)
T ss_dssp EECTT-CCEEEE
T ss_pred EECCC-CCEEEE
Confidence 99987 444433
No 144
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.29 E-value=1.1 Score=39.80 Aligned_cols=131 Identities=8% Similarity=0.004 Sum_probs=65.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEE---EECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACT---VCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCV 184 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~---~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~ 184 (371)
..+..+|..+.+.........+ -.++. ..++.+++.|+.+ ..+.+||..+.+-... +........
T Consensus 108 g~v~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~~~~~--~~~~~~~~~ 175 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHDAP--VKTIHWIKAPNYSCVMTGSWD--------KTLKFWDTRSSNPMMV--LQLPERCYC 175 (368)
T ss_dssp SEEEEEETTTTEEEEEEECSSC--EEEEEEEECSSCEEEEEEETT--------SEEEEECSSCSSCSEE--EECSSCEEE
T ss_pred CcEEEEEcCCCCceeeccccCc--eEEEEEEeCCCCCEEEEccCC--------CcEEEEECCCCcEEEE--EecCCCceE
Confidence 5688889888876553321111 11222 2366778887765 3688999877642211 111122223
Q ss_pred EEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCCCCCCeEEEE-CC----EEEEEcCCCC
Q 042957 185 GVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLDIPPNQIVEV-DN----RLFSSGDCLK 257 (371)
Q Consensus 185 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~-~~----~iyv~GG~~~ 257 (371)
.......+++.+. ...+..||..... +..+....... ...+... +. ..++.|+...
T Consensus 176 ~~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dg 238 (368)
T 3mmy_A 176 ADVIYPMAVVATA---------------ERGLIVYQLENQPSEFRRIESPLKHQ--HRCVAIFKDKQNKPTGFALGSIEG 238 (368)
T ss_dssp EEEETTEEEEEEG---------------GGCEEEEECSSSCEEEEECCCSCSSC--EEEEEEEECTTSCEEEEEEEETTS
T ss_pred EEecCCeeEEEeC---------------CCcEEEEEeccccchhhhccccccCC--CceEEEcccCCCCCCeEEEecCCC
Confidence 3345565555442 2467888887653 22222111110 1112221 21 2355555444
Q ss_pred CccCeEEEEeCCCC
Q 042957 258 AWKGHIESYDGELN 271 (371)
Q Consensus 258 ~~~~~~~~yd~~~~ 271 (371)
.+.+||....
T Consensus 239 ----~i~i~~~~~~ 248 (368)
T 3mmy_A 239 ----RVAIHYINPP 248 (368)
T ss_dssp ----EEEEEESSCS
T ss_pred ----cEEEEecCCC
Confidence 4888888775
No 145
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.29 E-value=1.3 Score=38.40 Aligned_cols=185 Identities=10% Similarity=-0.047 Sum_probs=95.6
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+++||+.++ ...+.... ..-.+++.. ++++|+.... ...+++||+.
T Consensus 50 ~~i~~~~~~~~-~~~~~~~~-------~~~~~l~~~~dg~l~v~~~~-----------------------~~~i~~~d~~ 98 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHPS-------HHQNGHCLNKQGHLIACSHG-----------------------LRRLERQREP 98 (296)
T ss_dssp TEEEEEETTSC-EEEEESSC-------SSEEEEEECTTCCEEEEETT-----------------------TTEEEEECST
T ss_pred CEEEEEECCCC-eEEEECCC-------CCcceeeECCCCcEEEEecC-----------------------CCeEEEEcCC
Confidence 45889999887 55543221 112245543 5778876432 2568999998
Q ss_pred CCeeeecCCCCC----CCCCeeEEEECCEEEEE----cCCCCC-----CCCCCCceEEEEeCCCCceEeCCCCCCCceee
Q 042957 117 SNEWTRCAPLSV----PRYDFACTVCDNKIYVA----GGKSNL-----FSAKGTASAEVYHPELDQWTPLPNMSTLRYKC 183 (371)
Q Consensus 117 ~~~W~~~~~~~~----~r~~~~~~~~~~~lyv~----GG~~~~-----~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~ 183 (371)
+++.+.+..... .+....++.-++++|+. |..... ........++.+|+. .+.+.+..- .....
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~ 175 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--RVKPN 175 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--CSSEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--CCCCc
Confidence 888766532211 11122223336788886 331100 011123578999887 555443221 11111
Q ss_pred EEEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECC-CCce-eeccccccCCCCCCeEEE-ECCEEEEEcCCCCCc
Q 042957 184 VGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQ-AGKW-DLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAW 259 (371)
Q Consensus 184 ~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~-t~~W-~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~ 259 (371)
.++. -++++++.... ...+++||+. +++. .....+........+++. -+++||+.. .
T Consensus 176 gi~~s~dg~~lv~~~~--------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~--- 236 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTG--------------DNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--G--- 236 (296)
T ss_dssp EEEECTTSCEEEEETT--------------TTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--T---
T ss_pred cEEECCCCCEEEEeCC--------------CCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--C---
Confidence 2222 35666544421 2478889886 4554 211111101111224444 367888876 2
Q ss_pred cCeEEEEeCCCCceEee
Q 042957 260 KGHIESYDGELNMWDEV 276 (371)
Q Consensus 260 ~~~~~~yd~~~~~W~~~ 276 (371)
+.+.+||++......+
T Consensus 237 -~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 237 -DGVHVLTPDGDELGRV 252 (296)
T ss_dssp -TEEEEECTTSCEEEEE
T ss_pred -CeEEEECCCCCEEEEE
Confidence 3599999986655555
No 146
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.27 E-value=0.95 Score=39.85 Aligned_cols=134 Identities=7% Similarity=-0.088 Sum_probs=65.0
Q ss_pred ceEEEEEC-CCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCc-------eEeCCCCCCC
Q 042957 108 AWVLRYNV-KSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQ-------WTPLPNMSTL 179 (371)
Q Consensus 108 ~~v~~yd~-~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-------W~~~~~~p~~ 179 (371)
..+..||. .+.+...+........-.+++...+.+++.|+.+ ..+.+||..+.. .+.+..+...
T Consensus 79 g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD--------GLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT--------SEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC--------CeEEEEcccccccccccccCCeeeEEeeC
Confidence 46888888 7776655543111111112222225556666654 367888876400 2223333322
Q ss_pred ceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCC-Cce--eeccccccCCCCCCeEEEE--CCEEEEEcC
Q 042957 180 RYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQA-GKW--DLVARMWQLDIPPNQIVEV--DNRLFSSGD 254 (371)
Q Consensus 180 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t-~~W--~~~~~~~~~~~~~~~~~~~--~~~iyv~GG 254 (371)
..-..++...+. ++.|+.. ..+.+||+.+ ..- ..... ... .....++.. ++++++.|+
T Consensus 151 ~~v~~~~~~~~~-l~~~~~d--------------~~i~i~d~~~~~~~~~~~~~~-~~~-~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVGMNN--------------SQVQWFRLPLCEDDNGTIEES-GLK-YQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp CCEEEEEECSSE-EEEEEST--------------TEEEEEESSCCTTCCCEEEEC-SCS-SCEEEEEECSGGGCEEEEEE
T ss_pred CceEEEEecCCc-EEEEeCC--------------CeEEEEECCccccccceeeec-CCC-CceeEEEECCCCCCEEEEEe
Confidence 222333444555 4444322 4788999987 432 22211 111 111233333 467777776
Q ss_pred CCCCccCeEEEEeCCC
Q 042957 255 CLKAWKGHIESYDGEL 270 (371)
Q Consensus 255 ~~~~~~~~~~~yd~~~ 270 (371)
... .+.+||...
T Consensus 214 ~dg----~i~i~~~~~ 225 (342)
T 1yfq_A 214 IDG----RVAVEFFDD 225 (342)
T ss_dssp TTS----EEEEEECCT
T ss_pred cCC----cEEEEEEcC
Confidence 544 377766654
No 147
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.19 E-value=0.47 Score=45.82 Aligned_cols=107 Identities=10% Similarity=0.025 Sum_probs=56.3
Q ss_pred EEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCc--eeeEEEE-EC-CEEEEEecccCCCCCCCCccccccCeeE
Q 042957 142 IYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLR--YKCVGVT-WQ-GKIHVVSGFAQRADSDGSVHFTERSSAE 217 (371)
Q Consensus 142 lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~--~~~~~~~-~~-~~lyv~GG~~~~~~~~~~~~~~~~~~v~ 217 (371)
+++.|+.+ ..+.+||..+.+-...-...... .-..++. -+ +++++.|+.. ..+.
T Consensus 175 ~l~~~~~d--------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------------g~i~ 232 (615)
T 1pgu_A 175 RSMTVGDD--------GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD--------------RKIS 232 (615)
T ss_dssp EEEEEETT--------TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT--------------CCEE
T ss_pred EEEEEeCC--------CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC--------------CeEE
Confidence 66676654 46888887765432211111110 1122222 24 6666666543 4688
Q ss_pred EEECCCCceeecc-cc--ccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEe
Q 042957 218 VYDTQAGKWDLVA-RM--WQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 218 ~yd~~t~~W~~~~-~~--~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~ 275 (371)
+||+.+.+....- .. ... .....++..+++.++.++..+ .+.+||+.+.+-..
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQ-GGIFALSWLDSQKFATVGADA----TIRVWDVTTSKCVQ 288 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCC-SCEEEEEESSSSEEEEEETTS----EEEEEETTTTEEEE
T ss_pred EEECCCCCEeEEecccccccC-CceEEEEEcCCCEEEEEcCCC----cEEEEECCCCcEEE
Confidence 9999877643322 10 111 111123322677777776544 49999998765443
No 148
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.11 E-value=0.72 Score=41.67 Aligned_cols=179 Identities=8% Similarity=-0.065 Sum_probs=91.6
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEEC--CEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLG--DSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..+..||..+.+........ .|...-.+++... +.+++.|+.+ ..+..+|.
T Consensus 96 g~i~iwd~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~l~s~~~d-----------------------~~i~iwd~ 148 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGM----GPGDAITGMKFNQFNTNQLFVSSIR-----------------------GATTLRDF 148 (383)
T ss_dssp SCEEEEETTSTTCEEEECCC----STTCBEEEEEEETTEEEEEEEEETT-----------------------TEEEEEET
T ss_pred CeEEEEeCCCcccceeeecC----CcCCceeEEEeCCCCCCEEEEEeCC-----------------------CEEEEEEC
Confidence 34888998877765543321 1222233455443 3566666553 56788888
Q ss_pred CCCeeeecCCCCCCCC--CeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-CCE-
Q 042957 116 KSNEWTRCAPLSVPRY--DFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-QGK- 191 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~--~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~- 191 (371)
.......+........ ......-+++.++.|+.+ ..+.+||.....-..+..-.... ..++.. +++
T Consensus 149 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~h~~~v--~~~~~~~~~~~ 218 (383)
T 3ei3_B 149 SGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST--------GRLLLLGLDGHEIFKEKLHKAKV--THAEFNPRCDW 218 (383)
T ss_dssp TSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT--------SEEEEEETTSCEEEEEECSSSCE--EEEEECSSCTT
T ss_pred CCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC--------CCEEEEECCCCEEEEeccCCCcE--EEEEECCCCCC
Confidence 8766655543321111 122222356677777764 46889998544333332211111 122222 344
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEe
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYD 267 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd 267 (371)
+++.|+.+ ..+.+||+.+.. -..+..+.... ....++.. ++++++.++.++ .+.+||
T Consensus 219 ~l~s~~~d--------------~~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~l~~~~~d~----~i~iwd 279 (383)
T 3ei3_B 219 LMATSSVD--------------ATVKLWDLRNIKDKNSYIAEMPHEK-PVNAAYFNPTDSTKLLTTDQRN----EIRVYS 279 (383)
T ss_dssp EEEEEETT--------------SEEEEEEGGGCCSTTCEEEEEECSS-CEEEEEECTTTSCEEEEEESSS----EEEEEE
T ss_pred EEEEEeCC--------------CEEEEEeCCCCCcccceEEEecCCC-ceEEEEEcCCCCCEEEEEcCCC----cEEEEE
Confidence 66666543 478889988732 11111111111 11123332 456777766544 599999
Q ss_pred CCCCc
Q 042957 268 GELNM 272 (371)
Q Consensus 268 ~~~~~ 272 (371)
+.+..
T Consensus 280 ~~~~~ 284 (383)
T 3ei3_B 280 SYDWS 284 (383)
T ss_dssp TTBTT
T ss_pred CCCCc
Confidence 87643
No 149
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.03 E-value=2.9 Score=40.94 Aligned_cols=120 Identities=13% Similarity=0.186 Sum_probs=67.7
Q ss_pred EEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC-CCC--eeeecCCCCC-----CC---CCeeEEE
Q 042957 69 SIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV-KSN--EWTRCAPLSV-----PR---YDFACTV 137 (371)
Q Consensus 69 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~-~~~--~W~~~~~~~~-----~r---~~~~~~~ 137 (371)
+-++.++.||+.... ...++.+|. .+. .|+.-..... .+ ...+.++
T Consensus 57 tP~v~~g~vyv~~~~-----------------------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av 113 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-----------------------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAY 113 (599)
T ss_dssp CCEEETTEEEEECST-----------------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEE
T ss_pred ccEEECCEEEEEeCC-----------------------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEE
Confidence 345569999998652 135788888 666 3876443321 11 1223445
Q ss_pred --ECCE----EEEEcCCCCCCCCCCCceEEEEeCCCCc--eEeCC-CCCCC-ceeeEEEEECCEEEEEecccCCCCCCCC
Q 042957 138 --CDNK----IYVAGGKSNLFSAKGTASAEVYHPELDQ--WTPLP-NMSTL-RYKCVGVTWQGKIHVVSGFAQRADSDGS 207 (371)
Q Consensus 138 --~~~~----lyv~GG~~~~~~~~~~~~~~~yd~~t~~--W~~~~-~~p~~-~~~~~~~~~~~~lyv~GG~~~~~~~~~~ 207 (371)
.+++ ||+.... ..+..+|.++.+ |+.-. ..... ....+-++.+++||+-.+.....
T Consensus 114 ~p~~g~~~~rV~v~t~d---------g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g----- 179 (599)
T 1w6s_A 114 WPGDGKTPALILKTQLD---------GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELG----- 179 (599)
T ss_dssp ECCCSSSCCEEEEECTT---------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGT-----
T ss_pred EecCCcceeEEEEEcCC---------CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccC-----
Confidence 5666 8875321 468999988764 87532 21111 11122345788887644211111
Q ss_pred ccccccCeeEEEECCCCc--eeec
Q 042957 208 VHFTERSSAEVYDTQAGK--WDLV 229 (371)
Q Consensus 208 ~~~~~~~~v~~yd~~t~~--W~~~ 229 (371)
....+..||.++.+ |+.-
T Consensus 180 ----~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 180 ----VRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ----CCCEEEEEETTTCCEEEEEE
T ss_pred ----CCCeEEEEECCCCcEEEEEc
Confidence 12578999999775 7644
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.01 E-value=0.28 Score=43.46 Aligned_cols=150 Identities=15% Similarity=0.025 Sum_probs=71.3
Q ss_pred cceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECC-EEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCC-----C
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDN-KIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMST-----L 179 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-----~ 179 (371)
...++++|+.+++....-..+....-..++. -++ .+|+.+..+ ..+.+||+.+.+-...-.++. .
T Consensus 20 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~--------~~i~~~d~~t~~~~~~~~~~~~~~~~~ 91 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY--------GDIYGIDLDTCKNTFHANLSSVPGEVG 91 (349)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT--------TEEEEEETTTTEEEEEEESCCSTTEEE
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC--------CcEEEEeCCCCcEEEEEEccccccccc
Confidence 3578999998887543322222101222333 244 577775432 469999998876543222221 1
Q ss_pred ceeeEEEE-ECC-EEEEEecccCCCCCCCCccccccCeeEEEECCCCceeec-cccccCCCCCCeEEE-ECCEEEEEcCC
Q 042957 180 RYKCVGVT-WQG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLV-ARMWQLDIPPNQIVE-VDNRLFSSGDC 255 (371)
Q Consensus 180 ~~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~ 255 (371)
..-..++. -++ .||+.+......... .......+.+||+++++-... .....+.. ..+++. -++++|+.++
T Consensus 92 ~~~~~~~~spdg~~l~~~~~~~~~~~~~---~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~l~~~~~- 166 (349)
T 1jmx_B 92 RSMYSFAISPDGKEVYATVNPTQRLNDH---YVVKPPRLEVFSTADGLEAKPVRTFPMPRQ-VYLMRAADDGSLYVAGP- 166 (349)
T ss_dssp ECSSCEEECTTSSEEEEEEEEEEECSSC---EEECCCEEEEEEGGGGGGBCCSEEEECCSS-CCCEEECTTSCEEEESS-
T ss_pred ccccceEECCCCCEEEEEcccccccccc---cccCCCeEEEEECCCccccceeeeccCCCc-ccceeECCCCcEEEccC-
Confidence 11112222 244 455554210000000 000025789999987543221 11122221 223333 3566777532
Q ss_pred CCCccCeEEEEeCCCCceEe
Q 042957 256 LKAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 256 ~~~~~~~~~~yd~~~~~W~~ 275 (371)
++.++|+.+.+-..
T Consensus 167 ------~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 167 ------DIYKMDVKTGKYTV 180 (349)
T ss_dssp ------SEEEECTTTCCEEE
T ss_pred ------cEEEEeCCCCceec
Confidence 39999998766443
No 151
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.98 E-value=0.87 Score=41.11 Aligned_cols=51 Identities=14% Similarity=0.135 Sum_probs=25.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCe-eEEEE-CC-EEEEEcCCCCCCCCCCCceEEEEeCCCC
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDF-ACTVC-DN-KIYVAGGKSNLFSAKGTASAEVYHPELD 168 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~-~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 168 (371)
..+..||..+.+-... +....... +++.. ++ .+++.|+.+ ..+.+||..+.
T Consensus 166 ~~v~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~ll~~~~~d--------g~i~i~d~~~~ 219 (408)
T 4a11_B 166 PKVQLCDLKSGSCSHI--LQGHRQEILAVSWSPRYDYILATASAD--------SRVKLWDVRRA 219 (408)
T ss_dssp SSEEEEESSSSCCCEE--ECCCCSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTCS
T ss_pred CeEEEEeCCCcceeee--ecCCCCcEEEEEECCCCCcEEEEEcCC--------CcEEEEECCCC
Confidence 4578888876542211 11111111 22222 33 377777765 35788888654
No 152
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.98 E-value=3.2 Score=41.18 Aligned_cols=207 Identities=10% Similarity=-0.013 Sum_probs=102.2
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+|+.+.....|+.+.+.......+.....+.... +++..++.... .......++++|..
T Consensus 94 ~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~------------------~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 94 AILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP------------------NAADEAVLHVIDVD 155 (695)
T ss_dssp CEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE------------------TTCSCCEEEEEETT
T ss_pred EEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC------------------CCCceEEEEEEECC
Confidence 557888887788888755332111111111122222 56655553321 11124689999999
Q ss_pred CCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCC-----CCCCCceEEEEeCCCCce--EeCCCCCCC-ceeeEE-EE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLF-----SAKGTASAEVYHPELDQW--TPLPNMSTL-RYKCVG-VT 187 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~-----~~~~~~~~~~yd~~t~~W--~~~~~~p~~-~~~~~~-~~ 187 (371)
+++......++.......+..-+++.++++..+... .......+++++..+..- ..+...+.. ...... ..
T Consensus 156 tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 156 SGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp TCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 988641112222121222233366666665543210 001245699999887653 233222221 122222 23
Q ss_pred ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEe
Q 042957 188 WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYD 267 (371)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd 267 (371)
-+++..++....... ...++.+|..+..|..+...... ....+..++.+|+.... ......++++|
T Consensus 236 pDG~~l~~~~~~~~~----------~~~l~~~~~~~~~~~~l~~~~~~---~~~~~~~~g~l~~~s~~-~~~~~~l~~~d 301 (695)
T 2bkl_A 236 RDGKYLFVYILRGWS----------ENDVYWKRPGEKDFRLLVKGVGA---KYEVHAWKDRFYVLTDE-GAPRQRVFEVD 301 (695)
T ss_dssp TTSCCEEEEEEETTT----------EEEEEEECTTCSSCEEEEECSSC---CEEEEEETTEEEEEECT-TCTTCEEEEEB
T ss_pred CCCCEEEEEEeCCCC----------ceEEEEEcCCCCceEEeecCCCc---eEEEEecCCcEEEEECC-CCCCCEEEEEe
Confidence 355544444333211 14677778777778777532221 11223356666655432 22234799999
Q ss_pred CCCCc---eEee
Q 042957 268 GELNM---WDEV 276 (371)
Q Consensus 268 ~~~~~---W~~~ 276 (371)
+++.. |+.+
T Consensus 302 ~~~~~~~~~~~l 313 (695)
T 2bkl_A 302 PAKPARASWKEI 313 (695)
T ss_dssp TTBCSGGGCEEE
T ss_pred CCCCCccCCeEE
Confidence 97754 8877
No 153
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.97 E-value=2.1 Score=39.01 Aligned_cols=94 Identities=13% Similarity=0.144 Sum_probs=50.4
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+..||..+.+-... +. .|...-.+++.. ++..++.|+.+ ..+..+|..
T Consensus 145 ~~i~iwd~~~~~~~~~--~~----~h~~~v~~~~~~p~~~~l~s~s~d-----------------------~~v~iwd~~ 195 (393)
T 1erj_A 145 RLIRIWDIENRKIVMI--LQ----GHEQDIYSLDYFPSGDKLVSGSGD-----------------------RTVRIWDLR 195 (393)
T ss_dssp SCEEEEETTTTEEEEE--EC----CCSSCEEEEEECTTSSEEEEEETT-----------------------SEEEEEETT
T ss_pred CeEEEEECCCCcEEEE--Ec----cCCCCEEEEEEcCCCCEEEEecCC-----------------------CcEEEEECC
Confidence 3578889877653221 11 122222344443 45555666553 567788888
Q ss_pred CCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCce
Q 042957 117 SNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQW 170 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W 170 (371)
+.+....-.... .-..++.. ++++++.|+.+ ..+.+||..+..-
T Consensus 196 ~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~s~d--------~~v~iwd~~~~~~ 241 (393)
T 1erj_A 196 TGQCSLTLSIED--GVTTVAVSPGDGKYIAAGSLD--------RAVRVWDSETGFL 241 (393)
T ss_dssp TTEEEEEEECSS--CEEEEEECSTTCCEEEEEETT--------SCEEEEETTTCCE
T ss_pred CCeeEEEEEcCC--CcEEEEEECCCCCEEEEEcCC--------CcEEEEECCCCcE
Confidence 776433221111 11122222 57788888775 3588899887654
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.89 E-value=1.1 Score=39.13 Aligned_cols=107 Identities=14% Similarity=0.111 Sum_probs=52.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CC-EEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GD-SVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..+..+|+.+.+-...-.++... . ..+.++.. ++ .+|+.+.. ...++++|+
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~--~--~~~~~~~s~dg~~l~v~~~~-----------------------~~~v~~~d~ 63 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAG--P--TPMVPMVAPGGRIAYATVNK-----------------------SESLVKIDL 63 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCT--T--CCCCEEECTTSSEEEEEETT-----------------------TTEEEEEET
T ss_pred CeEEEEECCCCcEEEEEEcCCCC--C--CccceEEcCCCCEEEEEeCC-----------------------CCeEEEEEC
Confidence 46899999887644322222100 0 01134433 44 67777543 356899999
Q ss_pred CCCeeeecCCCCCC----CCCeeEEE-EC-CEEEEEcCCCCCCCCC---CCceEEEEeCCCCceE
Q 042957 116 KSNEWTRCAPLSVP----RYDFACTV-CD-NKIYVAGGKSNLFSAK---GTASAEVYHPELDQWT 171 (371)
Q Consensus 116 ~~~~W~~~~~~~~~----r~~~~~~~-~~-~~lyv~GG~~~~~~~~---~~~~~~~yd~~t~~W~ 171 (371)
.+.+-...-..+.+ ..-..++. -+ ..||+........... ....+.+||..+.+..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 88764332111110 01112222 23 4677764210000000 1367999999877553
No 155
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.89 E-value=0.94 Score=40.80 Aligned_cols=140 Identities=11% Similarity=0.084 Sum_probs=66.8
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC----CCCC-cee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN----MSTL-RYK 182 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~----~p~~-~~~ 182 (371)
..+..+|..+.+-...-..+..........-++..++.||.+ ..+.+|+...+.-..... +..- ..-
T Consensus 86 g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d--------~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v 157 (354)
T 2pbi_B 86 GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD--------NKCSVYPLTFDKNENMAAKKKSVAMHTNYL 157 (354)
T ss_dssp SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT--------SEEEEEECCCCTTCCSGGGCEEEEECSSCE
T ss_pred CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC--------CCEEEEEEeccccccccccceeeeccCCcE
Confidence 457777876665433222222222222233367788888876 356777765432111000 0000 000
Q ss_pred eEEEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE---CCEEEEEcCCCCC
Q 042957 183 CVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV---DNRLFSSGDCLKA 258 (371)
Q Consensus 183 ~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~ 258 (371)
..+.. -+++.++.|+.+ ..+.+||+++.+-... +..-......+... ++.+++.|+.+.
T Consensus 158 ~~~~~~~~~~~l~t~s~D--------------~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg- 220 (354)
T 2pbi_B 158 SACSFTNSDMQILTASGD--------------GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCDK- 220 (354)
T ss_dssp EEEEECSSSSEEEEEETT--------------SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETTS-
T ss_pred EEEEEeCCCCEEEEEeCC--------------CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCCC-
Confidence 11111 234444445422 4788999988754322 11100111112221 346777777655
Q ss_pred ccCeEEEEeCCCCceEe
Q 042957 259 WKGHIESYDGELNMWDE 275 (371)
Q Consensus 259 ~~~~~~~yd~~~~~W~~ 275 (371)
.+.+||+.+.+...
T Consensus 221 ---~v~~wd~~~~~~~~ 234 (354)
T 2pbi_B 221 ---KAMVWDMRSGQCVQ 234 (354)
T ss_dssp ---CEEEEETTTCCEEE
T ss_pred ---eEEEEECCCCcEEE
Confidence 49999998866443
No 156
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.89 E-value=2 Score=38.33 Aligned_cols=170 Identities=13% Similarity=0.151 Sum_probs=84.8
Q ss_pred CCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCC
Q 042957 47 NNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAP 125 (371)
Q Consensus 47 ~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 125 (371)
-.+|+.+......+ -..+.++.. ++.+|+.+.. ..+++-.-...+|+++..
T Consensus 108 G~tW~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~------------------------g~v~~S~DgG~tW~~~~~ 159 (327)
T 2xbg_A 108 GQSWSQIPLDPKLP----GSPRLIKALGNGSAEMITNV------------------------GAIYRTKDSGKNWQALVQ 159 (327)
T ss_dssp TSSCEECCCCTTCS----SCEEEEEEEETTEEEEEETT------------------------CCEEEESSTTSSEEEEEC
T ss_pred CCCceECccccCCC----CCeEEEEEECCCCEEEEeCC------------------------ccEEEEcCCCCCCEEeec
Confidence 35798876432111 112344443 5788887642 134544334568988764
Q ss_pred CCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEe-CCCCceEeCCCCCCCceeeEEEE-ECCEEEEEecccCCC
Q 042957 126 LSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYH-PELDQWTPLPNMSTLRYKCVGVT-WQGKIHVVSGFAQRA 202 (371)
Q Consensus 126 ~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd-~~t~~W~~~~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~ 202 (371)
... ..-+.++.. ++.++++|-.. .+++-+ ..-.+|+.+... .......++. -++.+|+++..
T Consensus 160 ~~~-~~~~~~~~~~~~~~~~~g~~G---------~~~~S~d~gG~tW~~~~~~-~~~~~~~~~~~~~g~~~~~~~~---- 224 (327)
T 2xbg_A 160 EAI-GVMRNLNRSPSGEYVAVSSRG---------SFYSTWEPGQTAWEPHNRT-TSRRLHNMGFTPDGRLWMIVNG---- 224 (327)
T ss_dssp SCC-CCEEEEEECTTSCEEEEETTS---------SEEEEECTTCSSCEEEECC-SSSCEEEEEECTTSCEEEEETT----
T ss_pred CCC-cceEEEEEcCCCcEEEEECCC---------cEEEEeCCCCCceeECCCC-CCCccceeEECCCCCEEEEeCC----
Confidence 322 223334333 56677665321 244433 335789987532 2233333333 36778877631
Q ss_pred CCCCCccccccCeeEEEECC-CCceeecccc--ccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 203 DSDGSVHFTERSSAEVYDTQ-AGKWDLVARM--WQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 203 ~~~~~~~~~~~~~v~~yd~~-t~~W~~~~~~--~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
..+...+.. -.+|+.+... +.. .....++.. ++++|+.|+.. .+++-.=.-.+|+.+
T Consensus 225 -----------G~~~~s~~D~G~tW~~~~~~~~~~~-~~~~~v~~~~~~~~~~~g~~g-----~i~~S~DgG~tW~~~ 285 (327)
T 2xbg_A 225 -----------GKIAFSDPDNSENWGELLSPLRRNS-VGFLDLAYRTPNEVWLAGGAG-----ALLCSQDGGQTWQQD 285 (327)
T ss_dssp -----------TEEEEEETTEEEEECCCBCTTSSCC-SCEEEEEESSSSCEEEEESTT-----CEEEESSTTSSCEEC
T ss_pred -----------ceEEEecCCCCCeeEeccCCcccCC-cceEEEEecCCCEEEEEeCCC-----eEEEeCCCCcccEEc
Confidence 123444322 4579877532 221 111233332 56888887632 244332234789988
No 157
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.88 E-value=2 Score=38.24 Aligned_cols=66 Identities=8% Similarity=-0.142 Sum_probs=39.8
Q ss_pred CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEe
Q 042957 189 QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYD 267 (371)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd 267 (371)
++++++.|+.+ ..+.+||+++.+-..+........ ..+++.. ++.+++.|+.++ .+.+||
T Consensus 138 ~~~~l~s~s~d--------------g~i~~wd~~~~~~~~~~~~~~~~~-i~~~~~~pdg~~lasg~~dg----~i~iwd 198 (343)
T 3lrv_A 138 NTEYFIWADNR--------------GTIGFQSYEDDSQYIVHSAKSDVE-YSSGVLHKDSLLLALYSPDG----ILDVYN 198 (343)
T ss_dssp -CCEEEEEETT--------------CCEEEEESSSSCEEEEECCCSSCC-CCEEEECTTSCEEEEECTTS----CEEEEE
T ss_pred CCCEEEEEeCC--------------CcEEEEECCCCcEEEEEecCCCCc-eEEEEECCCCCEEEEEcCCC----EEEEEE
Confidence 55667667633 468899998876543322222111 2233333 667888877655 499999
Q ss_pred CCCCce
Q 042957 268 GELNMW 273 (371)
Q Consensus 268 ~~~~~W 273 (371)
+.+..-
T Consensus 199 ~~~~~~ 204 (343)
T 3lrv_A 199 LSSPDQ 204 (343)
T ss_dssp SSCTTS
T ss_pred CCCCCC
Confidence 988654
No 158
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.74 E-value=1.3 Score=43.22 Aligned_cols=181 Identities=9% Similarity=-0.050 Sum_probs=88.5
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+..+|+.+.+-.. .++.. ..-|.++.. +.++|+.+ . ...+.+||+
T Consensus 177 ~~V~viD~~t~~v~~--~i~~g-----~~p~~v~~SpDGr~lyv~~-~-----------------------dg~V~viD~ 225 (567)
T 1qks_A 177 GQIALIDGSTYEIKT--VLDTG-----YAVHISRLSASGRYLFVIG-R-----------------------DGKVNMIDL 225 (567)
T ss_dssp TEEEEEETTTCCEEE--EEECS-----SCEEEEEECTTSCEEEEEE-T-----------------------TSEEEEEET
T ss_pred CeEEEEECCCCeEEE--EEeCC-----CCccceEECCCCCEEEEEc-C-----------------------CCeEEEEEC
Confidence 578999998876332 22211 112344443 35678753 2 246999998
Q ss_pred CCCeeeecCCCCCCCCCeeEEEE-----CC-EEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC-C--CC--------CC
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVC-----DN-KIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL-P--NM--------ST 178 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~-~--~~--------p~ 178 (371)
...+-+.+..++....-..++.. ++ .+|+..-. ...+.++|..+.+=... + .+ |.
T Consensus 226 ~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~--------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~ 297 (567)
T 1qks_A 226 WMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW--------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPE 297 (567)
T ss_dssp TSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE--------TTEEEEEETTTCCEEEEEECCEECTTTCCEESC
T ss_pred CCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEcc--------CCeEEEEECCCCcEEEEEeccccccccccccCC
Confidence 52221222222222212233333 44 56665322 35678889776543321 1 11 12
Q ss_pred CceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CC-EEEEEcCCC
Q 042957 179 LRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DN-RLFSSGDCL 256 (371)
Q Consensus 179 ~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~ 256 (371)
+|.....+..++..+++.-. ....+...|..+.....+..++..+. .+.+... ++ .+|+....
T Consensus 298 ~rva~i~~s~~~~~~vv~~~-------------~~g~v~~vd~~~~~~~~v~~i~~~~~-~~d~~~~pdgr~~~va~~~- 362 (567)
T 1qks_A 298 PRVAAILASHYRPEFIVNVK-------------ETGKILLVDYTDLNNLKTTEISAERF-LHDGGLDGSHRYFITAANA- 362 (567)
T ss_dssp CCEEEEEECSSSSEEEEEET-------------TTTEEEEEETTCSSEEEEEEEECCSS-EEEEEECTTSCEEEEEEGG-
T ss_pred CceEEEEEcCCCCEEEEEec-------------CCCeEEEEecCCCccceeeeeecccc-ccCceECCCCCEEEEEeCC-
Confidence 23333223334444444321 12477888887766555544433332 2223222 33 44554322
Q ss_pred CCccCeEEEEeCCCCceEe
Q 042957 257 KAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 257 ~~~~~~~~~yd~~~~~W~~ 275 (371)
.+.+.++|.++++-..
T Consensus 363 ---sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 363 ---RNKLVVIDTKEGKLVA 378 (567)
T ss_dssp ---GTEEEEEETTTTEEEE
T ss_pred ---CCeEEEEECCCCcEEE
Confidence 2469999999886443
No 159
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.74 E-value=0.29 Score=52.21 Aligned_cols=176 Identities=10% Similarity=0.042 Sum_probs=87.8
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKS 117 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 117 (371)
..+..||..+++...+.... ..-.+++...+..++.|+.+ ..+..+|..+
T Consensus 1025 g~i~vwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~l~~~~~d-----------------------g~v~vwd~~~ 1074 (1249)
T 3sfz_A 1025 SVIQVWNWQTGDYVFLQAHQ-------ETVKDFRLLQDSRLLSWSFD-----------------------GTVKVWNVIT 1074 (1249)
T ss_dssp SBEEEEETTTTEEECCBCCS-------SCEEEEEECSSSEEEEEESS-----------------------SEEEEEETTT
T ss_pred CEEEEEECCCCceEEEecCC-------CcEEEEEEcCCCcEEEEECC-----------------------CcEEEEECCC
Confidence 35788998888766543322 12224444444445555542 4678888877
Q ss_pred CeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCcee-eEE-EEECCEEEEE
Q 042957 118 NEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYK-CVG-VTWQGKIHVV 195 (371)
Q Consensus 118 ~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~-~~~-~~~~~~lyv~ 195 (371)
.+-...-..........+..-+++.++.|+.++ .+.+||..+.+ .+..+...... .++ ..-++++++.
T Consensus 1075 ~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~--------~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat 1144 (1249)
T 3sfz_A 1075 GRIERDFTCHQGTVLSCAISSDATKFSSTSADK--------TAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLAT 1144 (1249)
T ss_dssp TCCCEEEECCSSCCCCEEECSSSSSCEEECCSS--------CCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEE
T ss_pred CceeEEEcccCCcEEEEEECCCCCEEEEEcCCC--------cEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEE
Confidence 653221111111222223334666777777652 46778876653 22222211111 112 2336677777
Q ss_pred ecccCCCCCCCCccccccCeeEEEECCCCceeecc-ccc------cCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEe
Q 042957 196 SGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVA-RMW------QLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYD 267 (371)
Q Consensus 196 GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~-~~~------~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd 267 (371)
|+.+ ..+.+||..+.+-.... +.. ........++.. ++++++.++ +.+.+||
T Consensus 1145 ~~~d--------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~------g~v~vwd 1204 (1249)
T 3sfz_A 1145 GDDN--------------GEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG------GYLKWWN 1204 (1249)
T ss_dssp EETT--------------SCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES------SSEEEBC
T ss_pred EeCC--------------CEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC------CeEEEEE
Confidence 7643 35778888876533221 110 001111123332 455555554 2599999
Q ss_pred CCCCce
Q 042957 268 GELNMW 273 (371)
Q Consensus 268 ~~~~~W 273 (371)
+.+.+-
T Consensus 1205 ~~~g~~ 1210 (1249)
T 3sfz_A 1205 VATGDS 1210 (1249)
T ss_dssp SSSCBC
T ss_pred CCCCce
Confidence 887543
No 160
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.70 E-value=1.1 Score=41.60 Aligned_cols=105 Identities=7% Similarity=0.002 Sum_probs=52.2
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCc-eEeCCCCCCCcee-eEEEEE-CC-EEEEEecccCCCCCCCCccccccC
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQ-WTPLPNMSTLRYK-CVGVTW-QG-KIHVVSGFAQRADSDGSVHFTERS 214 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~~~~-~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~ 214 (371)
++.+++.|+.+ ..+.+||..+.. .+.+..+...... ..++.. ++ .+++.|+.. .
T Consensus 243 ~~~~l~s~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d--------------g 300 (430)
T 2xyi_A 243 HESLFGSVADD--------QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD--------------K 300 (430)
T ss_dssp CTTEEEEEETT--------SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT--------------S
T ss_pred CCCEEEEEeCC--------CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC--------------C
Confidence 56677777654 468899988652 1111111111111 122222 23 377777643 4
Q ss_pred eeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCC
Q 042957 215 SAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGEL 270 (371)
Q Consensus 215 ~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~ 270 (371)
.+.+||+.+.. ..+..+.........+... +..+++.++..+ .+.+||+..
T Consensus 301 ~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~----~i~iwd~~~ 353 (430)
T 2xyi_A 301 TVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDR----RLHVWDLSK 353 (430)
T ss_dssp EEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTTEEEEEETTS----CCEEEEGGG
T ss_pred eEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC----cEEEEeCCC
Confidence 68899988632 1111111111111123222 335777777554 488888876
No 161
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.68 E-value=2.4 Score=42.62 Aligned_cols=134 Identities=11% Similarity=0.088 Sum_probs=74.4
Q ss_pred eEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC----CCCCCceeeE
Q 042957 109 WVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP----NMSTLRYKCV 184 (371)
Q Consensus 109 ~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~----~~p~~~~~~~ 184 (371)
.+.+||+.++++....... ...-.+++..++.|++... .-+++||..+++.+... .++.... .+
T Consensus 83 Gl~~yd~~~~~f~~~~~~~-~~~i~~i~~~~g~lWigt~----------~Gl~~~~~~~~~~~~~~~~~~~l~~~~i-~~ 150 (758)
T 3ott_A 83 GILVYNYRADRYEQPETDF-PTDVRTMALQGDTLWLGAL----------NGLYTYQLQSRKLTSFDTRRNGLPNNTI-YS 150 (758)
T ss_dssp EEEEEETTTTEECCCSCCC-CSCEEEEEEETTEEEEEET----------TEEEEEETTTCCEEEECHHHHCCSCSCE-EE
T ss_pred CeEEEeCCCCEEECcccCC-CceEEEEEecCCcEEEEcC----------CcceeEeCCCCeEEEeccCCCCcCCCeE-EE
Confidence 4789999998886521111 1111123335788887521 24889999988887652 2232221 12
Q ss_pred EEEE-CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCC--C-CCCeEEEE--CCEEEEEcCCCCC
Q 042957 185 GVTW-QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLD--I-PPNQIVEV--DNRLFSSGDCLKA 258 (371)
Q Consensus 185 ~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~--~-~~~~~~~~--~~~iyv~GG~~~~ 258 (371)
++.. ++.|+|.. ...+.+||+.+++++......... . ...+++.. ++.|++-. .
T Consensus 151 i~~d~~g~lWigt----------------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt--~-- 210 (758)
T 3ott_A 151 IIRTKDNQIYVGT----------------YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT--E-- 210 (758)
T ss_dssp EEECTTCCEEEEE----------------TTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE--E--
T ss_pred EEEcCCCCEEEEe----------------CCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE--C--
Confidence 2222 67788743 135788999988876553211110 0 01123333 23567632 1
Q ss_pred ccCeEEEEeCCCCceEee
Q 042957 259 WKGHIESYDGELNMWDEV 276 (371)
Q Consensus 259 ~~~~~~~yd~~~~~W~~~ 276 (371)
..+..||+.+++++..
T Consensus 211 --~Gl~~~~~~~~~~~~~ 226 (758)
T 3ott_A 211 --GYLFQYFPSTGQIKQT 226 (758)
T ss_dssp --EEEEEEETTTTEEEEE
T ss_pred --CCCeEEcCCCCeEEec
Confidence 1499999999988776
No 162
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.67 E-value=1.3 Score=44.56 Aligned_cols=106 Identities=9% Similarity=0.011 Sum_probs=62.1
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC--CCCCceeeEEEE-ECCEEEEEecccCCCCCCCCccccccCe
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN--MSTLRYKCVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSS 215 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 215 (371)
++.|++++|.. .-+.+||+.+++++.... +.......++.. .++.|++.. ..-
T Consensus 482 ~g~lWi~~~t~--------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt----------------~~G 537 (758)
T 3ott_A 482 EGNVWVLLYNN--------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF----------------HGG 537 (758)
T ss_dssp TSCEEEEETTC--------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE----------------TTE
T ss_pred CCCEEEEccCC--------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe----------------cCc
Confidence 57888866653 238899999998887632 111111112222 256788643 135
Q ss_pred eEEEECCCCceeecc--ccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 216 AEVYDTQAGKWDLVA--RMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 216 v~~yd~~t~~W~~~~--~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
+.+||+++++++... .++. ....+++.-++.|++... +.+.+||+++.+.+..
T Consensus 538 l~~~~~~~~~~~~~~~~gl~~--~~i~~i~~~~g~lWi~t~------~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 538 VMRINPKDESQQSISFGSFSN--NEILSMTCVKNSIWVSTT------NGLWIIDRKTMDARQQ 592 (758)
T ss_dssp EEEECC--CCCCBCCCCC-----CCEEEEEEETTEEEEEES------SCEEEEETTTCCEEEC
T ss_pred eEEEecCCCceEEecccCCCc--cceEEEEECCCCEEEECC------CCeEEEcCCCceeEEe
Confidence 788999988876653 2222 112244445788888642 2499999999887754
No 163
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.61 E-value=1.8 Score=37.95 Aligned_cols=103 Identities=9% Similarity=-0.067 Sum_probs=55.4
Q ss_pred ECCE-EEEEcCCCCCCCCCCCceEEEEeC-CCCceEeCCC--CCCCceeeEEEEECCEEEEEecccCCCCCCCCcccccc
Q 042957 138 CDNK-IYVAGGKSNLFSAKGTASAEVYHP-ELDQWTPLPN--MSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTER 213 (371)
Q Consensus 138 ~~~~-lyv~GG~~~~~~~~~~~~~~~yd~-~t~~W~~~~~--~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~ 213 (371)
-+++ .++.|+.+ ..+.+||. .+.....+.. ...... .++...+.+++.++..
T Consensus 66 ~~~~~~l~~~~~d--------g~i~~wd~~~~~~~~~~~~~~~~~~v~--~l~~~~~~~l~s~~~d-------------- 121 (342)
T 1yfq_A 66 DNTDLQIYVGTVQ--------GEILKVDLIGSPSFQALTNNEANLGIC--RICKYGDDKLIAASWD-------------- 121 (342)
T ss_dssp ESSSEEEEEEETT--------SCEEEECSSSSSSEEECBSCCCCSCEE--EEEEETTTEEEEEETT--------------
T ss_pred CCCCcEEEEEcCC--------CeEEEEEeccCCceEeccccCCCCceE--EEEeCCCCEEEEEcCC--------------
Confidence 3666 77777764 36899999 8887766654 222222 2233324555555433
Q ss_pred CeeEEEECCCCc-------eeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCC
Q 042957 214 SSAEVYDTQAGK-------WDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGEL 270 (371)
Q Consensus 214 ~~v~~yd~~t~~-------W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~ 270 (371)
..+.+||+.+.. .+.+..+... ....+++...+. +++|+... .+.+||+.+
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~-l~~~~~d~----~i~i~d~~~ 179 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVK-NKIFTMDTNSSR-LIVGMNNS----QVQWFRLPL 179 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSSSSSSC-CCEEEEEECSSE-EEEEESTT----EEEEEESSC
T ss_pred CeEEEEcccccccccccccCCeeeEEeeC-CceEEEEecCCc-EEEEeCCC----eEEEEECCc
Confidence 467888876400 1222222211 111234444555 55554433 599999987
No 164
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.59 E-value=1.7 Score=40.20 Aligned_cols=103 Identities=6% Similarity=-0.054 Sum_probs=51.9
Q ss_pred EEEEcCCCCCCCCCCCceEEEEeCCCCc---eEe--CCCCC-CCceeeEEEEE--CCEEEEEecccCCCCCCCCcccccc
Q 042957 142 IYVAGGKSNLFSAKGTASAEVYHPELDQ---WTP--LPNMS-TLRYKCVGVTW--QGKIHVVSGFAQRADSDGSVHFTER 213 (371)
Q Consensus 142 lyv~GG~~~~~~~~~~~~~~~yd~~t~~---W~~--~~~~p-~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~ 213 (371)
+++.|+.+ ..+.+||..+.. +.. ...+. ....-..++.. ++.+++.++..
T Consensus 196 ~l~s~~~d--------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-------------- 253 (430)
T 2xyi_A 196 YLLSASDD--------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-------------- 253 (430)
T ss_dssp EEEEECTT--------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT--------------
T ss_pred eEEEEeCC--------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC--------------
Confidence 67777765 358889887631 211 11111 11111222222 45677666533
Q ss_pred CeeEEEECCCCc-eeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCC
Q 042957 214 SSAEVYDTQAGK-WDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGEL 270 (371)
Q Consensus 214 ~~v~~yd~~t~~-W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~ 270 (371)
..+.+||+.+.. ...+..+........+++.. +..+++.|+..+ .+.+||+.+
T Consensus 254 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg----~v~vwd~~~ 309 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK----TVALWDLRN 309 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS----EEEEEETTC
T ss_pred CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC----eEEEEeCCC
Confidence 478999998763 12222111111111123332 334788877655 499999876
No 165
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.53 E-value=0.75 Score=42.43 Aligned_cols=135 Identities=10% Similarity=0.108 Sum_probs=69.4
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
+.|+.+|..+++-.++-.+......-.++. -+++.++.|+.+ ..+.+||..+.+-...-.-...+ ...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D--------g~v~iWd~~~~~~~~~~~~h~~~--v~~ 194 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS--------AEVQLWDVQQQKRLRNMTSHSAR--VGS 194 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTEEEEEECCCSSC--EEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC--------CeEEEEEcCCCcEEEEEeCCCCc--eEE
Confidence 468888888887655433322222212222 267778888875 35889999877543221111111 223
Q ss_pred EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCCccCeEE
Q 042957 186 VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 264 (371)
...++.+.+.|+.. ..+..+|......... .+..-......+.. .+++.++.++.++ .+.
T Consensus 195 ~s~~~~~l~sgs~d--------------~~i~~~d~~~~~~~~~-~~~~h~~~~~~~~~~~~g~~l~s~~~D~----~v~ 255 (420)
T 4gga_A 195 LSWNSYILSSGSRS--------------GHIHHHDVRVAEHHVA-TLSGHSQEVCGLRWAPDGRHLASGGNDN----LVN 255 (420)
T ss_dssp EEEETTEEEEEETT--------------SEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSSEEEEEETTS----CEE
T ss_pred EeeCCCEEEEEeCC--------------CceeEeeecccceeeE-EecccccceeeeeecCCCCeeeeeeccc----cce
Confidence 34566666666543 4567777765543221 11110111111111 2455666666544 378
Q ss_pred EEeCCCC
Q 042957 265 SYDGELN 271 (371)
Q Consensus 265 ~yd~~~~ 271 (371)
++|..+.
T Consensus 256 i~~~~~~ 262 (420)
T 4gga_A 256 VWPSAPG 262 (420)
T ss_dssp EEESSCC
T ss_pred EEeeccc
Confidence 8887654
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.52 E-value=0.66 Score=41.90 Aligned_cols=153 Identities=7% Similarity=-0.009 Sum_probs=79.7
Q ss_pred ccceEEEEECCCCeeeecCCCCCCCCCeeEEEE-CCE-EEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee
Q 042957 106 VLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVC-DNK-IYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC 183 (371)
Q Consensus 106 ~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~ 183 (371)
....++.+|+.+++...+.... ....+....- +++ |++... .. .......++.+|..+..++.+..-.......
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~sp~dg~~l~~~~~-~~--~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDT-AWLGHPIYRPFDDSTVGFCHE-GP--HDLVDARMWLVNEDGSNVRKIKEHAEGESCT 241 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEEC-SC--SSSCSCCCEEEETTSCCCEESSCCCTTEEEE
T ss_pred CcceEEEEECCCCcEEeeccCC-cccccceECCCCCCEEEEEec-CC--CCCCCceEEEEECCCCceeEeeccCCCcccc
Confidence 3457899999888776654211 1112222222 344 544432 11 1112357899999888877775411111111
Q ss_pred EEE-EECCE-EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCC----
Q 042957 184 VGV-TWQGK-IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCL---- 256 (371)
Q Consensus 184 ~~~-~~~~~-lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~---- 256 (371)
..+ .-+++ |++.. ..... ....++++|+.+++.+.+...+.. .....- +++++++.+..
T Consensus 242 ~~~~spdg~~l~~~~-~~~~~---------~~~~l~~~d~~~g~~~~l~~~~~~----~~~~s~~dg~~l~~~~~~~p~~ 307 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVS-YFKGQ---------TDRVIYKANPETLENEEVMVMPPC----SHLMSNFDGSLMVGDGCDAPVD 307 (396)
T ss_dssp EEEECTTSSCEEEEE-EETTT---------CCEEEEEECTTTCCEEEEEECCSE----EEEEECSSSSEEEEEECCC---
T ss_pred ceEECCCCCEEEEEe-cCCCC---------ccceEEEEECCCCCeEEeeeCCCC----CCCccCCCCceEEEecCCccee
Confidence 122 22555 44443 22211 113489999998877666543311 112223 66666654321
Q ss_pred --------CCccCeEEEEeCCCCceEee
Q 042957 257 --------KAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 257 --------~~~~~~~~~yd~~~~~W~~~ 276 (371)
......++++|+.+...+.+
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCEE
T ss_pred eccccccccCCCCcEEEEecccCceEEc
Confidence 11235799999998877666
No 167
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.52 E-value=2.3 Score=37.49 Aligned_cols=94 Identities=7% Similarity=-0.029 Sum_probs=49.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
..+..||..+.+-... +. .|...-.++... ++.+++.|+.+ ..+..+|.
T Consensus 95 g~i~v~d~~~~~~~~~--~~----~~~~~i~~~~~~~~~~~~l~s~~~d-----------------------g~i~iwd~ 145 (366)
T 3k26_A 95 GIIRIINPITMQCIKH--YV----GHGNAINELKFHPRDPNLLLSVSKD-----------------------HALRLWNI 145 (366)
T ss_dssp CEEEEECTTTCCEEEE--EE----SCCSCEEEEEECSSCTTEEEEEETT-----------------------SCEEEEET
T ss_pred CEEEEEEchhceEeee--ec----CCCCcEEEEEECCCCCCEEEEEeCC-----------------------CeEEEEEe
Confidence 3578888876652221 11 011122234443 45677777653 45888898
Q ss_pred CCCeeeec-CCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCC
Q 042957 116 KSNEWTRC-APLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELD 168 (371)
Q Consensus 116 ~~~~W~~~-~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 168 (371)
.+.+-... ..+.........+. -++..++.|+.+ ..+.+||..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~ 193 (366)
T 3k26_A 146 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD--------HSLKLWRINSK 193 (366)
T ss_dssp TTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT--------SCEEEEESCSH
T ss_pred ecCeEEEEecccccccCceeEEEECCCCCEEEEecCC--------CCEEEEECCCC
Confidence 87764332 21121112222222 246667777764 35888888765
No 168
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.51 E-value=0.37 Score=44.87 Aligned_cols=108 Identities=8% Similarity=-0.004 Sum_probs=61.0
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCC-CCceeeEEEE--ECCEEEEEecccCCCCCCCCccccccCe
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMS-TLRYKCVGVT--WQGKIHVVSGFAQRADSDGSVHFTERSS 215 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 215 (371)
++.+++.|+.++ .+.+||..+..-..+-.+. ....-.+++. .++.+++.|+.+ ..
T Consensus 131 ~~~~lasGs~dg--------~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D--------------~~ 188 (435)
T 4e54_B 131 HPSTVAVGSKGG--------DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME--------------GT 188 (435)
T ss_dssp CTTCEEEEETTS--------CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS--------------SC
T ss_pred CCCEEEEEeCCC--------EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC--------------CE
Confidence 456788887763 5888998776543322221 1111122233 255566666543 46
Q ss_pred eEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 216 AEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 216 v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+.+||++++....+...........+++.. ++++++.|+... .+.+||+....
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg----~i~~wd~~~~~ 242 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG----NVILLNMDGKE 242 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS----BEEEEESSSCB
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC----cEeeeccCcce
Confidence 788999887665543322222212234333 667888887655 49999987653
No 169
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.42 E-value=0.5 Score=41.87 Aligned_cols=119 Identities=5% Similarity=-0.074 Sum_probs=66.0
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE-ECCEEEEEecccCCCCCCCCccccccCeeE
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAE 217 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~ 217 (371)
+++||+.+... ..+++||+.+.+.+.+...+... -..++. -+++||+....... ....+.
T Consensus 55 ~g~l~~~~~~~--------~~i~~~d~~~~~~~~~~~~~~~~-~~~i~~~~dg~l~v~~~~~~~----------~~~~i~ 115 (333)
T 2dg1_A 55 QGQLFLLDVFE--------GNIFKINPETKEIKRPFVSHKAN-PAAIKIHKDGRLFVCYLGDFK----------STGGIF 115 (333)
T ss_dssp TSCEEEEETTT--------CEEEEECTTTCCEEEEEECSSSS-EEEEEECTTSCEEEEECTTSS----------SCCEEE
T ss_pred CCCEEEEECCC--------CEEEEEeCCCCcEEEEeeCCCCC-cceEEECCCCcEEEEeCCCCC----------CCceEE
Confidence 57788876543 46899999988877653211111 222333 36788887632211 114789
Q ss_pred EEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCC--CCccCeEEEEeCCCCceEee
Q 042957 218 VYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCL--KAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 218 ~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~--~~~~~~~~~yd~~~~~W~~~ 276 (371)
+||+++.....+............++.. ++++|+..... ......+++||+++.+...+
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 9999888765332111111111223332 56788764321 11234699999987776665
No 170
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.41 E-value=4.4 Score=40.18 Aligned_cols=203 Identities=9% Similarity=-0.053 Sum_probs=101.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..++.+|..+++......++ .... ..++.. +++.++++..+..... . .........+++++..
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~-----~~~~-~~~~wspDg~~l~~~~~d~~~~~-------~---~~~~~~~~~v~~~~l~ 210 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIE-----GGKY-ATPKWTPDSKGFYYEWLPTDPSI-------K---VDERPGYTTIRYHTLG 210 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBS-----CCTT-CCCEECTTSSEEEEEECCCCTTS-------C---GGGGGGGCEEEEEETT
T ss_pred EEEEEEECCCCCCcCCcccC-----cccc-cceEEecCCCEEEEEEecCCCCC-------c---cccCCCCCEEEEEECC
Confidence 46889999988864111111 1111 233333 5666666544311000 0 0011235679999988
Q ss_pred CCeee--ecCCCCCC-CCCeeEE-EECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEE
Q 042957 117 SNEWT--RCAPLSVP-RYDFACT-VCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKI 192 (371)
Q Consensus 117 ~~~W~--~~~~~~~~-r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~l 192 (371)
+.+-+ .+...+.. ....... .-+++.+++..... . ....++.+|..+..|+.+..-...... .+..++.+
T Consensus 211 t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~--~--~~~~l~~~~~~~~~~~~l~~~~~~~~~--~~~~~g~l 284 (695)
T 2bkl_A 211 TEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG--W--SENDVYWKRPGEKDFRLLVKGVGAKYE--VHAWKDRF 284 (695)
T ss_dssp SCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET--T--TEEEEEEECTTCSSCEEEEECSSCCEE--EEEETTEE
T ss_pred CCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC--C--CceEEEEEcCCCCceEEeecCCCceEE--EEecCCcE
Confidence 77632 23222222 1222222 23555444443321 0 245788888777778777543222222 22356666
Q ss_pred EEEecccCCCCCCCCccccccCeeEEEECCCCc---eeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCC
Q 042957 193 HVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK---WDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGE 269 (371)
Q Consensus 193 yv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~---W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~ 269 (371)
|+...... ....+..+|+.+.. |+.+-...... ....++..+++|++....+. ...++++|+.
T Consensus 285 ~~~s~~~~-----------~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~l~~~~~~~~~lv~~~~~dg--~~~l~~~~~~ 350 (695)
T 2bkl_A 285 YVLTDEGA-----------PRQRVFEVDPAKPARASWKEIVPEDSSA-SLLSVSIVGGHLSLEYLKDA--TSEVRVATLK 350 (695)
T ss_dssp EEEECTTC-----------TTCEEEEEBTTBCSGGGCEEEECCCSSC-EEEEEEEETTEEEEEEEETT--EEEEEEEETT
T ss_pred EEEECCCC-----------CCCEEEEEeCCCCCccCCeEEecCCCCC-eEEEEEEECCEEEEEEEECC--EEEEEEEeCC
Confidence 66543321 12578999987754 77664321111 11234555888888754322 2358888876
Q ss_pred CCceEee
Q 042957 270 LNMWDEV 276 (371)
Q Consensus 270 ~~~W~~~ 276 (371)
...-+.+
T Consensus 351 g~~~~~l 357 (695)
T 2bkl_A 351 GKPVRTV 357 (695)
T ss_dssp CCEEEEC
T ss_pred CCeeEEe
Confidence 5544444
No 171
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.40 E-value=3.8 Score=39.44 Aligned_cols=146 Identities=12% Similarity=0.047 Sum_probs=74.9
Q ss_pred cceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCE-EEEEcCCCCCCCCCCCceEEEEeCCCCceEeC---CCCCCCce
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNK-IYVAGGKSNLFSAKGTASAEVYHPELDQWTPL---PNMSTLRY 181 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~---~~~p~~~~ 181 (371)
...++.+|..+.+-..+..++..+.-+.++. -+++ +|+.+.. .+.+.++|..+++-... ...|.+..
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~--------~~~v~v~D~~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN--------SNKVAVIDSKDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG--------GTEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC--------CCeEEEEECCCCeEEEeeccCCCCCCCC
Confidence 4678889887643211111112222222232 2444 5555332 25688899998865432 22333322
Q ss_pred eeEEEEE-CCEEEEEecccCCCCCCCCccccccCeeEEEECCCC-----ceeeccccccCCCCCCeEEEE--CCEEEEEc
Q 042957 182 KCVGVTW-QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG-----KWDLVARMWQLDIPPNQIVEV--DNRLFSSG 253 (371)
Q Consensus 182 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~-----~W~~~~~~~~~~~~~~~~~~~--~~~iyv~G 253 (371)
....+.- ++.+|+.+.... .+|.++|..+. .|+.+..++........+... +..||+-.
T Consensus 373 g~~~~~p~~g~~~~s~~~~d-------------~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 373 GANFVHPKYGPVWSTSHLGD-------------GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp CEEEEETTTEEEEEEEBSSS-------------SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred CcccCCCCCccEEEeccCCC-------------ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 2222222 367887764221 46888888773 388777666433222223333 34566543
Q ss_pred CCCC--CccCeEEEEeCCCCce
Q 042957 254 DCLK--AWKGHIESYDGELNMW 273 (371)
Q Consensus 254 G~~~--~~~~~~~~yd~~~~~W 273 (371)
-.+. ...+.|.+||.++.+-
T Consensus 440 ~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 440 TFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp TTCSSHHHHTCEEEEETTCTTS
T ss_pred CCCCCcccCceEEEEECCCCCC
Confidence 1111 1235799999998763
No 172
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.38 E-value=1.5 Score=38.70 Aligned_cols=194 Identities=13% Similarity=0.101 Sum_probs=97.9
Q ss_pred cceeEEeCCCCceeccCCCCcc-------------cccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccc
Q 042957 38 NWLASYNPSNNTWSHVSHIPDL-------------LENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDA 102 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~-------------~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 102 (371)
..+++||+.+..+..+...... .......-++++.. ++.|||.-..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------------------- 100 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------------------- 100 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-------------------
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-------------------
Confidence 4588999988776654321100 00000122456665 5789987322
Q ss_pred cccccceEEEEECCCCeeeecCCCCC--C-CCCeeEEEE--CCEEEEEcCCCCCCC---------CCCCceEEEEeCCCC
Q 042957 103 YDKVLAWVLRYNVKSNEWTRCAPLSV--P-RYDFACTVC--DNKIYVAGGKSNLFS---------AKGTASAEVYHPELD 168 (371)
Q Consensus 103 ~~~~~~~v~~yd~~~~~W~~~~~~~~--~-r~~~~~~~~--~~~lyv~GG~~~~~~---------~~~~~~~~~yd~~t~ 168 (371)
..+.+||+.+++.+.+..... + ..-..+++. ++.||+.-....... ......+++||+.+.
T Consensus 101 -----~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 101 -----YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp -----TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred -----CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 237888887666554432111 1 111223332 578888632210000 012357999999887
Q ss_pred ceEeCCC-CCCCceeeEEEEE-CC-EEEEEecccCCCCCCCCccccccCeeEEEECCCC---ceeeccccccCCCCCCeE
Q 042957 169 QWTPLPN-MSTLRYKCVGVTW-QG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG---KWDLVARMWQLDIPPNQI 242 (371)
Q Consensus 169 ~W~~~~~-~p~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~---~W~~~~~~~~~~~~~~~~ 242 (371)
+.+.+.. +..+ ..++.. ++ .||+.-.. ...|.+||+... ..+.+..++. ...+
T Consensus 176 ~~~~~~~~~~~p---~gia~~~dg~~lyv~d~~--------------~~~I~~~~~~~~~~~~~~~~~~~~g----P~gi 234 (322)
T 2fp8_A 176 ETTLLLKELHVP---GGAEVSADSSFVLVAEFL--------------SHQIVKYWLEGPKKGTAEVLVKIPN----PGNI 234 (322)
T ss_dssp EEEEEEEEESCC---CEEEECTTSSEEEEEEGG--------------GTEEEEEESSSTTTTCEEEEEECSS----EEEE
T ss_pred EEEEeccCCccC---cceEECCCCCEEEEEeCC--------------CCeEEEEECCCCcCCccceEEeCCC----CCCe
Confidence 6654321 1111 122333 33 58887532 257889998753 3333332221 2344
Q ss_pred EEE-CCEEEEEcCCCC------CccCeEEEEeCCCCceEee
Q 042957 243 VEV-DNRLFSSGDCLK------AWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 243 ~~~-~~~iyv~GG~~~------~~~~~~~~yd~~~~~W~~~ 276 (371)
+.- ++.||+...... .....+.+||+....-..+
T Consensus 235 ~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~ 275 (322)
T 2fp8_A 235 KRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVI 275 (322)
T ss_dssp EECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEE
Confidence 443 467888753210 0123599999976655555
No 173
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.33 E-value=2 Score=35.82 Aligned_cols=148 Identities=14% Similarity=0.046 Sum_probs=81.0
Q ss_pred EEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeee--c----CCCCCCCCCeeEEEE--CC
Q 042957 69 SIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTR--C----APLSVPRYDFACTVC--DN 140 (371)
Q Consensus 69 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~--~----~~~~~~r~~~~~~~~--~~ 140 (371)
+++...+++|+|=|. .+|+++.....+.. + +.+|. ... |+... ++
T Consensus 28 Ai~~~~g~~y~Fkg~-------------------------~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~ 80 (207)
T 1pex_A 28 AITSLRGETMIFKDR-------------------------FFWRLHPQQVDAELFLTKSFWPELPN-RID-AAYEHPSHD 80 (207)
T ss_dssp EEEEETTEEEEEETT-------------------------EEEEECSSSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTT
T ss_pred EEEeCCCcEEEEECC-------------------------EEEEEeCCCcCCCceehhHhccCCCC-Ccc-EEEEeccCC
Confidence 556678999999664 37887765433221 1 23342 122 22222 58
Q ss_pred EEEEEcCCCCCCCCCCCceEEEEeCCCCc---eEeCCC--CCCC--ceeeEEEEE-CCEEEEEecccCCCCCCCCccccc
Q 042957 141 KIYVAGGKSNLFSAKGTASAEVYHPELDQ---WTPLPN--MSTL--RYKCVGVTW-QGKIHVVSGFAQRADSDGSVHFTE 212 (371)
Q Consensus 141 ~lyv~GG~~~~~~~~~~~~~~~yd~~t~~---W~~~~~--~p~~--~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 212 (371)
++|+|-|. .+++|+..+.. =+.+.. +|.. ...++.... ++++|+|-|
T Consensus 81 ~iyfFkG~----------~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------------- 135 (207)
T 1pex_A 81 LIFIFRGR----------KFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------------- 135 (207)
T ss_dssp EEEEEETT----------EEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET---------------
T ss_pred cEEEEccC----------EEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC---------------
Confidence 99999764 36667533211 123332 3432 222222222 489999986
Q ss_pred cCeeEEEECCCCceeec-----c-ccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEe
Q 042957 213 RSSAEVYDTQAGKWDLV-----A-RMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 213 ~~~v~~yd~~t~~W~~~-----~-~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~ 275 (371)
+..++||..+++-..- . ..+.......++...++++|++-|. ..++||..+++-..
T Consensus 136 -~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~iDaAf~~~g~~YfFkg~------~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 136 -NQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGP------IQFEYSIWSNRIVR 197 (207)
T ss_dssp -TEEEEEETTTTEECSSCCCBHHHHSTTSCSCCSEEEEETTEEEEEETT------EEEEEETTTTEEEE
T ss_pred -CEEEEEeCcCccccCCCCccHHHcCCCCCCCccEEEEcCCcEEEEECC------EEEEEeCCccEEec
Confidence 4678899876543211 1 0111111233555679999999653 58899988765443
No 174
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.27 E-value=0.73 Score=49.10 Aligned_cols=175 Identities=10% Similarity=0.032 Sum_probs=89.5
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT 187 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~ 187 (371)
..+..||..+.+..................-+++.++.|+.+ ..+.+||..+............. ..++.
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d--------g~i~vwd~~~~~~~~~~~~~~~v--~~~~~ 1052 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED--------SVIQVWNWQTGDYVFLQAHQETV--KDFRL 1052 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS--------SBEEEEETTTTEEECCBCCSSCE--EEEEE
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC--------CEEEEEECCCCceEEEecCCCcE--EEEEE
Confidence 457778877665433221111122222233366777777765 36899999988766544322222 12223
Q ss_pred E-CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCCccCeEEE
Q 042957 188 W-QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGHIES 265 (371)
Q Consensus 188 ~-~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 265 (371)
. ++++ +.++.. ..+..||..+.+-...-..... ....++. -++++++.|+..+ .+.+
T Consensus 1053 ~~~~~l-~~~~~d--------------g~v~vwd~~~~~~~~~~~~~~~--~v~~~~~s~d~~~l~s~s~d~----~v~i 1111 (1249)
T 3sfz_A 1053 LQDSRL-LSWSFD--------------GTVKVWNVITGRIERDFTCHQG--TVLSCAISSDATKFSSTSADK----TAKI 1111 (1249)
T ss_dssp CSSSEE-EEEESS--------------SEEEEEETTTTCCCEEEECCSS--CCCCEEECSSSSSCEEECCSS----CCCE
T ss_pred cCCCcE-EEEECC--------------CcEEEEECCCCceeEEEcccCC--cEEEEEECCCCCEEEEEcCCC----cEEE
Confidence 3 4444 444432 4788999988754322111111 1112333 3566777776554 3888
Q ss_pred EeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 266 YDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 266 yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
||..+.. .+ ..+... ..........-++++++.|+.++ .|.+||..+.
T Consensus 1112 wd~~~~~--~~-----~~l~~h-------------~~~v~~~~~s~dg~~lat~~~dg---------~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1112 WSFDLLS--PL-----HELKGH-------------NGCVRCSAFSLDGILLATGDDNG---------EIRIWNVSDG 1159 (1249)
T ss_dssp ECSSSSS--CS-----BCCCCC-------------SSCEEEEEECSSSSEEEEEETTS---------CCCEEESSSS
T ss_pred EECCCcc--ee-----eeeccC-------------CCcEEEEEECCCCCEEEEEeCCC---------EEEEEECCCC
Confidence 8887643 22 222211 01112222233677888876543 4678888754
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.20 E-value=2 Score=37.17 Aligned_cols=146 Identities=8% Similarity=-0.030 Sum_probs=72.6
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCC----cee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTL----RYK 182 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~----~~~ 182 (371)
..+++||+.++ .+.+.. +.. .-.+++. -++++|+.... ...+.+||+.+++.+.+...... +..
T Consensus 50 ~~i~~~~~~~~-~~~~~~-~~~-~~~~l~~~~dg~l~v~~~~--------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 118 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMH-PSH-HQNGHCLNKQGHLIACSHG--------LRRLERQREPGGEWESIADSFEGKKLNSPN 118 (296)
T ss_dssp TEEEEEETTSC-EEEEES-SCS-SEEEEEECTTCCEEEEETT--------TTEEEEECSTTCCEEEEECEETTEECCCCC
T ss_pred CEEEEEECCCC-eEEEEC-CCC-CcceeeECCCCcEEEEecC--------CCeEEEEcCCCCcEEEEeeccCCCCCCCCC
Confidence 57899999887 554432 111 1123333 36788876432 24689999988887765321111 111
Q ss_pred eEEEEECCEEEEE----ecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCC
Q 042957 183 CVGVTWQGKIHVV----SGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLK 257 (371)
Q Consensus 183 ~~~~~~~~~lyv~----GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~ 257 (371)
..++.-+++||+. |.......... ........++.+|+. ++...+.... ....+++.. ++++++.....
T Consensus 119 ~i~~d~~G~l~vtd~~~g~~~~~~~~~~-~~~~~~~~l~~~~~~-g~~~~~~~~~---~~~~gi~~s~dg~~lv~~~~~- 192 (296)
T 3e5z_A 119 DVCLAPDGSLWFSDPTYGIDKPEEGYGG-EMELPGRWVFRLAPD-GTLSAPIRDR---VKPNGLAFLPSGNLLVSDTGD- 192 (296)
T ss_dssp CEEECTTSCEEEEECSHHHHCGGGSSCC-CCCSSSCEEEEECTT-SCEEEEECCC---SSEEEEEECTTSCEEEEETTT-
T ss_pred CEEECCCCCEEEECCccccccccccccc-cccCCCcEEEEECCC-CCEEEeecCC---CCCccEEECCCCCEEEEeCCC-
Confidence 2223346789886 32110000000 000012478889887 5544432111 111234433 45655554322
Q ss_pred CccCeEEEEeCC-CCce
Q 042957 258 AWKGHIESYDGE-LNMW 273 (371)
Q Consensus 258 ~~~~~~~~yd~~-~~~W 273 (371)
..+++||+. +.+.
T Consensus 193 ---~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 193 ---NATHRYCLNARGET 206 (296)
T ss_dssp ---TEEEEEEECSSSCE
T ss_pred ---CeEEEEEECCCCcC
Confidence 359999986 4454
No 176
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.19 E-value=1.9 Score=42.80 Aligned_cols=137 Identities=10% Similarity=-0.012 Sum_probs=65.6
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCce-eeEEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRY-KCVGV 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~-~~~~~ 186 (371)
..+.++|..+.+-...-.-............+++.++.|+.+ ..+.+||.....-..+.....++. ...++
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D--------~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD--------RTIKLWNTLGECKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT--------SCEEEECTTSCEEEEECSSTTSCSSCEEEE
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC--------CEEEEEECCCCcceeeccCCCCCCCcEEEE
Confidence 567888887765322110000111111112256666777765 357778865543222221111111 11222
Q ss_pred EE--CC--EEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccC
Q 042957 187 TW--QG--KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKG 261 (371)
Q Consensus 187 ~~--~~--~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~ 261 (371)
.. ++ .+++.|+.+ ..+.+||+.+.+-...- ..-.....+++.. ++++++.|+.+.
T Consensus 524 ~~~~~~~~~~l~s~s~d--------------~~v~vwd~~~~~~~~~~--~~h~~~v~~v~~spdg~~l~sg~~Dg---- 583 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWD--------------KTVKVWNLSNCKLRSTL--AGHTGYVSTVAVSPDGSLCASGGKDG---- 583 (694)
T ss_dssp EECSCSSSCEEEEEETT--------------SCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETTS----
T ss_pred EEeCCCCcceEEEEeCC--------------CeEEEEECCCCcEEEEE--cCCCCCEEEEEEeCCCCEEEEEeCCC----
Confidence 22 22 345555433 46888999876543221 1101111123332 567777777655
Q ss_pred eEEEEeCCCCc
Q 042957 262 HIESYDGELNM 272 (371)
Q Consensus 262 ~~~~yd~~~~~ 272 (371)
.+.+||+.+.+
T Consensus 584 ~i~iwd~~~~~ 594 (694)
T 3dm0_A 584 VVLLWDLAEGK 594 (694)
T ss_dssp BCEEEETTTTE
T ss_pred eEEEEECCCCc
Confidence 49999998764
No 177
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.17 E-value=2.8 Score=37.99 Aligned_cols=182 Identities=8% Similarity=0.015 Sum_probs=90.8
Q ss_pred ceEEEEECCCCeeeecC--CCCCCCCCee-EEE---ECCEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCCCCCC
Q 042957 108 AWVLRYNVKSNEWTRCA--PLSVPRYDFA-CTV---CDNKIYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPNMSTL 179 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~--~~~~~r~~~~-~~~---~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~ 179 (371)
..+..+|..+++-...- ..+....... ... .++.+++.|+.+ ..+.+||.... .-+.+..-...
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D--------~~v~~wd~~~~~~~~~~~~~h~~~ 251 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD--------TTVRLWDLRITSRAVRTYHGHEGD 251 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT--------SCEEEEETTTTCCCCEEECCCSSC
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC--------CeEEEEECCCCCcceEEECCcCCC
Confidence 45778888776543321 2222222211 111 266788888876 35888888632 11222111111
Q ss_pred ceeeEEEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCC----C-CCCeEEE-ECCEEEEE
Q 042957 180 RYKCVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLD----I-PPNQIVE-VDNRLFSS 252 (371)
Q Consensus 180 ~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~----~-~~~~~~~-~~~~iyv~ 252 (371)
. ..++. -+++.++.|+.+ ..+.+||+.+..-.......... . ...+++. .++++++.
T Consensus 252 v--~~v~~~p~~~~l~s~s~D--------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 315 (380)
T 3iz6_a 252 I--NSVKFFPDGQRFGTGSDD--------------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFA 315 (380)
T ss_dssp C--CEEEECTTSSEEEEECSS--------------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE
T ss_pred e--EEEEEecCCCeEEEEcCC--------------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEE
Confidence 1 12222 256677777644 46888999887543321111110 0 1122333 36777777
Q ss_pred cCCCCCccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceee
Q 042957 253 GDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMS 332 (371)
Q Consensus 253 GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 332 (371)
|+.+. .+.+||..+.+-...- ..+... ...+.......-+++.++.|+.+.
T Consensus 316 g~~dg----~i~vwd~~~~~~~~~~----~~~~~~------------h~~~v~~l~~s~dg~~l~sgs~D~--------- 366 (380)
T 3iz6_a 316 GYSNG----DCYVWDTLLAEMVLNL----GTLQNS------------HEGRISCLGLSSDGSALCTGSWDK--------- 366 (380)
T ss_dssp ECTTS----CEEEEETTTCCEEEEE----CCSCSS------------CCCCCCEEEECSSSSEEEEECTTS---------
T ss_pred EECCC----CEEEEECCCCceEEEE----ecccCC------------CCCceEEEEECCCCCEEEEeeCCC---------
Confidence 76554 4999998775543220 111111 001222222334678888888754
Q ss_pred EEEEeecccc
Q 042957 333 MVHIFDTAAK 342 (371)
Q Consensus 333 ~v~~~d~~~~ 342 (371)
.|.+|+.+..
T Consensus 367 ~i~iW~~~~~ 376 (380)
T 3iz6_a 367 NLKIWAFSGH 376 (380)
T ss_dssp CEEEEECCSS
T ss_pred CEEEEecCCC
Confidence 5677877653
No 178
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.12 E-value=3 Score=37.14 Aligned_cols=178 Identities=15% Similarity=0.112 Sum_probs=90.2
Q ss_pred eeEEeCCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCe
Q 042957 40 LASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNE 119 (371)
Q Consensus 40 ~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 119 (371)
+++-.-.-.+|+.+....... .....++...++.+|++|-. ..+++-.-...+
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~---~~~~~~i~~~~~~~~~~g~~------------------------g~i~~S~DgG~t 110 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHS---DYRFNSVSFQGNEGWIVGEP------------------------PIMLHTTDGGQS 110 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCC---CCEEEEEEEETTEEEEEEET------------------------TEEEEESSTTSS
T ss_pred EEEeCCCCCCCeECCCCCCCC---CccEEEEEecCCeEEEEECC------------------------CeEEEECCCCCC
Confidence 444433345799886421110 11233555557788887521 235543333578
Q ss_pred eeecCCCC-CCCCCeeEE-EECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-CCEEEEEe
Q 042957 120 WTRCAPLS-VPRYDFACT-VCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-QGKIHVVS 196 (371)
Q Consensus 120 W~~~~~~~-~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~~lyv~G 196 (371)
|+++.... .+-....++ .-++.+|+.|.. ..+++-+-.-.+|+.+....... -+.++.. +++++++|
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------g~v~~S~DgG~tW~~~~~~~~~~-~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMITNV---------GAIYRTKDSGKNWQALVQEAIGV-MRNLNRSPSGEYVAVS 180 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEETT---------CCEEEESSTTSSEEEEECSCCCC-EEEEEECTTSCEEEEE
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEeCC---------ccEEEEcCCCCCCEEeecCCCcc-eEEEEEcCCCcEEEEE
Confidence 99986432 222223333 346888887642 13555444556899886432222 2333333 56677665
Q ss_pred cccCCCCCCCCccccccCeeEEE-ECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCCCccCeEEEEeCC-CCce
Q 042957 197 GFAQRADSDGSVHFTERSSAEVY-DTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGHIESYDGE-LNMW 273 (371)
Q Consensus 197 G~~~~~~~~~~~~~~~~~~v~~y-d~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~yd~~-~~~W 273 (371)
- . ..++.- |..-.+|+.+.... ... ...++. -++++|+.+... .+++.+.. ..+|
T Consensus 181 ~-~--------------G~~~~S~d~gG~tW~~~~~~~-~~~-~~~~~~~~~g~~~~~~~~G-----~~~~s~~D~G~tW 238 (327)
T 2xbg_A 181 S-R--------------GSFYSTWEPGQTAWEPHNRTT-SRR-LHNMGFTPDGRLWMIVNGG-----KIAFSDPDNSENW 238 (327)
T ss_dssp T-T--------------SSEEEEECTTCSSCEEEECCS-SSC-EEEEEECTTSCEEEEETTT-----EEEEEETTEEEEE
T ss_pred C-C--------------CcEEEEeCCCCCceeECCCCC-CCc-cceeEECCCCCEEEEeCCc-----eEEEecCCCCCee
Confidence 2 1 123333 33357899885322 211 123333 356788775421 25554333 5679
Q ss_pred Eee
Q 042957 274 DEV 276 (371)
Q Consensus 274 ~~~ 276 (371)
+.+
T Consensus 239 ~~~ 241 (327)
T 2xbg_A 239 GEL 241 (327)
T ss_dssp CCC
T ss_pred Eec
Confidence 987
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.03 E-value=0.5 Score=41.87 Aligned_cols=143 Identities=13% Similarity=0.003 Sum_probs=74.6
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC-CCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL-PNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~~~~~~~ 185 (371)
..+++||+.+++...+.... ...-.+++. -++++|+...... .....+.+||+.+...+.+ ........-..+
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~----~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i 140 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF----KSTGGIFAATENGDNLQDIIEDLSTAYCIDDM 140 (333)
T ss_dssp CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS----SSCCEEEEECTTSCSCEEEECSSSSCCCEEEE
T ss_pred CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC----CCCceEEEEeCCCCEEEEEEccCccCCcccce
Confidence 56899999988876653211 111223333 2678888754321 1125789999988776532 221112211222
Q ss_pred EE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CC-EEEEEcCCCCCccCe
Q 042957 186 VT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DN-RLFSSGDCLKAWKGH 262 (371)
Q Consensus 186 ~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~ 262 (371)
+. -++++|+......... ....++++|+.+.+...+.... . ...+++.. ++ .||+..... ..
T Consensus 141 ~~d~~g~l~v~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~--~-~~~~i~~~~dg~~l~v~~~~~----~~ 205 (333)
T 2dg1_A 141 VFDSKGGFYFTDFRGYSTN--------PLGGVYYVSPDFRTVTPIIQNI--S-VANGIALSTDEKVLWVTETTA----NR 205 (333)
T ss_dssp EECTTSCEEEEECCCBTTB--------CCEEEEEECTTSCCEEEEEEEE--S-SEEEEEECTTSSEEEEEEGGG----TE
T ss_pred EECCCCCEEEEeccccccC--------CCceEEEEeCCCCEEEEeecCC--C-cccceEECCCCCEEEEEeCCC----Ce
Confidence 22 3678887653211100 1246889998877665543211 1 11233332 33 577764322 35
Q ss_pred EEEEeCCC
Q 042957 263 IESYDGEL 270 (371)
Q Consensus 263 ~~~yd~~~ 270 (371)
+++||+.+
T Consensus 206 i~~~d~~~ 213 (333)
T 2dg1_A 206 LHRIALED 213 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEecC
Confidence 89999864
No 180
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.98 E-value=2.1 Score=42.30 Aligned_cols=194 Identities=6% Similarity=-0.117 Sum_probs=99.0
Q ss_pred ccceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 37 SNWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 37 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
...++.+|..+.+-..+..... +......++.. +++..+++..+ .......++.+|+
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~~~~~~------------------~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEP----KEKFLTNLSWSPDENILYVAEVN------------------RAQNECKVNAYDA 291 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSC----TTCEEEEEEECTTSSEEEEEEEC------------------TTSCEEEEEEEET
T ss_pred eeEEEEEECCCCceEeeccCCC----CceeEeeEEEECCCCEEEEEEeC------------------CCCCeeEEEEEEC
Confidence 3668999998887555442210 11111233333 45534443332 1123467899999
Q ss_pred CCC-eeeecCCCCCCC----CCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE
Q 042957 116 KSN-EWTRCAPLSVPR----YDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW 188 (371)
Q Consensus 116 ~~~-~W~~~~~~~~~r----~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~ 188 (371)
.+. ..+.+....... .......- ++++++.+..++ ...++.+|......+.+..-...........-
T Consensus 292 ~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g------~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~sp 365 (706)
T 2z3z_A 292 ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG------WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDP 365 (706)
T ss_dssp TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS------SCEEEEEETTSCEEEECCCSSSCEEEEEEECT
T ss_pred CCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC------ccEEEEEECCCCEEEecCCCCeEEEeeeEEcC
Confidence 888 665543211111 11223333 777666655432 46788888766666666432222221111222
Q ss_pred C-CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEE
Q 042957 189 Q-GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESY 266 (371)
Q Consensus 189 ~-~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~y 266 (371)
+ +.||+.+..... ....++.+|+.+...+.+... . ....++.. +++.+++..........++++
T Consensus 366 dg~~l~~~~~~~~~----------~~~~l~~~d~~~~~~~~l~~~---~-~~~~~~~spdg~~l~~~~~~~~~p~~i~l~ 431 (706)
T 2z3z_A 366 KGTRLYFESTEASP----------LERHFYCIDIKGGKTKDLTPE---S-GMHRTQLSPDGSAIIDIFQSPTVPRKVTVT 431 (706)
T ss_dssp TSSEEEEEESSSCT----------TCBEEEEEETTCCCCEESCCS---S-SEEEEEECTTSSEEEEEEECSSCSCEEEEE
T ss_pred CCCEEEEEecCCCC----------ceEEEEEEEcCCCCceeccCC---C-ceEEEEECCCCCEEEEEecCCCCCcEEEEE
Confidence 3 456666543221 124788899988776555421 1 11223322 455555543322233469999
Q ss_pred eCCCCc
Q 042957 267 DGELNM 272 (371)
Q Consensus 267 d~~~~~ 272 (371)
|..+.+
T Consensus 432 d~~~~~ 437 (706)
T 2z3z_A 432 NIGKGS 437 (706)
T ss_dssp ESSSCE
T ss_pred ECCCCe
Confidence 998876
No 181
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.92 E-value=2.5 Score=40.59 Aligned_cols=103 Identities=15% Similarity=0.085 Sum_probs=57.6
Q ss_pred CEEEEEcCC-CCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE--EECCEEEEEecccCCCCCCCCccccccCee
Q 042957 140 NKIYVAGGK-SNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV--TWQGKIHVVSGFAQRADSDGSVHFTERSSA 216 (371)
Q Consensus 140 ~~lyv~GG~-~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v 216 (371)
++.++.|+. + ..+.+||..+..... ..+.........+ .-++++++.|+.+ ..+
T Consensus 456 ~~~l~~~~~~d--------~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d--------------g~i 512 (615)
T 1pgu_A 456 QNYVAVGLEEG--------NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM--------------GKI 512 (615)
T ss_dssp SSEEEEEETTT--------SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT--------------SCE
T ss_pred CCEEEEeecCC--------CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC--------------CeE
Confidence 556666665 4 358899998876542 2222111111222 2367777777643 468
Q ss_pred EEEECCCCceeecccccc-CCCCCCeEEEE-----------CCEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 217 EVYDTQAGKWDLVARMWQ-LDIPPNQIVEV-----------DNRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 217 ~~yd~~t~~W~~~~~~~~-~~~~~~~~~~~-----------~~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
.+||+.+.+-... +.. -......++.. ++++++.|+.+. .+.+||+.+.
T Consensus 513 ~iw~~~~~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg----~i~iw~~~~~ 573 (615)
T 1pgu_A 513 LLYDLQSREVKTS--RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT----NIFIYSVKRP 573 (615)
T ss_dssp EEEETTTTEEEEC--CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS----CEEEEESSCT
T ss_pred EEeeCCCCcceeE--eecCCCCceeEEEEcCccccccccccCCCEEEEEcCCC----cEEEEECCCC
Confidence 8999987654322 221 11111123332 577888877655 4999999875
No 182
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=93.76 E-value=2.3 Score=41.44 Aligned_cols=108 Identities=9% Similarity=-0.001 Sum_probs=58.3
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe-CCC--CC-CCcee--eEEEE-ECCEEEEEecccCCCCCCCCcccc
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP-LPN--MS-TLRYK--CVGVT-WQGKIHVVSGFAQRADSDGSVHFT 211 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~-~~~--~p-~~~~~--~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~ 211 (371)
++++++.|+.+ ..+.+||..+.+... +.. +. .+... ..++. -+++.++.|+.+
T Consensus 201 dg~~las~s~D--------~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D------------ 260 (611)
T 1nr0_A 201 DGSLFASTGGD--------GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD------------ 260 (611)
T ss_dssp TSSEEEEEETT--------SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT------------
T ss_pred CCCEEEEEECC--------CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC------------
Confidence 67788888776 358889987765432 211 00 01111 12222 256666666543
Q ss_pred ccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 212 ERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 212 ~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
..+.+||+.+.+....-............+..+++.++.++... .+..+|+.+..
T Consensus 261 --~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~----~i~~~~~~~~~ 315 (611)
T 1nr0_A 261 --KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG----FINFVNPELGS 315 (611)
T ss_dssp --SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTC----CEEEEETTTTE
T ss_pred --CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCC----cEEEEeCCCCC
Confidence 47889999987665432222111111122334555566655443 48888887765
No 183
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.70 E-value=2.9 Score=35.61 Aligned_cols=180 Identities=8% Similarity=-0.040 Sum_probs=96.4
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+.+||+....-..+.... ...-+.++.. ++.||+.-.. ...++++++
T Consensus 58 ~~I~~~~~~g~~~~~~~~~~------~~~p~~ia~d~~~~~lyv~d~~-----------------------~~~I~~~~~ 108 (267)
T 1npe_A 58 PSIGRASLHGGEPTTIIRQD------LGSPEGIALDHLGRTIFWTDSQ-----------------------LDRIEVAKM 108 (267)
T ss_dssp TEEEEEESSSCCCEEEECTT------CCCEEEEEEETTTTEEEEEETT-----------------------TTEEEEEET
T ss_pred CEEEEEecCCCCcEEEEECC------CCCccEEEEEecCCeEEEEECC-----------------------CCEEEEEEc
Confidence 46788887665432221111 0122356654 5789988433 356888888
Q ss_pred CCCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE--CCE
Q 042957 116 KSNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW--QGK 191 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~--~~~ 191 (371)
....-+.+...... .-..+++. +++||+..... ....++++++....-+.+..... ..-..++.. ++.
T Consensus 109 ~g~~~~~~~~~~~~-~P~~i~vd~~~g~lyv~~~~~------~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~ 180 (267)
T 1npe_A 109 DGTQRRVLFDTGLV-NPRGIVTDPVRGNLYWTDWNR------DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQ 180 (267)
T ss_dssp TSCSCEEEECSSCS-SEEEEEEETTTTEEEEEECCS------SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTE
T ss_pred CCCCEEEEEECCCC-CccEEEEeeCCCEEEEEECCC------CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCE
Confidence 65433322211111 11234443 68999984321 13578888876543333322111 112233332 578
Q ss_pred EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 192 IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 192 lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
||+.... .+.+.++|+....-..+.. .. ....+++..++.||+..... +.+.++|+++.
T Consensus 181 lyv~d~~--------------~~~I~~~~~~g~~~~~~~~--~~-~~P~gi~~d~~~lyva~~~~----~~v~~~d~~~g 239 (267)
T 1npe_A 181 LCWVDAG--------------THRAECLNPAQPGRRKVLE--GL-QYPFAVTSYGKNLYYTDWKT----NSVIAMDLAIS 239 (267)
T ss_dssp EEEEETT--------------TTEEEEEETTEEEEEEEEE--CC-CSEEEEEEETTEEEEEETTT----TEEEEEETTTT
T ss_pred EEEEECC--------------CCEEEEEecCCCceEEEec--CC-CCceEEEEeCCEEEEEECCC----CeEEEEeCCCC
Confidence 9988732 2578999987643322221 11 11235677789999975433 35999999876
Q ss_pred ceEe
Q 042957 272 MWDE 275 (371)
Q Consensus 272 ~W~~ 275 (371)
+-..
T Consensus 240 ~~~~ 243 (267)
T 1npe_A 240 KEMD 243 (267)
T ss_dssp EEEE
T ss_pred CceE
Confidence 5443
No 184
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.63 E-value=3.3 Score=35.93 Aligned_cols=64 Identities=13% Similarity=0.192 Sum_probs=34.3
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCC-------ceEeCCCCCCCcee-eEEEEE-C--CEEEEEecccCCCCCCCCc
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELD-------QWTPLPNMSTLRYK-CVGVTW-Q--GKIHVVSGFAQRADSDGSV 208 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~-------~W~~~~~~p~~~~~-~~~~~~-~--~~lyv~GG~~~~~~~~~~~ 208 (371)
+.+++.|+.+ ..+.+||..+. .|+.+..+...... ..++.. + +.+++.|+.+
T Consensus 71 ~~~l~s~~~d--------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------- 133 (351)
T 3f3f_A 71 GRIIASASYD--------KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND--------- 133 (351)
T ss_dssp CSEEEEEETT--------SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---------
T ss_pred CCEEEEEcCC--------CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC---------
Confidence 6777777775 35777887654 23333322211111 122222 3 5566666533
Q ss_pred cccccCeeEEEECCCCc
Q 042957 209 HFTERSSAEVYDTQAGK 225 (371)
Q Consensus 209 ~~~~~~~v~~yd~~t~~ 225 (371)
..+.+||+.+.+
T Consensus 134 -----g~v~iwd~~~~~ 145 (351)
T 3f3f_A 134 -----GILRLYDALEPS 145 (351)
T ss_dssp -----CEEEEEECSSTT
T ss_pred -----CcEEEecCCChH
Confidence 468889987654
No 185
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.63 E-value=3.2 Score=35.80 Aligned_cols=137 Identities=11% Similarity=0.046 Sum_probs=68.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
+.+..||..+++..+.-.... |...-.+++.. +++.++.|+.+ ..+..+|..
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~----~~~~V~~v~~~~~~~~l~sgs~D-----------------------g~v~iw~~~ 97 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQ----PGEYISSVAWIKEGNYLAVGTSS-----------------------AEVQLWDVQ 97 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCS----TTCCEEEEEECTTSSEEEEEETT-----------------------SEEEEEETT
T ss_pred CEEEEEECCCCCEEEEEEecC----CCCeEEEEEECCCCCEEEEEECC-----------------------CcEEEeecC
Confidence 458899999987655433221 22222344444 46677777764 567888888
Q ss_pred CCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC-CCCCceeeEEEEECCEEEEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN-MSTLRYKCVGVTWQGKIHVV 195 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~-~p~~~~~~~~~~~~~~lyv~ 195 (371)
+++-...-.. ..........++.+++.|+.+ ..+..++..+........ -............++++++.
T Consensus 98 ~~~~~~~~~~--h~~~~~~~~~~~~~l~s~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 167 (318)
T 4ggc_A 98 QQKRLRNMTS--HSARVGSLSWNSYILSSGSRS--------GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLAS 167 (318)
T ss_dssp TTEEEEEEEC--CSSCEEEEEEETTEEEEEETT--------SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CceeEEEecC--ccceEEEeecCCCEEEEEecC--------CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEE
Confidence 7764332111 112223334455566666554 234555554433221110 01111111112234555556
Q ss_pred ecccCCCCCCCCccccccCeeEEEECCCCc
Q 042957 196 SGFAQRADSDGSVHFTERSSAEVYDTQAGK 225 (371)
Q Consensus 196 GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~ 225 (371)
++.+ ..+.+||..+.+
T Consensus 168 ~~~d--------------~~i~iwd~~~~~ 183 (318)
T 4ggc_A 168 GGND--------------NLVNVWPSAPGE 183 (318)
T ss_dssp EETT--------------SCEEEEESSCBT
T ss_pred EecC--------------cceeEEECCCCc
Confidence 5433 467889987654
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.62 E-value=1.7 Score=42.71 Aligned_cols=148 Identities=13% Similarity=-0.026 Sum_probs=83.5
Q ss_pred cceEEEEECC-CC---eeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCce-
Q 042957 107 LAWVLRYNVK-SN---EWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRY- 181 (371)
Q Consensus 107 ~~~v~~yd~~-~~---~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~- 181 (371)
..+++++|.. ++ +.+.+..-...........-++++|+.+..++ ...++.+|..+.+++.+.+......
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~~~~l~~~~~~~~~ 289 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTG------WWNLHRVDPATGAATQLCRREEEFAG 289 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTS------SCEEEEECTTTCCEEESSCCSSBSSC
T ss_pred CcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCC------CeEEEEEECCCCceeecccccccccC
Confidence 3579999998 56 44443321111111122223677777765542 3479999998888988754322110
Q ss_pred ------eeEEEEE-CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeE-EEECCEEEEEc
Q 042957 182 ------KCVGVTW-QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQI-VEVDNRLFSSG 253 (371)
Q Consensus 182 ------~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~-~~~~~~iyv~G 253 (371)
....+.. ++++++.+.. +. ..++.+|+.+...+.+.... . ....+ ...++.+++..
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~-~~------------~~l~~~d~~~~~~~~l~~~~-~--~~~~~~s~~~~~~~~~~ 353 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGK-GA------------AVLGILDPESGELVDAAGPW-T--EWAATLTVSGTRAVGVA 353 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBS-SS------------CEEEEEETTTTEEEECCSSC-C--EEEEEEEEETTEEEEEE
T ss_pred ccccccCceEeEeCCCEEEEEEEc-Cc------------cEEEEEECCCCcEEEecCCC-C--eEEEEEecCCCEEEEEE
Confidence 1122333 6777766654 21 46788899888766653221 1 11123 44566776664
Q ss_pred CCCCCccCeEEEEeCCCCceEeec
Q 042957 254 DCLKAWKGHIESYDGELNMWDEVN 277 (371)
Q Consensus 254 G~~~~~~~~~~~yd~~~~~W~~~~ 277 (371)
+... ....++.+|+.+.+.+.+.
T Consensus 354 ~~~~-~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 354 ASPR-TAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EETT-EEEEEEEEETTTCCEEEEE
T ss_pred cCCC-CCCEEEEEECCCCceEEee
Confidence 4321 2246899999998888873
No 187
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.59 E-value=6.3 Score=39.04 Aligned_cols=118 Identities=15% Similarity=0.247 Sum_probs=69.6
Q ss_pred EEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCe--eeecCCCCCC--------CCCeeEEEEC
Q 042957 70 IVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNE--WTRCAPLSVP--------RYDFACTVCD 139 (371)
Q Consensus 70 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~ 139 (371)
-++.++.||+.... ..++.+|..+.+ |+.-...+.. ....+.++.+
T Consensus 62 P~v~~g~vyv~~~~------------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (668)
T 1kv9_A 62 PLFHDGVIYTSMSW------------------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWG 117 (668)
T ss_dssp CEEETTEEEEEEGG------------------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEB
T ss_pred CEEECCEEEEECCC------------------------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEEC
Confidence 45678999988542 458888887764 8764332211 1123456678
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCCCCC--CceeeEEEEECCEEEEEecccCCCCCCCCccccccCe
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPNMST--LRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSS 215 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~--~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 215 (371)
++||+.... ..+..+|.++. .|+.-..-+. .....+.++.+++||+..+..... ....
T Consensus 118 ~~v~v~~~d---------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~---------~~g~ 179 (668)
T 1kv9_A 118 DKVYVGTLD---------GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYG---------VRGF 179 (668)
T ss_dssp TEEEEECTT---------SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTC---------CBCE
T ss_pred CEEEEEcCC---------CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcC---------CCCE
Confidence 999876321 46899999876 4876432111 112223356788888743321111 2257
Q ss_pred eEEEECCCCc--eeec
Q 042957 216 AEVYDTQAGK--WDLV 229 (371)
Q Consensus 216 v~~yd~~t~~--W~~~ 229 (371)
+..||.++++ |+.-
T Consensus 180 v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 180 VSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEETTTCCEEEEEE
T ss_pred EEEEECCCCcEEEEec
Confidence 8999998875 7653
No 188
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.52 E-value=1.9 Score=38.83 Aligned_cols=156 Identities=8% Similarity=-0.085 Sum_probs=77.5
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCc-eeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLR-YKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~-~~~~~ 185 (371)
..++++|+.+++-+.+.... ....+....- +++.+++..... .......++.+|......+.+....... .....
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp~dg~~l~~~~~~~--~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQEN-QWLGHPIYRPYDDSTVAFCHEGP--HDLVDARMWLINEDGTNMRKVKTHAEGESCTHEF 244 (388)
T ss_dssp EEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSC--TTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEE
T ss_pred ceEEEEECCCCceEEeecCC-ccccccEECCCCCCEEEEEEecC--CCCCcceEEEEeCCCCceEEeeeCCCCcccccce
Confidence 67899999888765553221 1222333333 455444432221 1122457999999887777765433221 11112
Q ss_pred EEECCE-EEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccC-----CCCCCeEEEECCEEEEEcC----C
Q 042957 186 VTWQGK-IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQL-----DIPPNQIVEVDNRLFSSGD----C 255 (371)
Q Consensus 186 ~~~~~~-lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~-----~~~~~~~~~~~~~iyv~GG----~ 255 (371)
..-+++ |+......+.. ...++++|+++.+-+.+...+.. ........--+..|++... .
T Consensus 245 ~spdg~~l~~~~~~~~~~----------~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 314 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSP----------DRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGY 314 (388)
T ss_dssp ECTTSSCEEEEEEETTCC----------CEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC----------
T ss_pred ECCCCCEEEEEecCCCCC----------cceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeecccc
Confidence 223555 54443222211 12589999999887666444320 0011122233444443311 1
Q ss_pred CCCccCeEEEEeCCCCceEee
Q 042957 256 LKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 256 ~~~~~~~~~~yd~~~~~W~~~ 276 (371)
.......++++|+++.+-+.+
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~l 335 (388)
T 3pe7_A 315 KIENDPFLYVFNMKNGTQHRV 335 (388)
T ss_dssp --CCCCEEEEEETTTTEEEEE
T ss_pred ccCCCCEEEEEeccCCceEEe
Confidence 112234699999999887777
No 189
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.52 E-value=3.3 Score=37.45 Aligned_cols=136 Identities=12% Similarity=0.114 Sum_probs=65.4
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCC-----Ccee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMST-----LRYK 182 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-----~~~~ 182 (371)
..+..+|..+.+-...-..........+..-+++.++.||.+. .+.+||..+..-... .++. +...
T Consensus 88 ~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~--------~v~iw~~~~~~~~~~-~~~~~~~~~gh~~ 158 (380)
T 3iz6_a 88 GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDS--------ACSIFNLSSQADRDG-NMPVSRVLTGHKG 158 (380)
T ss_dssp SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSS--------CCEEEECCCCSSCCC-SSTTCCBCCCCSS
T ss_pred CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCC--------cEEEEECCCCccccC-CccceeeccCCCc
Confidence 4677788777654332111112222223334677888888763 466777755321110 1111 1111
Q ss_pred e--EEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccc--cccCCCCCC-eEEE--ECCEEEEEc
Q 042957 183 C--VGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVAR--MWQLDIPPN-QIVE--VDNRLFSSG 253 (371)
Q Consensus 183 ~--~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~--~~~~~~~~~-~~~~--~~~~iyv~G 253 (371)
. .+... ++..++.|+.+ ..+.+||+.+.+-...-. .+....... .+.. .++.+++.|
T Consensus 159 ~v~~~~~~~~~~~~l~s~s~D--------------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 224 (380)
T 3iz6_a 159 YASSCQYVPDQETRLITGSGD--------------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISG 224 (380)
T ss_dssp CCCCCBCCSSSSSCEEEECTT--------------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEE
T ss_pred ceEEEEEecCCCCEEEEECCC--------------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEE
Confidence 0 11111 23344455432 468889998876443221 111111111 1222 156788888
Q ss_pred CCCCCccCeEEEEeCCC
Q 042957 254 DCLKAWKGHIESYDGEL 270 (371)
Q Consensus 254 G~~~~~~~~~~~yd~~~ 270 (371)
+.+. .+.+||+..
T Consensus 225 s~D~----~v~~wd~~~ 237 (380)
T 3iz6_a 225 SCDT----TVRLWDLRI 237 (380)
T ss_dssp ETTS----CEEEEETTT
T ss_pred ECCC----eEEEEECCC
Confidence 7665 499999863
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.34 E-value=1 Score=40.55 Aligned_cols=159 Identities=11% Similarity=-0.020 Sum_probs=77.0
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCe--eEEEECCE-EEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDF--ACTVCDNK-IYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCV 184 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~--~~~~~~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~ 184 (371)
..++.+|....+++.+.. ..+.... ....-+++ |++.+-... .....++++|..+.+.+.+..++. .. .
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~----~~~~~l~~~d~~~g~~~~l~~~~~--~~-~ 287 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKG----QTDRVIYKANPETLENEEVMVMPP--CS-H 287 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETT----TCCEEEEEECTTTCCEEEEEECCS--EE-E
T ss_pred ceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCC----CccceEEEEECCCCCeEEeeeCCC--CC-C
Confidence 578999998888777654 2111111 12222454 444422111 112459999999888776654442 22 2
Q ss_pred EEEE-CCEEEEEecccCCCCCCC--CccccccCeeEEEECCCCceeeccccccCC---------CCCCeEEEECC-EEEE
Q 042957 185 GVTW-QGKIHVVSGFAQRADSDG--SVHFTERSSAEVYDTQAGKWDLVARMWQLD---------IPPNQIVEVDN-RLFS 251 (371)
Q Consensus 185 ~~~~-~~~lyv~GG~~~~~~~~~--~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~---------~~~~~~~~~~~-~iyv 251 (371)
...- +++++++.+......... .........++.+|+.+.+...+....... ........-++ .|++
T Consensus 288 ~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 367 (396)
T 3c5m_A 288 LMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLF 367 (396)
T ss_dssp EEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEE
T ss_pred CccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEE
Confidence 2334 677666654220000000 000001257899999988766554322210 01111122244 4555
Q ss_pred EcCCCCCccCeEEEEeCCCCceEee
Q 042957 252 SGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 252 ~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
...... ...++.+|+.+..++.+
T Consensus 368 ~s~~~~--~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 368 TSDFEG--VPAIYIADVPESYKHLE 390 (396)
T ss_dssp EECTTS--SCEEEEEECCTTCC---
T ss_pred EecCCC--CceEEEEEEcccccccc
Confidence 443222 24699999988887776
No 191
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.26 E-value=4.8 Score=36.71 Aligned_cols=182 Identities=12% Similarity=0.077 Sum_probs=97.1
Q ss_pred eeEEeCCC--CceeccCCCCcccccccccceEEEEE---CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEE
Q 042957 40 LASYNPSN--NTWSHVSHIPDLLENHVLKGFSIVSL---GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYN 114 (371)
Q Consensus 40 ~~~yd~~~--~~W~~~~~~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 114 (371)
++.++... .+|..+..... ...-++++.. .+.||+.+... ..-..+++.+
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~-----~~~v~~i~~dp~~~~~l~~g~~~g--------------------~~g~gl~~s~ 87 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFL-----GHTIHHIVQDPREPERMLMAARTG--------------------HLGPTVFRSD 87 (394)
T ss_dssp EEEEEECTTSCSEEEEEEEST-----TSEEEEEEECSSSTTCEEEEEEC----------------------CCEEEEEES
T ss_pred eEEEECCCCCCCceECCccCC-----CCceEEEEECCCCCCeEEEEecCC--------------------CCCccEEEeC
Confidence 56677654 78987642110 0123355554 46788765321 0112578877
Q ss_pred CCCCeeeecCCC---CCC--C-----CCe--eEEEE----CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCC--
Q 042957 115 VKSNEWTRCAPL---SVP--R-----YDF--ACTVC----DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNM-- 176 (371)
Q Consensus 115 ~~~~~W~~~~~~---~~~--r-----~~~--~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~-- 176 (371)
-...+|+++... +.. + ... +++.. .+.||+.+.. ..+++.+....+|+.+..+
T Consensus 88 D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~---------ggl~~S~DgG~tW~~~~~~~~ 158 (394)
T 3b7f_A 88 DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP---------QGLFRSTDHGASWEPVAGFND 158 (394)
T ss_dssp STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEET---------TEEEEESSTTSBCEECHHHHT
T ss_pred CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecC---------CcEEEEcCCCCCeEECcCccC
Confidence 777899987632 211 1 111 23332 4677765321 3478887788899987532
Q ss_pred -CC--------------CceeeEEEEE---CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecccc------
Q 042957 177 -ST--------------LRYKCVGVTW---QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARM------ 232 (371)
Q Consensus 177 -p~--------------~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~------ 232 (371)
|. ....+.+++. .+.||+.... ..+++.+-...+|+.+...
T Consensus 159 ~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~---------------ggl~~s~DgG~tW~~~~~~~~~~~~ 223 (394)
T 3b7f_A 159 HPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS---------------GGVFESTDAGTDWKPLNRGCAANFL 223 (394)
T ss_dssp CTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET---------------BEEEEESSTTSSCEECCTTCCCTTS
T ss_pred CccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC---------------CCEEEECCCCCCceECCCCcccccc
Confidence 21 1112233332 3567775421 2466676677889887531
Q ss_pred ccCC----CCCCeEEEEC---CEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 233 WQLD----IPPNQIVEVD---NRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 233 ~~~~----~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
|... ...+.++... +.||+-.. ..+++.+-...+|+.+
T Consensus 224 p~~~~~~g~~~~~i~~~~~~~~~l~vg~~------~gl~~s~D~G~tW~~~ 268 (394)
T 3b7f_A 224 PDPNVEFGHDPHCVVQHPAAPDILYQQNH------CGIYRMDRREGVWKRI 268 (394)
T ss_dssp SSSSSSSCBCEEEEEECSSSTTEEEEEET------TEEEEEETTTTEEECG
T ss_pred CCCccccCcceeEEEECCCCCCEEEEEcC------CeEEEeCCCCCcceEC
Confidence 1110 0112333322 56776421 2488888888999998
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=93.18 E-value=7.3 Score=38.63 Aligned_cols=208 Identities=9% Similarity=-0.068 Sum_probs=100.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+++.+.....|+.+-+.......+.....+.+.. +++..+++... .......++++|..
T Consensus 98 ~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~------------------~G~~~~~i~v~d~~ 159 (710)
T 2xdw_A 98 RVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA------------------SGSDWVTIKFMKVD 159 (710)
T ss_dssp CEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE------------------TTCSCEEEEEEETT
T ss_pred EEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC------------------CCCceEEEEEEECC
Confidence 457788777777776533221111111111122222 55555554322 11123479999999
Q ss_pred CCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCC--------CCCCCceEEEEeCCCCceE--eCCCCC-CCceeeEE
Q 042957 117 SNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLF--------SAKGTASAEVYHPELDQWT--PLPNMS-TLRYKCVG 185 (371)
Q Consensus 117 ~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~--------~~~~~~~~~~yd~~t~~W~--~~~~~p-~~~~~~~~ 185 (371)
+++...... ........+..-+++.++++..+... .......+++++..+.+.+ .+-..+ ........
T Consensus 160 tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 160 GAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 998765321 11111112222255444444332110 0122456889998877632 221212 12222222
Q ss_pred -EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCC------C--ceeeccccccCCCCCCeEEEECCEEEEEcCCC
Q 042957 186 -VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQA------G--KWDLVARMWQLDIPPNQIVEVDNRLFSSGDCL 256 (371)
Q Consensus 186 -~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t------~--~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~ 256 (371)
..-+++..++....... ....++.+|+.+ . .+..+....... ...+...+++||+.....
T Consensus 239 ~~SpDg~~l~~~~~~~~~---------~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCD---------PVNRLWYCDLQQESNGITGILKWVKLIDNFEGE--YDYVTNEGTVFTFKTNRH 307 (710)
T ss_dssp EECTTSCEEEEEEECSSS---------SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC--EEEEEEETTEEEEEECTT
T ss_pred EEcCCCCEEEEEEEccCC---------CccEEEEEECcccccccCCccceEEeeCCCCcE--EEEEeccCCEEEEEECCC
Confidence 23355544444332211 125788999876 4 566664322111 112334577888886532
Q ss_pred CCccCeEEEEeCCCC---ceEee
Q 042957 257 KAWKGHIESYDGELN---MWDEV 276 (371)
Q Consensus 257 ~~~~~~~~~yd~~~~---~W~~~ 276 (371)
.....++++|+.+. .|+.+
T Consensus 308 -~~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 308 -SPNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp -CTTCEEEEEETTSCCGGGCEEE
T ss_pred -CCCCEEEEEeCCCCCcccceec
Confidence 12346999999875 58887
No 193
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.17 E-value=3.7 Score=36.38 Aligned_cols=62 Identities=3% Similarity=-0.006 Sum_probs=33.4
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe-CCCCCCCceeeEEEE-ECCEEEEEecccCCCCCCCCccccccCee
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP-LPNMSTLRYKCVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSA 216 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v 216 (371)
++.+++.|+.+ ..+.+||..+.+... +..-.... ..++. -+++.++.|+.+ ..+
T Consensus 87 ~~~~l~s~s~D--------~~v~lwd~~~~~~~~~~~~h~~~v--~~v~~sp~~~~l~s~~~d--------------~~i 142 (343)
T 2xzm_R 87 ENCFAISSSWD--------KTLRLWDLRTGTTYKRFVGHQSEV--YSVAFSPDNRQILSAGAE--------------REI 142 (343)
T ss_dssp STTEEEEEETT--------SEEEEEETTSSCEEEEEECCCSCE--EEEEECSSTTEEEEEETT--------------SCE
T ss_pred CCCEEEEEcCC--------CcEEEEECCCCcEEEEEcCCCCcE--EEEEECCCCCEEEEEcCC--------------CEE
Confidence 55666677765 468889988765422 21111111 12222 255555666533 467
Q ss_pred EEEECCCC
Q 042957 217 EVYDTQAG 224 (371)
Q Consensus 217 ~~yd~~t~ 224 (371)
.+||....
T Consensus 143 ~~wd~~~~ 150 (343)
T 2xzm_R 143 KLWNILGE 150 (343)
T ss_dssp EEEESSSC
T ss_pred EEEeccCC
Confidence 88888644
No 194
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.13 E-value=4.6 Score=36.16 Aligned_cols=158 Identities=5% Similarity=-0.199 Sum_probs=77.6
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE-
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV- 186 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~- 186 (371)
..+|.+|+.+.+-.++...+..........-+++.+++...+ ..++++|+.+.+-+.+...+.........
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~--------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~ 131 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG--------RNLMRVDLATLEENVVYQVPAEWVGYGTWV 131 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT--------TEEEEEETTTCCEEEEEECCTTEEEEEEEE
T ss_pred ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC--------CeEEEEECCCCcceeeeechhhccccccee
Confidence 479999999998877765443322222233355434443321 36899999988766655555443222211
Q ss_pred -EECCEEEEEecccCC-CCCCCC-------ccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCC
Q 042957 187 -TWQGKIHVVSGFAQR-ADSDGS-------VHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDC 255 (371)
Q Consensus 187 -~~~~~lyv~GG~~~~-~~~~~~-------~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~ 255 (371)
.-++++++.--.... ...... ........++.+|+.+.+-+.+..... .. ..+... +++.+++...
T Consensus 132 ~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 132 ANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ--WL-GHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS--CE-EEEEEETTEEEEEEEEEC
T ss_pred ECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc--cc-cccEECCCCCCEEEEEEe
Confidence 224443332110000 000000 000022578999999887655542221 11 122222 3443333222
Q ss_pred C--CCccCeEEEEeCCCCceEee
Q 042957 256 L--KAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 256 ~--~~~~~~~~~yd~~~~~W~~~ 276 (371)
. ......++.+|++....+.+
T Consensus 209 ~~~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 209 GPHDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp SCTTTSSCSEEEEETTSCCCEES
T ss_pred cCCCCCcceEEEEeCCCCceEEe
Confidence 1 11234799999988777666
No 195
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.09 E-value=4.4 Score=35.84 Aligned_cols=182 Identities=11% Similarity=-0.020 Sum_probs=88.8
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEE-ECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVS-LGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
..+++||+.+++...+. .+. .-.+++. -++++|+.. . ..+++||+.
T Consensus 71 ~~i~~~d~~~~~~~~~~-~~~-------~v~~i~~~~dg~l~v~~-~------------------------~gl~~~d~~ 117 (326)
T 2ghs_A 71 RELHELHLASGRKTVHA-LPF-------MGSALAKISDSKQLIAS-D------------------------DGLFLRDTA 117 (326)
T ss_dssp TEEEEEETTTTEEEEEE-CSS-------CEEEEEEEETTEEEEEE-T------------------------TEEEEEETT
T ss_pred CEEEEEECCCCcEEEEE-CCC-------cceEEEEeCCCeEEEEE-C------------------------CCEEEEECC
Confidence 45889999887655432 221 1123333 367877753 1 238999998
Q ss_pred CCeeeecCCCCCC----CCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEE-CC-
Q 042957 117 SNEWTRCAPLSVP----RYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTW-QG- 190 (371)
Q Consensus 117 ~~~W~~~~~~~~~----r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~-~~- 190 (371)
+++.+.+...... +.....+.-++++|+...... .......++++| +.+.+.+.. .... ....+.. ++
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~--~~~~~~~l~~~~--~g~~~~~~~-~~~~-~~~i~~s~dg~ 191 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK--AETGAGSIYHVA--KGKVTKLFA-DISI-PNSICFSPDGT 191 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT--CCTTCEEEEEEE--TTEEEEEEE-EESS-EEEEEECTTSC
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc--CCCCceEEEEEe--CCcEEEeeC-CCcc-cCCeEEcCCCC
Confidence 8888766443221 111122222577776431110 112345788888 455544321 0011 1122222 44
Q ss_pred EEEEEecccCCCCCCCCccccccCeeEEEECC--CC-ceee---ccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeE
Q 042957 191 KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQ--AG-KWDL---VARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHI 263 (371)
Q Consensus 191 ~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~--t~-~W~~---~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~ 263 (371)
.||+.... ...+++||.. +. .... +..+........+++.. ++.||+..... ..+
T Consensus 192 ~lyv~~~~--------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~----~~v 253 (326)
T 2ghs_A 192 TGYFVDTK--------------VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE----GAV 253 (326)
T ss_dssp EEEEEETT--------------TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT----TEE
T ss_pred EEEEEECC--------------CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC----CEE
Confidence 57776521 1478888875 44 3211 11111111111233332 56777764211 259
Q ss_pred EEEeCCCCceEee
Q 042957 264 ESYDGELNMWDEV 276 (371)
Q Consensus 264 ~~yd~~~~~W~~~ 276 (371)
.+||+....-..+
T Consensus 254 ~~~d~~g~~~~~i 266 (326)
T 2ghs_A 254 DRYDTDGNHIARY 266 (326)
T ss_dssp EEECTTCCEEEEE
T ss_pred EEECCCCCEEEEE
Confidence 9999965544444
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=93.06 E-value=6.9 Score=37.96 Aligned_cols=196 Identities=11% Similarity=0.067 Sum_probs=101.3
Q ss_pred cceEEEEECCCCeeeecCCCCCCCCCeeEEEE-CC-EEEEEcCCCCCCCCCCCceEEEEeCCCCceEe---C-CCCCCCc
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVPRYDFACTVC-DN-KIYVAGGKSNLFSAKGTASAEVYHPELDQWTP---L-PNMSTLR 180 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~---~-~~~p~~~ 180 (371)
...++..|....+...+..++..+.-|..... ++ ++|+.... .+.+.++|.++++-.. + ...|.+.
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~--------sn~V~ViD~~t~kl~~~i~vgg~~Phpg 390 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA--------RNKLVVIDTKEGKLVAIEDTGGQTPHPG 390 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG--------GTEEEEEETTTTEEEEEEECSSSSBCCT
T ss_pred CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC--------CCeEEEEECCCCcEEEEEeccCcCCCCc
Confidence 56788888877655444444444444444332 34 45554322 3679999999875432 2 2334432
Q ss_pred eeeEEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc-----eeeccccccCCCCCCeEEEE--CCEEEE
Q 042957 181 YKCVGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK-----WDLVARMWQLDIPPNQIVEV--DNRLFS 251 (371)
Q Consensus 181 ~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~-----W~~~~~~~~~~~~~~~~~~~--~~~iyv 251 (371)
.+.. ... .+.+|+.+-... ..|.++|..+.. |+.+..++........+... +..+|+
T Consensus 391 ~g~~-~~~p~~g~v~~t~~~g~-------------~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v 456 (567)
T 1qks_A 391 RGAN-FVHPTFGPVWATSHMGD-------------DSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYV 456 (567)
T ss_dssp TCEE-EEETTTEEEEEEEBSSS-------------SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEE
T ss_pred ccee-eECCCCCcEEEeCCCCC-------------CeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEE
Confidence 2222 233 356777662221 467888877633 88887665433221123333 347888
Q ss_pred EcCCCC--CccCeEEEEeCCCC-------ceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeee-CCeEEEEcce
Q 042957 252 SGDCLK--AWKGHIESYDGELN-------MWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPI-GTHLYFLAGY 321 (371)
Q Consensus 252 ~GG~~~--~~~~~~~~yd~~~~-------~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~ 321 (371)
--..+. ...+.+.+||..+. .++.+.-..+..++.+ ..|..|....- ++++|+.-+.
T Consensus 457 ~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~G~~~~~s~~~ 523 (567)
T 1qks_A 457 DATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEG-------------QPRVVQGEFNKDGTEVWFSVWN 523 (567)
T ss_dssp ECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSS-------------CCEEEEEEECTTSSEEEEEEEC
T ss_pred ecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCC-------------CcceEeeeECCCCCEEEEEeec
Confidence 542111 12357999999865 2344411111123211 12444443333 5588886321
Q ss_pred eecccccceeeEEEEeecccc
Q 042957 322 RMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 322 ~~~~~~~~~~~~v~~~d~~~~ 342 (371)
.. ...+.|.++|.++.
T Consensus 524 ~~-----~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 524 GK-----DQESALVVVDDKTL 539 (567)
T ss_dssp CT-----TSCCEEEEEETTTT
T ss_pred CC-----CCCCcEEEEECCCc
Confidence 10 23467888998854
No 197
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.00 E-value=4.3 Score=35.41 Aligned_cols=127 Identities=14% Similarity=0.234 Sum_probs=61.3
Q ss_pred ceEEEEECCCC-eeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCC-CceEeCCCCCCCceeeE
Q 042957 108 AWVLRYNVKSN-EWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPEL-DQWTPLPNMSTLRYKCV 184 (371)
Q Consensus 108 ~~v~~yd~~~~-~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~W~~~~~~p~~~~~~~ 184 (371)
..++.||+... .|..-.. ... ..+.+. .++.||+.. ..+++||... ..|+..... .... +
T Consensus 157 ~~l~~~d~~g~~~~~~~~~--~~~-~~~~~~d~~g~l~v~t-----------~~l~~~d~~g~~~~~~~~~~--~~~~-~ 219 (330)
T 3hxj_A 157 NYLYAINPDGTEKWRFKTN--DAI-TSAASIGKDGTIYFGS-----------DKVYAINPDGTEKWNFYAGY--WTVT-R 219 (330)
T ss_dssp SEEEEECTTSCEEEEEECS--SCC-CSCCEECTTCCEEEES-----------SSEEEECTTSCEEEEECCSS--CCCS-C
T ss_pred CEEEEECCCCCEeEEEecC--CCc-eeeeEEcCCCEEEEEe-----------CEEEEECCCCcEEEEEccCC--ccee-c
Confidence 45788888722 2544321 111 122233 367777764 2377888332 246554321 1111 2
Q ss_pred EEEE-CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc-eeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccC
Q 042957 185 GVTW-QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK-WDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKG 261 (371)
Q Consensus 185 ~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~ 261 (371)
.+.. ++.||+... ...+.+||+.... |..... .. . ...++.. ++.||+... . .
T Consensus 220 ~~~~~~g~l~v~t~---------------~~gl~~~~~~g~~~~~~~~~--~~-~-~~~~~~~~~g~l~v~t~-~----g 275 (330)
T 3hxj_A 220 PAISEDGTIYVTSL---------------DGHLYAINPDGTEKWRFKTG--KR-I-ESSPVIGNTDTIYFGSY-D----G 275 (330)
T ss_dssp CEECTTSCEEEEET---------------TTEEEEECTTSCEEEEEECS--SC-C-CSCCEECTTSCEEEECT-T----C
T ss_pred eEECCCCeEEEEcC---------------CCeEEEECCCCCEeEEeeCC--CC-c-cccceEcCCCeEEEecC-C----C
Confidence 2233 457887541 1467778765443 443221 11 1 1223333 677887532 1 2
Q ss_pred eEEEEeCCCC-ceEe
Q 042957 262 HIESYDGELN-MWDE 275 (371)
Q Consensus 262 ~~~~yd~~~~-~W~~ 275 (371)
.+++||+... .|..
T Consensus 276 gl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 276 HLYAINPDGTEKWNF 290 (330)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred CEEEECCCCcEEEEE
Confidence 4999997533 3443
No 198
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=92.95 E-value=5.2 Score=39.81 Aligned_cols=137 Identities=17% Similarity=0.232 Sum_probs=79.7
Q ss_pred ccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCCCCCC----
Q 042957 106 VLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPNMSTL---- 179 (371)
Q Consensus 106 ~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~---- 179 (371)
.+...|.|+.... .....+-++.+++||+.... ..++.+|..+. .|+.-...+..
T Consensus 47 ~l~~~W~~~~~~~----------~~~~~~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~W~~~~~~~~~~~~~ 107 (689)
T 1yiq_A 47 QLGLAWSYKLDLD----------RGVEATPIVVDGVMYTTGPF---------SVVYALDARDGRLIWKYDPQSDRHRAGE 107 (689)
T ss_dssp GEEEEEEEECSSC----------SCCCCCCEEETTEEEEECGG---------GCEEEEETTTCCEEEEECCCCCGGGGGG
T ss_pred CceEEEEEECCCC----------CCceecCEEECCEEEEEcCC---------CeEEEEECCCCceeEEEcCCCCcccccc
Confidence 3456777765322 01123345679999998542 35889998875 58865433211
Q ss_pred -c---eeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccc-cccC-CCCCCeEEEECCEEEE
Q 042957 180 -R---YKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVAR-MWQL-DIPPNQIVEVDNRLFS 251 (371)
Q Consensus 180 -~---~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~-~~~~-~~~~~~~~~~~~~iyv 251 (371)
. .....++.+++||+... ...+.++|.++++ |+.... -... .....+.++.++.+|+
T Consensus 108 ~~~~~~~~~~~~~~g~v~v~~~---------------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~v 172 (689)
T 1yiq_A 108 ACCDAVNRGVAVWKGKVYVGVL---------------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVI 172 (689)
T ss_dssp CTTCSCCCCCEEETTEEEEECT---------------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEE
T ss_pred ccccCCCCccEEECCEEEEEcc---------------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEE
Confidence 1 11234567899887651 2478999998874 775542 1111 1111234567888887
Q ss_pred EcCC-CCCccCeEEEEeCCCCc--eEee
Q 042957 252 SGDC-LKAWKGHIESYDGELNM--WDEV 276 (371)
Q Consensus 252 ~GG~-~~~~~~~~~~yd~~~~~--W~~~ 276 (371)
-.+. .......++.||.++.+ |+.-
T Consensus 173 g~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 173 GNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp CCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 4322 11123469999998866 8764
No 199
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.85 E-value=3.7 Score=40.57 Aligned_cols=109 Identities=7% Similarity=-0.073 Sum_probs=53.3
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE-EECCEEEEEecccCCCCCCCCccccccCeeE
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAE 217 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~ 217 (371)
++++++.|+.+ ..+.+||..+..-...-.-.... -.+++ ..+++.++.|+.+ ..+.
T Consensus 441 ~g~~l~sgs~D--------g~v~vwd~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~s~D--------------~~i~ 497 (694)
T 3dm0_A 441 DGQFALSGSWD--------GELRLWDLAAGVSTRRFVGHTKD-VLSVAFSLDNRQIVSASRD--------------RTIK 497 (694)
T ss_dssp TSSEEEEEETT--------SEEEEEETTTTEEEEEEECCSSC-EEEEEECTTSSCEEEEETT--------------SCEE
T ss_pred CCCEEEEEeCC--------CcEEEEECCCCcceeEEeCCCCC-EEEEEEeCCCCEEEEEeCC--------------CEEE
Confidence 67777777775 46889998876432211000011 11222 2255556666533 4677
Q ss_pred EEECCCCceeeccccccCCCC-CCeEEEEC-C--EEEEEcCCCCCccCeEEEEeCCCCceE
Q 042957 218 VYDTQAGKWDLVARMWQLDIP-PNQIVEVD-N--RLFSSGDCLKAWKGHIESYDGELNMWD 274 (371)
Q Consensus 218 ~yd~~t~~W~~~~~~~~~~~~-~~~~~~~~-~--~iyv~GG~~~~~~~~~~~yd~~~~~W~ 274 (371)
+||.....-..+......... ..+++... + .+++.|+.++ .+.+||+.+..-.
T Consensus 498 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~----~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 498 LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK----TVKVWNLSNCKLR 554 (694)
T ss_dssp EECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS----CEEEEETTTCCEE
T ss_pred EEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC----eEEEEECCCCcEE
Confidence 888765432222111111111 11222222 1 3566666544 4999999876543
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.76 E-value=2.3 Score=37.01 Aligned_cols=143 Identities=8% Similarity=-0.041 Sum_probs=70.0
Q ss_pred cceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCC----Cce
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMST----LRY 181 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~----~~~ 181 (371)
...+++||+.+++...... + .+. .+++. -++++|+.. ...+.+||+.+++++.+...+. .+.
T Consensus 34 ~~~i~~~d~~~~~~~~~~~-~-~~~-~~i~~~~dG~l~v~~----------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~ 100 (297)
T 3g4e_A 34 AKKVCRWDSFTKQVQRVTM-D-APV-SSVALRQSGGYVATI----------GTKFCALNWKEQSAVVLATVDNDKKNNRF 100 (297)
T ss_dssp TTEEEEEETTTCCEEEEEC-S-SCE-EEEEEBTTSSEEEEE----------TTEEEEEETTTTEEEEEEECCTTCSSEEE
T ss_pred CCEEEEEECCCCcEEEEeC-C-Cce-EEEEECCCCCEEEEE----------CCeEEEEECCCCcEEEEEecCCCCCCCCC
Confidence 3578999998876543321 1 111 22222 256666652 1368999999988877644321 122
Q ss_pred eeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCc
Q 042957 182 KCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAW 259 (371)
Q Consensus 182 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~ 259 (371)
....+.-+++||+..-........ .......++++|+.. +...+.... .. ..+++.. ++.||+.....
T Consensus 101 ~di~~d~dG~l~~~~~~~~~~~~~---~~~~~~~l~~~d~~g-~~~~~~~~~--~~-pngi~~spdg~~lyv~~~~~--- 170 (297)
T 3g4e_A 101 NDGKVDPAGRYFAGTMAEETAPAV---LERHQGALYSLFPDH-HVKKYFDQV--DI-SNGLDWSLDHKIFYYIDSLS--- 170 (297)
T ss_dssp EEEEECTTSCEEEEEEECCSBTTB---CCTTCEEEEEECTTS-CEEEEEEEE--SB-EEEEEECTTSCEEEEEEGGG---
T ss_pred CCEEECCCCCEEEecCCccccccc---ccCCCcEEEEEECCC-CEEEEeecc--cc-ccceEEcCCCCEEEEecCCC---
Confidence 222222367788743211100000 000124678888753 333321111 11 1244443 34688875432
Q ss_pred cCeEEEEeC--CCCce
Q 042957 260 KGHIESYDG--ELNMW 273 (371)
Q Consensus 260 ~~~~~~yd~--~~~~W 273 (371)
+.+++||. ++...
T Consensus 171 -~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 171 -YSVDAFDYDLQTGQI 185 (297)
T ss_dssp -TEEEEEEECTTTCCE
T ss_pred -CcEEEEeccCCCCcc
Confidence 35888876 45443
No 201
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.73 E-value=5.8 Score=36.24 Aligned_cols=200 Identities=14% Similarity=0.080 Sum_probs=109.8
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+.++|+.......+.... ....+++.. ++.||+.--. ...++++++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~-------~~~~gl~~d~~~~~ly~~D~~-----------------------~~~I~r~~~ 145 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNL-------ENAIALDFHHRRELVFWSDVT-----------------------LDRILRANL 145 (386)
T ss_dssp SCEEEECTTSCCCEEEECSC-------SCEEEEEEETTTTEEEEEETT-----------------------TTEEEEEET
T ss_pred ccceeeccCCCcEEEEecCC-------CccEEEEEecCCCeEEEEeCC-----------------------CCcEEEEec
Confidence 45777887776655543221 122355554 5789887322 357899999
Q ss_pred CCCeeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC--CCCCCceeeEEEEE--C
Q 042957 116 KSNEWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP--NMSTLRYKCVGVTW--Q 189 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~~~--~ 189 (371)
.....+.+....... -.++++ .+++||+.-.. ...++++++....-+.+. .+..+ ..+++. +
T Consensus 146 ~g~~~~~~~~~~~~~-p~glavd~~~g~lY~~d~~--------~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~ 213 (386)
T 3v65_B 146 NGSNVEEVVSTGLES-PGGLAVDWVHDKLYWTDSG--------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPME 213 (386)
T ss_dssp TSCCEEEEECSSCSC-CCCEEEETTTTEEEEEETT--------TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTT
T ss_pred CCCCcEEEEeCCCCC-ccEEEEEeCCCeEEEEcCC--------CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCC
Confidence 877655542211111 123333 47899998432 246888887654433322 12222 233343 6
Q ss_pred CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEe
Q 042957 190 GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYD 267 (371)
Q Consensus 190 ~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd 267 (371)
+.||+.--.. ...|+++++....-+.+.... .....++++- +++||+.-... ..|+++|
T Consensus 214 g~ly~td~~~-------------~~~I~r~~~dG~~~~~~~~~~--~~~PnGlavd~~~~~lY~aD~~~----~~I~~~d 274 (386)
T 3v65_B 214 GTIYWTDWGN-------------TPRIEASSMDGSGRRIIADTH--LFWPNGLTIDYAGRRMYWVDAKH----HVIERAN 274 (386)
T ss_dssp TEEEEEECSS-------------SCEEEEEETTSCSCEEEECSS--CSCEEEEEEEGGGTEEEEEETTT----TEEEEEC
T ss_pred CeEEEeccCC-------------CCEEEEEeCCCCCcEEEEECC--CCCeeeEEEeCCCCEEEEEECCC----CEEEEEe
Confidence 7899875211 147899998765433332111 1112356653 78999985433 4699999
Q ss_pred CCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEc
Q 042957 268 GELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLA 319 (371)
Q Consensus 268 ~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~G 319 (371)
+....-+.+-. ..+.. -.+++..++.||+..
T Consensus 275 ~dG~~~~~~~~---~~~~~------------------P~giav~~~~ly~td 305 (386)
T 3v65_B 275 LDGSHRKAVIS---QGLPH------------------PFAITVFEDSLYWTD 305 (386)
T ss_dssp TTSCSCEEEEC---SSCSS------------------EEEEEEETTEEEEEE
T ss_pred CCCCeeEEEEE---CCCCC------------------ceEEEEECCEEEEee
Confidence 87543333310 12322 245556788898874
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.70 E-value=6.1 Score=36.42 Aligned_cols=135 Identities=14% Similarity=0.072 Sum_probs=72.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCc-eEeCCCC-C-CCcee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQ-WTPLPNM-S-TLRYK 182 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~-p-~~~~~ 182 (371)
..+.++|+.+++-..+..... ..+ ++. -++.||+..... ...++++|..... .+.+..+ + ....-
T Consensus 152 ~~I~~id~~~g~~~~~~~~~~--~~~-ia~~~~g~~l~~~d~~~-------~~~I~~~d~~~~~~~~~~g~~~~~~~~~p 221 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGFK--GGK-PAVTKDKQRVYSIGWEG-------THTVYVYMKASGWAPTRIGQLGSTFSGKI 221 (409)
T ss_dssp TEEEEEETTTTEEEEEEETCC--BCB-CEECTTSSEEEEEBSST-------TCEEEEEEGGGTTCEEEEEECCTTSCSCC
T ss_pred CcEEEEECCCCEEEEeeccCC--CCc-eeEecCCCcEEEEecCC-------CceEEEEEcCCCceeEEeeeccchhcCCc
Confidence 568999998877655432211 112 222 245677764332 1278899887543 2233111 1 11111
Q ss_pred eEEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecccc---ccCCCC-CCeEEEE--CCEEEEEcC
Q 042957 183 CVGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARM---WQLDIP-PNQIVEV--DNRLFSSGD 254 (371)
Q Consensus 183 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~---~~~~~~-~~~~~~~--~~~iyv~GG 254 (371)
..+++. ++.||+... ...+++||+.+.....+... ...... ...++.. ++.||+...
T Consensus 222 ~~iav~p~~g~lyv~d~---------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 222 GAVALDETEEWLYFVDS---------------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp CBCEECTTSSEEEEECT---------------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEEEEeCCCCeEEEEEC---------------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 223332 688998431 14789999988775544211 111111 1155555 578999854
Q ss_pred CCCCccCeEEEEeCCCC
Q 042957 255 CLKAWKGHIESYDGELN 271 (371)
Q Consensus 255 ~~~~~~~~~~~yd~~~~ 271 (371)
.. +.|++||+...
T Consensus 287 ~~----~~I~~~~~~g~ 299 (409)
T 3hrp_A 287 NL----SSVYKITPDGE 299 (409)
T ss_dssp TT----TEEEEECTTCC
T ss_pred CC----CEEEEEecCCC
Confidence 33 35999998765
No 203
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=92.61 E-value=3.4 Score=36.40 Aligned_cols=141 Identities=15% Similarity=0.053 Sum_probs=71.4
Q ss_pred cceEEEEECCCCeeeecCC-CCCCCCCeeEEEE-C-CEEEEEcCCCCCCCCCCCceEEEEeCCCC---ceEeCCCCCCCc
Q 042957 107 LAWVLRYNVKSNEWTRCAP-LSVPRYDFACTVC-D-NKIYVAGGKSNLFSAKGTASAEVYHPELD---QWTPLPNMSTLR 180 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~-~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~yd~~t~---~W~~~~~~p~~~ 180 (371)
...+++||+.+.+.+.+.. +. .-..++.. + +.||+.-.. ...+.+|+.... +.+.+..++.
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~---~p~gia~~~dg~~lyv~d~~--------~~~I~~~~~~~~~~~~~~~~~~~~g-- 230 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELH---VPGGAEVSADSSFVLVAEFL--------SHQIVKYWLEGPKKGTAEVLVKIPN-- 230 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEES---CCCEEEECTTSSEEEEEEGG--------GTEEEEEESSSTTTTCEEEEEECSS--
T ss_pred CceEEEEeCCCCEEEEeccCCc---cCcceEECCCCCEEEEEeCC--------CCeEEEEECCCCcCCccceEEeCCC--
Confidence 3579999998877654321 11 11233333 3 358877322 246888887752 3333322322
Q ss_pred eeeEEEE--ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccC--CCCCCeEEEECCEEEEEcCCC
Q 042957 181 YKCVGVT--WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQL--DIPPNQIVEVDNRLFSSGDCL 256 (371)
Q Consensus 181 ~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~--~~~~~~~~~~~~~iyv~GG~~ 256 (371)
+..+. -+++|||............ .....+.+||+....-..+.. +.. ......++..+++||+.....
T Consensus 231 --P~gi~~d~~G~l~va~~~~~~~~~~~----~~~~~v~~~d~~G~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~~~ 303 (322)
T 2fp8_A 231 --PGNIKRNADGHFWVSSSEELDGNMHG----RVDPKGIKFDEFGNILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTLFH 303 (322)
T ss_dssp --EEEEEECTTSCEEEEEEEETTSSTTS----CEEEEEEEECTTSCEEEEEEC-CTTTTTSCCCEEEEETTEEEEECSSC
T ss_pred --CCCeEECCCCCEEEEecCcccccccC----CCccEEEEECCCCCEEEEEEC-CCCCccccceEEEEeCCEEEEeecCC
Confidence 22222 2567998864311000000 012468899987544433332 211 112234556788999885433
Q ss_pred CCccCeEEEEeCCCC
Q 042957 257 KAWKGHIESYDGELN 271 (371)
Q Consensus 257 ~~~~~~~~~yd~~~~ 271 (371)
. .+.+|+++.+
T Consensus 304 ~----~i~~~~~~~~ 314 (322)
T 2fp8_A 304 G----SVGILVYDKK 314 (322)
T ss_dssp S----EEEEEEC---
T ss_pred C----ceEEEecccc
Confidence 3 5889987643
No 204
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.56 E-value=1.7 Score=43.27 Aligned_cols=123 Identities=14% Similarity=0.211 Sum_probs=71.4
Q ss_pred EEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCC-------CCCCeEEEECCEEEEEcCC
Q 042957 185 GVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLD-------IPPNQIVEVDNRLFSSGDC 255 (371)
Q Consensus 185 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~-------~~~~~~~~~~~~iyv~GG~ 255 (371)
-++.+++||+... ...++++|.++.+ |+.-...+... ....+.++.+++||+....
T Consensus 62 P~v~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d 126 (668)
T 1kv9_A 62 PLFHDGVIYTSMS---------------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD 126 (668)
T ss_dssp CEEETTEEEEEEG---------------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT
T ss_pred CEEECCEEEEECC---------------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC
Confidence 3578999999873 2468899988764 87643322110 0112456678888886432
Q ss_pred CCCccCeEEEEeCCCCc--eEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeE
Q 042957 256 LKAWKGHIESYDGELNM--WDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSM 333 (371)
Q Consensus 256 ~~~~~~~~~~yd~~~~~--W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 333 (371)
..++.+|.++.+ |+.-.. +-... .....+-+..++++|+-.+.... .....
T Consensus 127 -----g~l~alD~~tG~~~W~~~~~----~~~~~--------------~~~~~~P~v~~~~v~vg~~~~~~----~~~g~ 179 (668)
T 1kv9_A 127 -----GRLIALDAKTGKAIWSQQTT----DPAKP--------------YSITGAPRVVKGKVIIGNGGAEY----GVRGF 179 (668)
T ss_dssp -----SEEEEEETTTCCEEEEEECS----CTTSS--------------CBCCSCCEEETTEEEECCBCTTT----CCBCE
T ss_pred -----CEEEEEECCCCCEeeeeccC----CCCCc--------------ceecCCCEEECCEEEEeCCCCCc----CCCCE
Confidence 359999988764 886521 10000 01222334567887763221110 12357
Q ss_pred EEEeeccccccccccc
Q 042957 334 VHIFDTAAKSDAWRSF 349 (371)
Q Consensus 334 v~~~d~~~~~~~W~~~ 349 (371)
|+.||+++.+..|+.-
T Consensus 180 v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 180 VSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEETTTCCEEEEEE
T ss_pred EEEEECCCCcEEEEec
Confidence 8999998887778763
No 205
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=92.52 E-value=5.3 Score=35.28 Aligned_cols=136 Identities=13% Similarity=-0.035 Sum_probs=75.3
Q ss_pred ceEEEEECCCCeeeecC--CCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee
Q 042957 108 AWVLRYNVKSNEWTRCA--PLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~--~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~ 183 (371)
..++++|+....-+.+. .+..| ..+++ .++.||+..-. ....++++++....-+.+..... ..-.
T Consensus 99 ~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~-------~~~~I~~~~~dG~~~~~~~~~~~-~~P~ 167 (316)
T 1ijq_A 99 GTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-------TPAKIKKGGLNGVDIYSLVTENI-QWPN 167 (316)
T ss_dssp TEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS-------SSCEEEEEETTSCCEEEEECSSC-SCEE
T ss_pred CEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC-------CCCeEEEEcCCCCCeEEEEECCC-CCce
Confidence 56888888765433221 22222 23444 37899987421 12578999886544333321111 1122
Q ss_pred EEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccC
Q 042957 184 VGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKG 261 (371)
Q Consensus 184 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~ 261 (371)
.+++- +++||+.-.. ...|+++|+....-+.+...........++++.++.||+.--.. .
T Consensus 168 gla~d~~~~~lY~~D~~--------------~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~----~ 229 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSK--------------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN----E 229 (316)
T ss_dssp EEEEETTTTEEEEEETT--------------TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTT----T
T ss_pred EEEEeccCCEEEEEECC--------------CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCC----C
Confidence 33333 6789998632 25789999875443333222111112246777899999985332 3
Q ss_pred eEEEEeCCCCc
Q 042957 262 HIESYDGELNM 272 (371)
Q Consensus 262 ~~~~yd~~~~~ 272 (371)
.|.++|+.+.+
T Consensus 230 ~V~~~~~~~g~ 240 (316)
T 1ijq_A 230 AIFSANRLTGS 240 (316)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEeCCCCc
Confidence 59999986543
No 206
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.48 E-value=6.6 Score=36.29 Aligned_cols=60 Identities=8% Similarity=-0.007 Sum_probs=35.3
Q ss_pred CeeEEEEC--CC-CceeeccccccCCCCCCeEEEECCEEEEEcCCCC-----CccCeEEEEeCCCCceE
Q 042957 214 SSAEVYDT--QA-GKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLK-----AWKGHIESYDGELNMWD 274 (371)
Q Consensus 214 ~~v~~yd~--~t-~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~-----~~~~~~~~yd~~~~~W~ 274 (371)
..+.+||. .+ .++..+..+... .....++...+.+++..+... ...-.++.++.+++.|+
T Consensus 330 ~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 330 KCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp SEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred CeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 46888888 33 445555444433 222356666777777765432 11235777788888885
No 207
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.39 E-value=7.3 Score=36.63 Aligned_cols=46 Identities=15% Similarity=0.281 Sum_probs=30.5
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC--CCCCCCceeeEEEEECCEEEEEec
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL--PNMSTLRYKCVGVTWQGKIHVVSG 197 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~~~~~~~~~~~~~lyv~GG 197 (371)
++++|+|-|. ..+.||..+.+.... +.+|. . -++...++++|+|-|
T Consensus 158 ~~~~yfFkG~----------~yw~yd~~~~~~~~~~w~gi~~--i-DAA~~~~g~~YfFkG 205 (460)
T 1qhu_A 158 DEGILFFQGN----------RKWFWDLTTGTKKERSWPAVGN--C-TSALRWLGRYYCFQG 205 (460)
T ss_dssp SSEEEEEETT----------EEEEEETTTTEEEEECCTTSCC--C-SEEEEETTEEEEEET
T ss_pred CCeEEEEecc----------cEEEEecccceeecccCCCCCc--c-chheeeCCceEEEEC
Confidence 6788988764 478899887655431 22332 2 244566899999987
No 208
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.39 E-value=4.1 Score=38.85 Aligned_cols=108 Identities=7% Similarity=0.119 Sum_probs=54.0
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEE
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEV 218 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~ 218 (371)
+++.++.++.+ ..+.+||.....-..+....... ...+..-++++++.++.+ ..+.+
T Consensus 437 d~~~l~~~~~d--------~~v~~w~~~~~~~~~~~~~~~~v-~~~~~spd~~~las~~~d--------------~~i~i 493 (577)
T 2ymu_A 437 DDQTIASASDD--------KTVKLWNRNGQLLQTLTGHSSSV-RGVAFSPDGQTIASASDD--------------KTVKL 493 (577)
T ss_dssp TSSEEEEEETT--------SEEEEEETTSCEEEEEECCSSCE-EEEEECTTSCEEEEEETT--------------SEEEE
T ss_pred CCCEEEEEcCC--------CEEEEEECCCCEEEEEcCCCCCE-EEEEEcCCCCEEEEEeCC--------------CEEEE
Confidence 56666676654 35788886554433332211111 111122366777766533 46778
Q ss_pred EECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 219 YDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 219 yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
||.....-..+.. -.....+++.. ++++++.++.+. .+.+||.....-..+
T Consensus 494 w~~~~~~~~~~~~---h~~~v~~l~~s~dg~~l~s~~~dg----~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 494 WNRNGQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDK----TVKLWNRNGQLLQTL 545 (577)
T ss_dssp EETTSCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTS----EEEEECTTSCEEEEE
T ss_pred EcCCCCEEEEEeC---CCCCEEEEEEcCCCCEEEEEECcC----EEEEEeCCCCEEEEE
Confidence 8864432222211 11111123332 566777766544 489999765544444
No 209
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.37 E-value=7.4 Score=36.60 Aligned_cols=47 Identities=6% Similarity=0.045 Sum_probs=29.6
Q ss_pred eEEEEECCCCeeeec--CCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC
Q 042957 109 WVLRYNVKSNEWTRC--APLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD 168 (371)
Q Consensus 109 ~v~~yd~~~~~W~~~--~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 168 (371)
..|+||..+++...- +.++ . --++....+++|+|-|. ..+.||..+.
T Consensus 168 ~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~----------~y~rfd~~~~ 216 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGN----------QFLRFNPVSG 216 (460)
T ss_dssp EEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETT----------EEEEECTTTC
T ss_pred cEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECC----------EEEEEcCccC
Confidence 379999887764421 2222 2 23555567999999775 3677776554
No 210
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.34 E-value=1.7 Score=43.35 Aligned_cols=125 Identities=13% Similarity=0.189 Sum_probs=72.7
Q ss_pred EEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCC-------CCCCeEEEECCEEEEEcCC
Q 042957 185 GVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLD-------IPPNQIVEVDNRLFSSGDC 255 (371)
Q Consensus 185 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~-------~~~~~~~~~~~~iyv~GG~ 255 (371)
-++.++.||+... ...++++|.++.+ |+.-....... ....++++.+++||+....
T Consensus 73 P~v~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d 137 (677)
T 1kb0_A 73 PVVVDGIMYVSAS---------------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD 137 (677)
T ss_dssp CEEETTEEEEECG---------------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT
T ss_pred CEEECCEEEEECC---------------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC
Confidence 3568999998873 2468999998774 87654322110 1122466788898886432
Q ss_pred CCCccCeEEEEeCCCCc--eEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeE
Q 042957 256 LKAWKGHIESYDGELNM--WDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSM 333 (371)
Q Consensus 256 ~~~~~~~~~~yd~~~~~--W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 333 (371)
..++++|.++.+ |+.-... +.... .....+.+..++++|+..+..+. .....
T Consensus 138 -----g~l~alD~~tG~~~W~~~~~~---~~~~~--------------~~~~~~p~v~~~~v~v~~~~~~~----~~~g~ 191 (677)
T 1kb0_A 138 -----GRLIALDAATGKEVWHQNTFE---GQKGS--------------LTITGAPRVFKGKVIIGNGGAEY----GVRGY 191 (677)
T ss_dssp -----SEEEEEETTTCCEEEEEETTT---TCCSS--------------CBCCSCCEEETTEEEECCBCTTT----CCBCE
T ss_pred -----CEEEEEECCCCCEEeeecCCc---CcCcC--------------cccccCcEEECCEEEEEeccccc----CCCCE
Confidence 359999997754 8765210 10000 01122334457787764332110 12357
Q ss_pred EEEeecccccccccccC
Q 042957 334 VHIFDTAAKSDAWRSFE 350 (371)
Q Consensus 334 v~~~d~~~~~~~W~~~~ 350 (371)
|+.||.++.+..|+.-.
T Consensus 192 v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 192 ITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEETTTCCEEEEEES
T ss_pred EEEEECCCCcEEEEecc
Confidence 89999988867787643
No 211
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.17 E-value=7.7 Score=37.23 Aligned_cols=57 Identities=9% Similarity=0.032 Sum_probs=35.0
Q ss_pred eEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 216 AEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 216 v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
+.+||+++.+-+.+...+. ......-+++.++++.........++++|+++.+++.+
T Consensus 134 ~~l~d~~~g~~~~l~~~~~----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l 190 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF 190 (582)
T ss_dssp EEEEEEETTEEEEEEEESS----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE
T ss_pred ceEEEccCCcEEEeecCCC----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe
Confidence 3478988887666654332 12233346666655543322224599999999988887
No 212
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=92.10 E-value=3.2 Score=38.99 Aligned_cols=65 Identities=12% Similarity=0.052 Sum_probs=40.8
Q ss_pred CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceee-----cc-ccccCCCCCCeEEEECCEEEEEcCCCCCccCe
Q 042957 189 QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDL-----VA-RMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGH 262 (371)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~-----~~-~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 262 (371)
++++|+|-| +..++||..+.+-.. +. ..+.......++...++++|+|-|. .
T Consensus 367 ~~k~yfFkG----------------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFFkg~------~ 424 (450)
T 1su3_A 367 TGKTYFFVA----------------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGT------R 424 (450)
T ss_dssp TTEEEEEET----------------TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEEETT------E
T ss_pred CCeEEEEeC----------------CEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCeEEEEeCC------E
Confidence 689999986 467889877654321 11 1111112233555678999999653 5
Q ss_pred EEEEeCCCCceEe
Q 042957 263 IESYDGELNMWDE 275 (371)
Q Consensus 263 ~~~yd~~~~~W~~ 275 (371)
.++||..+.+-..
T Consensus 425 ywr~d~~~~~v~~ 437 (450)
T 1su3_A 425 QYKFDPKTKRILT 437 (450)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCcceEec
Confidence 8899988766544
No 213
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=92.04 E-value=4.6 Score=33.51 Aligned_cols=152 Identities=12% Similarity=0.083 Sum_probs=75.4
Q ss_pred eEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceE--eC----CCCCCCceeeEEEE-ECCEEEEEecccCCCCCCC
Q 042957 134 ACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWT--PL----PNMSTLRYKCVGVT-WQGKIHVVSGFAQRADSDG 206 (371)
Q Consensus 134 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~--~~----~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~ 206 (371)
+++...+++|+|=|. -+++++.....+. .+ +.||... .++... .++++|+|-|
T Consensus 28 Ai~~~~g~~y~Fkg~----------~~wr~~~~~~~~~p~~I~~~wp~Lp~~i-DAa~~~~~~~~iyfFkG--------- 87 (207)
T 1pex_A 28 AITSLRGETMIFKDR----------FFWRLHPQQVDAELFLTKSFWPELPNRI-DAAYEHPSHDLIFIFRG--------- 87 (207)
T ss_dssp EEEEETTEEEEEETT----------EEEEECSSSSCCEEEEHHHHCTTSCSSC-CEEEEETTTTEEEEEET---------
T ss_pred EEEeCCCcEEEEECC----------EEEEEeCCCcCCCceehhHhccCCCCCc-cEEEEeccCCcEEEEcc---------
Confidence 455679999999664 2555554433221 11 3455432 222222 2689999986
Q ss_pred CccccccCeeEEEECCCCce---eeccc--cccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCceEeecCc
Q 042957 207 SVHFTERSSAEVYDTQAGKW---DLVAR--MWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNMWDEVNGS 279 (371)
Q Consensus 207 ~~~~~~~~~v~~yd~~t~~W---~~~~~--~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~ 279 (371)
+.+++|+..+..- +.+.. +|.......++... ++++|+|-| +..++||..+++-.
T Consensus 88 -------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG------~~ywr~d~~~~~~d----- 149 (207)
T 1pex_A 88 -------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG------NQVWRYDDTNHIMD----- 149 (207)
T ss_dssp -------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET------TEEEEEETTTTEEC-----
T ss_pred -------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC------CEEEEEeCcCcccc-----
Confidence 3455565322111 12221 22111122334333 479999966 35899998765321
Q ss_pred ccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 280 CLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 280 ~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
..-|..+ .+.|+-.+..-.++...++++|++=|. ..+.||..+.
T Consensus 150 --~gyPr~i------~~~~~Gip~~iDaAf~~~g~~YfFkg~-----------~y~rf~~~~~ 193 (207)
T 1pex_A 150 --KDYPRLI------EEDFPGIGDKVDAVYEKNGYIYFFNGP-----------IQFEYSIWSN 193 (207)
T ss_dssp --SSCCCBH------HHHSTTSCSCCSEEEEETTEEEEEETT-----------EEEEEETTTT
T ss_pred --CCCCccH------HHcCCCCCCCccEEEEcCCcEEEEECC-----------EEEEEeCCcc
Confidence 1111110 001211112223444568899999664 4567777654
No 214
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.97 E-value=2.2 Score=42.56 Aligned_cols=123 Identities=12% Similarity=0.188 Sum_probs=71.0
Q ss_pred EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCC-------CCCCeEEEECCEEEEEcCCC
Q 042957 186 VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLD-------IPPNQIVEVDNRLFSSGDCL 256 (371)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~-------~~~~~~~~~~~~iyv~GG~~ 256 (371)
++.+++||+... ...++++|.++++ |+.-....... ....+.++.+++||+....
T Consensus 67 ~v~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d- 130 (689)
T 1yiq_A 67 IVVDGVMYTTGP---------------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD- 130 (689)
T ss_dssp EEETTEEEEECG---------------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-
T ss_pred EEECCEEEEEcC---------------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC-
Confidence 578999999763 2468999998764 87643322110 0112456778888886432
Q ss_pred CCccCeEEEEeCCCCc--eEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEE
Q 042957 257 KAWKGHIESYDGELNM--WDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMV 334 (371)
Q Consensus 257 ~~~~~~~~~yd~~~~~--W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v 334 (371)
..++.+|.++.+ |+.-... +.... .....+-++.++.+|+-.+.... .....|
T Consensus 131 ----g~l~AlDa~TG~~~W~~~~~~---~~~~~--------------~~~~~sP~v~~g~v~vg~~~~~~----~~~g~v 185 (689)
T 1yiq_A 131 ----GRLEAIDAKTGQRAWSVDTRA---DHKRS--------------YTITGAPRVVNGKVVIGNGGAEF----GVRGYV 185 (689)
T ss_dssp ----SEEEEEETTTCCEEEEEECCS---CTTSC--------------CBCCSCCEEETTEEEECCBCTTT----CCBCEE
T ss_pred ----CEEEEEECCCCCEeeeecCcC---CCCCC--------------ccccCCcEEECCEEEEEeCCCcc----CCCCEE
Confidence 359999998754 8865210 10000 01122334568888773221110 123578
Q ss_pred EEeeccccccccccc
Q 042957 335 HIFDTAAKSDAWRSF 349 (371)
Q Consensus 335 ~~~d~~~~~~~W~~~ 349 (371)
+.||+++.+..|+.-
T Consensus 186 ~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 186 TAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEE
T ss_pred EEEECCCCcEEEEec
Confidence 999999886778754
No 215
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.86 E-value=5.6 Score=39.44 Aligned_cols=99 Identities=11% Similarity=-0.039 Sum_probs=52.8
Q ss_pred cceEEEEECCCCeeeecCCCCCC----------------C--------CCeeEEEECCEEEEEcCCCCCCCCCCCceEEE
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVP----------------R--------YDFACTVCDNKIYVAGGKSNLFSAKGTASAEV 162 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~----------------r--------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 162 (371)
...++.+|..+++..++...... | .......-+++.++++.. ..+++
T Consensus 63 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~---------~~i~~ 133 (741)
T 2ecf_A 63 QLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG---------GELYL 133 (741)
T ss_dssp EEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET---------TEEEE
T ss_pred ccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC---------CcEEE
Confidence 45789999988877655322100 0 111222235554454432 57999
Q ss_pred EeCCCC---ceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecc
Q 042957 163 YHPELD---QWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVA 230 (371)
Q Consensus 163 yd~~t~---~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 230 (371)
+|..+. .-..+...... .......-+++..+++. ...++++|+.+++...+.
T Consensus 134 ~d~~~~~~~~~~~l~~~~~~-~~~~~~SPDG~~la~~~---------------~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 134 YDLKQEGKAAVRQLTHGEGF-ATDAKLSPKGGFVSFIR---------------GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp EESSSCSTTSCCBCCCSSSC-EEEEEECTTSSEEEEEE---------------TTEEEEEETTTTEEEECC
T ss_pred EECCCCCcceEEEcccCCcc-cccccCCCCCCEEEEEe---------------CCcEEEEecCCCCEEEec
Confidence 999887 54444332211 11122233565445542 136888999887766553
No 216
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=91.72 E-value=4.8 Score=33.04 Aligned_cols=147 Identities=14% Similarity=0.153 Sum_probs=80.8
Q ss_pred EEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCC--eee--ec----CCCCCCCCCeeEEEE--
Q 042957 69 SIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSN--EWT--RC----APLSVPRYDFACTVC-- 138 (371)
Q Consensus 69 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~--~~----~~~~~~r~~~~~~~~-- 138 (371)
+++.+++++|+|=|. .+|+++.... ... .+ +.+|.. -. |+...
T Consensus 11 Ai~~~~g~~yfFkg~-------------------------~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~ 63 (195)
T 1itv_A 11 AIAEIGNQLYLFKDG-------------------------KYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPL 63 (195)
T ss_dssp EEEEETTEEEEEETT-------------------------EEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTT
T ss_pred EEEEeCCEEEEEECC-------------------------EEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECC
Confidence 566679999999665 3788876542 221 11 234421 11 22222
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCc-eEeCC--CCCCC--ceeeEEEEECCEEEEEecccCCCCCCCCcccccc
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQ-WTPLP--NMSTL--RYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTER 213 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~~--~~p~~--~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~ 213 (371)
++++|+|-|. ..++|+..+.. =+.+. .+|.. ...++....++++|+|-|
T Consensus 64 ~~~~yfFkG~----------~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg---------------- 117 (195)
T 1itv_A 64 SKKLFFFSGR----------QVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG---------------- 117 (195)
T ss_dssp TCCEEEEETT----------EEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET----------------
T ss_pred CCeEEEEeCC----------EEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC----------------
Confidence 6889999774 35666643211 01122 23331 233333334789999976
Q ss_pred CeeEEEECCCCceee-----ccc-cccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceE
Q 042957 214 SSAEVYDTQAGKWDL-----VAR-MWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWD 274 (371)
Q Consensus 214 ~~v~~yd~~t~~W~~-----~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~ 274 (371)
+..+.||..+++-.. +.. .+.......++...++.+|++-|. ..++||..+..-.
T Consensus 118 ~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~g~~Yffkg~------~y~~~~~~~~~v~ 178 (195)
T 1itv_A 118 RRLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQDR------FYWRVSSRSELNQ 178 (195)
T ss_dssp TEEEEEETTTTEECGGGCEEHHHHSTTSCSSCSEEEEETTEEEEEETT------EEEEEECCTTCCE
T ss_pred CEEEEEeCCcccccCCCccChhhcCCCCCCCCCEEEEeCCeEEEEeCC------EEEEEECCccEEe
Confidence 467889987765322 110 111111234566678999999663 5888888776533
No 217
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=91.69 E-value=12 Score=37.77 Aligned_cols=201 Identities=10% Similarity=-0.004 Sum_probs=106.4
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
.+.+++.....+..+.... +...+++.. ++.||+.-.. ...++++++.
T Consensus 405 ~Ir~i~l~~~~~~~l~~~~-------~~~~gl~~d~~~~~lY~sD~~-----------------------~~~I~~~~l~ 454 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPNL-------RNVVALDTEVASNRIYWSDLS-----------------------QRMICSTQLD 454 (791)
T ss_dssp SEEEECTTSCCCEEEECSC-------SSEEEEEEETTTTEEEEEETT-----------------------TTEEEEEEC-
T ss_pred ceeEeeccCCcceeeecCC-------CceEEEeecccCCeeEEeecc-----------------------ceeEEEEecc
Confidence 3556666665555543221 122345554 5788888443 3467777776
Q ss_pred CC----eeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC--CCCCCceeeEEEE-
Q 042957 117 SN----EWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP--NMSTLRYKCVGVT- 187 (371)
Q Consensus 117 ~~----~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~~- 187 (371)
.. ....+..... ..-.++++ .+++||+.-.. ...|+++++....-+.+. .+..++ .+++
T Consensus 455 g~~~~~~~~~vi~~~l-~~P~GLAvD~~~~~LY~tD~~--------~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVD 522 (791)
T 3m0c_C 455 RAHGVSSYDTVISRDI-QAPDGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVD 522 (791)
T ss_dssp -------CEEEECSSC-SCCCEEEEETTTTEEEEEETT--------TTEEEEEETTSSSEEEEEECTTCCEE---EEEEE
T ss_pred CCCCCcceeEEEecCC-CCcceeeeeecCCcEEEEecC--------CCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEe
Confidence 42 2222211111 11123444 36799998432 357999998866554442 222222 3344
Q ss_pred -ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEE
Q 042957 188 -WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 188 -~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 264 (371)
.++.||+.--. ....|+++++....-+.+.... .....++++- +++||+.-.. ...|+
T Consensus 523 p~~g~LYwtD~g-------------~~~~I~~~~~dG~~~~~lv~~~--l~~P~GLavD~~~~~LYwaD~~----~~~I~ 583 (791)
T 3m0c_C 523 PVHGFMYWTDWG-------------TPAKIKKGGLNGVDIYSLVTEN--IQWPNGITLDLLSGRLYWVDSK----LHSIS 583 (791)
T ss_dssp TTTTEEEEEECS-------------SSCEEEEEETTSCCEEEEECSS--CSCEEEEEEETTTTEEEEEETT----TTEEE
T ss_pred cCCCCEEEecCC-------------CCCeEEEEecCCCceEEEEeCC--CCCceEEEEecCCCeEEEEeCC----CCcEE
Confidence 36889987611 1146888888765444332211 1112355554 7899998543 24699
Q ss_pred EEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEc
Q 042957 265 SYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLA 319 (371)
Q Consensus 265 ~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~G 319 (371)
++|+....=+.+... ...++ ..++++..+++||+..
T Consensus 584 ~~d~dG~~~~~v~~~-~~~l~------------------~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 584 SIDVNGGNRKTILED-EKRLA------------------HPFSLAVFEDKVFWTD 619 (791)
T ss_dssp EEETTSCSCEEEEEC-TTTTS------------------SEEEEEEETTEEEEEE
T ss_pred EEecCCCceEEEecC-CCccC------------------CCCEEEEeCCEEEEEE
Confidence 999976544444100 01222 3356777888999875
No 218
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.64 E-value=3.5 Score=39.70 Aligned_cols=97 Identities=10% Similarity=-0.060 Sum_probs=54.2
Q ss_pred EEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECC
Q 042957 111 LRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQG 190 (371)
Q Consensus 111 ~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~ 190 (371)
..||..+++-+++...+. ......-+++.+++++.+.. ....++++|..+.+++.+..-+... ......-++
T Consensus 135 ~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~----~~~~i~~~d~~~g~~~~l~~~~~~~-~~~~~SpDG 206 (582)
T 3o4h_A 135 ALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGG----GRVSLFTSNLSSGGLRVFDSGEGSF-SSASISPGM 206 (582)
T ss_dssp EEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEET----TEEEEEEEETTTCCCEEECCSSCEE-EEEEECTTS
T ss_pred eEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCC----CCeEEEEEcCCCCCceEeecCCCcc-ccceECCCC
Confidence 367888887666643332 23333346665555544321 1246999999999888764322211 122223366
Q ss_pred EEEEEecccCCCCCCCCccccccCeeEEEECCCCcee
Q 042957 191 KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWD 227 (371)
Q Consensus 191 ~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~ 227 (371)
+.++.+... ....++++|+++++..
T Consensus 207 ~~l~~~~~~------------~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 207 KVTAGLETA------------REARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEECS------------SCEEEEEECTTTCCEE
T ss_pred CEEEEccCC------------CeeEEEEEcCCCCcEE
Confidence 544433221 1147899999988876
No 219
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.61 E-value=6.5 Score=34.40 Aligned_cols=61 Identities=10% Similarity=0.045 Sum_probs=33.1
Q ss_pred EEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCce-eeEEE-EECCEEEEEecccCCCCCCCCccccccCeeEE
Q 042957 141 KIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRY-KCVGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAEV 218 (371)
Q Consensus 141 ~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~-~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~ 218 (371)
.+++.|+.+ ..+.+||..+.+-... +..-.. -..++ .-++++++.|+.+ ..+.+
T Consensus 167 ~~l~s~~~d--------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~d--------------g~i~i 222 (319)
T 3frx_A 167 VTIISAGND--------KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKD--------------GEIML 222 (319)
T ss_dssp CEEEEEETT--------SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETT--------------CEEEE
T ss_pred cEEEEEeCC--------CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCC--------------CeEEE
Confidence 356666664 3578888876543221 111111 11222 2356677777643 47888
Q ss_pred EECCCCc
Q 042957 219 YDTQAGK 225 (371)
Q Consensus 219 yd~~t~~ 225 (371)
||+.+.+
T Consensus 223 wd~~~~~ 229 (319)
T 3frx_A 223 WNLAAKK 229 (319)
T ss_dssp EETTTTE
T ss_pred EECCCCc
Confidence 9998765
No 220
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.57 E-value=2.6 Score=42.16 Aligned_cols=177 Identities=11% Similarity=0.001 Sum_probs=89.2
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
.+.++|+.+.....+.... +..++++.. ++.||+.--. ...++++++.
T Consensus 387 ~I~~id~~~~~~~~~~~~~-------~~p~gla~d~~~~~Ly~sD~~-----------------------~~~I~~~~~~ 436 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNL-------RNVVALDTEVASNRIYWSDLS-----------------------QRMICSTQLD 436 (699)
T ss_dssp C-CEECTTSCCEECCSCCC-------TTCCCCEEETTTTEEEECCTT-----------------------TTSBEEEESC
T ss_pred ceEEEeCCCCcceeeeccC-------cceEEEccccccCeEEEEecC-----------------------CCeEEEEecC
Confidence 4667777776665543322 122345554 5788887332 2457888876
Q ss_pred C----CeeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC--CCCCceeeEEEE-
Q 042957 117 S----NEWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN--MSTLRYKCVGVT- 187 (371)
Q Consensus 117 ~----~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~~~~~~~~~- 187 (371)
. ..-..+-.... ..-.++++ .+++||+.-.. ...++++++....-+.+.. +..++ .+++
T Consensus 437 g~~~~~~~~~~i~~~~-~~P~glavD~~~g~LY~tD~~--------~~~I~v~d~dg~~~~~l~~~~~~~P~---giavD 504 (699)
T 1n7d_A 437 RAHGVSSYDTVISRDI-QAPDGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFREQGSKPR---AIVVD 504 (699)
T ss_dssp CCCC-CCCCCBCCSCC---CCCEECCCSSSBCEECCTT--------TSCEEEEBSSSCCEEEECCCSSCCCC---CEECC
T ss_pred CCCCCcceEEEEeCCC-CCcceEEEEeeCCcEEEEecc--------CCeEEEEecCCCceEEEEeCCCCCcc---eEEEc
Confidence 5 11111111000 11122333 46789886322 3468889887665444322 22222 2233
Q ss_pred -ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEE
Q 042957 188 -WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 188 -~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 264 (371)
.++.||+..-. ....|+++++....-+.+... .. ....++++- +++||+.-... ..|+
T Consensus 505 p~~g~ly~td~~-------------~~~~I~~~~~dG~~~~~l~~~-~l-~~PnGlavd~~~~~LY~aD~~~----~~I~ 565 (699)
T 1n7d_A 505 PVHGFMYWTDWG-------------TPAKIKKGGLNGVDIYSLVTE-NI-QWPNGITLDLLSGRLYWVDSKL----HSIS 565 (699)
T ss_dssp SSSSCCEECCCS-------------SSCCEEBCCSSSCCCCEESCS-SC-SSCCCEEECTTTCCEEEEETTT----TEEE
T ss_pred cCCCcEEEcccC-------------CCCeEEEEeCCCCCeeEEEeC-CC-CCccEEEEeccCCEEEEEecCC----CeEE
Confidence 35778876511 113577777764433332211 11 112356553 67899985433 4699
Q ss_pred EEeCCCCceEee
Q 042957 265 SYDGELNMWDEV 276 (371)
Q Consensus 265 ~yd~~~~~W~~~ 276 (371)
++|+....-+.+
T Consensus 566 ~~d~dG~~~~~~ 577 (699)
T 1n7d_A 566 SIDVNGGNRKTI 577 (699)
T ss_dssp EECSSSSCCEEE
T ss_pred EEccCCCceEEE
Confidence 999976544444
No 221
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.48 E-value=3.2 Score=40.29 Aligned_cols=124 Identities=13% Similarity=0.144 Sum_probs=71.5
Q ss_pred EEEECCEEEEEecccCCCCCCCCccccccCeeEEEEC-CCC--ceeeccccccC-----C--CCCCeEEEECCEEEEEcC
Q 042957 185 GVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDT-QAG--KWDLVARMWQL-----D--IPPNQIVEVDNRLFSSGD 254 (371)
Q Consensus 185 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~-~t~--~W~~~~~~~~~-----~--~~~~~~~~~~~~iyv~GG 254 (371)
-++.++.||+.... ...++++|. ++. .|+.-...... . ....+.++.+++||+...
T Consensus 58 P~v~~g~vyv~~~~--------------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~ 123 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF--------------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA 123 (571)
T ss_dssp CEEETTEEEEECST--------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT
T ss_pred cEEECCEEEEEeCC--------------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC
Confidence 35679999998742 146899999 766 48764332211 0 011245677999988743
Q ss_pred CCCCccCeEEEEeCCCC--ceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceee
Q 042957 255 CLKAWKGHIESYDGELN--MWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMS 332 (371)
Q Consensus 255 ~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~ 332 (371)
. ..++++|.++. .|+.-- ...... .....+-+..+++||+-.+..+. ....
T Consensus 124 d-----g~l~alD~~tG~~~W~~~~----~~~~~~--------------~~~~~~P~v~~g~v~vg~~~~~~----~~~g 176 (571)
T 2ad6_A 124 N-----GHLLALDAKTGKINWEVEV----CDPKVG--------------STLTQAPFVAKDTVLMGCSGAEL----GVRG 176 (571)
T ss_dssp T-----SEEEEEETTTCCEEEEEEC----CCGGGT--------------CBCCSCCEEETTEEEEECBCGGG----TCCC
T ss_pred C-----CEEEEEECCCCCEEEEecC----CCCCcc--------------ceeccCCEEECCEEEEEecCCcc----CCCC
Confidence 2 35999999876 587541 110000 01112223457888764432110 1235
Q ss_pred EEEEeeccccccccccc
Q 042957 333 MVHIFDTAAKSDAWRSF 349 (371)
Q Consensus 333 ~v~~~d~~~~~~~W~~~ 349 (371)
.|+.||+++.+..|+.-
T Consensus 177 ~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 177 AVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCcEEEEEc
Confidence 78899998876778754
No 222
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=91.30 E-value=2.6 Score=36.59 Aligned_cols=190 Identities=9% Similarity=0.019 Sum_probs=88.7
Q ss_pred ceeEEeCCCCceecc-CCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 39 WLASYNPSNNTWSHV-SHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~-~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
.+++||+. ++...+ ....... ....-..++.. ++.+|+........ . . .+..........+++||+.
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~--~~~~~~~i~~d~~g~l~v~~~~~~~~-~-~------~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGR--RMQGCNDCAFDYEGNLWITAPAGEVA-P-A------DYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSC--BCBCCCEEEECTTSCEEEEECBCBCT-T-S------CCCBTTSSSCEEEEEECTT
T ss_pred CEEEEeCC-CCEEEEEeccCCCc--cccCCcCEEECCCCCEEEEecCcccc-c-c------cccccccCCCCeEEEECCC
Confidence 58889988 776655 3221110 11122345544 57888875432000 0 0 0000011223578999986
Q ss_pred CCeeeecC-CCCCCCCCeeEEEE-----CC-EEEEEcCCCCCCCCCCCceEEEEeCC-CCceEe---CCCCCCC--ceee
Q 042957 117 SNEWTRCA-PLSVPRYDFACTVC-----DN-KIYVAGGKSNLFSAKGTASAEVYHPE-LDQWTP---LPNMSTL--RYKC 183 (371)
Q Consensus 117 ~~~W~~~~-~~~~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~~~~~~yd~~-t~~W~~---~~~~p~~--~~~~ 183 (371)
.+...+. .+.. -..++.. ++ .||+.... ...+.+||.. +.+... ...++.. ..-.
T Consensus 162 -g~~~~~~~~~~~---~~~i~~~~~~d~dg~~l~v~~~~--------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 229 (314)
T 1pjx_A 162 -GQMIQVDTAFQF---PNGIAVRHMNDGRPYQLIVAETP--------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGAD 229 (314)
T ss_dssp -SCEEEEEEEESS---EEEEEEEECTTSCEEEEEEEETT--------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEE
T ss_pred -CCEEEeccCCCC---cceEEEecccCCCCCEEEEEECC--------CCeEEEEECCCCCccccceEEEECCCCCCCCCC
Confidence 5554432 1111 1233333 34 57776432 2468888865 343321 1122221 1111
Q ss_pred EEEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CCE-EEEEcCCCCCcc
Q 042957 184 VGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNR-LFSSGDCLKAWK 260 (371)
Q Consensus 184 ~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~ 260 (371)
.++. -++.||+.... ...+.+||+++.+....-..+. ....+++.. +++ ||+.....
T Consensus 230 ~i~~d~~G~l~v~~~~--------------~~~i~~~d~~~g~~~~~~~~~~--~~~~~i~~~~dg~~l~v~~~~~---- 289 (314)
T 1pjx_A 230 GMDFDEDNNLLVANWG--------------SSHIEVFGPDGGQPKMRIRCPF--EKPSNLHFKPQTKTIFVTEHEN---- 289 (314)
T ss_dssp EEEEBTTCCEEEEEET--------------TTEEEEECTTCBSCSEEEECSS--SCEEEEEECTTSSEEEEEETTT----
T ss_pred ceEECCCCCEEEEEcC--------------CCEEEEEcCCCCcEeEEEeCCC--CCceeEEECCCCCEEEEEeCCC----
Confidence 2222 35788887521 1468899998554322222221 112233332 444 77765433
Q ss_pred CeEEEEeCCCC
Q 042957 261 GHIESYDGELN 271 (371)
Q Consensus 261 ~~~~~yd~~~~ 271 (371)
+.+.+|+++..
T Consensus 290 ~~l~~~~~~~~ 300 (314)
T 1pjx_A 290 NAVWKFEWQRN 300 (314)
T ss_dssp TEEEEEECSSC
T ss_pred CeEEEEeCCCC
Confidence 25999998753
No 223
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.26 E-value=2.2 Score=37.20 Aligned_cols=147 Identities=10% Similarity=-0.019 Sum_probs=71.0
Q ss_pred cceEEEEECCCCeeeecCCCCCC--CCCeeEEEECC-EEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCc---
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVP--RYDFACTVCDN-KIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLR--- 180 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~--r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~--- 180 (371)
...+..+|+.+.+-...-.++.. +....+..-++ .+|+.+..+ ..+.+||..+.+-...-..+...
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~--------~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS--------ESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT--------TEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC--------CeEEEEECCCCCeEeeEEcCCccccc
Confidence 35688888887765432222221 11222222244 677776532 46999999887643321111100
Q ss_pred -eeeEEEE-ECC-EEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CC-EEEEEcCC
Q 042957 181 -YKCVGVT-WQG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DN-RLFSSGDC 255 (371)
Q Consensus 181 -~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~ 255 (371)
.-..++. -++ .||+............ ......+.+||+.+.+....-... .. ...++.. ++ .||+..
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~---~~~~~~i~v~d~~~~~~~~~~~~~--~~-~~~~~~s~dg~~l~~~~-- 153 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHF---EVQPTRVALYDAETLSRRKAFEAP--RQ-ITMLAWARDGSKLYGLG-- 153 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCE---EECCCEEEEEETTTTEEEEEEECC--SS-CCCEEECTTSSCEEEES--
T ss_pred ccccceEECCCCCEEEEEecccccccccc---cccCceEEEEECCCCcEEEEEeCC--CC-cceeEECCCCCEEEEeC--
Confidence 1112222 244 6777642110000000 000157899999887654332222 11 2234433 34 466662
Q ss_pred CCCccCeEEEEeCCCCceE
Q 042957 256 LKAWKGHIESYDGELNMWD 274 (371)
Q Consensus 256 ~~~~~~~~~~yd~~~~~W~ 274 (371)
..+.+||+.+.+-.
T Consensus 154 -----~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 154 -----RDLHVMDPEAGTLV 167 (337)
T ss_dssp -----SSEEEEETTTTEEE
T ss_pred -----CeEEEEECCCCcEe
Confidence 25999999887654
No 224
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.25 E-value=11 Score=36.49 Aligned_cols=117 Identities=10% Similarity=0.142 Sum_probs=65.9
Q ss_pred EEEECCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCe--eeecCCCCCC---C---CCeeEEEECCE
Q 042957 70 IVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNE--WTRCAPLSVP---R---YDFACTVCDNK 141 (371)
Q Consensus 70 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~---r---~~~~~~~~~~~ 141 (371)
-++.++.||+.... ..++.+|..+.+ |+.-...+.. . ...+.++.+++
T Consensus 64 P~v~~g~vyv~~~~------------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~ 119 (582)
T 1flg_A 64 AIVSDGVIYVTASY------------------------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDK 119 (582)
T ss_dssp CEEETTEEEEEETT------------------------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTE
T ss_pred cEEECCEEEEEcCC------------------------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCE
Confidence 45679999998653 138888887764 8764432211 1 12345668899
Q ss_pred EEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCCCCCCc--eeeEEEEECC------EEEEEecccCCCCCCCCcccc
Q 042957 142 IYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPNMSTLR--YKCVGVTWQG------KIHVVSGFAQRADSDGSVHFT 211 (371)
Q Consensus 142 lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~--~~~~~~~~~~------~lyv~GG~~~~~~~~~~~~~~ 211 (371)
||+... -..+..+|.++. .|+.-..-+... ...+-++.++ .||+ |....+..
T Consensus 120 v~~~t~---------dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~-------- 181 (582)
T 1flg_A 120 VFFGTL---------DASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFG-------- 181 (582)
T ss_dssp EEEEET---------TTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGC--------
T ss_pred EEEEeC---------CCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccC--------
Confidence 988632 146899999887 487532211111 1112234455 5654 32211110
Q ss_pred ccCeeEEEECCCCc--eee
Q 042957 212 ERSSAEVYDTQAGK--WDL 228 (371)
Q Consensus 212 ~~~~v~~yd~~t~~--W~~ 228 (371)
....+..||+++.+ |+.
T Consensus 182 ~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 182 VVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp CBCEEEEECTTTCCEEEEE
T ss_pred CCCEEEEEECCCCCEEeec
Confidence 12578999998764 854
No 225
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=91.12 E-value=6.2 Score=33.20 Aligned_cols=100 Identities=9% Similarity=0.001 Sum_probs=56.2
Q ss_pred ECCEEEEEcCCCCCCCCCCCceEEEEeCCC----CceEe--------CCCCCCC----ceeeEEE-EECCEEEEEecccC
Q 042957 138 CDNKIYVAGGKSNLFSAKGTASAEVYHPEL----DQWTP--------LPNMSTL----RYKCVGV-TWQGKIHVVSGFAQ 200 (371)
Q Consensus 138 ~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t----~~W~~--------~~~~p~~----~~~~~~~-~~~~~lyv~GG~~~ 200 (371)
.++++|+|-|. .+++||..+ +.... .+.+|.. ...++.. ..++++|+|-|
T Consensus 69 ~~g~~~fFkg~----------~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG--- 135 (225)
T 3oyo_A 69 EASEAYVFSGN----------HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG--- 135 (225)
T ss_dssp STTEEEEEETT----------EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET---
T ss_pred CCCeEEEEcCC----------EEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC---
Confidence 47999999764 467776532 22211 1233431 2222222 13789999986
Q ss_pred CCCCCCCccccccCeeEEEECCCCceee----cc-ccccC-----CCCCCeEEE--ECCEEEEEcCCCCCccCeEEEEeC
Q 042957 201 RADSDGSVHFTERSSAEVYDTQAGKWDL----VA-RMWQL-----DIPPNQIVE--VDNRLFSSGDCLKAWKGHIESYDG 268 (371)
Q Consensus 201 ~~~~~~~~~~~~~~~v~~yd~~t~~W~~----~~-~~~~~-----~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~yd~ 268 (371)
+..++||..+++... +. ..+.. .....++.. .++++|++-|. ..++||.
T Consensus 136 -------------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~------~ywr~d~ 196 (225)
T 3oyo_A 136 -------------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ------NYVRIDF 196 (225)
T ss_dssp -------------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT------EEEEEEC
T ss_pred -------------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC------EEEEEeC
Confidence 467888877665443 11 11211 112234444 37899999662 5899998
Q ss_pred C
Q 042957 269 E 269 (371)
Q Consensus 269 ~ 269 (371)
.
T Consensus 197 ~ 197 (225)
T 3oyo_A 197 T 197 (225)
T ss_dssp C
T ss_pred C
Confidence 7
No 226
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=91.09 E-value=7.6 Score=34.20 Aligned_cols=176 Identities=11% Similarity=-0.009 Sum_probs=96.6
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+.++|+.+.+...+.... ..-++++.. ++.||+.-.. ...++++++
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~-------~~p~g~~~d~~~~~ly~~D~~-----------------------~~~I~~~~~ 59 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNL-------RNVVALDTEVASNRIYWSDLS-----------------------QRMICSTQL 59 (316)
T ss_dssp SSEEEEETTSCCCEEEECSC-------SSEEEEEEETTTTEEEEEETT-----------------------TTEEEEEEC
T ss_pred CeEEEEECCCcceEehhcCC-------CceEEEEEEeCCCEEEEEECC-----------------------CCcEEEEEC
Confidence 45788998887765543211 122356655 5789998543 357889988
Q ss_pred CC----Ceeeec-C-CCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC--CCCCCceeeEE
Q 042957 116 KS----NEWTRC-A-PLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP--NMSTLRYKCVG 185 (371)
Q Consensus 116 ~~----~~W~~~-~-~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~ 185 (371)
.. ..-+.+ + .+.. -.++++ .+++||+.-.. ...++++|+....-+.+. .+..+ ..+
T Consensus 60 ~g~~~~~~~~~~~~~~~~~---p~glavd~~~~~ly~~d~~--------~~~I~~~~~~g~~~~~~~~~~~~~P---~~i 125 (316)
T 1ijq_A 60 DRAHGVSSYDTVISRDIQA---PDGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKP---RAI 125 (316)
T ss_dssp --------CEEEECSSCSC---CCEEEEETTTTEEEEEETT--------TTEEEEEETTSSSEEEEEECTTCCE---EEE
T ss_pred CCCCCCcccEEEEeCCCCC---cCEEEEeecCCeEEEEECC--------CCEEEEEeCCCCceEEEEECCCCCc---ceE
Confidence 76 222222 1 1111 134444 47899998332 257889988765433332 22222 233
Q ss_pred EE--ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccC
Q 042957 186 VT--WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKG 261 (371)
Q Consensus 186 ~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~ 261 (371)
++ .++.||+..-.. ...|+++++....-+.+... . .....++++- +++||+.-... .
T Consensus 126 avdp~~g~ly~~d~~~-------------~~~I~~~~~dG~~~~~~~~~-~-~~~P~gla~d~~~~~lY~~D~~~----~ 186 (316)
T 1ijq_A 126 VVDPVHGFMYWTDWGT-------------PAKIKKGGLNGVDIYSLVTE-N-IQWPNGITLDLLSGRLYWVDSKL----H 186 (316)
T ss_dssp EEETTTTEEEEEECSS-------------SCEEEEEETTSCCEEEEECS-S-CSCEEEEEEETTTTEEEEEETTT----T
T ss_pred EeCCCCCEEEEEccCC-------------CCeEEEEcCCCCCeEEEEEC-C-CCCceEEEEeccCCEEEEEECCC----C
Confidence 34 368899876211 14788898875443333211 1 1122356654 68999985433 4
Q ss_pred eEEEEeCCCCceEee
Q 042957 262 HIESYDGELNMWDEV 276 (371)
Q Consensus 262 ~~~~yd~~~~~W~~~ 276 (371)
.|+++|+....-+.+
T Consensus 187 ~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 187 SISSIDVNGGNRKTI 201 (316)
T ss_dssp EEEEEETTSCSCEEE
T ss_pred eEEEEecCCCceEEE
Confidence 699999976444443
No 227
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=91.01 E-value=5 Score=34.53 Aligned_cols=136 Identities=10% Similarity=0.108 Sum_probs=65.4
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCC-eeEE-EECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYD-FACT-VCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
+.+..+|..+++-.+.-.+...... .+++ .-+++.++.|+.+ ..+.+||..+.+-...-.....+ ...
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D--------g~v~iw~~~~~~~~~~~~~h~~~--~~~ 114 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS--------AEVQLWDVQQQKRLRNMTSHSAR--VGS 114 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT--------SEEEEEETTTTEEEEEEECCSSC--EEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC--------CcEEEeecCCceeEEEecCccce--EEE
Confidence 4577888887765543322221111 1222 2367777888875 36888998887543221111111 122
Q ss_pred EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEE-EECCEEEEEcCCCCCccCeEE
Q 042957 186 VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIV-EVDNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~ 264 (371)
...++.+.+.|+.. ..+..++..+............. ....+. ..+++.++.++.+. .+.
T Consensus 115 ~~~~~~~l~s~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~----~i~ 175 (318)
T 4ggc_A 115 LSWNSYILSSGSRS--------------GHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDN----LVN 175 (318)
T ss_dssp EEEETTEEEEEETT--------------SEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTS----CEE
T ss_pred eecCCCEEEEEecC--------------CceEeeecCCCceeEEEEcCccC-ceEEEEEcCCCCEEEEEecCc----cee
Confidence 33344455555432 34455555544332211111111 111121 22456666665544 488
Q ss_pred EEeCCCCc
Q 042957 265 SYDGELNM 272 (371)
Q Consensus 265 ~yd~~~~~ 272 (371)
+||..+.+
T Consensus 176 iwd~~~~~ 183 (318)
T 4ggc_A 176 VWPSAPGE 183 (318)
T ss_dssp EEESSCBT
T ss_pred EEECCCCc
Confidence 99987643
No 228
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.73 E-value=8 Score=33.84 Aligned_cols=103 Identities=8% Similarity=-0.008 Sum_probs=55.4
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE-EECCEEEEEecccCCCCCCCCccccccCeeE
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAE 217 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~ 217 (371)
+++.++.|+.+ ..+.+||..+.+................. .-++++++.|+.+ ..+.
T Consensus 97 ~~~~l~s~~~d--------g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------------g~i~ 154 (368)
T 3mmy_A 97 DGSKVFTASCD--------KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD--------------KTLK 154 (368)
T ss_dssp TSSEEEEEETT--------SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETT--------------SEEE
T ss_pred CCCEEEEEcCC--------CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCC--------------CcEE
Confidence 56666677664 36899999888765543222222211111 2356777777643 4688
Q ss_pred EEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 218 VYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 218 ~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
+||+.+.+-...-.... ....+....+.+++... .. .+.+||....
T Consensus 155 vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~----~i~~~~~~~~ 200 (368)
T 3mmy_A 155 FWDTRSSNPMMVLQLPE---RCYCADVIYPMAVVATA-ER----GLIVYQLENQ 200 (368)
T ss_dssp EECSSCSSCSEEEECSS---CEEEEEEETTEEEEEEG-GG----CEEEEECSSS
T ss_pred EEECCCCcEEEEEecCC---CceEEEecCCeeEEEeC-CC----cEEEEEeccc
Confidence 89988765322222111 11234444554444432 22 4888888764
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=90.61 E-value=14 Score=36.50 Aligned_cols=149 Identities=9% Similarity=-0.026 Sum_probs=80.1
Q ss_pred ccceEEEEECCCCee--eecCCCCC--CCCCeeE-EEECCE-EEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCCCC
Q 042957 106 VLAWVLRYNVKSNEW--TRCAPLSV--PRYDFAC-TVCDNK-IYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPNMS 177 (371)
Q Consensus 106 ~~~~v~~yd~~~~~W--~~~~~~~~--~r~~~~~-~~~~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p 177 (371)
....+++++..+.+= ..+-..+. +.....+ ..-+++ |++...... ..+.++++|..+. .|+.+..-.
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-----~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST-----SGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS-----SCCEEEEEETTSTTCCCEEEECSS
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC-----CCcEEEEEECCCCCCceEEEeCCC
Confidence 346788888766542 12222221 1212222 222454 444333221 1368999998765 677765422
Q ss_pred CCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCC---ceeeccccccCCCCCCeEEEECCEEEEEcC
Q 042957 178 TLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG---KWDLVARMWQLDIPPNQIVEVDNRLFSSGD 254 (371)
Q Consensus 178 ~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~---~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG 254 (371)
..... .....+++||+....... ...++.+|+.+. .|+.+.+-.. ... .+...+++|++...
T Consensus 281 ~~~~~-~~~~~g~~l~~~t~~~~~-----------~~~l~~~d~~~~~~~~~~~l~~~~~--~~~-~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 281 DADVS-LVDNKGSTLYLLTNRDAP-----------NRRLVTVDAANPGPAHWRDLIPERQ--QVL-TVHSGSGYLFAEYM 345 (693)
T ss_dssp SSCEE-EEEEETTEEEEEECTTCT-----------TCEEEEEETTSCCGGGCEEEECCCS--SCE-EEEEETTEEEEEEE
T ss_pred CceEE-EEeccCCEEEEEECCCCC-----------CCEEEEEeCCCCCccccEEEecCCC--CEE-EEEEECCEEEEEEE
Confidence 22222 234568889988754322 257888998764 4776543221 112 45556777766532
Q ss_pred CCCCccCeEEEEeCCCCceEee
Q 042957 255 CLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 255 ~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
.+ ....++++|+.....+.+
T Consensus 346 ~~--g~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 346 VD--ATARVEQFDYEGKRVREV 365 (693)
T ss_dssp ET--TEEEEEEECTTSCEEEEE
T ss_pred EC--CeeEEEEEECCCCeeEEe
Confidence 21 123589999987766665
No 230
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=90.42 E-value=4.6 Score=40.28 Aligned_cols=137 Identities=14% Similarity=-0.044 Sum_probs=74.1
Q ss_pred ceEEEEECCCCeeeecCC--CCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC--CCCCCce
Q 042957 108 AWVLRYNVKSNEWTRCAP--LSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP--NMSTLRY 181 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~--~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~ 181 (371)
..++++++....-+.+.. +..| .++++ .++.||+.--. ....++++++....-+.+. .+..+.
T Consensus 475 ~~I~v~d~dg~~~~~l~~~~~~~P---~giavDp~~g~ly~td~~-------~~~~I~~~~~dG~~~~~l~~~~l~~Pn- 543 (699)
T 1n7d_A 475 GTVSVADTKGVKRKTLFREQGSKP---RAIVVDPVHGFMYWTDWG-------TPAKIKKGGLNGVDIYSLVTENIQWPN- 543 (699)
T ss_dssp SCEEEEBSSSCCEEEECCCSSCCC---CCEECCSSSSCCEECCCS-------SSCCEEBCCSSSCCCCEESCSSCSSCC-
T ss_pred CeEEEEecCCCceEEEEeCCCCCc---ceEEEccCCCcEEEcccC-------CCCeEEEEeCCCCCeeEEEeCCCCCcc-
Confidence 568888887665443322 2222 22333 36778876311 1246777776543322221 122221
Q ss_pred eeEEEE--ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCc
Q 042957 182 KCVGVT--WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAW 259 (371)
Q Consensus 182 ~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~ 259 (371)
.+++ .+++||+.-.. ...|+++|+....-+.+...........++++.++.||+.-...
T Consensus 544 --Glavd~~~~~LY~aD~~--------------~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~--- 604 (699)
T 1n7d_A 544 --GITLDLLSGRLYWVDSK--------------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN--- 604 (699)
T ss_dssp --CEEECTTTCCEEEEETT--------------TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTT---
T ss_pred --EEEEeccCCEEEEEecC--------------CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCC---
Confidence 2333 35789988732 25788999875443444322111122346778899999986433
Q ss_pred cCeEEEEeCCCCceEe
Q 042957 260 KGHIESYDGELNMWDE 275 (371)
Q Consensus 260 ~~~~~~yd~~~~~W~~ 275 (371)
..|.++|+.+.+-..
T Consensus 605 -~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 605 -EAIFSANRLTGSDVN 619 (699)
T ss_dssp -TCEEEEETTTEEEEE
T ss_pred -CeEEEEEccCCCceE
Confidence 359999987655433
No 231
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=90.29 E-value=6.7 Score=32.19 Aligned_cols=103 Identities=11% Similarity=0.019 Sum_probs=56.6
Q ss_pred ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCce---EeCC----CCCCCceeeEEEE-ECCEEEEEecccCCCCCCCCcc
Q 042957 138 CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQW---TPLP----NMSTLRYKCVGVT-WQGKIHVVSGFAQRADSDGSVH 209 (371)
Q Consensus 138 ~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W---~~~~----~~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~ 209 (371)
.++++|+|-|. ..++|+..+... +.+. .+|.....++... .++++|+|-|
T Consensus 60 ~~g~~yfFkg~----------~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG------------ 117 (196)
T 3c7x_A 60 KDGKFVFFKGD----------KHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG------------ 117 (196)
T ss_dssp TTSCEEEEETT----------EEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET------------
T ss_pred CCCcEEEecCC----------EEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC------------
Confidence 46889999664 367777542110 1222 2443333333322 2689999976
Q ss_pred ccccCeeEEEECCCCceee-----ccccccCCCCCCeEEEE-CC-EEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 210 FTERSSAEVYDTQAGKWDL-----VARMWQLDIPPNQIVEV-DN-RLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 210 ~~~~~~v~~yd~~t~~W~~-----~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+..++||..+++-.. +...+.......++... ++ ++|++-| +..++||..+.+
T Consensus 118 ----~~yw~yd~~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFkg------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 118 ----NKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKG------NKYWKFNNQKLK 177 (196)
T ss_dssp ----TEEEEEETTTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEET------TEEEEEETTTTE
T ss_pred ----CEEEEEeCCcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEEC------CEEEEEECCcce
Confidence 457889987764332 11111111112334444 44 8999965 258999988754
No 232
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=90.16 E-value=9.6 Score=34.74 Aligned_cols=139 Identities=6% Similarity=-0.006 Sum_probs=70.3
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
..+..+|..+.+-...-..+........+.+ +++.++.|+.+ ..+.+||..+.+....-.++....-..+
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR--------GIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT--------SCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC--------CeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 5688889877653222111101111122222 67777777775 3588999987654322111111111111
Q ss_pred EEE-----CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccc-c----------cc-------------CC
Q 042957 186 VTW-----QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVAR-M----------WQ-------------LD 236 (371)
Q Consensus 186 ~~~-----~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~-~----------~~-------------~~ 236 (371)
+.. ++++++.|+.+ ..+.+||..+.+-...-. . +. ..
T Consensus 264 ~~~~~~s~~~~~l~s~~~d--------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 329 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSK--------------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSL 329 (437)
T ss_dssp EECTTTCTTEEEEEEESTT--------------EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSG
T ss_pred EeccccCCCccEEEEEcCC--------------CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccC
Confidence 111 34455555433 467888887665221110 0 00 00
Q ss_pred CCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 237 IPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 237 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
.....++..++++++.|+.++ .+.+||+.+.+
T Consensus 330 ~~v~~l~~~~~~~l~s~~~d~----~i~~wd~~~~~ 361 (437)
T 3gre_A 330 NALSTISVSNDKILLTDEATS----SIVMFSLNELS 361 (437)
T ss_dssp GGGCCEEEETTEEEEEEGGGT----EEEEEETTCGG
T ss_pred CceEEEEECCceEEEecCCCC----eEEEEECCCcc
Confidence 001235555888888888655 49999988754
No 233
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=89.84 E-value=9.5 Score=33.41 Aligned_cols=149 Identities=11% Similarity=0.041 Sum_probs=70.9
Q ss_pred cceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCE-EEEEcCCCCCC--------------C----CCCCceEEEEeCC
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNK-IYVAGGKSNLF--------------S----AKGTASAEVYHPE 166 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~-lyv~GG~~~~~--------------~----~~~~~~~~~yd~~ 166 (371)
...+|.+|..+++..++...+. -...+. -+++ |++........ . ......++++|..
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred cceEEEEECCCCceEEEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 4568999998887766644332 111222 2444 44443110000 0 0113568999998
Q ss_pred CCce-EeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE
Q 042957 167 LDQW-TPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV 245 (371)
Q Consensus 167 t~~W-~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~ 245 (371)
+++. +.+.. + . ....+...+.|++.+......... . ....++.+| +.+++.+..- . ..... .-
T Consensus 161 ~~~~~~~l~~-~--~-~~~~~~spdg~~~~~~~~~~~~~~-~----~~~~l~~~d--~~~~~~l~~~---~-~~~~~-sp 224 (347)
T 2gop_A 161 SEEVIEEFEK-P--R-FSSGIWHRDKIVVNVPHREIIPQY-F----KFWDIYIWE--DGKEEKMFEK---V-SFYAV-DS 224 (347)
T ss_dssp TTEEEEEEEE-E--T-TCEEEEETTEEEEEEECCCSSCCS-S----CCEEEEEEE--TTEEEEEEEE---E-SEEEE-EE
T ss_pred CCeEEeeecC-C--C-cccccCCCCeEEEEEecccccccc-c----ccccEEEeC--CCceEEeccC---c-ceeeE-CC
Confidence 8877 55544 3 1 222233333355555332211000 0 024677888 6666665432 1 11122 44
Q ss_pred CCE-EEEEcCCCC---CccCeEEEEeCCCCceEee
Q 042957 246 DNR-LFSSGDCLK---AWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 246 ~~~-iyv~GG~~~---~~~~~~~~yd~~~~~W~~~ 276 (371)
+++ |++.+.... .....++++| +.+++.+
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 554 444442221 1235799999 5666665
No 234
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=89.79 E-value=12 Score=34.33 Aligned_cols=202 Identities=10% Similarity=-0.009 Sum_probs=108.3
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+.+.|+....+..+.... +...+++.. ++.||+.--. ...++++++
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~-------~~~~~l~~d~~~~~lywsD~~-----------------------~~~I~~~~~ 141 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNL-------RNVVALDTEVASNRIYWSDLS-----------------------QRMICSTQL 141 (400)
T ss_dssp TEEEEECTTSCSCEEEECSC-------SCEEEEEEETTTTEEEEEETT-----------------------TTEEEEEEC
T ss_pred ceeEEEccCCcceeEecccc-------CcceEEeeeeccCceEEEecC-----------------------CCeEEEEEc
Confidence 45777787777666553221 122355554 5789987432 356888887
Q ss_pred CCC----eeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC--CCCCCceeeEEEE
Q 042957 116 KSN----EWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP--NMSTLRYKCVGVT 187 (371)
Q Consensus 116 ~~~----~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~~ 187 (371)
... ....+.... ...-.++++ .+++||+.-.. ...++++++....-+.+. .+..++ .+++
T Consensus 142 ~g~~~~~~~~~~~~~~-~~~p~glavD~~~~~lY~~d~~--------~~~I~~~~~~g~~~~~l~~~~~~~P~---~iav 209 (400)
T 3p5b_L 142 DRAHGVSSYDTVISRD-IQAPDGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKPR---AIVV 209 (400)
T ss_dssp ------CCCEEEECSS-CSCEEEEEEETTTTEEEEEETT--------TTEEEEECTTTCSEEEEEECSSCCEE---EEEE
T ss_pred ccCCCCCcceEEEeCC-CCCcccEEEEecCCceEEEECC--------CCeEEEEeCCCCceEEEEeCCCCCcc---eEEE
Confidence 652 122221111 112234444 37899998432 257889998876554442 222222 3334
Q ss_pred --ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeE
Q 042957 188 --WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHI 263 (371)
Q Consensus 188 --~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~ 263 (371)
.++.||+.--.. ...|+++++....-+.+..- .-....++++- +++||+.-.. ...|
T Consensus 210 dp~~g~ly~td~~~-------------~~~I~~~~~dG~~~~~~~~~--~l~~P~glavd~~~~~lY~aD~~----~~~I 270 (400)
T 3p5b_L 210 DPVHGFMYWTDWGT-------------PAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSK----LHSI 270 (400)
T ss_dssp ETTTTEEEEEECSS-------------SCCEEEEETTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEETT----TTEE
T ss_pred ecccCeEEEEeCCC-------------CCEEEEEeCCCCccEEEEEC--CCCceEEEEEEeCCCEEEEEECC----CCEE
Confidence 368899875211 14688888875433333111 11112356555 7899998543 3469
Q ss_pred EEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEc
Q 042957 264 ESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLA 319 (371)
Q Consensus 264 ~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~G 319 (371)
+++|+....-+.+... ...++ ...+++..++.||+..
T Consensus 271 ~~~d~dG~~~~~~~~~-~~~l~------------------~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 271 SSIDVNGGNRKTILED-EKRLA------------------HPFSLAVFEDKVFWTD 307 (400)
T ss_dssp EEEETTSCCCEEEEEC-SSTTS------------------SEEEEEEETTEEEEEE
T ss_pred EEEeCCCCccEEEEeC-CCCCC------------------CCEEEEEeCCEEEEec
Confidence 9999876544444100 01122 2346666788898875
No 235
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.70 E-value=12 Score=34.33 Aligned_cols=141 Identities=13% Similarity=-0.026 Sum_probs=74.3
Q ss_pred eEEEEECCCCe-eeecCCCC--CCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC---CCCCCc
Q 042957 109 WVLRYNVKSNE-WTRCAPLS--VPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP---NMSTLR 180 (371)
Q Consensus 109 ~v~~yd~~~~~-W~~~~~~~--~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~---~~p~~~ 180 (371)
.+++++...+. ...+..+. ....-+.+++. ++.||+.-. ...+++||+.+.....+. ......
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---------~~~I~~~d~~~~~~~~~~~~~~~g~~~ 265 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---------NKNFGRFNVKTQEVTLIKQLELSGSLG 265 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT---------TCEEEEEETTTCCEEEEEECCCCSCCC
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---------CCcEEEEECCCCCEEEEecccccCCCC
Confidence 78999886543 22331111 11112233333 689999422 247999999887655441 111111
Q ss_pred ee-e-EEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecccccc----------C-CCCCCeEEEE
Q 042957 181 YK-C-VGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQ----------L-DIPPNQIVEV 245 (371)
Q Consensus 181 ~~-~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~----------~-~~~~~~~~~~ 245 (371)
.. . .++.. ++.||+.... .+.|.+||+....-........ . -....++++.
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~--------------~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d 331 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQN--------------LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVD 331 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETT--------------TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC
T ss_pred CCccccEEEeCCCCEEEEEeCC--------------CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEe
Confidence 12 1 34443 5889998632 2578888877542111111100 0 0112244443
Q ss_pred -CCEEEEEcC-CCCCccCeEEEEeCCCCceEee
Q 042957 246 -DNRLFSSGD-CLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 246 -~~~iyv~GG-~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
+++||+... .+ ..|.+||+.+.....+
T Consensus 332 ~dG~lyvad~~~~----~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 332 EDGNFYIVDGFKG----YCLRKLDILDGYVSTV 360 (409)
T ss_dssp TTCCEEEEETTTT----CEEEEEETTTTEEEEE
T ss_pred CCCCEEEEeCCCC----CEEEEEECCCCEEEEE
Confidence 567998854 33 3599999777777666
No 236
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.65 E-value=12 Score=34.11 Aligned_cols=133 Identities=12% Similarity=0.007 Sum_probs=71.9
Q ss_pred ceEEEEECCCCeeeecC--CCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee
Q 042957 108 AWVLRYNVKSNEWTRCA--PLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~--~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~ 183 (371)
..++++++....-+.+. .+..| .++++. ++.||+.--. ....++++++....-+.+..-.. ..-.
T Consensus 181 ~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~-------~~~~I~r~~~dG~~~~~~~~~~~-~~Pn 249 (386)
T 3v65_B 181 SRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWG-------NTPRIEASSMDGSGRRIIADTHL-FWPN 249 (386)
T ss_dssp TEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECS-------SSCEEEEEETTSCSCEEEECSSC-SCEE
T ss_pred CeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccC-------CCCEEEEEeCCCCCcEEEEECCC-CCee
Confidence 46788877654322221 12111 234443 6889987321 13679999987543333321111 1112
Q ss_pred EEEE--ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccC
Q 042957 184 VGVT--WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKG 261 (371)
Q Consensus 184 ~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~ 261 (371)
.+++ .+++||+.-. ....|+++|+....-+.+.... ...+.++++.++.||+..-.. .
T Consensus 250 Glavd~~~~~lY~aD~--------------~~~~I~~~d~dG~~~~~~~~~~--~~~P~giav~~~~ly~td~~~----~ 309 (386)
T 3v65_B 250 GLTIDYAGRRMYWVDA--------------KHHVIERANLDGSHRKAVISQG--LPHPFAITVFEDSLYWTDWHT----K 309 (386)
T ss_dssp EEEEEGGGTEEEEEET--------------TTTEEEEECTTSCSCEEEECSS--CSSEEEEEEETTEEEEEETTT----T
T ss_pred eEEEeCCCCEEEEEEC--------------CCCEEEEEeCCCCeeEEEEECC--CCCceEEEEECCEEEEeeCCC----C
Confidence 3333 3789999863 2257899988754323222111 112246777899999985332 3
Q ss_pred eEEEEeCCCC
Q 042957 262 HIESYDGELN 271 (371)
Q Consensus 262 ~~~~yd~~~~ 271 (371)
.|.++|..+.
T Consensus 310 ~V~~~~~~~G 319 (386)
T 3v65_B 310 SINSANKFTG 319 (386)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEECCCC
Confidence 5888885443
No 237
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=89.39 E-value=15 Score=35.58 Aligned_cols=27 Identities=19% Similarity=0.195 Sum_probs=19.4
Q ss_pred CCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 246 DNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 246 ~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
++++++.|+.++ .+.+||..+.....+
T Consensus 459 dg~~lasgs~D~----~v~lwd~~~~~~~~~ 485 (611)
T 1nr0_A 459 DKQFVAVGGQDS----KVHVYKLSGASVSEV 485 (611)
T ss_dssp TSCEEEEEETTS----EEEEEEEETTEEEEE
T ss_pred CCCEEEEeCCCC----eEEEEEccCCceeee
Confidence 567777777554 499999888766544
No 238
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=89.22 E-value=11 Score=32.98 Aligned_cols=104 Identities=7% Similarity=-0.037 Sum_probs=53.0
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe-CCCCCCCceeeEEEE-ECCEEEEEecccCCCCCCCCccccccCee
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP-LPNMSTLRYKCVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSA 216 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v 216 (371)
+++.++.|+.+ ..+.+||..+.+-.. +..-.... ..++. -++.+++.|+.+ ..+
T Consensus 76 dg~~l~s~s~D--------~~v~~wd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~s~D--------------~~i 131 (319)
T 3frx_A 76 DGAYALSASWD--------KTLRLWDVATGETYQRFVGHKSDV--MSVDIDKKASMIISGSRD--------------KTI 131 (319)
T ss_dssp TSSEEEEEETT--------SEEEEEETTTTEEEEEEECCSSCE--EEEEECTTSCEEEEEETT--------------SCE
T ss_pred CCCEEEEEeCC--------CEEEEEECCCCCeeEEEccCCCcE--EEEEEcCCCCEEEEEeCC--------------CeE
Confidence 56677777765 468899988765322 21111111 11122 255666677544 467
Q ss_pred EEEECCCCceeeccccccCCCCCCeEEEE-------CCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 217 EVYDTQAGKWDLVARMWQLDIPPNQIVEV-------DNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 217 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
.+||.+...-..+..... ....+... ++.+++.|+... .+.+||+.+.+-
T Consensus 132 ~vwd~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~l~s~~~d~----~i~~wd~~~~~~ 188 (319)
T 3frx_A 132 KVWTIKGQCLATLLGHND---WVSQVRVVPNEKADDDSVTIISAGNDK----MVKAWNLNQFQI 188 (319)
T ss_dssp EEEETTSCEEEEECCCSS---CEEEEEECCC------CCEEEEEETTS----CEEEEETTTTEE
T ss_pred EEEECCCCeEEEEeccCC---cEEEEEEccCCCCCCCccEEEEEeCCC----EEEEEECCcchh
Confidence 888887554333221110 00112221 233566666544 499999987543
No 239
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=88.95 E-value=20 Score=35.73 Aligned_cols=155 Identities=11% Similarity=-0.025 Sum_probs=75.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCC------CCCCCceEEEEeCCCCce--EeCCCCCC-
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLF------SAKGTASAEVYHPELDQW--TPLPNMST- 178 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~------~~~~~~~~~~yd~~t~~W--~~~~~~p~- 178 (371)
..++++|..+++..... .+.......+..-+..|+.. ..+... .......+++++..+..- ..+-..+.
T Consensus 189 ~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~ 266 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADE-LKWVKFSGLAWLGNDALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL 266 (741)
T ss_dssp EEEEEEETTTCCEEEEE-EEEEESCCCEESTTSEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEEECCCCCCCCcc-CCCceeccEEEECCCEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC
Confidence 57999999998875431 11111111111124334433 332110 011245688888876542 12222221
Q ss_pred CceeeEE-EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCC--c-eeeccccccCCCCCCeEEEECCEEEEEcC
Q 042957 179 LRYKCVG-VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG--K-WDLVARMWQLDIPPNQIVEVDNRLFSSGD 254 (371)
Q Consensus 179 ~~~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~--~-W~~~~~~~~~~~~~~~~~~~~~~iyv~GG 254 (371)
+...... ..-+++..++....... ..+.++.+|+.+. . |..+........ ..+.-.+++||+...
T Consensus 267 ~~~~~~~~~SpDG~~l~~~~~~~~~---------~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~~~~dg~~l~~~s~ 335 (741)
T 1yr2_A 267 PKRGHGASVSSDGRWVVITSSEGTD---------PVNTVHVARVTNGKIGPVTALIPDLKAQW--DFVDGVGDQLWFVSG 335 (741)
T ss_dssp TTCEEEEEECTTSCEEEEEEECTTC---------SCCEEEEEEEETTEECCCEEEECSSSSCE--EEEEEETTEEEEEEC
T ss_pred CeEEEEEEECCCCCEEEEEEEccCC---------CcceEEEEECCCCCCcccEEecCCCCceE--EEEeccCCEEEEEEC
Confidence 1112222 23356533343332211 1257889999877 6 777653222111 122335777877754
Q ss_pred CCCCccCeEEEEeCCC--CceEee
Q 042957 255 CLKAWKGHIESYDGEL--NMWDEV 276 (371)
Q Consensus 255 ~~~~~~~~~~~yd~~~--~~W~~~ 276 (371)
.. .....++++|+++ ..|+.+
T Consensus 336 ~~-~~~~~l~~~d~~~~~~~~~~l 358 (741)
T 1yr2_A 336 DG-APLKKIVRVDLSGSTPRFDTV 358 (741)
T ss_dssp TT-CTTCEEEEEECSSSSCEEEEE
T ss_pred CC-CCCCEEEEEeCCCCccccEEE
Confidence 32 2234699999988 579887
No 240
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=88.81 E-value=12 Score=32.94 Aligned_cols=161 Identities=12% Similarity=0.100 Sum_probs=88.1
Q ss_pred EEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCC-------CCCCC-CeeEEEE
Q 042957 69 SIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPL-------SVPRY-DFACTVC 138 (371)
Q Consensus 69 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~-------~~~r~-~~~~~~~ 138 (371)
.+++. ++.||+..+.. ...+.+||+....-..+... +.... -..+++-
T Consensus 147 ~ia~~~~~g~lyv~d~~~----------------------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d 204 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYC----------------------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALV 204 (329)
T ss_dssp EEEECTTTCCEEEEECSS----------------------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEE
T ss_pred EEEEeCCCCeEEEEeCCC----------------------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEE
Confidence 55555 57899997532 35688898655443333211 11111 2344443
Q ss_pred -C-CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCC-CCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCe
Q 042957 139 -D-NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNM-STLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSS 215 (371)
Q Consensus 139 -~-~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~-p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 215 (371)
+ +.||+..... ..+.+||+.+.+....-.. ........++...+.+|...|...-... ....
T Consensus 205 ~~~g~l~v~d~~~--------~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~-------~~~~ 269 (329)
T 3fvz_A 205 PHLDQLCVADREN--------GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQ-------EPVQ 269 (329)
T ss_dssp TTTTEEEEEETTT--------TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCS-------CCCC
T ss_pred CCCCEEEEEECCC--------CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccC-------CCcE
Confidence 4 8999986442 5799999987665443211 1222222344445777877775322111 2257
Q ss_pred eEEEECCCCceeeccc-cccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCC
Q 042957 216 AEVYDTQAGKWDLVAR-MWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGEL 270 (371)
Q Consensus 216 v~~yd~~t~~W~~~~~-~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~ 270 (371)
+.++|+.+.+....-. .........++++. ++.||+.....+ .|.+|+++.
T Consensus 270 v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~----~I~~~~~~~ 322 (329)
T 3fvz_A 270 GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN----TVWKFTLTE 322 (329)
T ss_dssp EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC----CEEEEEEEE
T ss_pred EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC----EEEEEeCCc
Confidence 8999988887654421 11111112244443 568999865444 488888753
No 241
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.75 E-value=20 Score=35.47 Aligned_cols=151 Identities=11% Similarity=0.026 Sum_probs=79.6
Q ss_pred cceEEEEECCCCeee--ecCCCC-CCCCCeeEEE-ECCE-EEEEcCCCCCCCCCCCceEEEEeCCC------C--ceEeC
Q 042957 107 LAWVLRYNVKSNEWT--RCAPLS-VPRYDFACTV-CDNK-IYVAGGKSNLFSAKGTASAEVYHPEL------D--QWTPL 173 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~--~~~~~~-~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t------~--~W~~~ 173 (371)
...+++++..+.+.+ .+-..+ .+........ -+++ |++...... ...+.++++|..+ . .++.+
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC----DPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS----SSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC----CCccEEEEEECcccccccCCccceEEe
Confidence 456899998877642 221212 1222222222 2444 444433221 1146899999876 3 57766
Q ss_pred CCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCC---ceeeccccccCCCCCCeEEEE-CCEE
Q 042957 174 PNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG---KWDLVARMWQLDIPPNQIVEV-DNRL 249 (371)
Q Consensus 174 ~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~---~W~~~~~~~~~~~~~~~~~~~-~~~i 249 (371)
..-..... ......++.||+.+..... ...++.+|+.+. .|+.+..-..... ...++.. ++++
T Consensus 283 ~~~~~~~~-~~~s~dg~~l~~~s~~~~~-----------~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~l 349 (710)
T 2xdw_A 283 IDNFEGEY-DYVTNEGTVFTFKTNRHSP-----------NYRLINIDFTDPEESKWKVLVPEHEKDV-LEWVACVRSNFL 349 (710)
T ss_dssp ECSSSSCE-EEEEEETTEEEEEECTTCT-----------TCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEEEETTTEE
T ss_pred eCCCCcEE-EEEeccCCEEEEEECCCCC-----------CCEEEEEeCCCCCcccceeccCCCCCCe-EEEEEEEcCCEE
Confidence 54222222 2233456788888754321 257899999875 4776643221111 1234555 7777
Q ss_pred EEEcCCCCCccCeEEEEeCCCCc-eEee
Q 042957 250 FSSGDCLKAWKGHIESYDGELNM-WDEV 276 (371)
Q Consensus 250 yv~GG~~~~~~~~~~~yd~~~~~-W~~~ 276 (371)
++...... ...++++|+.++. .+.+
T Consensus 350 v~~~~~~g--~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 350 VLCYLHDV--KNTLQLHDLATGALLKIF 375 (710)
T ss_dssp EEEEEETT--EEEEEEEETTTCCEEEEE
T ss_pred EEEEEECC--EEEEEEEECCCCCEEEec
Confidence 77654322 2358999985543 4555
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.69 E-value=11 Score=32.59 Aligned_cols=124 Identities=15% Similarity=0.204 Sum_probs=60.5
Q ss_pred ceEEEEECC-CCeeeecCCCCCCCCCeeEEEE-CCEEEEEcCCCCCCCCCCCceEEEEeCCC-CceEeCCCCCCCceeeE
Q 042957 108 AWVLRYNVK-SNEWTRCAPLSVPRYDFACTVC-DNKIYVAGGKSNLFSAKGTASAEVYHPEL-DQWTPLPNMSTLRYKCV 184 (371)
Q Consensus 108 ~~v~~yd~~-~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~W~~~~~~p~~~~~~~ 184 (371)
..+++||+. ...|+.....+ ...+.+.. ++.||+.. .+ ..++.||+.. ..|+... +..... .
T Consensus 117 ~~l~~~d~~g~~~~~~~~~~~---~~~~~~~~~~g~l~vgt-~~--------~~l~~~d~~g~~~~~~~~--~~~~~~-~ 181 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFKTKKA---IYATPIVSEDGTIYVGS-ND--------NYLYAINPDGTEKWRFKT--NDAITS-A 181 (330)
T ss_dssp SEEEEECTTSCEEEEEECSSC---CCSCCEECTTSCEEEEC-TT--------SEEEEECTTSCEEEEEEC--SSCCCS-C
T ss_pred CEEEEEcCCCCEEEEEcCCCc---eeeeeEEcCCCEEEEEc-CC--------CEEEEECCCCCEeEEEec--CCCcee-e
Confidence 457888887 23465432211 11222333 66777642 21 3588888872 2355432 222221 2
Q ss_pred EEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCC-CceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccC
Q 042957 185 GVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQA-GKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKG 261 (371)
Q Consensus 185 ~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t-~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~ 261 (371)
.+. .++.||+.. ..+.+||... ..|+..... ....+++.. ++.||+... . .
T Consensus 182 ~~~d~~g~l~v~t-----------------~~l~~~d~~g~~~~~~~~~~----~~~~~~~~~~~g~l~v~t~-~----~ 235 (330)
T 3hxj_A 182 ASIGKDGTIYFGS-----------------DKVYAINPDGTEKWNFYAGY----WTVTRPAISEDGTIYVTSL-D----G 235 (330)
T ss_dssp CEECTTCCEEEES-----------------SSEEEECTTSCEEEEECCSS----CCCSCCEECTTSCEEEEET-T----T
T ss_pred eEEcCCCEEEEEe-----------------CEEEEECCCCcEEEEEccCC----cceeceEECCCCeEEEEcC-C----C
Confidence 223 366777654 1467788432 245544221 112234444 447777532 1 2
Q ss_pred eEEEEeCCCCc
Q 042957 262 HIESYDGELNM 272 (371)
Q Consensus 262 ~~~~yd~~~~~ 272 (371)
.+.+||+....
T Consensus 236 gl~~~~~~g~~ 246 (330)
T 3hxj_A 236 HLYAINPDGTE 246 (330)
T ss_dssp EEEEECTTSCE
T ss_pred eEEEECCCCCE
Confidence 48888875544
No 243
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=88.58 E-value=17 Score=34.45 Aligned_cols=108 Identities=6% Similarity=0.088 Sum_probs=53.7
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEE
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEV 218 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~ 218 (371)
+++.++.|+.+ ..+.+||.....-+.+........ .....-++++++.++.+ ..+..
T Consensus 396 dg~~l~~~~~d--------~~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~d~~~l~~~~~d--------------~~v~~ 452 (577)
T 2ymu_A 396 DGQTIASASDD--------KTVKLWNRNGQLLQTLTGHSSSVW-GVAFSPDDQTIASASDD--------------KTVKL 452 (577)
T ss_dssp TSSCEEEEETT--------SEEEEECTTCCEEEEEECCSSCEE-EEEECTTSSEEEEEETT--------------SEEEE
T ss_pred CCCEEEEEeCC--------CEEEEEeCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEcCC--------------CEEEE
Confidence 56666676654 357788754433333322111111 11112356666666533 46788
Q ss_pred EECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 219 YDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 219 yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
||.....-..+.... ....+++.. ++++++.++.+. .+.+||.....-..+
T Consensus 453 w~~~~~~~~~~~~~~---~~v~~~~~spd~~~las~~~d~----~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 453 WNRNGQLLQTLTGHS---SSVRGVAFSPDGQTIASASDDK----TVKLWNRNGQLLQTL 504 (577)
T ss_dssp EETTSCEEEEEECCS---SCEEEEEECTTSCEEEEEETTS----EEEEEETTSCEEEEE
T ss_pred EECCCCEEEEEcCCC---CCEEEEEEcCCCCEEEEEeCCC----EEEEEcCCCCEEEEE
Confidence 887554433332111 111123332 667777776544 488898765444443
No 244
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=88.50 E-value=3.2 Score=38.06 Aligned_cols=107 Identities=6% Similarity=-0.020 Sum_probs=56.9
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCC-CCceeeEEEE-ECCEEEEEecccCCCCCCCCccccccCee
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMS-TLRYKCVGVT-WQGKIHVVSGFAQRADSDGSVHFTERSSA 216 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v 216 (371)
++.+++.|+.+ ..+.+||..+.+-...-..+ ....-.+++. -++++++.|+.+ ..+
T Consensus 181 ~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d--------------g~i 238 (437)
T 3gre_A 181 EKSLLVALTNL--------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR--------------GII 238 (437)
T ss_dssp SCEEEEEEETT--------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT--------------SCE
T ss_pred CCCEEEEEeCC--------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC--------------CeE
Confidence 47777787765 46899999876543221111 1111112222 256677777544 468
Q ss_pred EEEECCCCceeeccccccCCCCCCeEEEE-----CCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 217 EVYDTQAGKWDLVARMWQLDIPPNQIVEV-----DNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 217 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
.+||+++.+....-...... ....++.. ++++++.|+.+. .+.+||+.+.+
T Consensus 239 ~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~s~~~~~l~s~~~dg----~i~iwd~~~~~ 294 (437)
T 3gre_A 239 DIWDIRFNVLIRSWSFGDHA-PITHVEVCQFYGKNSVIVVGGSSKT----FLTIWNFVKGH 294 (437)
T ss_dssp EEEETTTTEEEEEEBCTTCE-EEEEEEECTTTCTTEEEEEEESTTE----EEEEEETTTTE
T ss_pred EEEEcCCccEEEEEecCCCC-ceEEEEeccccCCCccEEEEEcCCC----cEEEEEcCCCc
Confidence 89999886543322111110 00112111 345666666544 49999998765
No 245
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=88.36 E-value=9.3 Score=31.26 Aligned_cols=152 Identities=11% Similarity=0.065 Sum_probs=75.6
Q ss_pred eEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceE--eC----CCCCCCceeeEEEE-ECCEEEEEecccCCCCC
Q 042957 134 ACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD--QWT--PL----PNMSTLRYKCVGVT-WQGKIHVVSGFAQRADS 204 (371)
Q Consensus 134 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~--~~----~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~ 204 (371)
+++..++++|+|-|. .+++++.... ... .+ +.||.... ++... .++++|+|-|
T Consensus 11 Ai~~~~g~~yfFkg~----------~~Wr~~~~~~~~~~~p~~Is~~w~glP~~ID-Aa~~~~~~~~~yfFkG------- 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKDG----------KYWRFSEGRGSRPQGPFLIADKWPALPRKLD-SVFEEPLSKKLFFFSG------- 72 (195)
T ss_dssp EEEEETTEEEEEETT----------EEEEECCSSSCCCEEEEEHHHHCTTSCSSCS-EEEECTTTCCEEEEET-------
T ss_pred EEEEeCCEEEEEECC----------EEEEEECCccccCCCcEEhhhccCCCCCCcc-EEEEECCCCeEEEEeC-------
Confidence 455679999999664 3566655431 111 11 34554332 22222 2688999986
Q ss_pred CCCccccccCeeEEEECCCCce-eeccc--cccCCCCCCeEEE-ECCEEEEEcCCCCCccCeEEEEeCCCCceEeecCcc
Q 042957 205 DGSVHFTERSSAEVYDTQAGKW-DLVAR--MWQLDIPPNQIVE-VDNRLFSSGDCLKAWKGHIESYDGELNMWDEVNGSC 280 (371)
Q Consensus 205 ~~~~~~~~~~~v~~yd~~t~~W-~~~~~--~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~ 280 (371)
+..++|+..+..- +.+.. +|.......++.. .++++|+|-| +..++||..+++-..- .+
T Consensus 73 ---------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg------~~ywr~d~~~~~~~~g--yP 135 (195)
T 1itv_A 73 ---------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG------RRLWRFDVKAQMVDPR--SA 135 (195)
T ss_dssp ---------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET------TEEEEEETTTTEECGG--GC
T ss_pred ---------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC------CEEEEEeCCcccccCC--Cc
Confidence 3456666432110 11111 2211111222222 3679999965 2589999887542210 00
Q ss_pred cccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 281 LQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 281 ~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
..+. +.|+-.+..-.++...++++|++-|. ..+.||..+.
T Consensus 136 -r~i~----------~~w~Gvp~~idaa~~~~g~~Yffkg~-----------~y~~~~~~~~ 175 (195)
T 1itv_A 136 -SEVD----------RMFPGVPLDTHDVFQFREKAYFCQDR-----------FYWRVSSRSE 175 (195)
T ss_dssp -EEHH----------HHSTTSCSSCSEEEEETTEEEEEETT-----------EEEEEECCTT
T ss_pred -cChh----------hcCCCCCCCCCEEEEeCCeEEEEeCC-----------EEEEEECCcc
Confidence 0110 01221112233455557899998764 4567887654
No 246
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=88.30 E-value=15 Score=33.60 Aligned_cols=135 Identities=13% Similarity=-0.021 Sum_probs=74.0
Q ss_pred ceEEEEECCCCeeeecC--CCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee
Q 042957 108 AWVLRYNVKSNEWTRCA--PLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~--~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~ 183 (371)
..++++++....-+.+. .+..| .++++ .++.||+.--. ....++++++....-+.+..-.. ..-.
T Consensus 181 ~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~-------~~~~I~~~~~dG~~~~~~~~~~l-~~P~ 249 (400)
T 3p5b_L 181 GTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-------TPAKIKKGGLNGVDIYSLVTENI-QWPN 249 (400)
T ss_dssp TEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECS-------SSCCEEEEETTSCSCEEEECSSC-SCEE
T ss_pred CeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCC-------CCCEEEEEeCCCCccEEEEECCC-CceE
Confidence 56888888766543332 22222 23444 36889987311 12468888886543333211111 1112
Q ss_pred EEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccC
Q 042957 184 VGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKG 261 (371)
Q Consensus 184 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~ 261 (371)
.+++- +++||+.-. ....|+.+|+....-+.+.........+.++++.++.||+..-.. .
T Consensus 250 glavd~~~~~lY~aD~--------------~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~----~ 311 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDS--------------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN----E 311 (400)
T ss_dssp EEEEETTTTEEEEEET--------------TTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSS----C
T ss_pred EEEEEeCCCEEEEEEC--------------CCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCC----C
Confidence 33333 688999863 225789999876544444322111112236788899999986332 3
Q ss_pred eEEEEeCCCC
Q 042957 262 HIESYDGELN 271 (371)
Q Consensus 262 ~~~~yd~~~~ 271 (371)
.|+++|..+.
T Consensus 312 ~V~~~~~~~G 321 (400)
T 3p5b_L 312 AIFSANRLTG 321 (400)
T ss_dssp SEEEEESSSC
T ss_pred eEEEEEcCCC
Confidence 5888886543
No 247
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=88.22 E-value=13 Score=32.71 Aligned_cols=140 Identities=8% Similarity=-0.039 Sum_probs=68.4
Q ss_pred ceEEEEECCCCeeeecCCCCCC-CCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceE--eCCCCCCCceeeE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVP-RYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWT--PLPNMSTLRYKCV 184 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~--~~~~~p~~~~~~~ 184 (371)
..+..||..+.+-..+...... ........-++.+++.|+.+ ..+.+||..+.+-. .+.. .....-..
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d--------g~i~iwd~~~~~~~~~~~~~-~h~~~v~~ 219 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD--------GILDVYNLSSPDQASSRFPV-DEEAKIKE 219 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT--------SCEEEEESSCTTSCCEECCC-CTTSCEEE
T ss_pred CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC--------CEEEEEECCCCCCCccEEec-cCCCCEEE
Confidence 4678888887765433222211 12222223367888888875 36899999876532 2221 01111112
Q ss_pred EEE-ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCcee-eccccccCCCCCC--eEEEE-CCEEEEEcCC-CCC
Q 042957 185 GVT-WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWD-LVARMWQLDIPPN--QIVEV-DNRLFSSGDC-LKA 258 (371)
Q Consensus 185 ~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~-~~~~~~~~~~~~~--~~~~~-~~~iyv~GG~-~~~ 258 (371)
++. -+++.++.|+ . +.+.+||+++.+-. .+........... .++.. +++.++.++. .+
T Consensus 220 l~fs~~g~~l~s~~-~--------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~- 283 (343)
T 3lrv_A 220 VKFADNGYWMVVEC-D--------------QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN- 283 (343)
T ss_dssp EEECTTSSEEEEEE-S--------------SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT-
T ss_pred EEEeCCCCEEEEEe-C--------------CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC-
Confidence 222 2555666664 2 36888999876421 1221111111111 13332 4566666433 22
Q ss_pred ccCeEEEEeC--CCCceEe
Q 042957 259 WKGHIESYDG--ELNMWDE 275 (371)
Q Consensus 259 ~~~~~~~yd~--~~~~W~~ 275 (371)
.+.+|+. ....|..
T Consensus 284 ---~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 284 ---SLTIYKFDKKTKNWTK 299 (343)
T ss_dssp ---EEEEEEECTTTCSEEE
T ss_pred ---cEEEEEEcccccceEe
Confidence 3555554 6677987
No 248
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=88.12 E-value=12 Score=32.35 Aligned_cols=150 Identities=10% Similarity=-0.014 Sum_probs=74.4
Q ss_pred ceEEEEECCCCeeeecCCCCCC----CCCeeEEEECCEEEEE----cCCCC-----CCCCCCCceEEEEeCCCCceEeCC
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVP----RYDFACTVCDNKIYVA----GGKSN-----LFSAKGTASAEVYHPELDQWTPLP 174 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~----r~~~~~~~~~~~lyv~----GG~~~-----~~~~~~~~~~~~yd~~t~~W~~~~ 174 (371)
..+.+||+. ++.+.+...... +-...++.-+++||+. |-... .........+++||+.+++.+.+.
T Consensus 107 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 107 RAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp TEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 457888875 555544321111 1122222237888885 32210 001112357999999888877654
Q ss_pred CCCCCceeeEEEE-ECC-EEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecccccc-CCCCCCeEEE-ECCEEE
Q 042957 175 NMSTLRYKCVGVT-WQG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQ-LDIPPNQIVE-VDNRLF 250 (371)
Q Consensus 175 ~~p~~~~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~-~~~~~~~~~~-~~~~iy 250 (371)
..... ..++. -++ .||+........ ....+++||...+.......... ......+++. -++.||
T Consensus 186 --~~~~p-~gl~~spdg~~lyv~~~~~~~~---------~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw 253 (305)
T 3dr2_A 186 --DLDHP-NGLAFSPDEQTLYVSQTPEQGH---------GSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW 253 (305)
T ss_dssp --EESSE-EEEEECTTSSEEEEEECCC------------CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE
T ss_pred --cCCCC-cceEEcCCCCEEEEEecCCcCC---------CCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE
Confidence 11111 12232 244 588876422111 12478889887654221111110 0111224443 356788
Q ss_pred EEcCCCCCccCeEEEEeCCCCceEee
Q 042957 251 SSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 251 v~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
+..+ ..+.+||++......+
T Consensus 254 v~~~------~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 254 SSSG------TGVCVFDSDGQLLGHI 273 (305)
T ss_dssp ECCS------SEEEEECTTSCEEEEE
T ss_pred EecC------CcEEEECCCCCEEEEE
Confidence 7642 2499999987666655
No 249
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=87.89 E-value=15 Score=33.25 Aligned_cols=105 Identities=7% Similarity=0.048 Sum_probs=58.5
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCC--ce-EeCCC--CCCC--ceeeEEEE-ECCEEEEEecccCCCCCCCCccc
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELD--QW-TPLPN--MSTL--RYKCVGVT-WQGKIHVVSGFAQRADSDGSVHF 210 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W-~~~~~--~p~~--~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~ 210 (371)
++++|+|-|. ..++|+.... .+ +.+.. +|.. ...++... .++++|+|-|
T Consensus 236 ~g~~~fFkg~----------~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG------------- 292 (365)
T 3ba0_A 236 RNQVFLFKDD----------KYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD------------- 292 (365)
T ss_dssp GTEEEEEETT----------EEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------------
T ss_pred CCEEEEEeCC----------EEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------------
Confidence 7899999664 3566654321 11 23332 3432 22222222 2589999976
Q ss_pred cccCeeEEEECCCCceee-----ccc-cccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCceEe
Q 042957 211 TERSSAEVYDTQAGKWDL-----VAR-MWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 211 ~~~~~v~~yd~~t~~W~~-----~~~-~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~ 275 (371)
+..++||..+++-.. +.. .+.......++... ++++|+|-| +..++||..+.+-..
T Consensus 293 ---~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 293 ---NQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG------SNQFEYDFLLQRITK 355 (365)
T ss_dssp ---TEEEEEETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET------TEEEEEETTTTEEEE
T ss_pred ---CEEEEEeCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC------CEEEEEECCccEEec
Confidence 467889987665332 100 11111122345555 889999965 258999998876554
No 250
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=87.65 E-value=8.9 Score=33.79 Aligned_cols=133 Identities=12% Similarity=-0.016 Sum_probs=69.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCC----ceee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTL----RYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~----~~~~ 183 (371)
..+++||+.+++...... + ......+..-++++++... ..+++||+.+.+.+.+...+.. +...
T Consensus 71 ~~i~~~d~~~~~~~~~~~-~-~~v~~i~~~~dg~l~v~~~----------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~ 138 (326)
T 2ghs_A 71 RELHELHLASGRKTVHAL-P-FMGSALAKISDSKQLIASD----------DGLFLRDTATGVLTLHAELESDLPGNRSND 138 (326)
T ss_dssp TEEEEEETTTTEEEEEEC-S-SCEEEEEEEETTEEEEEET----------TEEEEEETTTCCEEEEECSSTTCTTEEEEE
T ss_pred CEEEEEECCCCcEEEEEC-C-CcceEEEEeCCCeEEEEEC----------CCEEEEECCCCcEEEEeeCCCCCCCCCCCC
Confidence 568999998887654431 2 1112222334788887631 2489999998888766443221 1112
Q ss_pred EEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-CC-EEEEEcCCCCCccC
Q 042957 184 VGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DN-RLFSSGDCLKAWKG 261 (371)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~ 261 (371)
..+.-++++|+......... ....++++| +.+...+..- .. ...+++.. ++ .+|+..... .
T Consensus 139 i~~d~~G~l~v~~~~~~~~~--------~~~~l~~~~--~g~~~~~~~~--~~-~~~~i~~s~dg~~lyv~~~~~----~ 201 (326)
T 2ghs_A 139 GRMHPSGALWIGTMGRKAET--------GAGSIYHVA--KGKVTKLFAD--IS-IPNSICFSPDGTTGYFVDTKV----N 201 (326)
T ss_dssp EEECTTSCEEEEEEETTCCT--------TCEEEEEEE--TTEEEEEEEE--ES-SEEEEEECTTSCEEEEEETTT----C
T ss_pred EEECCCCCEEEEeCCCcCCC--------CceEEEEEe--CCcEEEeeCC--Cc-ccCCeEEcCCCCEEEEEECCC----C
Confidence 22223677876432111000 124688888 4555443211 11 11234433 33 577764322 3
Q ss_pred eEEEEeCC
Q 042957 262 HIESYDGE 269 (371)
Q Consensus 262 ~~~~yd~~ 269 (371)
.+++||..
T Consensus 202 ~I~~~d~~ 209 (326)
T 2ghs_A 202 RLMRVPLD 209 (326)
T ss_dssp EEEEEEBC
T ss_pred EEEEEEcc
Confidence 59999975
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=87.20 E-value=4.8 Score=39.37 Aligned_cols=125 Identities=11% Similarity=0.224 Sum_probs=70.0
Q ss_pred EEEECCEEEEEecccCCCCCCCCccccccCeeEEEEC-CCC--ceeeccccccC-----C--CCCCeEEE--ECCE----
Q 042957 185 GVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDT-QAG--KWDLVARMWQL-----D--IPPNQIVE--VDNR---- 248 (371)
Q Consensus 185 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~-~t~--~W~~~~~~~~~-----~--~~~~~~~~--~~~~---- 248 (371)
-++.+++||+.... ...++++|. ++. .|+.-...... + ....++++ .+++
T Consensus 58 P~v~~g~vyv~~~~--------------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~r 123 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF--------------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPAL 123 (599)
T ss_dssp CEEETTEEEEECST--------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCE
T ss_pred cEEECCEEEEEeCC--------------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeE
Confidence 35679999998742 146899999 776 48765433211 0 01123555 5777
Q ss_pred EEEEcCCCCCccCeEEEEeCCCCc--eEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeeccc
Q 042957 249 LFSSGDCLKAWKGHIESYDGELNM--WDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGE 326 (371)
Q Consensus 249 iyv~GG~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~ 326 (371)
||+.... ..++.+|.++.+ |+.-. ...... .....+-++.+++||+-.+..+.
T Consensus 124 V~v~t~d-----g~l~AlDa~TG~~~W~~~~----~~~~~~--------------~~~~ssP~v~~g~V~vg~~g~e~-- 178 (599)
T 1w6s_A 124 ILKTQLD-----GNVAALNAETGETVWKVEN----SDIKVG--------------STLTIAPYVVKDKVIIGSSGAEL-- 178 (599)
T ss_dssp EEEECTT-----SEEEEEETTTCCEEEEEEC----CCGGGT--------------CBCCSCCEEETTEEEECCBCGGG--
T ss_pred EEEEcCC-----CEEEEEECCCCCEEEeecC----CCCCcc--------------ceeecCCEEECCEEEEEeccccc--
Confidence 8775431 259999987764 87541 110000 01112223457887663321110
Q ss_pred ccceeeEEEEeecccccccccccC
Q 042957 327 LARTMSMVHIFDTAAKSDAWRSFE 350 (371)
Q Consensus 327 ~~~~~~~v~~~d~~~~~~~W~~~~ 350 (371)
.....|+.||.++.+..|+.-.
T Consensus 179 --g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 179 --GVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp --TCCCEEEEEETTTCCEEEEEES
T ss_pred --CCCCeEEEEECCCCcEEEEEcC
Confidence 1245789999998767787653
No 252
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=86.60 E-value=26 Score=34.50 Aligned_cols=104 Identities=11% Similarity=-0.031 Sum_probs=53.5
Q ss_pred eEEEEeCCC-CceEeCCCC-CCCce-eeEEEEECCE-EEEEecccCCCCCCCCccccccCeeEEEECCCCceeecccccc
Q 042957 159 SAEVYHPEL-DQWTPLPNM-STLRY-KCVGVTWQGK-IHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQ 234 (371)
Q Consensus 159 ~~~~yd~~t-~~W~~~~~~-p~~~~-~~~~~~~~~~-lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~ 234 (371)
.++++|..+ .+-..+... ..... ..... -+++ |++....... ....++.+|+.+.+...+.....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~----------~~~~i~~~d~~~g~~~~~~~~~~ 332 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ----------KKLDLVEVTLASNQQRVLAHETS 332 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS----------SEEEEEEEETTTCCEEEEEEEEC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC----------CeEEEEEEECCCCceEEEEEcCC
Confidence 788889887 765544321 11111 11222 4444 5444432221 12578999999988766543222
Q ss_pred CCC--CCCeEE-EECCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 235 LDI--PPNQIV-EVDNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 235 ~~~--~~~~~~-~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
... ....++ .-++++++.+.... ...++.+|.... ...+
T Consensus 333 ~~~~~~~~~~~~spdg~~~~~~~~~g--~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 333 PTWVPLHNSLRFLDDGSILWSSERTG--FQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp SSCCCCCSCCEECTTSCEEEEECTTS--SCEEEEECSSSC-EEES
T ss_pred CCcCCcCCceEECCCCeEEEEecCCC--ccEEEEEcCCCC-eeee
Confidence 111 011222 23666666654432 246888887766 5555
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=86.36 E-value=13 Score=36.07 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=67.3
Q ss_pred eEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC--ceEeCCCCCCC---ce---eeEEEEECCEEEEEecccCCCCCC
Q 042957 134 ACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD--QWTPLPNMSTL---RY---KCVGVTWQGKIHVVSGFAQRADSD 205 (371)
Q Consensus 134 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~---~~---~~~~~~~~~~lyv~GG~~~~~~~~ 205 (371)
+-++.+++||+.... ..++.+|.++. .|+.-...+.. .+ ....++.+++||+..
T Consensus 63 ~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t--------- 124 (582)
T 1flg_A 63 QAIVSDGVIYVTASY---------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT--------- 124 (582)
T ss_dssp CCEEETTEEEEEETT---------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE---------
T ss_pred ccEEECCEEEEEcCC---------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe---------
Confidence 345689999998653 23889998876 48764433221 11 123356889998754
Q ss_pred CCccccccCeeEEEECCCCc--eeeccccccCC-CCCCeEEEECC------EEEEEcCCC--CCccCeEEEEeCCCCc--
Q 042957 206 GSVHFTERSSAEVYDTQAGK--WDLVARMWQLD-IPPNQIVEVDN------RLFSSGDCL--KAWKGHIESYDGELNM-- 272 (371)
Q Consensus 206 ~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~-~~~~~~~~~~~------~iyv~GG~~--~~~~~~~~~yd~~~~~-- 272 (371)
....++++|.++.+ |+.-...+... ....+.++.++ .||+ |... ......++.||+++.+
T Consensus 125 ------~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~ 197 (582)
T 1flg_A 125 ------LDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEI 197 (582)
T ss_dssp ------TTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEE
T ss_pred ------CCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEE
Confidence 12478999998875 87543221111 11122334455 5554 3321 1123469999998754
Q ss_pred eEe
Q 042957 273 WDE 275 (371)
Q Consensus 273 W~~ 275 (371)
|+.
T Consensus 198 W~~ 200 (582)
T 1flg_A 198 WMR 200 (582)
T ss_dssp EEE
T ss_pred eec
Confidence 865
No 254
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=86.29 E-value=19 Score=32.60 Aligned_cols=144 Identities=11% Similarity=0.131 Sum_probs=78.7
Q ss_pred ceeEEeCCCCceeccCCCCcccccccc-------cceEEEEE----CCEEEEEcCcccccCCCCCCCCCCcccccccccc
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVL-------KGFSIVSL----GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVL 107 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r-------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (371)
-+++.+-.-.+|+.+......+....+ ...+++.. .+.||+.+- .
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------------------------~ 137 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------------------------P 137 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------------------------T
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------------------------C
Confidence 477777777889988642110000001 12234443 467777532 2
Q ss_pred ceEEEEECCCCeeeecCCC---CC--------------CCCCeeEEEE---CCEEEEEcCCCCCCCCCCCceEEEEeCCC
Q 042957 108 AWVLRYNVKSNEWTRCAPL---SV--------------PRYDFACTVC---DNKIYVAGGKSNLFSAKGTASAEVYHPEL 167 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~---~~--------------~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 167 (371)
..+++.+-...+|+++..+ |. ...-++++.. .+.||+.... ..+++.+...
T Consensus 138 ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~---------ggl~~s~DgG 208 (394)
T 3b7f_A 138 QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS---------GGVFESTDAG 208 (394)
T ss_dssp TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET---------BEEEEESSTT
T ss_pred CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC---------CCEEEECCCC
Confidence 3578887778899987432 21 1111233332 2567775332 2377777778
Q ss_pred CceEeCCC------CCC-----CceeeEEEEEC---CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccc
Q 042957 168 DQWTPLPN------MST-----LRYKCVGVTWQ---GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVAR 231 (371)
Q Consensus 168 ~~W~~~~~------~p~-----~~~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 231 (371)
.+|+.+.. +|. ....+.++... +.||+... ..+++.+-...+|+.+..
T Consensus 209 ~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~----------------~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 209 TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH----------------CGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET----------------TEEEEEETTTTEEECGGG
T ss_pred CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC----------------CeEEEeCCCCCcceECCC
Confidence 89998753 121 12223333332 66776431 357788888899998864
No 255
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=85.77 E-value=4.1 Score=34.34 Aligned_cols=61 Identities=8% Similarity=-0.002 Sum_probs=36.9
Q ss_pred CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceee-----cc-ccccCC-----CCCCeEEE--ECCEEEEEcCC
Q 042957 189 QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDL-----VA-RMWQLD-----IPPNQIVE--VDNRLFSSGDC 255 (371)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~-----~~-~~~~~~-----~~~~~~~~--~~~~iyv~GG~ 255 (371)
++++|+|-| +..++||..+++-.. +. .+|... ....++.. .++++|++-|.
T Consensus 129 ~~k~yfFkG----------------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~ 192 (227)
T 3lp9_A 129 GKEVYLFKG----------------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD 192 (227)
T ss_dssp TTEEEEEET----------------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT
T ss_pred CCEEEEEEC----------------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC
Confidence 689999986 467888887554321 11 122110 12234443 35899999662
Q ss_pred CCCccCeEEEEeCCCC
Q 042957 256 LKAWKGHIESYDGELN 271 (371)
Q Consensus 256 ~~~~~~~~~~yd~~~~ 271 (371)
..++||..+.
T Consensus 193 ------~Ywr~d~~~~ 202 (227)
T 3lp9_A 193 ------HYARVKVTPX 202 (227)
T ss_dssp ------EEEEEECCSS
T ss_pred ------EEEEEECCcc
Confidence 5889998775
No 256
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=85.01 E-value=35 Score=34.50 Aligned_cols=135 Identities=14% Similarity=-0.042 Sum_probs=75.5
Q ss_pred cceEEEEECCCCeeeecC--CCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCcee
Q 042957 107 LAWVLRYNVKSNEWTRCA--PLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYK 182 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~--~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~ 182 (371)
...++++++....-+.+. .+..| .++++ .++.||+.--. ....|+++++....-+.+..- ....
T Consensus 492 ~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g-------~~~~I~~~~~dG~~~~~lv~~--~l~~ 559 (791)
T 3m0c_C 492 LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-------TPAKIKKGGLNGVDIYSLVTE--NIQW 559 (791)
T ss_dssp TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS-------SSCEEEEEETTSCCEEEEECS--SCSC
T ss_pred CCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecCC-------CCCeEEEEecCCCceEEEEeC--CCCC
Confidence 357889988766544432 22222 24444 36899987311 125788998876544433221 1112
Q ss_pred e-EEEE--ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCc
Q 042957 183 C-VGVT--WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAW 259 (371)
Q Consensus 183 ~-~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~ 259 (371)
+ .+++ .+++||+.-. ....|+++|+....-..+...........++++.+++||+.--..
T Consensus 560 P~GLavD~~~~~LYwaD~--------------~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~--- 622 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDS--------------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN--- 622 (791)
T ss_dssp EEEEEEETTTTEEEEEET--------------TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTT---
T ss_pred ceEEEEecCCCeEEEEeC--------------CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCC---
Confidence 2 2333 3689999853 225789999876544433221111111236778899999985433
Q ss_pred cCeEEEEeCCCC
Q 042957 260 KGHIESYDGELN 271 (371)
Q Consensus 260 ~~~~~~yd~~~~ 271 (371)
..|+++|..+.
T Consensus 623 -~~I~~~dk~tG 633 (791)
T 3m0c_C 623 -EAIFSANRLTG 633 (791)
T ss_dssp -TEEEEEETTTC
T ss_pred -CEEEEEeCCCC
Confidence 35787776544
No 257
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=84.67 E-value=24 Score=32.40 Aligned_cols=127 Identities=10% Similarity=0.111 Sum_probs=71.9
Q ss_pred CCCeeee--cCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeC------CCCce-EeCCC-CCCCceeeEE
Q 042957 116 KSNEWTR--CAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHP------ELDQW-TPLPN-MSTLRYKCVG 185 (371)
Q Consensus 116 ~~~~W~~--~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~------~t~~W-~~~~~-~p~~~~~~~~ 185 (371)
..+.|+. ++..|..-.-|+.+.+++.-|++|=..++ .....+-++-. -...- +.++. +......+.+
T Consensus 268 ~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGD---v~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCv 344 (670)
T 3ju4_A 268 HKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGD---VAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCI 344 (670)
T ss_dssp TTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECS---SSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEE
T ss_pred ccCCceecccccccceeeeeeeeEecCCceEEEeccCC---CCcceeeEEEecccccCCcceeeeechhhhccccccchh
Confidence 4456754 34445444568888898888888755432 22333333211 11122 23332 2222334444
Q ss_pred EEECCEEEEEe-cccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcC
Q 042957 186 VTWQGKIHVVS-GFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGD 254 (371)
Q Consensus 186 ~~~~~~lyv~G-G~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG 254 (371)
-.+++.||+.- |..... .-..+.+-+..-..|+.+.-........-..+..++.||+||-
T Consensus 345 kyYdgvLyLtTRgt~~~~---------~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 345 KYYDGVLYLITRGTRGDR---------LGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp EEETTEEEEEEEESCTTS---------CCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred hhhCCEEEEEecCcCCCC---------CcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 57899999986 333322 2356777777788899885433222222247789999999983
No 258
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=84.65 E-value=34 Score=34.02 Aligned_cols=104 Identities=16% Similarity=0.034 Sum_probs=61.5
Q ss_pred CceEEEEeCCCC--c-eEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCC--Cceeeccc
Q 042957 157 TASAEVYHPELD--Q-WTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQA--GKWDLVAR 231 (371)
Q Consensus 157 ~~~~~~yd~~t~--~-W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t--~~W~~~~~ 231 (371)
.+.++++|..+. . |+.+..-....... +...++.||+...... ....++.+|+.+ ..|+.+-+
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~-----------~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGA-----------PLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTC-----------TTCEEEEEECSSSSCEEEEEEC
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCC-----------CCCEEEEEeCCCCccccEEEec
Confidence 468999998876 6 87775433333222 2345777887764322 125789999988 57887643
Q ss_pred cccCCCCCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 232 MWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 232 ~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
-... ....+...+++|++....+. ...++++|+....-+.+
T Consensus 361 ~~~~--~l~~~~~~~~~lv~~~~~dg--~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 361 ESKD--NLESVGIAGNRLFASYIHDA--KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp CCSS--EEEEEEEEBTEEEEEEEETT--EEEEEEEETTSCEEEEC
T ss_pred CCCC--eEEEEEEECCEEEEEEEECC--EEEEEEEeCCCCceeec
Confidence 2211 11234455888887754322 23588888765544444
No 259
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=84.63 E-value=18 Score=32.71 Aligned_cols=20 Identities=15% Similarity=0.328 Sum_probs=13.9
Q ss_pred CCEEEEEcCCCCCccCeEEEEeCCC
Q 042957 246 DNRLFSSGDCLKAWKGHIESYDGEL 270 (371)
Q Consensus 246 ~~~iyv~GG~~~~~~~~~~~yd~~~ 270 (371)
++++++.|+. . .+.+||+.+
T Consensus 296 ~g~~l~~~~~-~----~v~iwd~~~ 315 (447)
T 3dw8_B 296 SGRYMMTRDY-L----SVKVWDLNM 315 (447)
T ss_dssp TSSEEEEEES-S----EEEEEETTC
T ss_pred CCCEEEEeeC-C----eEEEEeCCC
Confidence 5566666654 3 599999975
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.57 E-value=22 Score=31.77 Aligned_cols=133 Identities=12% Similarity=0.008 Sum_probs=74.2
Q ss_pred ceEEEEECCCCeeeecC--CCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee
Q 042957 108 AWVLRYNVKSNEWTRCA--PLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~--~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~ 183 (371)
..++++++....-+.+. .+..| .++++. ++.||+.--.. ...++++++....-+.+..-.. ..-.
T Consensus 138 ~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~~~~~-~~Pn 206 (349)
T 3v64_C 138 SRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIADTHL-FWPN 206 (349)
T ss_dssp TEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEESCCSSC-SCEE
T ss_pred CeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC-------CCEEEEEeCCCCCcEEEEECCC-CCcc
Confidence 57888888765433321 22222 234443 68899873211 3679999987654444422111 1112
Q ss_pred EEEE--ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccC
Q 042957 184 VGVT--WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKG 261 (371)
Q Consensus 184 ~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~ 261 (371)
.+++ .+++||+.-. ....|+++|+....-+.+.... ...+.++++.++.||+..-.. .
T Consensus 207 Gla~d~~~~~lY~aD~--------------~~~~I~~~~~dG~~~~~~~~~~--~~~P~giav~~~~ly~td~~~----~ 266 (349)
T 3v64_C 207 GLTIDYAGRRMYWVDA--------------KHHVIERANLDGSHRKAVISQG--LPHPFAITVFEDSLYWTDWHT----K 266 (349)
T ss_dssp EEEEETTTTEEEEEET--------------TTTEEEEEETTSCSCEEEECSS--CSSEEEEEEETTEEEEEETTT----T
T ss_pred eEEEeCCCCEEEEEEC--------------CCCEEEEEeCCCCceEEEEeCC--CCCceEEEEECCEEEEecCCC----C
Confidence 3333 3788999863 1257899998754333322111 112346777899999985433 3
Q ss_pred eEEEEeCCCC
Q 042957 262 HIESYDGELN 271 (371)
Q Consensus 262 ~~~~yd~~~~ 271 (371)
.|.++|..+.
T Consensus 267 ~V~~~~~~~G 276 (349)
T 3v64_C 267 SINSANKFTG 276 (349)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEEccCC
Confidence 5888885443
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.43 E-value=22 Score=31.73 Aligned_cols=200 Identities=14% Similarity=0.073 Sum_probs=110.4
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+.++|+.......+.... ....+++.. ++.||+.--. ...++++++
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~-------~~~~~l~~d~~~~~ly~~D~~-----------------------~~~I~r~~~ 102 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNL-------ENAIALDFHHRRELVFWSDVT-----------------------LDRILRANL 102 (349)
T ss_dssp SCEEEECTTSCCEEEEECSC-------SCEEEEEEETTTTEEEEEETT-----------------------TTEEEEEET
T ss_pred cceEEEeCCCCeeEEeecCC-------CceEEEEEeccccEEEEEecc-----------------------CCceEEEec
Confidence 44777888776665543221 112355544 5789887422 357899998
Q ss_pred CCCeeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC--CCCCCceeeEEEEE--C
Q 042957 116 KSNEWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP--NMSTLRYKCVGVTW--Q 189 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~~~~~~~~~--~ 189 (371)
....-+.+...... .-.++++ .+++||+.-.. ...++++++....-+.+. .+..+ ..+++. +
T Consensus 103 ~g~~~~~~~~~~~~-~p~glavd~~~g~ly~~d~~--------~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~ 170 (349)
T 3v64_C 103 NGSNVEEVVSTGLE-SPGGLAVDWVHDKLYWTDSG--------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPME 170 (349)
T ss_dssp TSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTT
T ss_pred CCCCceEEEeCCCC-CccEEEEecCCCeEEEEcCC--------CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCc
Confidence 87765443221111 1123444 47899988432 257889988765433332 22222 233343 6
Q ss_pred CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEe
Q 042957 190 GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYD 267 (371)
Q Consensus 190 ~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd 267 (371)
+.||+..-.. ...|+++++....-+.+... ......++++- +++||+.-... ..|+++|
T Consensus 171 g~ly~td~~~-------------~~~I~r~~~dG~~~~~~~~~--~~~~PnGla~d~~~~~lY~aD~~~----~~I~~~~ 231 (349)
T 3v64_C 171 GTIYWTDWGN-------------TPRIEASSMDGSGRRIIADT--HLFWPNGLTIDYAGRRMYWVDAKH----HVIERAN 231 (349)
T ss_dssp TEEEEEECSS-------------SCEEEEEETTSCSCEESCCS--SCSCEEEEEEETTTTEEEEEETTT----TEEEEEE
T ss_pred CeEEEeccCC-------------CCEEEEEeCCCCCcEEEEEC--CCCCcceEEEeCCCCEEEEEECCC----CEEEEEe
Confidence 8899886211 14789999876543333211 11112356654 78999985433 3699999
Q ss_pred CCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEc
Q 042957 268 GELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLA 319 (371)
Q Consensus 268 ~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~G 319 (371)
+....-+.+-. ..+. .-.+++..++.||+..
T Consensus 232 ~dG~~~~~~~~---~~~~------------------~P~giav~~~~ly~td 262 (349)
T 3v64_C 232 LDGSHRKAVIS---QGLP------------------HPFAITVFEDSLYWTD 262 (349)
T ss_dssp TTSCSCEEEEC---SSCS------------------SEEEEEEETTEEEEEE
T ss_pred CCCCceEEEEe---CCCC------------------CceEEEEECCEEEEec
Confidence 87644333310 1222 2245555788898874
No 262
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=84.21 E-value=22 Score=31.66 Aligned_cols=142 Identities=7% Similarity=-0.129 Sum_probs=73.3
Q ss_pred cceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCce--eeE
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRY--KCV 184 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~--~~~ 184 (371)
...+..+|+.+.+-......... .......-++++++.++.+ .+.+++..+.............. ...
T Consensus 156 d~~i~iwd~~~~~~~~~~~~~~~-V~~v~fspdg~~l~s~s~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~v 225 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIETRGE-VKDLHFSTDGKVVAYITGS---------SLEVISTVTGSCIARKTDFDKNWSLSKI 225 (365)
T ss_dssp SCEEEEEETTTTEEEEEEECSSC-CCEEEECTTSSEEEEECSS---------CEEEEETTTCCEEEEECCCCTTEEEEEE
T ss_pred CCEEEEeECCCCcEEEEeCCCCc-eEEEEEccCCceEEeccce---------eEEEEEeccCcceeeeecCCCCCCEEEE
Confidence 35677888887765433221111 1222222366666665532 36677777665443222211111 122
Q ss_pred EEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccc--cccCCCCCCeEEE-ECCEEEEEcCCCCCccC
Q 042957 185 GVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVAR--MWQLDIPPNQIVE-VDNRLFSSGDCLKAWKG 261 (371)
Q Consensus 185 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~--~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~ 261 (371)
...-+++.++.++..... ...+..+|........... +........+++. -++++++.|+.+.
T Consensus 226 ~fspdg~~l~~~s~d~~~----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~---- 291 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGK----------GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN---- 291 (365)
T ss_dssp EEEETTEEEEEEEESSSC----------CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS----
T ss_pred EEcCCCCEEEEEecCCcc----------eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC----
Confidence 234578888877655432 1356677777665543321 1111111112222 2778888887665
Q ss_pred eEEEEeCCCCc
Q 042957 262 HIESYDGELNM 272 (371)
Q Consensus 262 ~~~~yd~~~~~ 272 (371)
.|.+||..+.+
T Consensus 292 ~V~iwd~~~~~ 302 (365)
T 4h5i_A 292 SIALVKLKDLS 302 (365)
T ss_dssp CEEEEETTTTE
T ss_pred EEEEEECCCCc
Confidence 49999998754
No 263
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=83.53 E-value=25 Score=32.91 Aligned_cols=149 Identities=13% Similarity=0.073 Sum_probs=74.3
Q ss_pred eEEEECCEEEEEcCCCCCCCCCCCceEEEEeCC---------CCceEeCCCCCCCceeeEEEE-ECCEEEEEecccCCCC
Q 042957 134 ACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPE---------LDQWTPLPNMSTLRYKCVGVT-WQGKIHVVSGFAQRAD 203 (371)
Q Consensus 134 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~---------t~~W~~~~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~~ 203 (371)
+++...+++|+|-|.- .++++.. +..|.. +|... .++... .++++|+|=|
T Consensus 267 Ai~~~~ge~y~Fkg~~----------~wr~~~~~~~~~p~~I~~~Wp~---LP~~i-DAa~~~~~~g~~~fFKg------ 326 (450)
T 1su3_A 267 AITTIRGEVMFFKDRF----------YMRTNPFYPEVELNFISVFWPQ---LPNGL-EAAYEFADRDEVRFFKG------ 326 (450)
T ss_dssp EEEEETTEEEEEETTE----------EEECCTTSSSCEEEEGGGTCTT---SCSSC-CEEEEEGGGTEEEEEET------
T ss_pred eEEecCCeEEEEeCCE----------EEEEcCCCCcccceehhHhccC---CCCCe-eEEEEEcCCCeEEEEeC------
Confidence 5566899999997742 3333332 234433 34332 222222 3689999876
Q ss_pred CCCCccccccCeeEEEECCCC--ce-eecc---ccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCceEe
Q 042957 204 SDGSVHFTERSSAEVYDTQAG--KW-DLVA---RMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 204 ~~~~~~~~~~~~v~~yd~~t~--~W-~~~~---~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~ 275 (371)
+.+++|+..+. .+ +.+. .+|.......++... ++++|+|-| +..|+||..+++-..
T Consensus 327 ----------~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG------~~yw~yd~~~~~~~~ 390 (450)
T 1su3_A 327 ----------NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA------NKYWRYDEYKRSMDP 390 (450)
T ss_dssp ----------TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET------TEEEEEETTTTEECS
T ss_pred ----------CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC------CEEEEEeCCCccccC
Confidence 34556653221 00 1111 122211122344443 589999966 259999987643221
Q ss_pred ecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 276 VNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 276 ~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
+.+ ..+. +.||-.+..--+++..++++|+|=|. ..|.||..+.
T Consensus 391 --gYP-k~I~----------~~fpgip~~iDAA~~~~g~~YFFkg~-----------~ywr~d~~~~ 433 (450)
T 1su3_A 391 --GYP-KMIA----------HDFPGIGHKVDAVFMKDGFFYFFHGT-----------RQYKFDPKTK 433 (450)
T ss_dssp --SCS-EEHH----------HHSTTSCSCCSEEEEETTEEEEEETT-----------EEEEEETTTT
T ss_pred --CCC-cchh----------hcCCCCCCCccEEEEcCCeEEEEeCC-----------EEEEEECCcc
Confidence 000 1110 01221122223444568899998664 4567887654
No 264
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=83.36 E-value=1.1 Score=40.96 Aligned_cols=66 Identities=12% Similarity=0.077 Sum_probs=32.8
Q ss_pred EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc--eeeccccccCCCCCCeEEEECCEEEEEcCCCCCccCeE
Q 042957 186 VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK--WDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKGHI 263 (371)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 263 (371)
++.++.||+.+. ...+.++|.++++ |+... .+. ....+..++++|+.+.... .+
T Consensus 6 ~v~~~~v~~gs~---------------dg~v~a~d~~tG~~~W~~~~---~~~--~s~p~~~~g~~~v~~s~dg----~l 61 (369)
T 2hz6_A 6 TLPETLLFVSTL---------------DGSLHAVSKRTGSIKWTLKE---DPV--LQVPTHVEEPAFLPDPNDG----SL 61 (369)
T ss_dssp --CTTEEEEEET---------------TSEEEEEETTTCCEEEEEEC---CCS--CCCC-----CCEEECTTTC----CE
T ss_pred eeeCCEEEEEcC---------------CCEEEEEECCCCCEEEEecC---CCc--eecceEcCCCEEEEeCCCC----EE
Confidence 456777776552 2478999988764 76543 111 1233445677888765443 49
Q ss_pred EEEeCCCC--ceEe
Q 042957 264 ESYDGELN--MWDE 275 (371)
Q Consensus 264 ~~yd~~~~--~W~~ 275 (371)
+++|.++. .|+.
T Consensus 62 ~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 62 YTLGSKNNEGLTKL 75 (369)
T ss_dssp EEC-----CCSEEC
T ss_pred EEEECCCCceeeee
Confidence 99998654 4553
No 265
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=82.65 E-value=19 Score=32.15 Aligned_cols=142 Identities=12% Similarity=-0.026 Sum_probs=70.7
Q ss_pred ceEEEEeCCCCceEeCCCCCCCceeeEEE-EECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCC
Q 042957 158 ASAEVYHPELDQWTPLPNMSTLRYKCVGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLD 236 (371)
Q Consensus 158 ~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~ 236 (371)
..+.+||+.+.+......-.... ..++ .-++++++.++ .+.+.+++..+..-..........
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~V--~~v~fspdg~~l~s~s---------------~~~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGEV--KDLHFSTDGKVVAYIT---------------GSSLEVISTVTGSCIARKTDFDKN 219 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSCC--CEEEECTTSSEEEEEC---------------SSCEEEEETTTCCEEEEECCCCTT
T ss_pred CEEEEeECCCCcEEEEeCCCCce--EEEEEccCCceEEecc---------------ceeEEEEEeccCcceeeeecCCCC
Confidence 46888999887654322111111 1222 23566666663 135677777776543322111111
Q ss_pred CCCCeEE-EECCEEEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeE-eeeCCe
Q 042957 237 IPPNQIV-EVDNRLFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTM-APIGTH 314 (371)
Q Consensus 237 ~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~-~~~~~~ 314 (371)
.....++ .-+++.++.++........++.+|........... ..+... ...-.++ +.-+++
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~---~~~~~~--------------~~~V~~~~~Spdg~ 282 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRS---KQVTNR--------------FKGITSMDVDMKGE 282 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEE---EEEESS--------------CSCEEEEEECTTSC
T ss_pred CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceee---eeecCC--------------CCCeEeEEECCCCC
Confidence 1111222 34778777776544333357777777666554310 111110 0111122 223678
Q ss_pred EEEEcceeecccccceeeEEEEeecccc
Q 042957 315 LYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 315 l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
+++.|+.+. .|.+||.++.
T Consensus 283 ~lasgs~D~---------~V~iwd~~~~ 301 (365)
T 4h5i_A 283 LAVLASNDN---------SIALVKLKDL 301 (365)
T ss_dssp EEEEEETTS---------CEEEEETTTT
T ss_pred ceEEEcCCC---------EEEEEECCCC
Confidence 888887643 6788888754
No 266
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=81.03 E-value=33 Score=31.32 Aligned_cols=105 Identities=11% Similarity=0.018 Sum_probs=56.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+..+|+.+.+ .+..++... ..+ ++.. +..+|+........ ......+.+.++|+
T Consensus 59 ~~V~ViD~~t~~--v~~~I~vG~-----~P~-va~spDG~~lyVan~~~~r~--------------~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 59 TQQFVIDGEAGR--VIGMIDGGF-----LPN-PVVADDGSFIAHASTVFSRI--------------ARGERTDYVEVFDP 116 (386)
T ss_dssp EEEEEEETTTTE--EEEEEEECS-----SCE-EEECTTSSCEEEEEEEEEET--------------TEEEEEEEEEEECT
T ss_pred CEEEEEECCCCe--EEEEEECCC-----CCc-EEECCCCCEEEEEccccccc--------------ccCCCCCEEEEEEC
Confidence 679999998877 333333221 123 4444 35688875321000 01123567999999
Q ss_pred CCCeeeecCCCCC-CC-----CCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceE
Q 042957 116 KSNEWTRCAPLSV-PR-----YDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWT 171 (371)
Q Consensus 116 ~~~~W~~~~~~~~-~r-----~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~ 171 (371)
.+.+-..--+++. .| .-+.+++ -+.++|+.... ..+.+.+.|..+.+-.
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-------~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-------PAPAVGVVDLEGKAFK 173 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-------SSCEEEEEETTTTEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-------CCCeEEEEECCCCcEE
Confidence 9887433211121 11 2222333 35678887322 1357999999987543
No 267
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=80.60 E-value=24 Score=33.09 Aligned_cols=162 Identities=12% Similarity=0.021 Sum_probs=71.0
Q ss_pred cceEEEEECCCC----eeeecCC---C----CCCCCCeeEEEECCEEEEE--cCCCCCCCCCCCceEEEEeCCCCceEe-
Q 042957 107 LAWVLRYNVKSN----EWTRCAP---L----SVPRYDFACTVCDNKIYVA--GGKSNLFSAKGTASAEVYHPELDQWTP- 172 (371)
Q Consensus 107 ~~~v~~yd~~~~----~W~~~~~---~----~~~r~~~~~~~~~~~lyv~--GG~~~~~~~~~~~~~~~yd~~t~~W~~- 172 (371)
.+.++++|..++ +-.++-. + ...+-++..+.-++ |||. |+.. ......+.++|.++.+-..
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~----g~~~g~v~vlD~~T~~v~~~ 179 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEE----GEGPGGILMLDHYSFEPLGK 179 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETT----SCSCCEEEEECTTTCCEEEE
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcC----CCCCCeEEEEECCCCeEEEE
Confidence 578999998776 3322211 1 11121222333455 7773 3322 1235789999999865332
Q ss_pred CC--CCCCCceeeEEEEECCEEEEEeccc------CCCCCCCCccccccCeeEEEECCCCceeeccccccCC--CCCCeE
Q 042957 173 LP--NMSTLRYKCVGVTWQGKIHVVSGFA------QRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLD--IPPNQI 242 (371)
Q Consensus 173 ~~--~~p~~~~~~~~~~~~~~lyv~GG~~------~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~--~~~~~~ 242 (371)
.+ ..+.....-....-++++++..-+. .......... ...+.|..||..+.+ .+..+.... .....+
T Consensus 180 ~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~-~~~d~V~v~D~~~~k--~~~tI~vg~~g~~P~~i 256 (462)
T 2ece_A 180 WEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKD-RYGNRIHFWDLRKRK--RIHSLTLGEENRMALEL 256 (462)
T ss_dssp CCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHH-HSCCEEEEEETTTTE--EEEEEESCTTEEEEEEE
T ss_pred EccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhh-ccCCEEEEEECCCCc--EeeEEecCCCCCcccee
Confidence 11 1121111111112344444444211 1000000000 134789999999863 333332211 111112
Q ss_pred EE--E--CCEEEEEcCC-CCCccCeEEEEeCCCCceEee
Q 042957 243 VE--V--DNRLFSSGDC-LKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 243 ~~--~--~~~iyv~GG~-~~~~~~~~~~yd~~~~~W~~~ 276 (371)
.. . +..+|+..-. .....+.+++|..+..+|+.+
T Consensus 257 ~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~ 295 (462)
T 2ece_A 257 RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAE 295 (462)
T ss_dssp EECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEE
T ss_pred EeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEE
Confidence 11 1 4466766431 111223466655556788776
No 268
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=80.51 E-value=28 Score=30.12 Aligned_cols=162 Identities=12% Similarity=0.038 Sum_probs=78.6
Q ss_pred eeEEeCCCCceeccCCCCcccccccccceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCC
Q 042957 40 LASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSN 118 (371)
Q Consensus 40 ~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 118 (371)
+++||+.+.+...+...+. .+.....+.. ++.+|+.-. ....+|++|+.+.
T Consensus 97 v~~~d~~~g~~~~~~~~~~-----~~~~~g~~~~~~~~~~v~d~-----------------------~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPD-----AIFLNGITPLSDTQYLTADS-----------------------YRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEECTTSCEEEEEECTT-----CSCEEEEEESSSSEEEEEET-----------------------TTTEEEEEETTTT
T ss_pred EEEEcCCCCeEEEEEeCCC-----ccccCcccccCCCcEEEEEC-----------------------CCCeEEEEeCCCC
Confidence 6778877777665554431 1222344433 455666521 1357899998764
Q ss_pred e---eeecCC----CCC-C-CCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCC-Cce---EeCCCCCCCceeeEE
Q 042957 119 E---WTRCAP----LSV-P-RYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPEL-DQW---TPLPNMSTLRYKCVG 185 (371)
Q Consensus 119 ~---W~~~~~----~~~-~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~W---~~~~~~p~~~~~~~~ 185 (371)
+ |...+. .+. . .....+..-++.||+.--. ...+.+||... .+. +....+..++ ..+
T Consensus 149 ~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~--------~~~I~~~~~~~~g~~~~~~~~~~~~~P~--gi~ 218 (306)
T 2p4o_A 149 SGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTE--------KMLLLRIPVDSTDKPGEPEIFVEQTNID--DFA 218 (306)
T ss_dssp EEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETT--------TTEEEEEEBCTTSCBCCCEEEEESCCCS--SEE
T ss_pred cEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCC--------CCEEEEEEeCCCCCCCccEEEeccCCCC--CeE
Confidence 2 211111 111 1 1112333345688887322 35799998864 221 1111111111 112
Q ss_pred EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-----CCEEEEEcC
Q 042957 186 VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-----DNRLFSSGD 254 (371)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-----~~~iyv~GG 254 (371)
+--+++||+.... .+.|.+||+. .+...+...+.+.....+++.- ++.||+...
T Consensus 219 vd~dG~l~va~~~--------------~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 219 FDVEGNLYGATHI--------------YNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EBTTCCEEEECBT--------------TCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ECCCCCEEEEeCC--------------CCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 2236788887632 2568899986 4443332222221122234432 267888754
No 269
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=80.29 E-value=59 Score=33.76 Aligned_cols=97 Identities=13% Similarity=0.015 Sum_probs=52.6
Q ss_pred ceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeE-EEECCCCceeeccccccCC
Q 042957 158 ASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAE-VYDTQAGKWDLVARMWQLD 236 (371)
Q Consensus 158 ~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~-~yd~~t~~W~~~~~~~~~~ 236 (371)
..++.++..+.....+...+..+....... +++.+++++. . ..++ .||..+..-..+. ....
T Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~---~-----------~~l~~~~d~~~~~~~~l~--~~~~ 379 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR---E-----------GDFLGIYDYRTGKAEKFE--ENLG 379 (1045)
T ss_dssp TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET---T-----------EEEEEEEETTTCCEEECC--CCCC
T ss_pred CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC---C-----------CceEEEEECCCCCceEec--CCcc
Confidence 357888887776655543222122222223 6654444432 1 3677 8999887655554 1111
Q ss_pred CCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 237 IPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 237 ~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
....++.. +++.++++... ..++++|+++.+-..+
T Consensus 380 -~~~~~~~SpDG~~la~~~~~----~~v~~~d~~tg~~~~~ 415 (1045)
T 1k32_A 380 -NVFAMGVDRNGKFAVVANDR----FEIMTVDLETGKPTVI 415 (1045)
T ss_dssp -SEEEEEECTTSSEEEEEETT----SEEEEEETTTCCEEEE
T ss_pred -ceeeeEECCCCCEEEEECCC----CeEEEEECCCCceEEe
Confidence 11122222 55655555433 2699999998877666
No 270
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=79.99 E-value=25 Score=29.29 Aligned_cols=101 Identities=11% Similarity=0.128 Sum_probs=53.3
Q ss_pred EEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCC-ce-----EeCC---CCCCC--ceeeEEEE---ECCEEEEEecccC
Q 042957 135 CTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELD-QW-----TPLP---NMSTL--RYKCVGVT---WQGKIHVVSGFAQ 200 (371)
Q Consensus 135 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~-~W-----~~~~---~~p~~--~~~~~~~~---~~~~lyv~GG~~~ 200 (371)
+...++++|+|-|. .+++|+..++ +- +.+. .+|.. ....-+|. .++++|+|-|
T Consensus 68 A~~~~~~~yfFkG~----------~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--- 134 (219)
T 1hxn_A 68 AFSWEDKLYLIQDT----------KVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--- 134 (219)
T ss_dssp EEEETTEEEEEETT----------EEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET---
T ss_pred EEEECCcEEEecCC----------EEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC---
Confidence 33458999999664 4788886532 11 1111 23332 11122232 2689999986
Q ss_pred CCCCCCCccccccCeeEEEECCCC---ceeeccccccCCCCCCeEEE------------ECCEEEEEcCCCCCccCeEEE
Q 042957 201 RADSDGSVHFTERSSAEVYDTQAG---KWDLVARMWQLDIPPNQIVE------------VDNRLFSSGDCLKAWKGHIES 265 (371)
Q Consensus 201 ~~~~~~~~~~~~~~~v~~yd~~t~---~W~~~~~~~~~~~~~~~~~~------------~~~~iyv~GG~~~~~~~~~~~ 265 (371)
+..+.||..+. .|...+.++ ....++.. .++.+|++-|. ..++
T Consensus 135 -------------~~ywr~d~~~~P~~i~~~~~g~p---~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg~------~y~r 192 (219)
T 1hxn_A 135 -------------RRLWWLDLKSGAQATWTELPWPH---EKVDGALCMEKPLGPNSCSTSGPNLYLIHGP------NLYC 192 (219)
T ss_dssp -------------TEEEEEEGGGGGGCCCEEECCSC---SCCSEEEEESSCSSSCCSCSSSCEEEEEETT------EEEE
T ss_pred -------------CEEEEEeCCCCceEhhhcCCCCC---CCcCEEEEccccccccceeccCCeEEEEECC------EEEE
Confidence 45688886542 233222221 11223333 34678988663 4677
Q ss_pred EeCCC
Q 042957 266 YDGEL 270 (371)
Q Consensus 266 yd~~~ 270 (371)
||..+
T Consensus 193 ~~~~~ 197 (219)
T 1hxn_A 193 YRHVD 197 (219)
T ss_dssp ESSHH
T ss_pred EeCCc
Confidence 76643
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=79.81 E-value=8.5 Score=35.72 Aligned_cols=133 Identities=9% Similarity=-0.073 Sum_probs=69.5
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-E-CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceE---eCCCCCCCcee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-C-DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWT---PLPNMSTLRYK 182 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~---~~~~~p~~~~~ 182 (371)
..+.+||+..++...+... ...-..+++ . ++.||+...... .....+..++.. ..|. .++.+..+
T Consensus 159 ~~I~~id~~~~~v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~~----~~~~~v~~~~~~-g~~~~~~~l~~~~~p--- 228 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSG--LSKVRTICWTHEADSMIITNDQNN----NDRPNNYILTRE-SGFKVITELTKGQNC--- 228 (430)
T ss_dssp EEEEEEETTTTEEEEEECC--CSCEEEEEECTTSSEEEEEECCSC----TTSEEEEEEEGG-GTSCSEEEEEECSSC---
T ss_pred CcEEEEECCCCEEEEEecC--CCCcceEEEeCCCCEEEEEeCCCC----cccceEEEEeCC-CceeeeeeeccCCCc---
Confidence 6789999998887766431 111122332 2 345998854321 112345666643 2332 22222222
Q ss_pred eEEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE-C-CEEEEEcCCCCC
Q 042957 183 CVGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-D-NRLFSSGDCLKA 258 (371)
Q Consensus 183 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~ 258 (371)
+.+++. ++.||+.--. ...+++||+.+..-..+...+.... ...++.. + +.||+..-..
T Consensus 229 ~giavdp~~g~lyv~d~~--------------~~~V~~~~~~~~~~~~~~~~~~~~~-P~gia~~pdG~~lyv~d~~~-- 291 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWN--------------AGQVFRYDFTTQETTPLFTIQDSGW-EFHIQFHPSGNYAYIVVVNQ-- 291 (430)
T ss_dssp CCEEECTTTCCEEEEETT--------------TTEEEEEETTTTEEEEEEECSSSSC-CEEEEECTTSSEEEEEETTT--
T ss_pred eEEEEeCCCCEEEEEECC--------------CCEEEEEECCCCcEEEEEEcCCCCc-ceeEEEcCCCCEEEEEECCC--
Confidence 223333 6789987631 2578999998776534433332222 2245543 3 4589884332
Q ss_pred ccCeEEEEeCC
Q 042957 259 WKGHIESYDGE 269 (371)
Q Consensus 259 ~~~~~~~yd~~ 269 (371)
+.|++|+..
T Consensus 292 --~~I~~~~~d 300 (430)
T 3tc9_A 292 --HYILRSDYD 300 (430)
T ss_dssp --TEEEEEEEE
T ss_pred --CEEEEEeCC
Confidence 358887655
No 272
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=79.20 E-value=51 Score=32.42 Aligned_cols=155 Identities=10% Similarity=0.002 Sum_probs=79.1
Q ss_pred cceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCC-----CCCCCCceEEEEeCCCCce--EeCCCCCC-
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNL-----FSAKGTASAEVYHPELDQW--TPLPNMST- 178 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~-----~~~~~~~~~~~yd~~t~~W--~~~~~~p~- 178 (371)
...++++|..+++..... ++..+....+.. +++-+++...+.. ........+++++..+..= ..+-..+.
T Consensus 154 ~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~ 231 (693)
T 3iuj_A 154 WREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPA 231 (693)
T ss_dssp EEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGG
T ss_pred eEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCC
Confidence 467999999999875541 111122333444 6543334333210 0012345688888776542 12222222
Q ss_pred -Cc-eeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCC--ceeeccccccCCCCCCeEEEECCEEEEEcC
Q 042957 179 -LR-YKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAG--KWDLVARMWQLDIPPNQIVEVDNRLFSSGD 254 (371)
Q Consensus 179 -~~-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG 254 (371)
.. .......-+++..++...... ..+.++.+|+.+. .|..+....... ...+...+++||+...
T Consensus 232 ~~~~~~~~~~SpDg~~l~~~~~~~~----------~~~~i~~~d~~~~~~~~~~l~~~~~~~--~~~~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 232 QHHRYVGATVTEDDRFLLISAANST----------SGNRLYVKDLSQENAPLLTVQGDLDAD--VSLVDNKGSTLYLLTN 299 (693)
T ss_dssp GCCSEEEEEECTTSCEEEEEEESSS----------SCCEEEEEETTSTTCCCEEEECSSSSC--EEEEEEETTEEEEEEC
T ss_pred CCeEEEEEEEcCCCCEEEEEEccCC----------CCcEEEEEECCCCCCceEEEeCCCCce--EEEEeccCCEEEEEEC
Confidence 22 212222345554434322221 1257899998766 677664322111 1123456889998865
Q ss_pred CCCCccCeEEEEeCCCC---ceEee
Q 042957 255 CLKAWKGHIESYDGELN---MWDEV 276 (371)
Q Consensus 255 ~~~~~~~~~~~yd~~~~---~W~~~ 276 (371)
... ....+++.|+++. .|+.+
T Consensus 300 ~~~-~~~~l~~~d~~~~~~~~~~~l 323 (693)
T 3iuj_A 300 RDA-PNRRLVTVDAANPGPAHWRDL 323 (693)
T ss_dssp TTC-TTCEEEEEETTSCCGGGCEEE
T ss_pred CCC-CCCEEEEEeCCCCCccccEEE
Confidence 421 2346999998873 48876
No 273
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=78.88 E-value=33 Score=30.01 Aligned_cols=21 Identities=10% Similarity=-0.013 Sum_probs=13.5
Q ss_pred CCeEEEEcceeecccccceeeEEEEeeccc
Q 042957 312 GTHLYFLAGYRMAGELARTMSMVHIFDTAA 341 (371)
Q Consensus 312 ~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~ 341 (371)
+++.++.|+.+. .|.+||.++
T Consensus 320 ~g~~l~sg~~Dg---------~v~~w~~~~ 340 (343)
T 2xzm_R 320 LGKKLFAGFTDG---------VIRTFSFET 340 (343)
T ss_dssp SSCCEEEEETTS---------EEEEEEEEE
T ss_pred CCCeEEEecCCc---------eEEEEEEEc
Confidence 566667776543 567777664
No 274
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=77.40 E-value=35 Score=29.57 Aligned_cols=153 Identities=10% Similarity=-0.059 Sum_probs=73.9
Q ss_pred ccceEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 106 VLAWVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 106 ~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
....+|.+|..+++-+.+ .........-+++.+++..... ......++++|..+.+...+...+. ....
T Consensus 41 ~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~---~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~ 109 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANE---EKKVSEIWVADLETLSSKKILEAKN---IRSL 109 (347)
T ss_dssp EEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEET---TTTEEEEEEEETTTTEEEEEEEESE---EEEE
T ss_pred ccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEecc---CCCcceEEEEECCCCceEEEEcCCC---ccce
Confidence 356799999988776555 1111122222454333332211 0123468999998887766544332 1122
Q ss_pred EE-ECCE-EEEEecccCC-CCCC--CCccc---------cccCeeEEEECCCCce-eeccccccCCCCCCeEEEECCEEE
Q 042957 186 VT-WQGK-IHVVSGFAQR-ADSD--GSVHF---------TERSSAEVYDTQAGKW-DLVARMWQLDIPPNQIVEVDNRLF 250 (371)
Q Consensus 186 ~~-~~~~-lyv~GG~~~~-~~~~--~~~~~---------~~~~~v~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~~~~iy 250 (371)
+. -+++ |++....... .... ...++ .....++.+|+.+++. ..+.. + . ...++...+.++
T Consensus 110 ~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~-~~~~~~spdg~~ 184 (347)
T 2gop_A 110 EWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---R-FSSGIWHRDKIV 184 (347)
T ss_dssp EECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---T-TCEEEEETTEEE
T ss_pred eECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---C-cccccCCCCeEE
Confidence 22 2554 4444321000 0000 00000 0125688999998876 55544 2 2 224444444455
Q ss_pred EEcCCCCC----c-cCeEEEEeCCCCceEee
Q 042957 251 SSGDCLKA----W-KGHIESYDGELNMWDEV 276 (371)
Q Consensus 251 v~GG~~~~----~-~~~~~~yd~~~~~W~~~ 276 (371)
+.+..... . ...++.+| +.+++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 213 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWE--DGKEEKM 213 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEE--TTEEEEE
T ss_pred EEEecccccccccccccEEEeC--CCceEEe
Confidence 55433211 1 34688888 6677766
No 275
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=77.22 E-value=57 Score=31.85 Aligned_cols=62 Identities=13% Similarity=-0.067 Sum_probs=33.7
Q ss_pred ceEEEEeCCCCce-EeCCCCCC----CceeeEE-EEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeec
Q 042957 158 ASAEVYHPELDQW-TPLPNMST----LRYKCVG-VTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLV 229 (371)
Q Consensus 158 ~~~~~yd~~t~~W-~~~~~~p~----~~~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~ 229 (371)
..+.++|..+.+- ..+..... ......+ ..-+++++++...... ....++++|+.+.+...+
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----------~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ----------NVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS----------CEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCC----------CeEEEEEEeCCCCcceEE
Confidence 3788999988763 44432111 1111112 2337776655533322 125788999998876554
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=76.88 E-value=31 Score=31.86 Aligned_cols=111 Identities=9% Similarity=0.117 Sum_probs=60.6
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE-ECC-EEEEEecccCCCCCCCCccccccCee
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT-WQG-KIHVVSGFAQRADSDGSVHFTERSSA 216 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~~~~~v 216 (371)
++.||+.-- . ..+.++|+.+++...+.. ...+ -..+++ .++ .||+....... ....+
T Consensus 149 ~g~Lyv~d~-------~--~~I~~id~~~~~v~~~~~-~~~~-P~~ia~d~~G~~lyvad~~~~~----------~~~~v 207 (430)
T 3tc9_A 149 HNHLYLVGE-------Q--HPTRLIDFEKEYVSTVYS-GLSK-VRTICWTHEADSMIITNDQNNN----------DRPNN 207 (430)
T ss_dssp EEEEEEEEB-------T--EEEEEEETTTTEEEEEEC-CCSC-EEEEEECTTSSEEEEEECCSCT----------TSEEE
T ss_pred CCeEEEEeC-------C--CcEEEEECCCCEEEEEec-CCCC-cceEEEeCCCCEEEEEeCCCCc----------ccceE
Confidence 478998821 1 679999999988777643 1111 122222 234 59998743321 11345
Q ss_pred EEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 217 EVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 217 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
..++.. ..|.....+.... ..+.+++. ++.||+..-.. ..+++||+....-..+
T Consensus 208 ~~~~~~-g~~~~~~~l~~~~-~p~giavdp~~g~lyv~d~~~----~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 208 YILTRE-SGFKVITELTKGQ-NCNGAETHPINGELYFNSWNA----GQVFRYDFTTQETTPL 263 (430)
T ss_dssp EEEEGG-GTSCSEEEEEECS-SCCCEEECTTTCCEEEEETTT----TEEEEEETTTTEEEEE
T ss_pred EEEeCC-CceeeeeeeccCC-CceEEEEeCCCCEEEEEECCC----CEEEEEECCCCcEEEE
Confidence 566654 3343111122111 22345554 57888874322 3599999987765444
No 277
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=76.64 E-value=43 Score=30.23 Aligned_cols=152 Identities=13% Similarity=0.077 Sum_probs=74.8
Q ss_pred eEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCce--EeC----CCCCCCceeeEEEE-ECCEEEEEecccCCCCCCC
Q 042957 134 ACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQW--TPL----PNMSTLRYKCVGVT-WQGKIHVVSGFAQRADSDG 206 (371)
Q Consensus 134 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W--~~~----~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~ 206 (371)
+++..++++|+|=|. .+++++.....- ..+ +.||... .++... .++++|+|-|
T Consensus 185 Av~~~~g~~~fFkg~----------~~Wr~~~~~~~~~p~~I~~~wpgLP~~i-DAa~~~~~~g~~~fFkg--------- 244 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDR----------FFWLKVSERPKTSVNLISSLWPTLPSGI-EAAYEIEARNQVFLFKD--------- 244 (365)
T ss_dssp CEEEETTEEEEEETT----------EEEECCSSCCCCCEEEHHHHCSSCCSSC-CEEEEEGGGTEEEEEET---------
T ss_pred eEEEcCCeEEEEeCC----------EEEEEcCCCccCCccchhhhccCCCCCc-cEEEEecCCCEEEEEeC---------
Confidence 445579999999664 244443322110 111 2345332 222222 3789999976
Q ss_pred CccccccCeeEEEECCCCc--e-eeccc--cccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCceEeecCc
Q 042957 207 SVHFTERSSAEVYDTQAGK--W-DLVAR--MWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNMWDEVNGS 279 (371)
Q Consensus 207 ~~~~~~~~~v~~yd~~t~~--W-~~~~~--~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~ 279 (371)
+..++|+..... + +.+.. +|.......++... ++++|+|-| +..++||..+++-..
T Consensus 245 -------~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG------~~yw~yd~~~~~v~~---- 307 (365)
T 3ba0_A 245 -------DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD------NQYWRYDERRQMMDP---- 307 (365)
T ss_dssp -------TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET------TEEEEEETTTTEECS----
T ss_pred -------CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC------CEEEEEeCCcceecC----
Confidence 345555543211 1 12222 22211122344444 479999965 358999987653221
Q ss_pred ccccCCCCcccCCCCCCCCCCceeeeeeEeee-CCeEEEEcceeecccccceeeEEEEeecccc
Q 042957 280 CLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPI-GTHLYFLAGYRMAGELARTMSMVHIFDTAAK 342 (371)
Q Consensus 280 ~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~ 342 (371)
+-|..+ .+.||..+..--+++.. ++++|+|=|. ..+.||..+.
T Consensus 308 ---gyPk~I------~~~f~g~p~~iDaA~~~~~g~~YfFkg~-----------~ywr~d~~~~ 351 (365)
T 3ba0_A 308 ---GYPKLI------TKNFQGIGPKIDAVFYSKNKYYYFFQGS-----------NQFEYDFLLQ 351 (365)
T ss_dssp ---SCCCCH------HHHSTTCCSSCSEEEEETTTEEEEEETT-----------EEEEEETTTT
T ss_pred ---CCCcch------hhcCCCCCCccceeeEecCCcEEEEeCC-----------EEEEEECCcc
Confidence 111110 01132222333344444 7899998663 4567887654
No 278
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=76.44 E-value=48 Score=34.46 Aligned_cols=142 Identities=16% Similarity=0.086 Sum_probs=72.2
Q ss_pred eEEEEECCCCeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEE-EEeCCCCceEeCCCCCCCceeeEEEE
Q 042957 109 WVLRYNVKSNEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAE-VYHPELDQWTPLPNMSTLRYKCVGVT 187 (371)
Q Consensus 109 ~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~-~yd~~t~~W~~~~~~p~~~~~~~~~~ 187 (371)
.++.++........+...+..+....... +++.+++++. ...++ ++|..+.....+.. ...........
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~--------~~~l~~~~d~~~~~~~~l~~-~~~~~~~~~~S 387 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR--------EGDFLGIYDYRTGKAEKFEE-NLGNVFAMGVD 387 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET--------TEEEEEEEETTTCCEEECCC-CCCSEEEEEEC
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC--------CCceEEEEECCCCCceEecC-CccceeeeEEC
Confidence 45555555554444332221122222223 5554444332 24688 89998877666651 11222222223
Q ss_pred ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEE-ECCEEEEEcCCCC------Ccc
Q 042957 188 WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVE-VDNRLFSSGDCLK------AWK 260 (371)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~------~~~ 260 (371)
-+++.++++... ..+.++|+++++-..+..-.... ...++. -+++.+++++... ...
T Consensus 388 pDG~~la~~~~~--------------~~v~~~d~~tg~~~~~~~~~~~~--v~~~~~SpDG~~la~~~~~~~~~~~~~~~ 451 (1045)
T 1k32_A 388 RNGKFAVVANDR--------------FEIMTVDLETGKPTVIERSREAM--ITDFTISDNSRFIAYGFPLKHGETDGYVM 451 (1045)
T ss_dssp TTSSEEEEEETT--------------SEEEEEETTTCCEEEEEECSSSC--CCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred CCCCEEEEECCC--------------CeEEEEECCCCceEEeccCCCCC--ccceEECCCCCeEEEEecCccccccCCCC
Confidence 356655555322 47889999988766553211111 122333 3566555544321 223
Q ss_pred CeEEEEeCCCCceEee
Q 042957 261 GHIESYDGELNMWDEV 276 (371)
Q Consensus 261 ~~~~~yd~~~~~W~~~ 276 (371)
..++++|+.+.+...+
T Consensus 452 ~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 452 QAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp EEEEEEETTTTEEEEC
T ss_pred CeEEEEECCCCcEEEe
Confidence 4799999998875555
No 279
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=76.34 E-value=48 Score=30.63 Aligned_cols=104 Identities=12% Similarity=0.018 Sum_probs=55.0
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.+..+|+.+.+ .+..++... .. .++.. +..+|+.--..... ......+.+.++|+
T Consensus 99 ~~VsVID~~t~~--vv~~I~vG~-----~P-gia~SpDgk~lyVan~~~~~~--------------~~G~~~~~VsviD~ 156 (426)
T 3c75_H 99 TQQFVIDGSTGR--ILGMTDGGF-----LP-HPVAAEDGSFFAQASTVFERI--------------ARGKRTDYVEVFDP 156 (426)
T ss_dssp EEEEEEETTTTE--EEEEEEECS-----SC-EEEECTTSSCEEEEEEEEEET--------------TEEEEEEEEEEECT
T ss_pred CeEEEEECCCCE--EEEEEECCC-----CC-ceEECCCCCEEEEEecccccc--------------ccCCCCCEEEEEEC
Confidence 679999998876 333333221 12 34443 35688874210000 01123567999999
Q ss_pred CCCeeeecCCCC-CCC-----CCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCce
Q 042957 116 KSNEWTRCAPLS-VPR-----YDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQW 170 (371)
Q Consensus 116 ~~~~W~~~~~~~-~~r-----~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W 170 (371)
.+.+-..--+++ ..| .-+.+++ -+.++|+..-. ..+.+.++|..+.+-
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-------~~~~VsVID~~t~kv 212 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-------PAPAVGVVDLEGKTF 212 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-------SSCEEEEEETTTTEE
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-------CCCeEEEEECCCCeE
Confidence 988643211121 111 1122233 35688887321 136799999998754
No 280
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=75.15 E-value=77 Score=32.39 Aligned_cols=106 Identities=9% Similarity=-0.143 Sum_probs=52.2
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEE-EECCEEEEEecccCCCCCCCCccccccCeeEE
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAEV 218 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~ 218 (371)
++.++.|+.+ ..+.+||..+.+....-..+. . -.+++ .-+++.++.|+.+ ..+.+
T Consensus 69 g~~L~S~s~D--------~~v~lWd~~~~~~~~~~~~~~-~-V~~v~~sp~g~~l~sgs~d--------------g~V~l 124 (902)
T 2oaj_A 69 GIYLVVINAK--------DTVYVLSLYSQKVLTTVFVPG-K-ITSIDTDASLDWMLIGLQN--------------GSMIV 124 (902)
T ss_dssp TTEEEEEETT--------CEEEEEETTTCSEEEEEECSS-C-EEEEECCTTCSEEEEEETT--------------SCEEE
T ss_pred CCEEEEEECc--------CeEEEEECCCCcEEEEEcCCC-C-EEEEEECCCCCEEEEEcCC--------------CcEEE
Confidence 4445555543 468889988765322111111 1 11111 1245555566432 46888
Q ss_pred EECCCCceeecc--------ccccCC-CCCCeEEEEC--CEEEEEcCCCCCccCeEEEEeCCCCceE
Q 042957 219 YDTQAGKWDLVA--------RMWQLD-IPPNQIVEVD--NRLFSSGDCLKAWKGHIESYDGELNMWD 274 (371)
Q Consensus 219 yd~~t~~W~~~~--------~~~~~~-~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~yd~~~~~W~ 274 (371)
||+.+..-.... ...... ....+++... +.++++|+... .+ +||+.+.+-.
T Consensus 125 wd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg----~v-lWd~~~~~~~ 186 (902)
T 2oaj_A 125 YDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV----TL-TYSLVENEIK 186 (902)
T ss_dssp EETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC----EE-EEETTTTEEE
T ss_pred EECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCC----cE-EEECCCCceE
Confidence 999887642110 001111 1112344443 35666766443 48 9999887543
No 281
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=74.27 E-value=36 Score=28.21 Aligned_cols=103 Identities=8% Similarity=0.042 Sum_probs=54.7
Q ss_pred eEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCC----------CceEeCCCCCCCceeeEEEE-ECCEEEEEecccCCC
Q 042957 134 ACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPEL----------DQWTPLPNMSTLRYKCVGVT-WQGKIHVVSGFAQRA 202 (371)
Q Consensus 134 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t----------~~W~~~~~~p~~~~~~~~~~-~~~~lyv~GG~~~~~ 202 (371)
|++...+++|+|-|.. +++++... ..| +.+|... .++... .++++|+|-|
T Consensus 35 Ai~~~~g~~~fFkg~~----------~Wr~~~~~~~~~~P~~I~~~w---p~lp~~I-DAA~~~~~~~k~yfFkG----- 95 (218)
T 1gen_A 35 GIAQIRGEIFFFKDRF----------IWRTVTPRDKPMGPLLVATFW---PELPEKI-DAVYEAPQEEKAVFFAG----- 95 (218)
T ss_dssp EEEEETTEEEEEETTE----------EEEESSTTSCCEEEEEGGGTC---TTSCSCC-SEEEEETTTTEEEEEET-----
T ss_pred EEEeCCCcEEEEECCE----------EEEEeCCCCccCCCEEHHHhc---CCCCCCc-cEEEEECCCCEEEEEeC-----
Confidence 4556789999997742 34443322 123 2344332 222222 3689999976
Q ss_pred CCCCCccccccCeeEEEECCCCce---eeccc--cccCCCCCCeEEE--ECCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 203 DSDGSVHFTERSSAEVYDTQAGKW---DLVAR--MWQLDIPPNQIVE--VDNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 203 ~~~~~~~~~~~~~v~~yd~~t~~W---~~~~~--~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+..++||..+..- +.+.. +|.......++.. .++++|+|-| +..++||..+++
T Consensus 96 -----------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG------~~ywr~d~~~~~ 155 (218)
T 1gen_A 96 -----------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG------DKFWRYNEVKKK 155 (218)
T ss_dssp -----------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET------TEEEEEETTTTE
T ss_pred -----------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC------CEEEEEECcccc
Confidence 4567787431100 11211 1211112234444 2689999965 258999998764
No 282
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=73.91 E-value=42 Score=28.78 Aligned_cols=113 Identities=11% Similarity=0.021 Sum_probs=58.6
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEE
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEV 218 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~ 218 (371)
++.||+.+-.. ..+++|++ +...+.... +.......+..-+++||++... ...+.+
T Consensus 56 g~~l~~~d~~~--------~~i~~~~~-~g~~~~~~~-~~~~~~gl~~d~dG~l~v~~~~--------------~~~v~~ 111 (305)
T 3dr2_A 56 QRTLVWSDLVG--------RRVLGWRE-DGTVDVLLD-ATAFTNGNAVDAQQRLVHCEHG--------------RRAITR 111 (305)
T ss_dssp GTEEEEEETTT--------TEEEEEET-TSCEEEEEE-SCSCEEEEEECTTSCEEEEETT--------------TTEEEE
T ss_pred CCEEEEEECCC--------CEEEEEeC-CCCEEEEeC-CCCccceeeECCCCCEEEEECC--------------CCEEEE
Confidence 34577775442 45888887 444433321 1111111112236788876521 146788
Q ss_pred EECCCCceeeccccccC-C-CCCCeEEE-ECCEEEEE----cCCC---------CCccCeEEEEeCCCCceEee
Q 042957 219 YDTQAGKWDLVARMWQL-D-IPPNQIVE-VDNRLFSS----GDCL---------KAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 219 yd~~t~~W~~~~~~~~~-~-~~~~~~~~-~~~~iyv~----GG~~---------~~~~~~~~~yd~~~~~W~~~ 276 (371)
||+. .+.+.+...... . .....++. -+++||+. |-.. ......+++||+++.+++.+
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 8886 555554322111 1 11122333 37788885 3211 01124699999988888877
No 283
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=71.41 E-value=58 Score=29.27 Aligned_cols=101 Identities=11% Similarity=0.017 Sum_probs=51.4
Q ss_pred ceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 39 WLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 39 ~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
.+..||+.+.+ .+..++... .. .++.. +..+|+..-..... .+....+.+.+||+.
T Consensus 48 ~v~v~D~~t~~--~~~~i~~g~-----~p-~i~~spDg~~lyv~n~~~~~~--------------~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 48 QQWVLDAGSGS--ILGHVNGGF-----LP-NPVAAHSGSEFALASTSFSRI--------------AKGKRTDYVEVFDPV 105 (373)
T ss_pred EEEEEECCCCe--EEEEecCCC-----CC-CeEECCCCCEEEEEecccccc--------------ccCCCCCeEEEEECC
Confidence 68999998876 333343221 11 23332 45788885321000 011235678899998
Q ss_pred CCeee-ecCCCC-CCC-------CCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCce
Q 042957 117 SNEWT-RCAPLS-VPR-------YDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQW 170 (371)
Q Consensus 117 ~~~W~-~~~~~~-~~r-------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W 170 (371)
+.+-. .++ ++ .+| ...+...-+..||+..-. ..+.+.++| .+++-
T Consensus 106 t~~~~~~i~-~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~-------~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 106 TFLPIADIE-LPDAPRFDVGPYSWMNANTPNNADLLFFQFA-------AGPAVGLVV-QGGSS 159 (373)
T ss_pred CCcEEEEEE-CCCccccccCCCccceEECCCCCEEEEEecC-------CCCeEEEEE-CCCCE
Confidence 75432 221 11 111 122222235678877321 135799999 87754
No 284
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=70.86 E-value=55 Score=28.81 Aligned_cols=63 Identities=6% Similarity=-0.018 Sum_probs=35.6
Q ss_pred CCEEEEEecccCCCCCCCCccccccCe-eEEEECCCCceeeccccccC--CCCCCeEEEE-CCEEEEEcCCCCCccCeEE
Q 042957 189 QGKIHVVSGFAQRADSDGSVHFTERSS-AEVYDTQAGKWDLVARMWQL--DIPPNQIVEV-DNRLFSSGDCLKAWKGHIE 264 (371)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~~~~~~~-v~~yd~~t~~W~~~~~~~~~--~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 264 (371)
++++++.|+.+ .. +.+||..+.+-.. .+... ......++.. ++++++.|+.+. .+.
T Consensus 206 ~g~~l~s~s~d--------------~~~v~iwd~~~~~~~~--~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~----~v~ 265 (355)
T 3vu4_A 206 KSDMVATCSQD--------------GTIIRVFKTEDGVLVR--EFRRGLDRADVVDMKWSTDGSKLAVVSDKW----TLH 265 (355)
T ss_dssp TSSEEEEEETT--------------CSEEEEEETTTCCEEE--EEECTTCCSCEEEEEECTTSCEEEEEETTC----EEE
T ss_pred CCCEEEEEeCC--------------CCEEEEEECCCCcEEE--EEEcCCCCCcEEEEEECCCCCEEEEEECCC----EEE
Confidence 66677777543 45 8899998765322 22110 1111123332 567777776554 499
Q ss_pred EEeCCCC
Q 042957 265 SYDGELN 271 (371)
Q Consensus 265 ~yd~~~~ 271 (371)
+||+.+.
T Consensus 266 iw~~~~~ 272 (355)
T 3vu4_A 266 VFEIFND 272 (355)
T ss_dssp EEESSCC
T ss_pred EEEccCC
Confidence 9998764
No 285
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=69.95 E-value=46 Score=27.56 Aligned_cols=101 Identities=13% Similarity=0.096 Sum_probs=54.6
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCc---eEeCCC--CCCC--ceeeEEEE--ECCEEEEEecccCCCCCCCCcc
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQ---WTPLPN--MSTL--RYKCVGVT--WQGKIHVVSGFAQRADSDGSVH 209 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~---W~~~~~--~p~~--~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~ 209 (371)
++++|+|-|. ..++||..+.. =+.+.. +|.. ...++ .. .++++|+|-|
T Consensus 87 ~~k~yfFkG~----------~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAA-f~~~~~g~~YfFkG------------ 143 (218)
T 1gen_A 87 EEKAVFFAGN----------EYWIYSASTLERGYPKPLTSLGLPPDVQRVDAA-FNWSKNKKTYIFAG------------ 143 (218)
T ss_dssp TTEEEEEETT----------EEEEEETTEECTTCSEEGGGGTCCTTCCCCSEE-EEETTTTEEEEEET------------
T ss_pred CCEEEEEeCC----------EEEEEcCccccCCCCccHhhcCCCCCcCCccEE-EEEcCCCeEEEEEC------------
Confidence 6899999664 47888742110 011221 2321 22222 33 3689999986
Q ss_pred ccccCeeEEEECCCCceeec-----c-ccccCCCCCCeEEEEC--CEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 210 FTERSSAEVYDTQAGKWDLV-----A-RMWQLDIPPNQIVEVD--NRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 210 ~~~~~~v~~yd~~t~~W~~~-----~-~~~~~~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+..++||..+++-..- . ..+.......++...+ +++|++-|. ..++||..+..
T Consensus 144 ----~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg~------~y~~~~~~~~~ 204 (218)
T 1gen_A 144 ----DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA------YYLKLENQSLK 204 (218)
T ss_dssp ----TEEEEEETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEETT------EEEEEETTEEE
T ss_pred ----CEEEEEECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEECC------EEEEEECCcee
Confidence 4678899877653321 1 0111111123444444 899999653 48888876543
No 286
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=69.83 E-value=43 Score=27.19 Aligned_cols=106 Identities=8% Similarity=0.023 Sum_probs=55.3
Q ss_pred eEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCC---CceEeC----CCCCCCceeeEEEEECCEEEEEecccCCCCCCC
Q 042957 134 ACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPEL---DQWTPL----PNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDG 206 (371)
Q Consensus 134 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t---~~W~~~----~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~ 206 (371)
+++..++++|+|-|. .+++++... +.=+.+ +.||... .++....++++|+|-|
T Consensus 10 A~~~~~g~~~fFkg~----------~~w~~~~~~~~~gyP~~I~~~w~glP~~i-DAa~~~~~g~~yfFkg--------- 69 (196)
T 3c7x_A 10 TVAMLRGEMFVFKER----------WFWRVRNNQVMDGYPMPIGQFWRGLPASI-NTAYERKDGKFVFFKG--------- 69 (196)
T ss_dssp EEEEETTEEEEEETT----------EEEEEETTEECTTCSEEHHHHSTTCCSSC-CEEEECTTSCEEEEET---------
T ss_pred EEEEcCCEEEEEECC----------EEEEEECCccCCCCceEhhHhccCCCCCc-cEEEEeCCCcEEEecC---------
Confidence 344678999999764 355554321 100111 2355432 2322235788999876
Q ss_pred CccccccCeeEEEECCCCce---eeccccc--cCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCc
Q 042957 207 SVHFTERSSAEVYDTQAGKW---DLVARMW--QLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 207 ~~~~~~~~~v~~yd~~t~~W---~~~~~~~--~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~ 272 (371)
+..++|+..+... ..+..+. -+.....++... ++++|++-|. ..++||..+++
T Consensus 70 -------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG~------~yw~yd~~~~~ 129 (196)
T 3c7x_A 70 -------DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN------KYYRFNEELRA 129 (196)
T ss_dssp -------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEETT------EEEEEETTTTE
T ss_pred -------CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEECC------EEEEEeCCccc
Confidence 4567777542211 1222211 111122344433 5899999652 58999988753
No 287
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=69.70 E-value=60 Score=28.80 Aligned_cols=104 Identities=12% Similarity=0.138 Sum_probs=51.7
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+.++.||+.+.+-. ..++.. ... .++.. +.++|+..-..... ......+.+..||+
T Consensus 31 ~~v~v~D~~t~~~~--~~i~~g-----~~p-~i~~spdg~~lyv~~~~~~~~--------------~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 31 SRVHVYDYTNGKFL--GMVPTA-----FNG-HVQVSNDGKKIYTMTTYHERI--------------TRGKRSDVVEVWDA 88 (361)
T ss_dssp CEEEEEETTTCCEE--EEEECC-----EEE-EEEECTTSSEEEEEEEEETTS--------------SSSCEEEEEEEEET
T ss_pred CeEEEEECCCCeEE--EEecCC-----CCC-ceEECCCCCEEEEEEeccccc--------------ccCCCCCEEEEEEC
Confidence 56899999887643 222211 111 33443 35788875221000 01122467889998
Q ss_pred CCCee-eecCCCCC----CCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCce
Q 042957 116 KSNEW-TRCAPLSV----PRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQW 170 (371)
Q Consensus 116 ~~~~W-~~~~~~~~----~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W 170 (371)
.+.+- ..++..+. ...-+.++. -+..||+.... ..+.+.+||..+++-
T Consensus 89 ~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~-------~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS-------PATSIGIVDVAKGDY 143 (361)
T ss_dssp TTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-------SSEEEEEEETTTTEE
T ss_pred cCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-------CCCeEEEEECCCCcE
Confidence 77543 22321111 011122232 24577776321 135789999988743
No 288
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=67.57 E-value=77 Score=29.20 Aligned_cols=135 Identities=8% Similarity=0.033 Sum_probs=75.8
Q ss_pred CCCCceeccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccce--EEEEECCCCe---
Q 042957 45 PSNNTWSHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAW--VLRYNVKSNE--- 119 (371)
Q Consensus 45 ~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~yd~~~~~--- 119 (371)
...+.|++-. ++..+ ..-.-|+.+.+++.=|.+|=.+ +.....+ +..|...-++
T Consensus 267 F~~spW~~t~-L~~i~--~vTe~HSFa~i~~~~fa~GyHn------------------GDv~PRe~G~~yfs~~~~sp~~ 325 (670)
T 3ju4_A 267 FHKSPWRKTD-LGLIP--SVTEVHSFATIDNNGFAMGYHQ------------------GDVAPREVGLFYFPDAFNSPSN 325 (670)
T ss_dssp STTSCCEEEE-CCSCT--TCSEEEEEEECSSSCEEEEEEE------------------CSSSSCEEEEEEETTTTTCTTC
T ss_pred eccCCceecc-ccccc--ceeeeeeeeEecCCceEEEecc------------------CCCCcceeeEEEecccccCCcc
Confidence 4566787632 22221 2345778899988778886333 1112222 3333221111
Q ss_pred --eeecCC-CCCCCCCeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC-CCCCceeeEEEEECCEEEEE
Q 042957 120 --WTRCAP-LSVPRYDFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN-MSTLRYKCVGVTWQGKIHVV 195 (371)
Q Consensus 120 --W~~~~~-~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~-~p~~~~~~~~~~~~~~lyv~ 195 (371)
=++++. .....+..++-.++++||+.---.. ..+.-+.+.+-+..-..|+.+.- -..-......+.+++.||+|
T Consensus 326 ~vrr~i~sey~~~AsEPCvkyYdgvLyLtTRgt~--~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mF 403 (670)
T 3ju4_A 326 YVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTR--GDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMF 403 (670)
T ss_dssp CEEEECCGGGCTTEEEEEEEEETTEEEEEEEESC--TTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEE
T ss_pred eeeeechhhhccccccchhhhhCCEEEEEecCcC--CCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEE
Confidence 122322 2223345667778999999853321 22344678888888889988742 12223344557889999999
Q ss_pred ecccCCC
Q 042957 196 SGFAQRA 202 (371)
Q Consensus 196 GG~~~~~ 202 (371)
|-.....
T Consensus 404 gsERA~n 410 (670)
T 3ju4_A 404 GSERAEN 410 (670)
T ss_dssp EECSSTT
T ss_pred ecccccc
Confidence 9765543
No 289
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=66.54 E-value=99 Score=30.12 Aligned_cols=199 Identities=12% Similarity=0.066 Sum_probs=112.5
Q ss_pred cceeEEeCCCCceeccCCCCcccccccccceEEEEE--CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEEC
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL--GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNV 115 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 115 (371)
+++.+.|..+..-..+.+++. .+...+++.. ++.||+.--. ...++++++
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~-----~~~~~~l~~d~~~~~lywtD~~-----------------------~~~I~r~~~ 66 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTG-----VKEASALDFDVTDNRIYWTDIS-----------------------LKTISRAFM 66 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCS-----CSCEEEEEEETTTTEEEEEETT-----------------------TTEEEEEET
T ss_pred CcEEEEECCCCCcceEEEcCC-----CCceEEEEEECCCCEEEEEECC-----------------------CCeEEEEEC
Confidence 457788887654333322321 1223355554 5789988433 357889988
Q ss_pred CCCeeeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC--CCCCCCceeeEEEEE--C
Q 042957 116 KSNEWTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL--PNMSTLRYKCVGVTW--Q 189 (371)
Q Consensus 116 ~~~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~~~~~~~~~~--~ 189 (371)
.....+.+..... ..-.++++ .+++||+.-.. ...++++++....-+.+ ..+..|+ .+++. +
T Consensus 67 ~g~~~~~v~~~g~-~~P~GlAvD~~~~~LY~tD~~--------~~~I~v~~~dG~~~~~l~~~~l~~P~---~iavdp~~ 134 (628)
T 4a0p_A 67 NGSALEHVVEFGL-DYPEGMAVDWLGKNLYWADTG--------TNRIEVSKLDGQHRQVLVWKDLDSPR---ALALDPAE 134 (628)
T ss_dssp TSCSCEEEECSSC-SCCCEEEEETTTTEEEEEETT--------TTEEEEEETTSTTCEEEECSSCCCEE---EEEEETTT
T ss_pred CCCCcEEEEeCCC-CCcceEEEEeCCCEEEEEECC--------CCEEEEEecCCCcEEEEEeCCCCCcc---cEEEccCC
Confidence 7765554432211 11224444 47899998332 35799999865433333 2233332 33443 6
Q ss_pred CEEEEEe-cccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEE
Q 042957 190 GKIHVVS-GFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESY 266 (371)
Q Consensus 190 ~~lyv~G-G~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~y 266 (371)
+.||+.- |. ...|++.++....-+.+.. .. ..+.++++- +++||+.-.. .+.|+++
T Consensus 135 G~lY~tD~g~--------------~~~I~r~~~dG~~~~~l~~--~~-~~P~GlalD~~~~~LY~aD~~----~~~I~~~ 193 (628)
T 4a0p_A 135 GFMYWTEWGG--------------KPKIDRAAMDGSERTTLVP--NV-GRANGLTIDYAKRRLYWTDLD----TNLIESS 193 (628)
T ss_dssp TEEEEEECSS--------------SCEEEEEETTSCSCEEEEC--SC-SSEEEEEEETTTTEEEEEETT----TTEEEEE
T ss_pred CeEEEeCCCC--------------CCEEEEEeCCCCceEEEEC--CC-CCcceEEEccccCEEEEEECC----CCEEEEE
Confidence 8899875 21 1478888887665444432 11 112345554 6899998543 3469999
Q ss_pred eCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEc
Q 042957 267 DGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLA 319 (371)
Q Consensus 267 d~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~G 319 (371)
|+....=+.+. ..++. -++++..+++||+.-
T Consensus 194 d~dG~~~~v~~----~~l~~------------------P~glav~~~~ly~tD 224 (628)
T 4a0p_A 194 NMLGLNREVIA----DDLPH------------------PFGLTQYQDYIYWTD 224 (628)
T ss_dssp ETTSCSCEEEE----ECCSC------------------EEEEEEETTEEEEEE
T ss_pred cCCCCceEEee----ccCCC------------------ceEEEEECCEEEEec
Confidence 98764333331 22332 246677788998874
No 290
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=66.44 E-value=73 Score=28.54 Aligned_cols=22 Identities=14% Similarity=0.037 Sum_probs=16.5
Q ss_pred EEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 248 RLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 248 ~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
++++.|+... .+.+||+.+..-
T Consensus 240 ~~l~s~~~dg----~i~iwd~~~~~~ 261 (447)
T 3dw8_B 240 NTFVYSSSKG----TIRLCDMRASAL 261 (447)
T ss_dssp TEEEEEETTS----CEEEEETTTCSS
T ss_pred cEEEEEeCCC----eEEEEECcCCcc
Confidence 6777777655 499999988663
No 291
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=66.38 E-value=67 Score=28.10 Aligned_cols=85 Identities=14% Similarity=0.091 Sum_probs=46.4
Q ss_pred cceEEEEE-CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECCCCeeeecCCCC----CCCCC-eeEEEE-
Q 042957 66 KGFSIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVKSNEWTRCAPLS----VPRYD-FACTVC- 138 (371)
Q Consensus 66 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~----~~r~~-~~~~~~- 138 (371)
.-++++.. +++||+..-.. .......+++||+.+++-.+.-.++ .+... ..+++-
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~------------------~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~ 129 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGN------------------QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDL 129 (343)
T ss_dssp CEEEEEECSSSEEEEEECHH------------------HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEET
T ss_pred EeeEEEEcCCCcEEEEcCCC------------------CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEec
Confidence 34456665 47899984221 0012467999999988743221111 11112 344444
Q ss_pred -CCEEEEEcCCCCCCCCCCCceEEEEeCCCCc-eEeC
Q 042957 139 -DNKIYVAGGKSNLFSAKGTASAEVYHPELDQ-WTPL 173 (371)
Q Consensus 139 -~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~-W~~~ 173 (371)
++.+|+..-.. .....+.+||+.+++ |+.+
T Consensus 130 ~~g~~yvtd~~~-----~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 130 IHNFVYISDPAP-----DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp TTTEEEEEECCS-----GGGCEEEEEETTTCCEEEEC
T ss_pred CCCEEEEEcCcc-----CCCCeEEEEECCCCCEEEEe
Confidence 57899874210 013578999988654 5544
No 292
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=66.36 E-value=78 Score=28.81 Aligned_cols=30 Identities=13% Similarity=0.007 Sum_probs=19.1
Q ss_pred CCEEEEEcC---C--CCCccCeEEEEeCCCCceEe
Q 042957 246 DNRLFSSGD---C--LKAWKGHIESYDGELNMWDE 275 (371)
Q Consensus 246 ~~~iyv~GG---~--~~~~~~~~~~yd~~~~~W~~ 275 (371)
++++|+.-+ . .+...+.++++|+++.+-..
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~ 325 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA 325 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEE
Confidence 678998632 1 11223579999999865443
No 293
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=66.16 E-value=18 Score=30.32 Aligned_cols=59 Identities=3% Similarity=0.019 Sum_probs=36.1
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEe-----CC-CCCC-------CceeeEEEE--ECCEEEEEecccCCCC
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTP-----LP-NMST-------LRYKCVGVT--WQGKIHVVSGFAQRAD 203 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~-----~~-~~p~-------~~~~~~~~~--~~~~lyv~GG~~~~~~ 203 (371)
++++|+|-|. ..++||..+++-.. +. .+|. .... ++.. .++++|+|-|
T Consensus 129 ~~k~yfFkG~----------~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iD-AA~~~~~~g~~YfFkg------ 191 (227)
T 3lp9_A 129 GKEVYLFKGD----------QYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGAD-AAFASHKTNEVYFFKD------ 191 (227)
T ss_dssp TTEEEEEETT----------EEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCS-EEEECSSTTEEEEEET------
T ss_pred CCEEEEEECC----------EEEEEeCCCccccCCCCeEHHHCCCCccccccCCCcc-EEEEcCCCceEEEEEC------
Confidence 6899999774 47899987654322 11 1221 1122 2222 3689999986
Q ss_pred CCCCccccccCeeEEEECCCC
Q 042957 204 SDGSVHFTERSSAEVYDTQAG 224 (371)
Q Consensus 204 ~~~~~~~~~~~~v~~yd~~t~ 224 (371)
+.-++||..++
T Consensus 192 ----------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 192 ----------DHYARVKVTPX 202 (227)
T ss_dssp ----------TEEEEEECCSS
T ss_pred ----------CEEEEEECCcc
Confidence 45688888776
No 294
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=65.00 E-value=73 Score=27.99 Aligned_cols=100 Identities=10% Similarity=-0.115 Sum_probs=48.6
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEE
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEV 218 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~ 218 (371)
++.+.+.|+.+ ..+.+||..+++-...-..+.. -.++....+.+++.. ...+.+
T Consensus 70 ~~~~~~~~~~d--------~~v~iWd~~~~~~~~~~~~~~~--v~~v~~~~~~~~~~~----------------~~~i~i 123 (355)
T 3vu4_A 70 TNYVAFVTGVK--------EVVHIWDDVKKQDVSRIKVDAP--VKDLFLSREFIVVSY----------------GDVISV 123 (355)
T ss_dssp SSEEEEECSST--------TEEEEEETTTTEEEEEEECSSC--EEEEEECSSEEEEEE----------------TTEEEE
T ss_pred CCEEEEEECCc--------cEEEEEECCCCcEEEEEECCCc--eEEEEEcCCEEEEEE----------------cCEEEE
Confidence 34565677654 3789999888754332112221 122233345555443 146888
Q ss_pred EECCCCceeeccccccCCCCCCeEEEECCEEEEE-cCCCCCccCeEEEEeCCCCc
Q 042957 219 YDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSS-GDCLKAWKGHIESYDGELNM 272 (371)
Q Consensus 219 yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~-GG~~~~~~~~~~~yd~~~~~ 272 (371)
||+.+.. +.+..+.. . ...++...+.+.+. |+... .+.+||+.+..
T Consensus 124 ~d~~~~~-~~~~~~~~-~--~~~~~~s~~~la~~sg~~~g----~v~iwd~~~~~ 170 (355)
T 3vu4_A 124 FKFGNPW-KRITDDIR-F--GGVCEFSNGLLVYSNEFNLG----QIHITKLQSSG 170 (355)
T ss_dssp EESSTTC-CBSSCCEE-E--EEEEEEETTEEEEEESSCTT----CEEEEECCC--
T ss_pred EECCCCc-eeeEEecc-C--CceEEEEccEEEEeCCCcCc----EEEEEECCCCC
Confidence 9988761 11211111 1 11122223444443 44333 49999998743
No 295
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=64.89 E-value=72 Score=27.90 Aligned_cols=134 Identities=9% Similarity=-0.069 Sum_probs=73.5
Q ss_pred ceEEEEECCCCeeeec--CCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceee
Q 042957 108 AWVLRYNVKSNEWTRC--APLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~--~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~ 183 (371)
..++++++....-+.+ ..+..| .++++. ++.||+.--. ....++++++....-+.+..-.. ..-.
T Consensus 101 ~~I~~~~~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~-------~~~~I~r~~~dG~~~~~~~~~~l-~~Pn 169 (318)
T 3sov_A 101 NRIEVSNLDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG-------EVPKIERAGMDGSSRFIIINSEI-YWPN 169 (318)
T ss_dssp TEEEEEETTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS-------SSCEEEEEETTSCSCEEEECSSC-SCEE
T ss_pred CEEEEEECCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC-------CCCEEEEEEcCCCCeEEEEECCC-CCcc
Confidence 5688888865432222 222222 234443 6889987311 13578999886433233211111 1112
Q ss_pred EEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEECCEEEEEcCCCCCccC
Q 042957 184 VGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEVDNRLFSSGDCLKAWKG 261 (371)
Q Consensus 184 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~ 261 (371)
.+++- +++||+.-. ....|+++|+....-+.+..- ....+.++++.++.+|+..-. ..
T Consensus 170 glavd~~~~~lY~aD~--------------~~~~I~~~d~dG~~~~~~~~~--~~~~P~glav~~~~lywtd~~----~~ 229 (318)
T 3sov_A 170 GLTLDYEEQKLYWADA--------------KLNFIHKSNLDGTNRQAVVKG--SLPHPFALTLFEDILYWTDWS----TH 229 (318)
T ss_dssp EEEEETTTTEEEEEET--------------TTTEEEEEETTSCSCEEEECS--CCSCEEEEEEETTEEEEEETT----TT
T ss_pred EEEEeccCCEEEEEEC--------------CCCEEEEEcCCCCceEEEecC--CCCCceEEEEeCCEEEEEecC----CC
Confidence 33333 788999863 225789999875443333221 111224677889999998432 23
Q ss_pred eEEEEeCCCCc
Q 042957 262 HIESYDGELNM 272 (371)
Q Consensus 262 ~~~~yd~~~~~ 272 (371)
.|.++|+.+.+
T Consensus 230 ~V~~~~~~~G~ 240 (318)
T 3sov_A 230 SILACNKYTGE 240 (318)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCCCC
Confidence 69999986554
No 296
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=64.46 E-value=37 Score=29.31 Aligned_cols=18 Identities=22% Similarity=0.156 Sum_probs=12.6
Q ss_pred cceEEEEECCEEEEEcCc
Q 042957 66 KGFSIVSLGDSVYIIGGL 83 (371)
Q Consensus 66 ~~~~~~~~~~~iyv~GG~ 83 (371)
..|+++.-+++||.+|-.
T Consensus 72 ~~hs~~l~~G~v~~wG~n 89 (282)
T 3qhy_B 72 NYHSLALKDGEVIAWGGN 89 (282)
T ss_dssp SSEEEEEETTEEEEEECC
T ss_pred CCEEEEEECCEEEEeeCC
Confidence 355666668889998754
No 297
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=60.52 E-value=86 Score=27.36 Aligned_cols=137 Identities=13% Similarity=0.005 Sum_probs=73.8
Q ss_pred cceEEEEECCCCe---eeecCCCCCCCCCeeEEE--ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC--CCCCCC
Q 042957 107 LAWVLRYNVKSNE---WTRCAPLSVPRYDFACTV--CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL--PNMSTL 179 (371)
Q Consensus 107 ~~~v~~yd~~~~~---W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~ 179 (371)
...++++++.... +.....+. .-.++++ .+++||+.-.. ...++++++....-+.+ ..+..+
T Consensus 56 ~~~I~r~~~~g~~~~~~~~~~~l~---~p~glavd~~~g~ly~~d~~--------~~~I~~~~~dG~~~~~l~~~~~~~P 124 (318)
T 3sov_A 56 EEAIKRTEFNKTESVQNVVVSGLL---SPDGLACDWLGEKLYWTDSE--------TNRIEVSNLDGSLRKVLFWQELDQP 124 (318)
T ss_dssp TTEEEEEETTSSSCCCEEEEECCS---CCCEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECSSCSSE
T ss_pred CCcEEEEEccCCCceEEEEcCCCC---CccEEEEEcCCCeEEEEECC--------CCEEEEEECCCCcEEEEEeCCCCCc
Confidence 3568889887652 21112221 1223444 47899987332 25788998876433333 222222
Q ss_pred ceeeEEEE--ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCC
Q 042957 180 RYKCVGVT--WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDC 255 (371)
Q Consensus 180 ~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~ 255 (371)
+ .+++ .++.||+.--. ....|+++++....-+.+... .-....++++- +++||+.-..
T Consensus 125 ~---giavdp~~g~ly~td~~-------------~~~~I~r~~~dG~~~~~~~~~--~l~~Pnglavd~~~~~lY~aD~~ 186 (318)
T 3sov_A 125 R---AIALDPSSGFMYWTDWG-------------EVPKIERAGMDGSSRFIIINS--EIYWPNGLTLDYEEQKLYWADAK 186 (318)
T ss_dssp E---EEEEEGGGTEEEEEECS-------------SSCEEEEEETTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEETT
T ss_pred c---EEEEeCCCCEEEEEecC-------------CCCEEEEEEcCCCCeEEEEEC--CCCCccEEEEeccCCEEEEEECC
Confidence 2 2333 36889987511 114788998875432322111 11112356654 7899998543
Q ss_pred CCCccCeEEEEeCCCCceEee
Q 042957 256 LKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 256 ~~~~~~~~~~yd~~~~~W~~~ 276 (371)
...|+++|+....-+.+
T Consensus 187 ----~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 187 ----LNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp ----TTEEEEEETTSCSCEEE
T ss_pred ----CCEEEEEcCCCCceEEE
Confidence 34699999876444444
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=59.84 E-value=1.1e+02 Score=28.19 Aligned_cols=108 Identities=10% Similarity=0.087 Sum_probs=57.5
Q ss_pred CEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEE
Q 042957 140 NKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVY 219 (371)
Q Consensus 140 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~y 219 (371)
+.||+.-. . ..+.++|+.+++...+.. ...+-...++..+++||+..-.... ....+..+
T Consensus 153 g~Lyv~D~-------~--~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~----------~~~gv~~~ 212 (433)
T 4hw6_A 153 DDLYWVGQ-------R--DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSD----------TNTGIYLF 212 (433)
T ss_dssp CEEEEECB-------T--SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCT----------TSEEEEEE
T ss_pred CEEEEEeC-------C--CCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCc----------ccceEEEE
Confidence 89999821 1 679999998888777653 1111112222335569988732211 11235555
Q ss_pred ECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 220 DTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 220 d~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
+... .+.....++.... ...+++. ++.||+..... ..+++||+.+...
T Consensus 213 ~~~~-~~~~~~~~~~~~~-P~giavd~~~G~lyv~d~~~----~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 213 TRAS-GFTERLSLCNARG-AKTCAVHPQNGKIYYTRYHH----AMISSYDPATGTL 262 (433)
T ss_dssp CGGG-TTCCEEEEEECSS-BCCCEECTTTCCEEECBTTC----SEEEEECTTTCCE
T ss_pred ECCC-CeeccccccccCC-CCEEEEeCCCCeEEEEECCC----CEEEEEECCCCeE
Confidence 5432 2321111111111 2234443 67898875322 3599999986665
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=59.18 E-value=98 Score=27.54 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=53.3
Q ss_pred ccceeEEeCC---CCceeccCCCCccccc------ccccce-EEEEE-CCEEEEEcCcccccCCCCCCCCCCcccccccc
Q 042957 37 SNWLASYNPS---NNTWSHVSHIPDLLEN------HVLKGF-SIVSL-GDSVYIIGGLLCHKERAHNSDESDDFVDAYDK 105 (371)
Q Consensus 37 ~~~~~~yd~~---~~~W~~~~~~~~~~~~------~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 105 (371)
.+.+.+||+. +++=....+++..... ...... -+++- ++.+||.+...
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~--------------------- 157 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG--------------------- 157 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES---------------------
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC---------------------
Confidence 4679999988 5442222333321100 011112 33333 47899986542
Q ss_pred ccceEEEEECCCCe---eeecCCCCCCCCCe-eEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCC
Q 042957 106 VLAWVLRYNVKSNE---WTRCAPLSVPRYDF-ACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPEL 167 (371)
Q Consensus 106 ~~~~v~~yd~~~~~---W~~~~~~~~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 167 (371)
...++++++.... |-.-.+....+.+. +++.. +..|++..+ . ..++.||..+
T Consensus 158 -~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~--------g~L~~fD~~~ 215 (334)
T 2p9w_A 158 -MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P--------RALTAFDVSK 215 (334)
T ss_dssp -SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S--------SSEEEEECSS
T ss_pred -CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C--------CeEEEEcCCC
Confidence 2669999997653 54322222334443 44444 446666644 3 4689999874
No 300
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=57.72 E-value=85 Score=30.68 Aligned_cols=62 Identities=11% Similarity=0.034 Sum_probs=34.6
Q ss_pred ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeec-----cc-cccCCCCCCeEEEEC--CEEEEEcCCCCCc
Q 042957 188 WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLV-----AR-MWQLDIPPNQIVEVD--NRLFSSGDCLKAW 259 (371)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~-----~~-~~~~~~~~~~~~~~~--~~iyv~GG~~~~~ 259 (371)
.++++|+|-| +..++||..+++-..- .. .+.......++.... +++|++-|.
T Consensus 547 ~~gktYFFkG----------------~~ywryd~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG~---- 606 (631)
T 1ck7_A 547 KNKKTYIFAG----------------DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA---- 606 (631)
T ss_dssp TTCEEEEEET----------------TEEEEEETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEETT----
T ss_pred CCCeEEEEEC----------------CEEEEEcCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEECC----
Confidence 4689999986 4678899876543221 11 011011122333333 789998663
Q ss_pred cCeEEEEeCCCC
Q 042957 260 KGHIESYDGELN 271 (371)
Q Consensus 260 ~~~~~~yd~~~~ 271 (371)
..++||..+.
T Consensus 607 --~Ywr~d~~~~ 616 (631)
T 1ck7_A 607 --YYLKLENQSL 616 (631)
T ss_dssp --EEECCBTTBT
T ss_pred --EEEEEeCccc
Confidence 4677777654
No 301
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=57.45 E-value=1e+02 Score=27.35 Aligned_cols=250 Identities=14% Similarity=0.076 Sum_probs=113.9
Q ss_pred cceeEEeCCCCceeccCCCCccc--ccccccceEEEEE----CCEEEEEcCcccccCCCCCCCCCCccccccccccceEE
Q 042957 38 NWLASYNPSNNTWSHVSHIPDLL--ENHVLKGFSIVSL----GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVL 111 (371)
Q Consensus 38 ~~~~~yd~~~~~W~~~~~~~~~~--~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 111 (371)
..|.++||..+.-..+ ..+... -.......++..+ +++|+++.-.. .. + +.........+.+.
T Consensus 35 g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~-~a-----f----~~~g~~~~g~~~v~ 103 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA-KS-----F----NFADQSSHGASSFH 103 (334)
T ss_dssp TEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET-TT-----T----CTTSCCSSSCCEEE
T ss_pred CEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc-cc-----c----cccccccCCCCEEE
Confidence 3588999987654444 232100 0011223466662 47898862100 00 0 00000122357799
Q ss_pred EEECC---CCe--eee-cCCCCCC-------CCC-e-eEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCc---eEe
Q 042957 112 RYNVK---SNE--WTR-CAPLSVP-------RYD-F-ACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQ---WTP 172 (371)
Q Consensus 112 ~yd~~---~~~--W~~-~~~~~~~-------r~~-~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~---W~~ 172 (371)
+||+. +++ |.. ++..... +.. + -+++ -++.+||.+... ...++++++.... |-.
T Consensus 104 ~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~-------~~~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 104 SFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG-------MPAIARVSADGKTVSTFAW 176 (334)
T ss_dssp EEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES-------SCEEEEECTTSCCEEEEEE
T ss_pred EEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC-------CCeEEEEeCCCCEEeeeee
Confidence 99987 443 432 1111111 221 2 2222 268999975542 1468888887542 433
Q ss_pred CCCCCCCceee-EEEEE-CC-EEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecccc--cc--CCCCCCeE--E
Q 042957 173 LPNMSTLRYKC-VGVTW-QG-KIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARM--WQ--LDIPPNQI--V 243 (371)
Q Consensus 173 ~~~~p~~~~~~-~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~--~~--~~~~~~~~--~ 243 (371)
-.+....+.+. .++.. ++ .|++..+ . ..+..||+.+.....++.. .. ......++ .
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~--------------g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~ 241 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAFGG-P--------------RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTV 241 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEESS-S--------------SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEE
T ss_pred cCCCcccccCcceEEEeCCCCEEEEEcC-C--------------CeEEEEcCCCCcceeecccccCCcccccCccccccc
Confidence 22222234333 33444 34 5666554 2 3688999885322112110 00 01111232 2
Q ss_pred EECCEEEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEee----eCCeEEEEc
Q 042957 244 EVDNRLFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAP----IGTHLYFLA 319 (371)
Q Consensus 244 ~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~----~~~~l~v~G 319 (371)
..+++++++....+ .+.++-...+ |+...-. ...+.. ..++...+.+. .+++||++.
T Consensus 242 ~~~G~vllV~~~~~----~~~~l~S~Dg-W~sa~~~--g~~~~~------------~~~~g~tt~t~~~~~~~~~iYvv~ 302 (334)
T 2p9w_A 242 PVGNESVLVGARAP----YAISFRSWDN-WKSANIK--KTKRSE------------LQNSGFTAVADYYQGSEQGLYAVS 302 (334)
T ss_dssp EETTEEEEEEEETT----EEEEEECSST-TSEEEEE--EEECGG------------GGSSCEEEEEEEEETTEEEEEEEE
T ss_pred ccCCEEEEEEcCCC----CEEEEECCCC-cceeEEe--eeecCc------------cccCceeEEEEeccccCCeEEEEe
Confidence 36888866643222 2444444444 9886221 222211 01133333333 678999988
Q ss_pred ceeecccccceeeEEEEeecc
Q 042957 320 GYRMAGELARTMSMVHIFDTA 340 (371)
Q Consensus 320 G~~~~~~~~~~~~~v~~~d~~ 340 (371)
+.-..+ .....+..-++|+.
T Consensus 303 ~~f~~~-~~g~r~~f~~~di~ 322 (334)
T 2p9w_A 303 AFFDNG-AHGGRSDYPLYKLD 322 (334)
T ss_dssp CCGGGT-TTSCCCCEEEEECC
T ss_pred eecCCc-ccCCcceeechhhh
Confidence 654422 12233444445543
No 302
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=56.71 E-value=1.2e+02 Score=27.89 Aligned_cols=72 Identities=10% Similarity=0.033 Sum_probs=39.6
Q ss_pred CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CC-EEEEEcCCCCCccCeEEE
Q 042957 189 QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DN-RLFSSGDCLKAWKGHIES 265 (371)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~ 265 (371)
++++|+.-.......... ..+.+.++|+++.+-... ++.+..+ .++++. ++ .+|+..... +.+.+
T Consensus 330 g~rlyVa~~~~~~gthk~-----~s~~VsVID~~T~kvv~~--I~vg~~P-~gia~spDg~~~lyv~n~~s----~~VsV 397 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKA-----ASRFVVVLNAETGERINK--IELGHEI-DSINVSQDAEPLLYALSAGT----QTLHI 397 (426)
T ss_dssp GTEEEEEEEECCTTCTTS-----CEEEEEEEETTTCCEEEE--EEEEEEE-CEEEECCSSSCEEEEEETTT----TEEEE
T ss_pred CCEEEEEecccccccccC-----CCCEEEEEECCCCeEEEE--EECCCCc-CeEEEccCCCEEEEEEcCCC----CeEEE
Confidence 578999864321110000 136799999988764333 2222222 344444 34 567664333 36999
Q ss_pred EeCCCCc
Q 042957 266 YDGELNM 272 (371)
Q Consensus 266 yd~~~~~ 272 (371)
+|..+.+
T Consensus 398 ID~~t~k 404 (426)
T 3c75_H 398 YDAATGE 404 (426)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9998744
No 303
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=56.58 E-value=40 Score=30.12 Aligned_cols=114 Identities=11% Similarity=0.069 Sum_probs=54.1
Q ss_pred CeeEEEECCCC--ceeeccccccCCC-CCCeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCCCCccc
Q 042957 214 SSAEVYDTQAG--KWDLVARMWQLDI-PPNQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVST 290 (371)
Q Consensus 214 ~~v~~yd~~t~--~W~~~~~~~~~~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~ 290 (371)
..++.+|.+++ .|+.-.....+.. ........++.+|++....+ ..++.||.++..|+-- ...+.+-..
T Consensus 20 G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~d---G~l~a~~~~~G~~~~~--~~~~~lv~~--- 91 (339)
T 2be1_A 20 GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGD---GNIYYFNAHQGLQKLP--LSIRQLVST--- 91 (339)
T ss_dssp SCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTT---TEEEEEETTTEEEEEE--EEHHHHHTT---
T ss_pred CeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCC---CEEEEEECCCCcEEee--eccccceec---
Confidence 46788887766 4775433100000 00001113567777653211 2599999988766532 001121100
Q ss_pred CCCCCCCCCCceeeeeeEee------eCCeEEEEcceeecccccceeeEEEEeecccccccccccCccc
Q 042957 291 SSTNTEDWPPIQRLYLTMAP------IGTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIV 353 (371)
Q Consensus 291 ~~~~~~~~~p~~r~~~~~~~------~~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p 353 (371)
.| .|.....++ ..+..+++|+.+ ..++..|+.+....|+.-...|
T Consensus 92 --------SP-~~~~~~pvv~~~~~~~~~g~Vy~Gs~~---------g~l~ald~~tG~~~W~~~~~~~ 142 (339)
T 2be1_A 92 --------SP-LHLKTNIVVNDSGKIVEDEKVYTGSMR---------TIMYTINMLNGEIISAFGPGSK 142 (339)
T ss_dssp --------CS-EEEECC----------CCEEEEECEEE---------EEEEEEETTTCCEEEEESTTCB
T ss_pred --------cc-cccCCCceeecccccccCCEEEEEecC---------CEEEEEECCCCcEEEEEecCCC
Confidence 00 121111222 144444556543 3678888888777787764433
No 304
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=55.57 E-value=89 Score=25.95 Aligned_cols=59 Identities=8% Similarity=-0.028 Sum_probs=36.5
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeC----C-CCCC------CceeeEEEE--ECCEEEEEecccCCCCCC
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPL----P-NMST------LRYKCVGVT--WQGKIHVVSGFAQRADSD 205 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~----~-~~p~------~~~~~~~~~--~~~~lyv~GG~~~~~~~~ 205 (371)
++++|+|-|. ..++||..+++...- . ..|. +..--++.. .++++|+|-|
T Consensus 127 ~gk~yfFkG~----------~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------- 188 (225)
T 3oyo_A 127 GKEVYLFKGN----------KYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------- 188 (225)
T ss_dssp TTEEEEEETT----------EEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--------
T ss_pred CCcEEEEeCC----------eEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--------
Confidence 6899999774 478888776655431 1 1221 111122333 3789999986
Q ss_pred CCccccccCeeEEEECCC
Q 042957 206 GSVHFTERSSAEVYDTQA 223 (371)
Q Consensus 206 ~~~~~~~~~~v~~yd~~t 223 (371)
+..++||..+
T Consensus 189 --------~~ywr~d~~~ 198 (225)
T 3oyo_A 189 --------QNYVRIDFTP 198 (225)
T ss_dssp --------TEEEEEECCT
T ss_pred --------CEEEEEeCCc
Confidence 4678888873
No 305
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=52.82 E-value=1.7e+02 Score=28.35 Aligned_cols=157 Identities=11% Similarity=0.011 Sum_probs=81.5
Q ss_pred cceEEEEECCCCeeeecCCCCCCCCCeeEEE----ECCEEEEEcCC---------CCCCCCCCCceEEEEeCCCCc--eE
Q 042957 107 LAWVLRYNVKSNEWTRCAPLSVPRYDFACTV----CDNKIYVAGGK---------SNLFSAKGTASAEVYHPELDQ--WT 171 (371)
Q Consensus 107 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~----~~~~lyv~GG~---------~~~~~~~~~~~~~~yd~~t~~--W~ 171 (371)
...+.+.|+.+.+-.++-.+|....-|.++. -+++||+.+-. .-....+..+.+-+.|..+.+ |+
T Consensus 111 ~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~q 190 (595)
T 1fwx_A 111 NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQ 190 (595)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEE
Confidence 5779999999988655445665555566664 35788887532 111122344578889998763 33
Q ss_pred eCCCCCCCceeeEEEEE-CCEEEEEecccCCCCCC--------C---------------CccccccCeeEEEECCCCcee
Q 042957 172 PLPNMSTLRYKCVGVTW-QGKIHVVSGFAQRADSD--------G---------------SVHFTERSSAEVYDTQAGKWD 227 (371)
Q Consensus 172 ~~~~~p~~~~~~~~~~~-~~~lyv~GG~~~~~~~~--------~---------------~~~~~~~~~v~~yd~~t~~W~ 227 (371)
-.- . +......+.. +..+|+..-........ + ...+...+.+-+.|+++.+.+
T Consensus 191 I~V--g-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~ 267 (595)
T 1fwx_A 191 VLV--S-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASS 267 (595)
T ss_dssp EEE--S-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCC
T ss_pred EEe--C-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCc
Confidence 211 0 1111122222 23344444222110000 0 000012356888999984433
Q ss_pred e-ccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 228 L-VARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 228 ~-~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
. +...+.+.. .|++... +..+|+.+...+ .+.+||.++.
T Consensus 268 ~~~~~Ipvg~~-PhGv~~sPDGk~v~V~~~~s~----~VsVid~~~~ 309 (595)
T 1fwx_A 268 LFTRYIPIANN-PHGCNMAPDKKHLCVAGKLSP----TVTVLDVTRF 309 (595)
T ss_dssp SSEEEEEEESS-CCCEEECTTSSEEEEECTTSS----BEEEEEGGGH
T ss_pred eeEEEEecCCC-ceEEEEcCCCCEEEEeCCCCC----eEEEEECccc
Confidence 3 334444433 3555554 445667655444 5999999864
No 306
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=52.26 E-value=1.2e+02 Score=26.53 Aligned_cols=56 Identities=11% Similarity=-0.007 Sum_probs=26.8
Q ss_pred eeEEEECC-CCceeeccc-cccCCCCCCeEEE-E----CCEEEEEcCCCCCccCeEEEEeCCCCceE
Q 042957 215 SAEVYDTQ-AGKWDLVAR-MWQLDIPPNQIVE-V----DNRLFSSGDCLKAWKGHIESYDGELNMWD 274 (371)
Q Consensus 215 ~v~~yd~~-t~~W~~~~~-~~~~~~~~~~~~~-~----~~~iyv~GG~~~~~~~~~~~yd~~~~~W~ 274 (371)
.+.+|++. +++...+.. .+........++. - ++.||+.+... +.+.+|+.+.+.-+
T Consensus 283 ~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~----~~v~v~~~~~~~l~ 345 (365)
T 1jof_A 283 YIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE----GWLEIYRWKDEFLH 345 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS----CEEEEEEEETTEEE
T ss_pred eEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCC----CeEEEEEEchhhCc
Confidence 68888875 555544221 1111111122222 2 45566654322 25888877665333
No 307
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=51.53 E-value=1.8e+02 Score=28.20 Aligned_cols=67 Identities=13% Similarity=-0.126 Sum_probs=34.0
Q ss_pred eEEEEECCCCeeeecCCCCCC---CCCeeEEEECCEEEEEcCCCCC-CCCCCCceEEEEeCCCCceEeCCC
Q 042957 109 WVLRYNVKSNEWTRCAPLSVP---RYDFACTVCDNKIYVAGGKSNL-FSAKGTASAEVYHPELDQWTPLPN 175 (371)
Q Consensus 109 ~v~~yd~~~~~W~~~~~~~~~---r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~~~yd~~t~~W~~~~~ 175 (371)
.++++|+.+++-..+-..... ........-+++.++++..+.. ........++++|..+.+-+.+..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 108 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP 108 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC
Confidence 577777776654333221111 1122222336665555543211 111234689999999887666643
No 308
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=50.82 E-value=2e+02 Score=28.55 Aligned_cols=149 Identities=9% Similarity=-0.047 Sum_probs=76.2
Q ss_pred cceEEEEECCCC--ee--eecCCCCCCCCCeeEE-EECCEEEEEcCCCCCCCCCCCceEEEEeCCC-CceEe-CCCCCCC
Q 042957 107 LAWVLRYNVKSN--EW--TRCAPLSVPRYDFACT-VCDNKIYVAGGKSNLFSAKGTASAEVYHPEL-DQWTP-LPNMSTL 179 (371)
Q Consensus 107 ~~~v~~yd~~~~--~W--~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~W~~-~~~~p~~ 179 (371)
.+++|.+|..+. ++ +.+.+-.. ...+... ..++.||+..-.+. .....++.+|..+ ..|+. +-+-...
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~----a~~~~L~~~d~~~~~~~~~~li~~~~~ 368 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGG----AVNHKLLIAPRGQPSDWSHVLVDHSED 368 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTT----CTTCEEEEEETTSTTCCCCEEECCCSS
T ss_pred CceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCC----CCCcEEEEEcCCCcccceeeEECCCCC
Confidence 467888888765 45 55432111 1112222 33788888865431 1235788999876 67876 4322222
Q ss_pred ceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEEC-------CCCc-eeeccccccCCCCCCeEEE-------
Q 042957 180 RYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDT-------QAGK-WDLVARMWQLDIPPNQIVE------- 244 (371)
Q Consensus 180 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~-------~t~~-W~~~~~~~~~~~~~~~~~~------- 244 (371)
..-......++.|++.....+ ...++++|+ .+.. -..+. ++... .....
T Consensus 369 ~~l~~~~~~~~~lv~~~~~~g------------~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~~---~~~~~~~~~~~~ 432 (751)
T 2xe4_A 369 VFMESIAVRSNYLVVAGRRAG------------LTRIWTMMADSQDGVFKAGTGLREVV-MEEPI---FTVHLVESQMLE 432 (751)
T ss_dssp EEEEEEEECSSEEEEEEEETT------------EEEEEEEECCTTTSCCCTTTCCEECC-CCCSS---CEEEECGGGCCC
T ss_pred cEEEEEEEECCEEEEEEEeCC------------EEEEEEEecccccccccCCccceEEC-CCCce---eEEEeccCcccC
Confidence 222223345677777664332 246888886 3333 33332 22111 11111
Q ss_pred EC-CEEEEEcCCCCCccCeEEEEeCCCCceEeec
Q 042957 245 VD-NRLFSSGDCLKAWKGHIESYDGELNMWDEVN 277 (371)
Q Consensus 245 ~~-~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~ 277 (371)
.+ +.+++... .......++.||+.+++.+.+.
T Consensus 433 ~~~~~l~~~~s-s~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 433 YEEPTFRMEYS-SLATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp TTCSCEEEEEE-ETTEEEEEEEECTTTCCEEEEE
T ss_pred CCCCEEEEEEe-CCCCCCEEEEEECCCCcEEEEe
Confidence 12 33433321 1122246899999988877773
No 309
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=49.11 E-value=1.3e+02 Score=29.30 Aligned_cols=21 Identities=5% Similarity=0.061 Sum_probs=16.1
Q ss_pred ECCEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 245 VDNRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 245 ~~~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
.++++|+|-|. ..++||..++
T Consensus 547 ~~gktYFFkG~------~ywryd~~~~ 567 (631)
T 1ck7_A 547 KNKKTYIFAGD------KFWRYNEVKK 567 (631)
T ss_dssp TTCEEEEEETT------EEEEEETTTT
T ss_pred CCCeEEEEECC------EEEEEcCCcc
Confidence 36899999663 5999998765
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=47.87 E-value=2e+02 Score=27.87 Aligned_cols=140 Identities=11% Similarity=0.007 Sum_probs=77.2
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEEE--CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEE
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTVC--DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVG 185 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~ 185 (371)
.++.++|+.+..-..+-+++.-+.-.+++.. +++||+.--. ...+.++++.....+.+....... -..+
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~--------~~~I~r~~~~g~~~~~v~~~g~~~-P~Gl 85 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS--------LKTISRAFMNGSALEHVVEFGLDY-PEGM 85 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECSSCSC-CCEE
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC--------CCeEEEEECCCCCcEEEEeCCCCC-cceE
Confidence 4577777766543333233222233344443 6899998433 257888888766555543222111 1233
Q ss_pred EE--ECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEc-CCCCCcc
Q 042957 186 VT--WQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSG-DCLKAWK 260 (371)
Q Consensus 186 ~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~G-G~~~~~~ 260 (371)
++ .+++||+.-.. ...|+++++....-+.+.. ... ..+.++++. ++.||+.- |. .
T Consensus 86 AvD~~~~~LY~tD~~--------------~~~I~v~~~dG~~~~~l~~-~~l-~~P~~iavdp~~G~lY~tD~g~----~ 145 (628)
T 4a0p_A 86 AVDWLGKNLYWADTG--------------TNRIEVSKLDGQHRQVLVW-KDL-DSPRALALDPAEGFMYWTEWGG----K 145 (628)
T ss_dssp EEETTTTEEEEEETT--------------TTEEEEEETTSTTCEEEEC-SSC-CCEEEEEEETTTTEEEEEECSS----S
T ss_pred EEEeCCCEEEEEECC--------------CCEEEEEecCCCcEEEEEe-CCC-CCcccEEEccCCCeEEEeCCCC----C
Confidence 33 47899998531 2578899987654333221 111 112355555 68899875 32 2
Q ss_pred CeEEEEeCCCCceEee
Q 042957 261 GHIESYDGELNMWDEV 276 (371)
Q Consensus 261 ~~~~~yd~~~~~W~~~ 276 (371)
..|++.++....-+.+
T Consensus 146 ~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 146 PKIDRAAMDGSERTTL 161 (628)
T ss_dssp CEEEEEETTSCSCEEE
T ss_pred CEEEEEeCCCCceEEE
Confidence 3588888877665554
No 311
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=47.05 E-value=2.5e+02 Score=28.59 Aligned_cols=24 Identities=4% Similarity=-0.087 Sum_probs=17.7
Q ss_pred CCEEEEEcCCCCCccCeEEEEeCCCCce
Q 042957 246 DNRLFSSGDCLKAWKGHIESYDGELNMW 273 (371)
Q Consensus 246 ~~~iyv~GG~~~~~~~~~~~yd~~~~~W 273 (371)
+++.++.|+.++ .+.+||..+.+-
T Consensus 222 dg~~lasgs~Dg----~i~lWd~~~g~~ 245 (902)
T 2oaj_A 222 NSLHIITIHEDN----SLVFWDANSGHM 245 (902)
T ss_dssp TSSEEEEEETTC----CEEEEETTTCCE
T ss_pred CCCEEEEEECCC----eEEEEECCCCcE
Confidence 567777777655 499999987654
No 312
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=47.00 E-value=1.6e+02 Score=26.30 Aligned_cols=28 Identities=11% Similarity=0.051 Sum_probs=18.1
Q ss_pred CCEEEEEcCCC-----CCccCeEEEEeCCCCce
Q 042957 246 DNRLFSSGDCL-----KAWKGHIESYDGELNMW 273 (371)
Q Consensus 246 ~~~iyv~GG~~-----~~~~~~~~~yd~~~~~W 273 (371)
++++|+..... ....+.++++|+++.+-
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v 310 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT 310 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEE
Confidence 57899875321 11235799999987544
No 313
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=44.73 E-value=1.6e+02 Score=25.85 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=41.7
Q ss_pred CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEE
Q 042957 189 QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESY 266 (371)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~y 266 (371)
++++|+....+........ ..+.+.++|+++.+ .+..++... ..+++.. ++.||+.++ +.+.+|
T Consensus 265 g~~lyv~~~~~~~~~~~~~----~~~~v~viD~~t~~--~v~~i~~~~--p~~ia~spdg~~l~v~n~------~~v~v~ 330 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKF----PAAEIWVMDTKTKQ--RVARIPGRD--ALSMTIDQQRNLMLTLDG------GNVNVY 330 (361)
T ss_dssp TTEEEEEEESSCCTTCTTC----CCSEEEEEETTTTE--EEEEEECTT--CCEEEEETTTTEEEEECS------SCEEEE
T ss_pred CCeEEEEEccCCCcccccC----CCceEEEEECCCCc--EEEEEecCC--eeEEEECCCCCEEEEeCC------CeEEEE
Confidence 4789987642211100000 12589999999875 333344333 3455554 456776543 469999
Q ss_pred eCCCCceEee
Q 042957 267 DGELNMWDEV 276 (371)
Q Consensus 267 d~~~~~W~~~ 276 (371)
|.++..-+.+
T Consensus 331 D~~t~~l~~~ 340 (361)
T 2oiz_A 331 DISQPEPKLL 340 (361)
T ss_dssp ECSSSSCEEE
T ss_pred ECCCCcceee
Confidence 9988532555
No 314
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=43.77 E-value=1.7e+02 Score=26.84 Aligned_cols=133 Identities=13% Similarity=0.017 Sum_probs=66.2
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEEE-ECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceE---eCCCCCCCceee
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACTV-CDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWT---PLPNMSTLRYKC 183 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~---~~~~~p~~~~~~ 183 (371)
..++++|+.+++...+... . ..-..+++ .+++||+.--... .....+..++... .+. .++.+..+ .
T Consensus 162 ~~I~~id~~~g~v~~~~~~-~-~~P~giavd~dG~lyVad~~~~----~~~~gv~~~~~~~-~~~~~~~~~~~~~P---~ 231 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTTN-I-GQCADVNFTLNGDMVVVDDQSS----DTNTGIYLFTRAS-GFTERLSLCNARGA---K 231 (433)
T ss_dssp SCEEEEETTTTEEEEECCC-C-SCEEEEEECTTCCEEEEECCSC----TTSEEEEEECGGG-TTCCEEEEEECSSB---C
T ss_pred CCEEEEECCCCEEEEeecC-C-CCccEEEECCCCCEEEEcCCCC----cccceEEEEECCC-CeeccccccccCCC---C
Confidence 6799999988887766431 1 11122332 2556888743211 1123355555432 221 22211111 1
Q ss_pred EEEEE--CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCce-eeccccccCCCCCCeEEEE--CCEEEEEcCCCCC
Q 042957 184 VGVTW--QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKW-DLVARMWQLDIPPNQIVEV--DNRLFSSGDCLKA 258 (371)
Q Consensus 184 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~ 258 (371)
.+++. ++.||+.-.. ...+++||+.+... +.+........ ...++.. ++.||+.--.
T Consensus 232 giavd~~~G~lyv~d~~--------------~~~V~~~d~~~g~~~~~~~~~~~~~~-~~~ia~dpdG~~LYvad~~--- 293 (433)
T 4hw6_A 232 TCAVHPQNGKIYYTRYH--------------HAMISSYDPATGTLTEEEVMMDTKGS-NFHIVWHPTGDWAYIIYNG--- 293 (433)
T ss_dssp CCEECTTTCCEEECBTT--------------CSEEEEECTTTCCEEEEEEECSCCSS-CEEEEECTTSSEEEEEETT---
T ss_pred EEEEeCCCCeEEEEECC--------------CCEEEEEECCCCeEEEEEeccCCCCC-cccEEEeCCCCEEEEEeCC---
Confidence 22332 6778877531 24789999987765 33322221111 1134443 3459988432
Q ss_pred ccCeEEEEeCC
Q 042957 259 WKGHIESYDGE 269 (371)
Q Consensus 259 ~~~~~~~yd~~ 269 (371)
.+.|+++|..
T Consensus 294 -~~~I~~~~~d 303 (433)
T 4hw6_A 294 -KHCIYRVDYN 303 (433)
T ss_dssp -TTEEEEEEBC
T ss_pred -CCEEEEEeCC
Confidence 2358887755
No 315
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=43.64 E-value=2.5e+02 Score=27.73 Aligned_cols=201 Identities=15% Similarity=0.167 Sum_probs=99.6
Q ss_pred eeEEeCCCCceeccCCCCcccccccccceEEEEE---CCEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 40 LASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSL---GDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 40 ~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
+++.+-.-.+|+.+.+.+....-......++++. .+.||+..|..... .......+++=.-.
T Consensus 47 v~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~---------------~~~~~~~l~~S~Dg 111 (737)
T 2cn3_A 47 AYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTND---------------WLPNMGAILRSTDR 111 (737)
T ss_dssp EEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSS---------------SSCCCCEEEEESSS
T ss_pred EEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccc---------------cccCCccEEEeCCC
Confidence 8899888899999876331110000112234443 25799886642100 00112345544444
Q ss_pred CCeeeecCCC-C-----CCC-CCeeEEEE---CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCc------
Q 042957 117 SNEWTRCAPL-S-----VPR-YDFACTVC---DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLR------ 180 (371)
Q Consensus 117 ~~~W~~~~~~-~-----~~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~------ 180 (371)
-.+|+++... + ..+ ..+.+++. .+.||+.... + ..+++=+-.-.+|+++..+|...
T Consensus 112 G~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~-g-------~gl~~S~DgG~tW~~~~~~~~~~~~~~~p 183 (737)
T 2cn3_A 112 GETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC-G-------NGLWRSTDYGVTWSKVESFPNPGTYIYDP 183 (737)
T ss_dssp SSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST-T-------CCEEEESSTTSSCEECTTCCCCCCCBSCT
T ss_pred CCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc-C-------CcEEEeCCCCcceecccCCCCCcccccCc
Confidence 5689887431 1 112 12344442 2566664211 0 22444444456899987665421
Q ss_pred --------eeeEEEEEC----------CEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeE
Q 042957 181 --------YKCVGVTWQ----------GKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQI 242 (371)
Q Consensus 181 --------~~~~~~~~~----------~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~ 242 (371)
.....+.++ +.||+.-.... ..+++=.-.-.+|+.+..++..... +.+
T Consensus 184 ~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~-------------~~v~~S~DgG~tW~~~~~~p~~~~~-~~~ 249 (737)
T 2cn3_A 184 NFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN-------------ESIYRSTDGGVTWKAVPGQPKGLLP-HHG 249 (737)
T ss_dssp TSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS-------------CCEEEESSTTSCCEECTTCCCSSEE-EEE
T ss_pred ccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC-------------ccEEEEcCCCCceEECCCCCCcccc-eEE
Confidence 011112221 25665431110 1233222234579998866543221 223
Q ss_pred EEE-CCEEEEEcCCC-----CCccCeEEEEeCCCCceEeec
Q 042957 243 VEV-DNRLFSSGDCL-----KAWKGHIESYDGELNMWDEVN 277 (371)
Q Consensus 243 ~~~-~~~iyv~GG~~-----~~~~~~~~~yd~~~~~W~~~~ 277 (371)
+.. ++.+|+..+.. ......+++++-...+|+.+.
T Consensus 250 ~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~ 290 (737)
T 2cn3_A 250 VLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDIT 290 (737)
T ss_dssp EECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECC
T ss_pred EECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEcc
Confidence 222 67888764321 112346999999999999993
No 316
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=42.99 E-value=2.6e+02 Score=27.68 Aligned_cols=151 Identities=5% Similarity=-0.113 Sum_probs=79.5
Q ss_pred cceEEEEECCC--CeeeecCCCCCCCCCeeEEEECCEEEEEcCCCCC--CCCCCCceEEEEeCCC--------CceEe-C
Q 042957 107 LAWVLRYNVKS--NEWTRCAPLSVPRYDFACTVCDNKIYVAGGKSNL--FSAKGTASAEVYHPEL--------DQWTP-L 173 (371)
Q Consensus 107 ~~~v~~yd~~~--~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~--~~~~~~~~~~~yd~~t--------~~W~~-~ 173 (371)
.++++..|... .+|.++. .|+....+...++++|+....+-. +......++...|..+ ..|+. +
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKIN---MPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF 344 (711)
T ss_dssp CEEEEEEECSSSSCEEEECC---SCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE
T ss_pred ceeEEEEcCCCCCCcceEee---cCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE
Confidence 36677777653 5677762 233222245679999997643210 0111345677787654 46887 4
Q ss_pred CCCCCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeecc--ccccCCCCCCeEEEE---CCE
Q 042957 174 PNMSTLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVA--RMWQLDIPPNQIVEV---DNR 248 (371)
Q Consensus 174 ~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~--~~~~~~~~~~~~~~~---~~~ 248 (371)
.+-. .+.-..+...++.|++..-..+ ...+.++|+.++.|.... .+|.. ........ ++.
T Consensus 345 ~~~~-~~~l~~~~~~~~~l~~~~~~~~------------~~~l~~~~~~~g~~~~~~~i~lp~~--~~~~~~~~~~~~~~ 409 (711)
T 4hvt_A 345 TPTA-NEVFNFISTTKDRVFLATYDNV------------VAKVVTFTLENEQWTKPVVLKLPYQ--NAIFGMSSYEEEEE 409 (711)
T ss_dssp CCCT-TEEEEEEEECSSCEEEEEEETT------------EEEEEEECEETTEECCCEEECCCST--TCEEEEECCTTCSC
T ss_pred CCCC-CCeEEEEEEECCEEEEEEEECC------------EEEEEEEECCCCceEEEeccCCCCC--eEEEEEeecCcCCE
Confidence 3322 2222233455677776653332 246888998888875322 23321 11111111 234
Q ss_pred EEEEcCCCCCccCeEEEEeCCCCceEeec
Q 042957 249 LFSSGDCLKAWKGHIESYDGELNMWDEVN 277 (371)
Q Consensus 249 iyv~GG~~~~~~~~~~~yd~~~~~W~~~~ 277 (371)
+++... .......++.||+. .+++.+.
T Consensus 410 ~~~~~s-s~~~P~~~~~~d~~-~~~~~l~ 436 (711)
T 4hvt_A 410 ALITIE-NSIVPPTIYLWVKT-HELKIIR 436 (711)
T ss_dssp EEEEEE-CSSSCCEEEEECTT-SCEEEEE
T ss_pred EEEEEe-cCCCCCEEEEEeCC-CcEEEEe
Confidence 443322 12223579999988 7777773
No 317
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=39.22 E-value=3e+02 Score=27.25 Aligned_cols=60 Identities=10% Similarity=0.023 Sum_probs=34.6
Q ss_pred CeeEEEECCCC--ce--eeccccccCCCCCCeEE-EECCEEEEEcCCCCCccCeEEEEeCCC-CceEe
Q 042957 214 SSAEVYDTQAG--KW--DLVARMWQLDIPPNQIV-EVDNRLFSSGDCLKAWKGHIESYDGEL-NMWDE 275 (371)
Q Consensus 214 ~~v~~yd~~t~--~W--~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~yd~~~-~~W~~ 275 (371)
..++.+|+.+. .+ +.+..-. ........ ..+++||+...........++++|..+ ..|+.
T Consensus 295 ~~l~~~d~~~~~~~~~~~~l~~~~--~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~ 360 (751)
T 2xe4_A 295 AEVHLLDLRKGNAHNTLEIVRPRE--KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSH 360 (751)
T ss_dssp EEEEEEESSSCTTCCCEEESSCCC--TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCC
T ss_pred ceEEEEECCCCCCCceeEEeecCC--CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCccccee
Confidence 57888999875 45 4443211 11111222 237888888654312234799999886 67876
No 318
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=36.26 E-value=3.4e+02 Score=27.10 Aligned_cols=197 Identities=14% Similarity=0.190 Sum_probs=98.1
Q ss_pred eeEEeCCCCceeccCCCCcccccccccceEEEEEC---CEEEEEcCcccccCCCCCCCCCCccccccccccceEEEEECC
Q 042957 40 LASYNPSNNTWSHVSHIPDLLENHVLKGFSIVSLG---DSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAWVLRYNVK 116 (371)
Q Consensus 40 ~~~yd~~~~~W~~~~~~~~~~~~~~r~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 116 (371)
+++-+-.-.+|+.+........-..+..+++++.. +.+|+..|.... .....+++=+-.
T Consensus 39 v~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~------------------~~~~~v~~S~Dg 100 (789)
T 1sqj_A 39 AYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG------------------DEWAAFYVSEDR 100 (789)
T ss_dssp EEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT------------------SSCCEEEEESST
T ss_pred EEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCC------------------CcccEEEEECCC
Confidence 77777777889998653211100112334555442 468887664200 001445554445
Q ss_pred CCeeeecCC-CC-----CCC-CCeeEEEE---CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCC---Cceee
Q 042957 117 SNEWTRCAP-LS-----VPR-YDFACTVC---DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMST---LRYKC 183 (371)
Q Consensus 117 ~~~W~~~~~-~~-----~~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~---~~~~~ 183 (371)
-.+|+++.. ++ ..| ....+++. .+.||+ |... ..+++=+-.-.+|+++..+|. .-...
T Consensus 101 G~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~-g~~~--------~gl~~S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 101 GQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWM-GTRT--------EGIWKSSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp TSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEE-ECSS--------SCEEEESSTTSSCEEETTSCCCCSTTTCE
T ss_pred CCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEE-Eecc--------CCEEEECCCCcccCCCccCccccCCCCCe
Confidence 568988743 11 122 12344443 345665 3321 235554445578999876542 11222
Q ss_pred EEEEE----CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCC-------C--------CCCeEEE
Q 042957 184 VGVTW----QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLD-------I--------PPNQIVE 244 (371)
Q Consensus 184 ~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~-------~--------~~~~~~~ 244 (371)
..+.+ .+.||+..... ..+++=.-.-.+|+.+..++... . ..+.+++
T Consensus 172 ~~i~~~p~~~~~~~~~~~~~--------------~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATAP--------------QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKV 237 (789)
T ss_dssp EEEEECTTSTTCEEEEESST--------------TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEE
T ss_pred EEEEECCCCCCEEEEEEcCC--------------CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEE
Confidence 22222 24677755311 12222222334798887444321 0 0123333
Q ss_pred E--CCEEEEEcCCC----CCccCeEEEEeCCCCceEeec
Q 042957 245 V--DNRLFSSGDCL----KAWKGHIESYDGELNMWDEVN 277 (371)
Q Consensus 245 ~--~~~iyv~GG~~----~~~~~~~~~yd~~~~~W~~~~ 277 (371)
. ++.||+..+.. ......+++.+-...+|+.+.
T Consensus 238 ~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~ 276 (789)
T 1sqj_A 238 ALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDIT 276 (789)
T ss_dssp EECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECC
T ss_pred cCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECc
Confidence 2 78888873211 012245888888889999993
No 319
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=35.87 E-value=3.4e+02 Score=26.96 Aligned_cols=147 Identities=12% Similarity=0.051 Sum_probs=71.4
Q ss_pred eEEEEECCCCeeeecCC-C-----CC---CCCCeeEEEE----CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC
Q 042957 109 WVLRYNVKSNEWTRCAP-L-----SV---PRYDFACTVC----DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN 175 (371)
Q Consensus 109 ~v~~yd~~~~~W~~~~~-~-----~~---~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 175 (371)
.+++-+-...+|+++.. + +. .........+ .+.||+..|.-. .......+++-+-.-.+|+++..
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~--~~~~~~~i~~S~DgG~TW~~~~~ 121 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV--QWDPWAAFLVSDDRGKTFKQYRS 121 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT--TTCSCCEEEEESSTTSSCEEEEC
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc--cCCCCceEEEECCCCCCceeccC
Confidence 47777777889999865 3 21 1222222222 368888655311 00112345555555678998752
Q ss_pred -CC-----CCce-eeEEEEE---CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCCCCeE--E
Q 042957 176 -MS-----TLRY-KCVGVTW---QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIPPNQI--V 243 (371)
Q Consensus 176 -~p-----~~~~-~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~--~ 243 (371)
.+ ..+. ...+++. .+.+|+.+. . ..+++=+-.-.+|+++..++........+ +
T Consensus 122 ~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-~--------------~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i 186 (763)
T 3a0f_A 122 PVPMGANDMGRNGGERLAVNPHWTDELWFGSR-T--------------QGLWRSTDRAQTWSRMNQLPDSSTYGIGIISV 186 (763)
T ss_dssp SSCCCTTSTTTTSBCCEEECTTSTTCEEEECS-S--------------SCEEEESSTTSSCEECTTSCCCSCTTTCEEEE
T ss_pred CcccCccccCccccceEEECCCCCCEEEEEeC-C--------------CcEEEECCCCcCccccccCcccCCCccceEEE
Confidence 11 1221 1233433 356777541 1 12333333345899987665432211122 1
Q ss_pred EE----CCEEEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 244 EV----DNRLFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 244 ~~----~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
.+ .+.||+...... .+++=+=.-.+|+.+
T Consensus 187 ~~~p~~~~~~~~~~~~~g----~v~~S~DgG~tW~~~ 219 (763)
T 3a0f_A 187 IFDPKNVGTAYVASHAVG----GLWVTWDGGANWSQV 219 (763)
T ss_dssp EECSSSTTCEEEEESSTT----CEEEESSSSSSCEEC
T ss_pred EECCCCCCEEEEEEeCCC----eEEEECCCCCCcccc
Confidence 22 346776643211 243332234579998
No 320
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=34.82 E-value=2.8e+02 Score=25.78 Aligned_cols=73 Identities=10% Similarity=-0.028 Sum_probs=39.4
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCC----ceEeCCC---C--CCC--ceeeEEEEECCEEEEEecccCCCCCCCC
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELD----QWTPLPN---M--STL--RYKCVGVTWQGKIHVVSGFAQRADSDGS 207 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~----~W~~~~~---~--p~~--~~~~~~~~~~~~lyv~GG~~~~~~~~~~ 207 (371)
..+||+-|..+ +.++++|..++ +-.++.. + +.+ +-++..+.-++ |||..--+..+.
T Consensus 95 r~~l~v~~l~s--------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~---- 161 (462)
T 2ece_A 95 RRFLIVPGLRS--------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGE---- 161 (462)
T ss_dssp SCEEEEEBTTT--------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSC----
T ss_pred CCEEEEccCCC--------CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCC----
Confidence 45677766653 67999999876 3322211 1 112 22223334456 887432221111
Q ss_pred ccccccCeeEEEECCCCceee
Q 042957 208 VHFTERSSAEVYDTQAGKWDL 228 (371)
Q Consensus 208 ~~~~~~~~v~~yd~~t~~W~~ 228 (371)
....+.++|.++.+-..
T Consensus 162 ----~~g~v~vlD~~T~~v~~ 178 (462)
T 2ece_A 162 ----GPGGILMLDHYSFEPLG 178 (462)
T ss_dssp ----SCCEEEEECTTTCCEEE
T ss_pred ----CCCeEEEEECCCCeEEE
Confidence 23689999999876443
No 321
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=34.49 E-value=2.6e+02 Score=25.17 Aligned_cols=17 Identities=12% Similarity=0.026 Sum_probs=12.3
Q ss_pred ceEEEEE-CCEEEEEcCc
Q 042957 67 GFSIVSL-GDSVYIIGGL 83 (371)
Q Consensus 67 ~~~~~~~-~~~iyv~GG~ 83 (371)
.|+++.. +++||.+|-.
T Consensus 131 ~h~~alt~~G~v~~wG~n 148 (406)
T 4d9s_A 131 SHCLAVTMEGEVQSWGRN 148 (406)
T ss_dssp SEEEEEETTSCEEEEECC
T ss_pred hheEEEcCCCcEEEeCCC
Confidence 5666665 6799999843
No 322
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=30.65 E-value=3.8e+02 Score=25.91 Aligned_cols=78 Identities=1% Similarity=-0.110 Sum_probs=46.1
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEE----ECCEEEEEecccC----CCCCCCCccc
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVT----WQGKIHVVSGFAQ----RADSDGSVHF 210 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~----~~~~lyv~GG~~~----~~~~~~~~~~ 210 (371)
+.++|+.-.. ...+.+.|+.+.+-.++-.+|.+..-+.++. -.+.+|+.+.... ++..... .-
T Consensus 101 G~~lfVnd~~--------~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~-~~ 171 (595)
T 1fwx_A 101 GRFLFMNDKA--------NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED-VA 171 (595)
T ss_dssp EEEEEEEETT--------TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC-GG
T ss_pred CCEEEEEcCC--------CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc-cc
Confidence 4567774222 3679999999988777557776665555554 2456777754322 1110000 01
Q ss_pred cccCeeEEEECCCCc
Q 042957 211 TERSSAEVYDTQAGK 225 (371)
Q Consensus 211 ~~~~~v~~yd~~t~~ 225 (371)
...+.+-+.|.++.+
T Consensus 172 ~~~~~vtvID~~t~~ 186 (595)
T 1fwx_A 172 NYVNVFTAVDADKWE 186 (595)
T ss_dssp GEEEEEEEEETTTTE
T ss_pred ccCceEEEEECCCCe
Confidence 134578889999764
No 323
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=29.56 E-value=4.2e+02 Score=26.11 Aligned_cols=208 Identities=12% Similarity=0.038 Sum_probs=99.2
Q ss_pred ceEEEEECCCCeeeecCCCCCCC----CCe-eEEEE---CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCC-C--
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPR----YDF-ACTVC---DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPN-M-- 176 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r----~~~-~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~-~-- 176 (371)
..+|+.+-...+|+.+.+.+... ... ++++. .+.||+..|............+++=.-.-.+|+++.. .
T Consensus 45 ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~ 124 (737)
T 2cn3_A 45 GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKM 124 (737)
T ss_dssp SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCC
T ss_pred CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCccc
Confidence 35899988889999986643211 122 33332 3588887653210010111334444445678998742 1
Q ss_pred ----CCCceeeEEEEE---CCEEEEEecccCCCCCCCCccccccCeeEEEECCCCceeeccccccCCCC-----------
Q 042957 177 ----STLRYKCVGVTW---QGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGKWDLVARMWQLDIP----------- 238 (371)
Q Consensus 177 ----p~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~----------- 238 (371)
|.....+.+++. .+.||+... .+ ..+++=+-.-.+|+.+..++.....
T Consensus 125 ~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g-------------~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~ 190 (737)
T 2cn3_A 125 GGNMPGRSMGERLAIDPNDNRILYLGTR-CG-------------NGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKD 190 (737)
T ss_dssp CTTSTTTTSCCCEEECSSCTTCEEEECS-TT-------------CCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCS
T ss_pred CCCcCcccccceEEECCCCCCEEEEeec-cC-------------CcEEEeCCCCcceecccCCCCCcccccCcccccccC
Confidence 111122333432 245665321 10 1233322234579988765532110
Q ss_pred --CCeEEEEC----------CEEEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCCCCcccCCCCCCCCCCceeeee
Q 042957 239 --PNQIVEVD----------NRLFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYL 306 (371)
Q Consensus 239 --~~~~~~~~----------~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~ 306 (371)
....+.++ +.||+--.... ..+++=.=.-.+|+.+ ..++.. ...+
T Consensus 191 ~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~---~~v~~S~DgG~tW~~~-----~~~p~~---------------~~~~ 247 (737)
T 2cn3_A 191 IIGVVWVVFDKSSSTPGNPTKTIYVGVADKN---ESIYRSTDGGVTWKAV-----PGQPKG---------------LLPH 247 (737)
T ss_dssp BCCEEEEEECGGGSCTTSCCSCEEEEESCSS---CCEEEESSTTSCCEEC-----TTCCCS---------------SEEE
T ss_pred CCCEEEEEcCCCCcccCCCCCEEEEEecCCC---ccEEEEcCCCCceEEC-----CCCCCc---------------ccce
Confidence 01112232 25666421111 1243322234679998 545432 2223
Q ss_pred eEeee-CCeEEEEcceeecccccceeeEEEEeecccccccccccCcccc
Q 042957 307 TMAPI-GTHLYFLAGYRMAGELARTMSMVHIFDTAAKSDAWRSFEPIVE 354 (371)
Q Consensus 307 ~~~~~-~~~l~v~GG~~~~~~~~~~~~~v~~~d~~~~~~~W~~~~~~p~ 354 (371)
.++.. ++.||+..+.............++.++-... +|+.+...|.
T Consensus 248 ~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~--tW~~i~~~~~ 294 (737)
T 2cn3_A 248 HGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTG--EWIDITPIPY 294 (737)
T ss_dssp EEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTC--CEEECCSSCT
T ss_pred EEEECCCCeEEEEecCCCCccccccCceEEEEeCCCC--CEEEccCCCC
Confidence 33332 6788886532110000013456777777766 9999987764
No 324
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=29.33 E-value=2.8e+02 Score=23.95 Aligned_cols=122 Identities=12% Similarity=0.092 Sum_probs=61.9
Q ss_pred CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCC---C-CCceeeEEEEE--CCEEEEEecccCCCCCCCCccccc
Q 042957 139 DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNM---S-TLRYKCVGVTW--QGKIHVVSGFAQRADSDGSVHFTE 212 (371)
Q Consensus 139 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~---p-~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 212 (371)
++++|+...+... . ...++.++ +.+-...+.. + ........+.+ +++||++.-..... .
T Consensus 27 ~g~~~v~~~~~~~-~---~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~---------~ 91 (343)
T 2qe8_A 27 DGRLFLSLHQFYQ-P---EMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSK---------S 91 (343)
T ss_dssp TSCEEEEECGGGC-C---SCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHT---------S
T ss_pred CCCEEEEeCCCCC-C---ceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcC---------C
Confidence 6889887432110 1 14566666 3433333221 1 11122222333 57899986221000 1
Q ss_pred cCeeEEEECCCCceeecccccc----CCCCCCeEEEE--CCEEEEEcCCCCCccCeEEEEeCCCCc-eEee
Q 042957 213 RSSAEVYDTQAGKWDLVARMWQ----LDIPPNQIVEV--DNRLFSSGDCLKAWKGHIESYDGELNM-WDEV 276 (371)
Q Consensus 213 ~~~v~~yd~~t~~W~~~~~~~~----~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~yd~~~~~-W~~~ 276 (371)
...+.+||+++++-...-.++. .......+++- ++.+|+..-.. .....+.+||+.+.+ |+.+
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~-~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP-DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS-GGGCEEEEEETTTCCEEEEC
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc-CCCCeEEEEECCCCCEEEEe
Confidence 2579999999887443322221 11122355555 57898874310 022469999998654 5555
No 325
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=28.09 E-value=4.1e+02 Score=25.56 Aligned_cols=223 Identities=8% Similarity=-0.099 Sum_probs=0.0
Q ss_pred CCccccceeEEeCCCCce---eccCCCCcccccccccceEEEEECCEEEEEcCcccccCCCCCCCCCCccccccccccce
Q 042957 33 RSNISNWLASYNPSNNTW---SHVSHIPDLLENHVLKGFSIVSLGDSVYIIGGLLCHKERAHNSDESDDFVDAYDKVLAW 109 (371)
Q Consensus 33 ~~~~~~~~~~yd~~~~~W---~~~~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (371)
+......++.+|..+++. .++..-... ...+-+++..+++.. .+
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~---------~~~SPDG~~la~~~~------------------------~~ 131 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNELPRPIQY---------LCWSPVGSKLAYVYQ------------------------NN 131 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCSSBCC---------EEECSSTTCEEEEET------------------------TE
T ss_pred EeecceEEEEEECCCCccccceecCccccc---------ceECCCCCEEEEEEC------------------------Ce
Q ss_pred EEEEECCCCeeeecCCCCCCCC------------------CeeEEEECCEEEEEcCCCCCCCC-----------------
Q 042957 110 VLRYNVKSNEWTRCAPLSVPRY------------------DFACTVCDNKIYVAGGKSNLFSA----------------- 154 (371)
Q Consensus 110 v~~yd~~~~~W~~~~~~~~~r~------------------~~~~~~~~~~lyv~GG~~~~~~~----------------- 154 (371)
++.+|..+++-.++..-..... ......-+++.++++..+.....
T Consensus 132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Q ss_pred ---------CCCceEEEEeCCCCc---eEeCCCC-----CCCceeeEEEEECCEEEEEecccCCCCCCCCccccccCeeE
Q 042957 155 ---------KGTASAEVYHPELDQ---WTPLPNM-----STLRYKCVGVTWQGKIHVVSGFAQRADSDGSVHFTERSSAE 217 (371)
Q Consensus 155 ---------~~~~~~~~yd~~t~~---W~~~~~~-----p~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~ 217 (371)
.....++++|..+.+ |.++... ...........-++++++......... ..++
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~----------~~l~ 281 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNV----------SVLS 281 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTE----------EEEE
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCe----------EEEE
Q ss_pred EEE----CCCCceeeccc---cccCCCCC-----CeEEEECCEEEEEcCCCCCccCeEEEEeCCCCceEeecCcccccCC
Q 042957 218 VYD----TQAGKWDLVAR---MWQLDIPP-----NQIVEVDNRLFSSGDCLKAWKGHIESYDGELNMWDEVNGSCLQTLS 285 (371)
Q Consensus 218 ~yd----~~t~~W~~~~~---~~~~~~~~-----~~~~~~~~~iyv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~l~ 285 (371)
.+| +.+.++..+.. ........ .....-+++.+++-.........++.+|+.+...+.+ ..-.
T Consensus 282 ~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~l-----t~~~ 356 (719)
T 1z68_A 282 ICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQI-----TSGK 356 (719)
T ss_dssp EEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEEC-----SCSS
T ss_pred EEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEec-----ccCc
Q ss_pred CCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEc
Q 042957 286 SPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLA 319 (371)
Q Consensus 286 ~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~G 319 (371)
.. ....... -++.||+.+
T Consensus 357 ~~---------------v~~~~~~-d~~~i~~~~ 374 (719)
T 1z68_A 357 WE---------------AINIFRV-TQDSLFYSS 374 (719)
T ss_dssp SC---------------EEEEEEE-CSSEEEEEE
T ss_pred eE---------------EEEEEEE-eCCEEEEEE
No 326
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=27.53 E-value=3.5e+02 Score=24.48 Aligned_cols=52 Identities=12% Similarity=0.047 Sum_probs=27.8
Q ss_pred CeeEEEECCCCceeeccccccCCCCCCeEEEE-CCEEEEEcCCCCCccCeEEEEeCCCC
Q 042957 214 SSAEVYDTQAGKWDLVARMWQLDIPPNQIVEV-DNRLFSSGDCLKAWKGHIESYDGELN 271 (371)
Q Consensus 214 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~yd~~~~ 271 (371)
..+.+||+++..-.. ...... ....+++.. +++.++.|+.++ .+.+||+...
T Consensus 172 g~v~iwD~~~~~~~~-~~~~~~-~~v~~v~wspdg~~lasgs~dg----~v~iwd~~~~ 224 (434)
T 2oit_A 172 GSIAVLQVTETVKVC-ATLPST-VAVTSVCWSPKGKQLAVGKQNG----TVVQYLPTLQ 224 (434)
T ss_dssp SCEEEEEESSSEEEE-EEECGG-GCEEEEEECTTSSCEEEEETTS----CEEEECTTCC
T ss_pred CeEEEEEcCCCccee-eccCCC-CceeEEEEcCCCCEEEEEcCCC----cEEEEccCCc
Confidence 468889998773211 111111 111123222 566777776554 4999999843
No 327
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=25.66 E-value=5.1e+02 Score=25.80 Aligned_cols=63 Identities=13% Similarity=0.129 Sum_probs=35.4
Q ss_pred eEEEEECCCCeeeecCCCCC-----CCCCeeEEEE---CCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCC
Q 042957 109 WVLRYNVKSNEWTRCAPLSV-----PRYDFACTVC---DNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLP 174 (371)
Q Consensus 109 ~v~~yd~~~~~W~~~~~~~~-----~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~ 174 (371)
.+++-+-...+|+++...+. .+.-.++++. .+.||+..|... .. ....+++=+-.-.+|+++.
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~--~~-~~~~v~~S~DgG~TW~~~~ 108 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYV--GD-EWAAFYVSEDRGQSFTIYE 108 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCT--TS-SCCEEEEESSTTSEEEEEE
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccC--CC-cccEEEEECCCCCcceecc
Confidence 47777777789999865332 1223344443 257888766421 00 0134555555567899874
No 328
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=24.32 E-value=1.1e+02 Score=26.13 Aligned_cols=55 Identities=9% Similarity=0.137 Sum_probs=28.1
Q ss_pred CeeEEEECCEEEEEcCCCCCCCCCCCceEEEEeCCCCceEeCCCCCCCceeeEEEEECCEEEEEec
Q 042957 132 DFACTVCDNKIYVAGGKSNLFSAKGTASAEVYHPELDQWTPLPNMSTLRYKCVGVTWQGKIHVVSG 197 (371)
Q Consensus 132 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG 197 (371)
.|+++.-+++||.+|-..... . ... ......+..+-.+..+..+.. +++||..|-
T Consensus 190 ~hs~al~~G~v~~wG~n~~gq-l-g~p--------~~~~~~v~~i~~G~~h~~al~-~g~v~~wG~ 244 (282)
T 3qhy_B 190 FHSLALKDGKVIAWGDNRYKQ-T-TVP--------TEALSGVSAIASGEWYSLALK-NGKVIAWGS 244 (282)
T ss_dssp SEEEEEETTEEEEEECCTTST-T-CCC--------GGGGSSCCEEEECSSCEEEEE-TTEEEEEST
T ss_pred CEEEEEECCeEEEEECCCCCC-C-CCC--------cccCCCceEEEcCCCEEEEEE-CCEEEEecC
Confidence 455555788999998654211 1 000 011112222223344444445 999999984
No 329
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=23.27 E-value=4.1e+02 Score=23.93 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=25.7
Q ss_pred ceEEEEECCCCeeeecCCCCCCCCCeeEE--EECCEEEEEcCCCCCCCCCCCceEEEEeCC
Q 042957 108 AWVLRYNVKSNEWTRCAPLSVPRYDFACT--VCDNKIYVAGGKSNLFSAKGTASAEVYHPE 166 (371)
Q Consensus 108 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 166 (371)
..+..+|..+.+-.. .... .......+ .-+++.++.|+.+ ..+.+||..
T Consensus 172 g~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~d--------g~v~iwd~~ 222 (434)
T 2oit_A 172 GSIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQN--------GTVVQYLPT 222 (434)
T ss_dssp SCEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETT--------SCEEEECTT
T ss_pred CeEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCC--------CcEEEEccC
Confidence 457778877663211 1111 11111122 2256777777765 358889987
No 330
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=22.51 E-value=5.4e+02 Score=25.01 Aligned_cols=108 Identities=11% Similarity=0.037 Sum_probs=53.2
Q ss_pred ceEEEEeCCC---C---ceEeCCCCC----CCceeeEEE-EECCEEEEEecccCCCCCCCCccccccCeeEEEECCCCc-
Q 042957 158 ASAEVYHPEL---D---QWTPLPNMS----TLRYKCVGV-TWQGKIHVVSGFAQRADSDGSVHFTERSSAEVYDTQAGK- 225 (371)
Q Consensus 158 ~~~~~yd~~t---~---~W~~~~~~p----~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~- 225 (371)
..++++|..+ + ++.++.... ....-..++ .-+++++++--..... ...+..+|+.+++
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~----------~~~i~~~d~~tg~~ 297 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQN----------YSVMDICDYDESSG 297 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTT----------EEEEEEEEEETTTT
T ss_pred eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCC----------EEEEEEEECCCCcc
Confidence 3688899998 7 666654211 112222222 4588865554332221 2468888988776
Q ss_pred -eeec--ccc----ccCCCC---CCeEE-EECCE-EEEEcCCCCCccCeEEEEeCCCCceEee
Q 042957 226 -WDLV--ARM----WQLDIP---PNQIV-EVDNR-LFSSGDCLKAWKGHIESYDGELNMWDEV 276 (371)
Q Consensus 226 -W~~~--~~~----~~~~~~---~~~~~-~~~~~-iyv~GG~~~~~~~~~~~yd~~~~~W~~~ 276 (371)
|... ..+ ...... ....+ .-+++ |+++.... .....++.||..+..-+.+
T Consensus 298 ~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~-~G~~~l~~~~~~~~~~~~l 359 (740)
T 4a5s_A 298 RWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE-EGYRHICYFQIDKKDCTFI 359 (740)
T ss_dssp EEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT-TSCEEEEEEETTCSSCEES
T ss_pred ccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcC-CCceEEEEEECCCCceEec
Confidence 3222 111 110000 01122 22444 44243221 1235799999988776666
No 331
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=22.27 E-value=2.3e+02 Score=24.53 Aligned_cols=58 Identities=17% Similarity=0.180 Sum_probs=0.0
Q ss_pred EECCEEEEEcCCCCCcc---CeEEEEeC-CCCceEeecCcccccCCCCcccCCCCCCCCCCceeeeeeEeeeCCeEEEEc
Q 042957 244 EVDNRLFSSGDCLKAWK---GHIESYDG-ELNMWDEVNGSCLQTLSSPVSTSSTNTEDWPPIQRLYLTMAPIGTHLYFLA 319 (371)
Q Consensus 244 ~~~~~iyv~GG~~~~~~---~~~~~yd~-~~~~W~~~~~~~~~~l~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~G 319 (371)
..+++.++.|....+.. ..+.-|.- ..++|+.+ +++... .--.-.+.++++| |+|
T Consensus 38 ~~~Gk~~I~GRVE~Rd~se~S~V~fFeet~~d~w~~v-----~~~~~~---------------LqDPF~t~I~gEl-i~G 96 (315)
T 2b4w_A 38 SYKGKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAV-----PELSWE---------------LEDPYIAKINNEM-IFG 96 (315)
T ss_dssp EETTEEEEEEEEECTTCSSCCEEEEEEEEETTEEEEC-----TTCCBS---------------CEEEEEEEETTEE-EEE
T ss_pred eECCEEEEEeeeecCCCccccEEEEEEEcCCCceEEC-----CCCEEE---------------ecCccEEEECCEE-Eee
Q ss_pred cee
Q 042957 320 GYR 322 (371)
Q Consensus 320 G~~ 322 (371)
|..
T Consensus 97 Gve 99 (315)
T 2b4w_A 97 GTR 99 (315)
T ss_dssp EEE
T ss_pred eEE
Done!