BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042958
(1075 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 239/806 (29%), Positives = 344/806 (42%), Gaps = 139/806 (17%)
Query: 2 EEAHALLRWKTSLQNHNNGSLLSSWTLNNVTKTSPCAWVGIHCNRGGRVNSINLTS---- 57
E H L+ +K L + N LL W+ N +PC + G+ C R +V SI+L+S
Sbjct: 12 REIHQLISFKDVLPDKN---LLPDWSSN----KNPCTFDGVTC-RDDKVTSIDLSSKPLN 63
Query: 58 IG-----------------------LKGMLHDFSFSSFPHLAYLDLWHNQLYGNIPP--Q 92
+G + G + F S+ L LDL N L G +
Sbjct: 64 VGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSA--SLTSLDLSRNSLSGPVTTLTS 121
Query: 93 IGNISRLKYLDLSSNL--FFGTIPPEIGHLSYLKTLQLFENQLNGS------IPYEIGRX 144
+G+ S LK+L++SSN F G + + L+ L+ L L N ++G+ + G
Sbjct: 122 LGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGEL 180
Query: 145 XXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNK 204
D+ NL+ L + N+ S IP G+ +L L + NK
Sbjct: 181 KHLAISGNKISGDVDV-----SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNK 234
Query: 205 FSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GN 263
SG ++ T L L + +N IP L+SL LSL NK +G IP L G
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 264 LTNLATLYLYENSLSGSIPSEFG-------------------------NLRSLSMLNLGY 298
L L L N G++P FG +R L +L+L +
Sbjct: 293 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 352
Query: 299 NKLNGIIPHSLGNLT-NLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSL 357
N+ +G +P SL NL+ +L TL + +N+ SG I +
Sbjct: 353 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK------------------- 393
Query: 358 GYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLY 417
+ L LYL +N IP L N L L L +N LSG+IP SLG+L+ L L L+
Sbjct: 394 ---NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 418 DNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEI 477
N L G IP E +++L TL L +N L+G IP L N TNL+ + L +N L+G IP I
Sbjct: 451 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510
Query: 478 GNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSEL----GNLRS--L 531
G L +++ L L+NN SG+IP LG+ +L+ L L N +IP+ + G + + +
Sbjct: 511 GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570
Query: 532 SMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKL 591
+ + Y K G G +L G +L +L+ + G SP
Sbjct: 571 AGKRYVYIKNDGMKKECHGAGNLL--EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628
Query: 592 GSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLS 651
+ + LD+S N LS IPK G++ L LNL +N S IP ++ +L L+ LDLS
Sbjct: 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688
Query: 652 HNFLREAIPSQICIMQXXXXXXXXXXXXVGLIPSCFEKMHGLLRIDISYNELQGPIPNSI 711
N L G IP + L ID+S N L GPIP
Sbjct: 689 SNKLD------------------------GRIPQAMSALTMLTEIDLSNNNLSGPIPEMG 724
Query: 712 AFRDAPIEALQGNKGLCGDVKGLPSC 737
F P N GLCG LP C
Sbjct: 725 QFETFPPAKFLNNPGLCG--YPLPRC 748
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 217 bits (553), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 239/806 (29%), Positives = 344/806 (42%), Gaps = 139/806 (17%)
Query: 2 EEAHALLRWKTSLQNHNNGSLLSSWTLNNVTKTSPCAWVGIHCNRGGRVNSINLTS---- 57
E H L+ +K L + N LL W+ N +PC + G+ C R +V SI+L+S
Sbjct: 9 REIHQLISFKDVLPDKN---LLPDWSSN----KNPCTFDGVTC-RDDKVTSIDLSSKPLN 60
Query: 58 IG-----------------------LKGMLHDFSFSSFPHLAYLDLWHNQLYGNIPP--Q 92
+G + G + F S+ L LDL N L G +
Sbjct: 61 VGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSA--SLTSLDLSRNSLSGPVTTLTS 118
Query: 93 IGNISRLKYLDLSSNL--FFGTIPPEIGHLSYLKTLQLFENQLNGS------IPYEIGRX 144
+G+ S LK+L++SSN F G + + L+ L+ L L N ++G+ + G
Sbjct: 119 LGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGEL 177
Query: 145 XXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNK 204
D+ NL+ L + N+ S IP G+ +L L + NK
Sbjct: 178 KHLAISGNKISGDVDV-----SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNK 231
Query: 205 FSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GN 263
SG ++ T L L + +N IP L+SL LSL NK +G IP L G
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 264 LTNLATLYLYENSLSGSIPSEFG-------------------------NLRSLSMLNLGY 298
L L L N G++P FG +R L +L+L +
Sbjct: 290 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSF 349
Query: 299 NKLNGIIPHSLGNLT-NLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSL 357
N+ +G +P SL NL+ +L TL + +N+ SG I +
Sbjct: 350 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK------------------- 390
Query: 358 GYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLY 417
+ L LYL +N IP L N L L L +N LSG+IP SLG+L+ L L L+
Sbjct: 391 ---NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 447
Query: 418 DNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEI 477
N L G IP E +++L TL L +N L+G IP L N TNL+ + L +N L+G IP I
Sbjct: 448 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 507
Query: 478 GNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSEL----GNLRS--L 531
G L +++ L L+NN SG+IP LG+ +L+ L L N +IP+ + G + + +
Sbjct: 508 GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 567
Query: 532 SMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKL 591
+ + Y K G G +L G +L +L+ + G SP
Sbjct: 568 AGKRYVYIKNDGMKKECHGAGNLL--EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 625
Query: 592 GSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLS 651
+ + LD+S N LS IPK G++ L LNL +N S IP ++ +L L+ LDLS
Sbjct: 626 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 685
Query: 652 HNFLREAIPSQICIMQXXXXXXXXXXXXVGLIPSCFEKMHGLLRIDISYNELQGPIPNSI 711
N L G IP + L ID+S N L GPIP
Sbjct: 686 SNKLD------------------------GRIPQAMSALTMLTEIDLSNNNLSGPIPEMG 721
Query: 712 AFRDAPIEALQGNKGLCGDVKGLPSC 737
F P N GLCG LP C
Sbjct: 722 QFETFPPAKFLNNPGLCG--YPLPRC 745
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 143 bits (360), Expect = 5e-34, Method: Composition-based stats.
Identities = 90/290 (31%), Positives = 150/290 (51%), Gaps = 30/290 (10%)
Query: 809 EIIRATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLP--GEMTFQQEFLNEVK 866
E+ A+++F +++ +G+GG G VYK LA G +VAVK+ GE+ FQ EV+
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ----TEVE 87
Query: 867 ALTEIRHRNIVKFYGFCSHVRHSLAMI--LSNNAAAK----------DLGWTRRMNVIKG 914
++ HRN+++ GFC L + ++N + A L W +R + G
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK-PDSSNWTELAGTY 973
+ L+Y+H+ C P I+HRD+ + N+LLD + EA V DFG+AK + D + GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNL---------NI 1024
G++APE T K +EK DV+ +GV+ LE+I G+ D + L
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 1025 ALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
L+ ++D L +++ +++VA+ C +P RP M +V ++L+
Sbjct: 268 KLEALVDVDL--QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 141 bits (355), Expect = 3e-33, Method: Composition-based stats.
Identities = 89/290 (30%), Positives = 149/290 (51%), Gaps = 30/290 (10%)
Query: 809 EIIRATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLP--GEMTFQQEFLNEVK 866
E+ A+++F +++ +G+GG G VYK LA G +VAVK+ GE+ FQ EV+
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ----TEVE 79
Query: 867 ALTEIRHRNIVKFYGFCSHVRHSLAMI--LSNNAAAK----------DLGWTRRMNVIKG 914
++ HRN+++ GFC L + ++N + A L W +R + G
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK-PDSSNWTELAGTY 973
+ L+Y+H+ C P I+HRD+ + N+LLD + EA V DFG+AK + D + G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNL---------NI 1024
G++APE T K +EK DV+ +GV+ LE+I G+ D + L
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 1025 ALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
L+ ++D L +++ +++VA+ C +P RP M +V ++L+
Sbjct: 260 KLEALVDVDL--QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR 872
ATN+FD + IG G G VYK L G VA+K+ P +EF E++ L+ R
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETLSFCR 93
Query: 873 HRNIVKFYGFCSHVRHSLAMI--------LSNNAAAKDL-----GWTRRMNVIKGISDAL 919
H ++V GFC R+ + +I L + DL W +R+ + G + L
Sbjct: 94 HPHLVSLIGFCDE-RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL----AGTYGY 975
Y+H I+HRD+ S N+LLD + ++DFGI+K K + T L GT GY
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGY 207
Query: 976 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKH------PRDFIXXXXXXXLNLNIA-LDE 1028
+ PE ++TEK DVYSFGV+ EV+ + PR+ + + N L++
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
++DP L I + L + A+ CL + E RP+M V
Sbjct: 268 IVDPNLADK--IRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 135/281 (48%), Gaps = 35/281 (12%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR 872
ATN+FD + IG G G VYK L G VA+K+ P +EF E++ L+ R
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETLSFCR 93
Query: 873 HRNIVKFYGFCSHVRHSLAMI--------LSNNAAAKDL-----GWTRRMNVIKGISDAL 919
H ++V GFC R+ + +I L + DL W +R+ + G + L
Sbjct: 94 HPHLVSLIGFCDE-RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL----AGTYGY 975
Y+H I+HRD+ S N+LLD + ++DFGI+K K T L GT GY
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGY 207
Query: 976 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKH------PRDFIXXXXXXXLNLNIA-LDE 1028
+ PE ++TEK DVYSFGV+ EV+ + PR+ + + N L++
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
++DP L I + L + A+ CL + E RP+M V
Sbjct: 268 IVDPNLADK--IRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (263), Expect = 1e-22, Method: Composition-based stats.
Identities = 87/297 (29%), Positives = 142/297 (47%), Gaps = 40/297 (13%)
Query: 807 YEEIIRATNDFDDE------HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMT---F 857
+ E+ TN+FD+ + +G+GG G VYK + + VAVKK + + ++T
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMV--DITTEEL 73
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSH-----------VRHSLAMILSNNAAAKDLGWT 906
+Q+F E+K + + +H N+V+ GF S SL LS L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK--PDSS 964
R + +G ++ ++++H + +HRDI S N+LLD A +SDFG+A+ + +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFIXXXXX 1017
+ + GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ +
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 1018 XXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
D +D ++ + + S VA CL E RP + KV QLL+
Sbjct: 250 IEDEEKTIED-YIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 105 bits (262), Expect = 2e-22, Method: Composition-based stats.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 40/297 (13%)
Query: 807 YEEIIRATNDFDDE------HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMT---F 857
+ E+ TN+FD+ + +G+GG G VYK + + VAVKK + + ++T
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMV--DITTEEL 67
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSH-----------VRHSLAMILSNNAAAKDLGWT 906
+Q+F E+K + + +H N+V+ GF S SL LS L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN- 965
R + +G ++ ++++H + +HRDI S N+LLD A +SDFG+A+ + +
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 966 -WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFIXXXXX 1017
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ +
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 243
Query: 1018 XXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
D +D ++ + + S VA CL E RP + KV QLL+
Sbjct: 244 IEDEEKTIED-YIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 40/297 (13%)
Query: 807 YEEIIRATNDFDDE------HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMT---F 857
+ E+ TN+FD+ + +G+GG G VYK + + VAVKK + + ++T
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMV--DITTEEL 73
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSH-----------VRHSLAMILSNNAAAKDLGWT 906
+Q+F E+K + + +H N+V+ GF S SL LS L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK--PDSS 964
R + +G ++ ++++H + +HRDI S N+LLD A +SDFG+A+ + +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFIXXXXX 1017
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ +
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 1018 XXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
D +D ++ + + S VA CL E RP + KV QLL+
Sbjct: 250 IEDEEKTIED-YIDKKMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 101 bits (252), Expect = 2e-21, Method: Composition-based stats.
Identities = 86/297 (28%), Positives = 137/297 (46%), Gaps = 40/297 (13%)
Query: 807 YEEIIRATNDFDDE------HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMT---F 857
+ E+ TN+FD+ + G+GG G VYK + + VAVKK + + ++T
Sbjct: 8 FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMV--DITTEEL 64
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-SLAMILSNNAAAKD----------LGWT 906
+Q+F E+K + +H N+V+ GF S L + N + D L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK--PDSS 964
R + +G ++ ++++H + +HRDI S N+LLD A +SDFG+A+ +
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-------KHPRDFIXXXXX 1017
+ + GT Y APE A ++T K D+YSFGV+ LE+I G + P+ +
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 240
Query: 1018 XXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
D + S V+ + VA CL E RP + KV QLL+
Sbjct: 241 IEDEEKTIEDYIDKKXNDADSTSVE----AXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 127/237 (53%), Gaps = 9/237 (3%)
Query: 377 IPSELGNLRSLSMLSLG-YNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSL 435
IPS L NL L+ L +G N L G IP ++ LT L L + ++SG+IP +++L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 436 STLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSI-SNLALNNNKLS 494
TL YN LSG++P S+ +L NL + N +SG+IP G+ + +++ ++ N+L+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 495 GSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGS-----IPHSL 549
G IP + NL NL + L N L G+ ++ + A N L+ + +L
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNL 246
Query: 550 GVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNR 606
LDL +N I G +P L +L FL L ++ N L G++ P+ G+L + + ++N+
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI-PQGGNLQRFDVSAYANNK 302
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 8/219 (3%)
Query: 425 IPSEFGNLRSLSTLSLG-YNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSI 483
IPS NL L+ L +G N L G IP ++ LT L LY+ ++SG+IP + ++++
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 484 SNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSL-SMLSFAYNKLS 542
L + N LSG++P S+ +L NLV + N + +IP G+ L + ++ + N+L+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 543 GSIPHS-----LGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQL 597
G IP + L +DLS N + G+ G K+ LA+N L+ L K+G L
Sbjct: 188 GKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNL 246
Query: 598 EHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIP 636
LDL +NR+ ++P+ L LH LN+S N IP
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 353 IPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLA 412
IPP++ L+ L LY+ ++ +IP L +++L L YN LSG++P S+ +L NL
Sbjct: 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152
Query: 413 TLDLYDNSLSGSIPSEFGNLRSL-STLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG 471
+ N +SG+IP +G+ L +++++ N+L+G IP + NL NL + L N L G
Sbjct: 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEG 211
Query: 472 SIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSL 531
G+ ++ + L N L+ + + +G NL L L NN ++ ++P L L+ L
Sbjct: 212 DASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFL 270
Query: 532 SMLSFAYNKLSGSIPH 547
L+ ++N L G IP
Sbjct: 271 HSLNVSFNNLCGEIPQ 286
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 130/268 (48%), Gaps = 32/268 (11%)
Query: 185 IPSEFGNLRSLSMLSLG-YNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSL 243
IPS NL L+ L +G N G IP ++ LT L LY+ + ++ +IP L +++L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 244 SMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSL-SMLNLGYNKLN 302
L YN LSG++P S+ +L NL + N +SG+IP +G+ L + + + N+L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 303 GIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSN 362
G IP + NL NLA + + N L G G N
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVL------------------------FGSDKN 222
Query: 363 LATLYLYSNSL-FDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSL 421
++L NSL FD ++G ++L+ L L N++ G++P L L L +L++ N+L
Sbjct: 223 TQKIHLAKNSLAFDL--GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280
Query: 422 SGSIPSEFGNLRSLSTLSLGYNK-LSGS 448
G IP + GNL+ + NK L GS
Sbjct: 281 CGEIP-QGGNLQRFDVSAYANNKCLCGS 307
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 29/270 (10%)
Query: 488 LNNNKLSG-------SIPQSLGNLSNLVILYLYN-NSLFDSIPSELGNLRSLSMLSFAYN 539
+NN LSG IP SL NL L LY+ N+L IP + L L L +
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 540 KLSGSIP------HSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGS 593
+SG+IP +L LD S N + G +P + L L+ + N++SG + GS
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 594 LAQL-EHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPI-----KLEELIHLSE 647
++L + +S NRL+ IP +F NL L +++LS N + K + IHL++
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230
Query: 648 LDLSHNFLREAIPSQICIMQXXXXXXXXXXXXVGLIPSCFEKMHGLLRIDISYNELQGPI 707
L+ + ++ + + G +P ++ L +++S+N L G I
Sbjct: 231 NSLAFDL------GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Query: 708 PNSIAFRDAPIEALQGNKGLCGDVKGLPSC 737
P + + A NK LCG LP+C
Sbjct: 285 PQGGNLQRFDVSAYANNKCLCG--SPLPAC 312
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 134/312 (42%), Gaps = 43/312 (13%)
Query: 2 EEAHALLRWKTSLQNHNNGSLLSSWTLNNVTKTSPC--AWVGIHCN---RGGRVNSINLT 56
++ ALL+ K L N + LSSW + T C W+G+ C+ + RVN+++L+
Sbjct: 6 QDKQALLQIKKDLGNP---TTLSSW----LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLS 58
Query: 57 SIGL-KGMLHDFSFSSFPHLAYLDLWH-NQLYGNIPPQIGNISRLKYL------------ 102
+ L K S ++ P+L +L + N L G IPP I +++L YL
Sbjct: 59 GLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 118
Query: 103 ------------DLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRXXX-XXX 149
D S N GT+PP I L L + N+++G+IP G
Sbjct: 119 DFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTS 178
Query: 150 XXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSI 209
IPP+ NL NL + L N L FG+ ++ + L N + +
Sbjct: 179 MTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 210 PHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNL-A 268
+G NL L L NN ++ ++P L L+ L L++ +N L G IP GNL
Sbjct: 238 -GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDV 295
Query: 269 TLYLYENSLSGS 280
+ Y L GS
Sbjct: 296 SAYANNKCLCGS 307
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 25/194 (12%)
Query: 161 IPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLA 220
IPP++ L+ L L++ ++S +IP +++L L YN SG++P S+ +L NL
Sbjct: 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152
Query: 221 TLYLHNNSLFDSIPSELGNLRSL-SMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSG 279
+ N + +IP G+ L + +++ N+L+G IP + NL NLA + L N L G
Sbjct: 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEG 211
Query: 280 SIPSEFGN-----------------------LRSLSMLNLGYNKLNGIIPHSLGNLTNLA 316
FG+ ++L+ L+L N++ G +P L L L
Sbjct: 212 DASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271
Query: 317 TLYIHNNSLSGSIP 330
+L + N+L G IP
Sbjct: 272 SLNVSFNNLCGEIP 285
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 8e-21, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 134/296 (45%), Gaps = 42/296 (14%)
Query: 799 LTFEGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAELASGEIVAVK-----KFHSPLPG 853
L F+G + +++ D + + IG G G+V++AE G VAVK FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAER-- 77
Query: 854 EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-----------VRHSLAMILSNNAAAKD 902
EFL EV + +RH NIV F G + R SL +L + A +
Sbjct: 78 ----VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133
Query: 903 LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962
L RR+++ ++ ++Y+HN PPIVHRD+ S N+L+D V DFG+++
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASX 192
Query: 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNL 1022
AGT ++APE+ EK DVYSFGV+ E+ + P NL
Sbjct: 193 FLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG----------NL 242
Query: 1023 N----IALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
N +A RL P + ++ +I+E C P RP+ + LL+
Sbjct: 243 NPAQVVAAVGFKCKRLEIPRNL-NPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 3e-20, Method: Composition-based stats.
Identities = 87/296 (29%), Positives = 135/296 (45%), Gaps = 42/296 (14%)
Query: 799 LTFEGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAELASGEIVAVK-----KFHSPLPG 853
L F+G + +++ D + + IG G G+V++AE G VAVK FH+
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAER-- 77
Query: 854 EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-----------VRHSLAMILSNNAAAKD 902
EFL EV + +RH NIV F G + R SL +L + A +
Sbjct: 78 ----VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133
Query: 903 LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962
L RR+++ ++ ++Y+HN PPIVHR++ S N+L+D V DFG+++
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192
Query: 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNL 1022
+ AGT ++APE+ EK DVYSFGV+ E+ + P NL
Sbjct: 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG----------NL 242
Query: 1023 N----IALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
N +A RL P + ++ +I+E C P RP+ + LL+
Sbjct: 243 NPAQVVAAVGFKCKRLEIPRNL-NPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp
From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 43/277 (15%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAELASGE-IVAVKKF---HSPLPGEMTFQ-QEFLNEVKA 867
A N+ + E IGKGG G V+K L + +VA+K S EM + QEF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 868 LTEIRHRNIVKFYGF-------------CSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG 914
++ + H NIVK YG C + H L A + W+ ++ ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLD 130
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE-----AHVSDFGIAKFLKPDSSNWTEL 969
I+ + YM N PPIVHRD+ S N+ L +E A V+DFG++ + + + L
Sbjct: 131 IALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGL 186
Query: 970 AGTYGYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALD 1027
G + ++APE A TEK D YSF ++ ++ G+ P D +N+ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM--IRE 244
Query: 1028 EMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
E L P +P C +L +++E+ C +P+ RP
Sbjct: 245 EGLRPTIPE-DC--PPRLRNVIEL---CWSGDPKKRP 275
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 129/277 (46%), Gaps = 43/277 (15%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAELASGE-IVAVKKF---HSPLPGEMTFQ-QEFLNEVKA 867
A N+ + E IGKGG G V+K L + +VA+K S EM + QEF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 868 LTEIRHRNIVKFYGF-------------CSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG 914
++ + H NIVK YG C + H L A + W+ ++ ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLD 130
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE-----AHVSDFGIAKFLKPDSSNWTEL 969
I+ + YM N PPIVHRD+ S N+ L +E A V+DFG + + + + L
Sbjct: 131 IALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVHSVSGL 186
Query: 970 AGTYGYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALD 1027
G + ++APE A TEK D YSF ++ ++ G+ P D +N+ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM--IRE 244
Query: 1028 EMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
E L P +P C +L +++E+ C +P+ RP
Sbjct: 245 EGLRPTIPE-DC--PPRLRNVIEL---CWSGDPKKRP 275
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
Length = 287
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 43/277 (15%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAELASGE-IVAVKKF---HSPLPGEMTFQ-QEFLNEVKA 867
A N+ + E IGKGG G V+K L + +VA+K S EM + QEF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 868 LTEIRHRNIVKFYGF-------------CSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG 914
++ + H NIVK YG C + H L A + W+ ++ ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLD 130
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE-----AHVSDFGIAKFLKPDSSNWTEL 969
I+ + YM N PPIVHRD+ S N+ L +E A V+DF ++ + + + L
Sbjct: 131 IALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVHSVSGL 186
Query: 970 AGTYGYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALD 1027
G + ++APE A TEK D YSF ++ ++ G+ P D +N+ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM--IRE 244
Query: 1028 EMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
E L P +P C +L +++E+ C +P+ RP
Sbjct: 245 EGLRPTIPE-DC--PPRLRNVIEL---CWSGDPKKRP 275
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 45/279 (16%)
Query: 823 IGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+GKG G K +GE++ +K+ + + Q+ FL EVK + + H N++KF G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL---IRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 882 FCSHVRH-----------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ +L I+ + W++R++ K I+ ++Y+H+ I
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNI 129
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFL--------------KPDSSNWTELAGTYGYV 976
+HRD++S N L+ + V+DFG+A+ + KPD + G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 977 APELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPRLP 1035
APE+ EK DV+SFG++ E+I + D++ LN+ LD P P
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCP 249
Query: 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S + + C D +PE RP+ K+ L+
Sbjct: 250 P----------SFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 168/379 (44%), Gaps = 74/379 (19%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+NL ++ +N L+D P NL L + + N+ + P L NLTNL L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287
+ D P L NL +L+ L L N +S +L LT+L L N ++ P N
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LAN 171
Query: 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXX 347
L +L L++ NK++ I L LTNL +L NN +S P
Sbjct: 172 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP----------------- 212
Query: 348 XXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGN 407
LG L+NL L L N L D +G L S
Sbjct: 213 ---------LGILTNLDELSLNGNQLKD-----IGTLAS--------------------- 237
Query: 408 LTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDN 467
LTNL LDL +N +S P L L+ L LG N++S P L LT L L L +N
Sbjct: 238 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN 293
Query: 468 SLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGN 527
L P I NL++++ L L N +S P S +L+ L L+ YNN + D S L N
Sbjct: 294 QLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV--SSLAN 347
Query: 528 LRSLSMLSFAYNKLSGSIP 546
L +++ LS +N++S P
Sbjct: 348 LTNINWLSAGHNQISDLTP 366
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 189/419 (45%), Gaps = 91/419 (21%)
Query: 74 HLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQL 133
+L ++ +NQL P + N+++L + +++N P + +L+ L L LF NQ+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 134 NGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLR 193
D+ P L NL+NL+ L L N++SD S L
Sbjct: 120 ------------------------TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 151
Query: 194 SLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFD-SIPSELGNLRSLSMLSLGYNK 252
SL LS N+ + P L NLT L L + +N + D S+ ++L NL SL + N+
Sbjct: 152 SLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQ 206
Query: 253 LSGSIPHSLGNLTNLATLYLYENSLS--GSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLG 310
+S P LG LTNL L L N L G++ S L +L+ L+L N+++ + P L
Sbjct: 207 ISDITP--LGILTNLDELSLNGNQLKDIGTLAS----LTNLTDLDLANNQISNLAP--LS 258
Query: 311 NLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYS 370
LT L L + N +S P L L+ L L L
Sbjct: 259 GLTKLTELKLGANQISNISP--------------------------LAGLTALTNLELNE 292
Query: 371 NSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFG 430
N L D P + NL++L+ L+L +N +S P S +LT L L Y+N +S S
Sbjct: 293 NQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV--SSLA 346
Query: 431 NLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG---------SIPGEIGNL 480
NL +++ LS G+N++S P L NLT + L L D + + SIP + N+
Sbjct: 347 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 403
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 379 SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTL 438
++L + +L LG + G + L NL ++ +N L+ P NL L +
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDI 90
Query: 439 SLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIP 498
+ N+++ P L NLTNL L L++N ++ P + NL +++ L L++N +S
Sbjct: 91 LMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--I 144
Query: 499 QSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSG-SIPHSLGVLD--LS 555
+L L++L L +N + D P L NL +L L + NK+S S+ L L+ ++
Sbjct: 145 SALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 202
Query: 556 SNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSF 615
+N+ + +I T LG L L +L L NQL L SL L LDL++N++SN P
Sbjct: 203 TNNQISDI-TPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--L 257
Query: 616 GNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660
L KL L L NQ S P L L L+ L+L+ N L + P
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 300
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 168/379 (44%), Gaps = 74/379 (19%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+NL ++ +N L+D P NL L + + N+ + P L NLTNL L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287
+ D P L NL +L+ L L N +S +L LT+L L N ++ P N
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP--LAN 171
Query: 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXX 347
L +L L++ NK++ I L LTNL +L NN +S P
Sbjct: 172 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP----------------- 212
Query: 348 XXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGN 407
LG L+NL L L N L D +G L S
Sbjct: 213 ---------LGILTNLDELSLNGNQLKD-----IGTLAS--------------------- 237
Query: 408 LTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDN 467
LTNL LDL +N +S P L L+ L LG N++S P L LT L L L +N
Sbjct: 238 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN 293
Query: 468 SLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGN 527
L P I NL++++ L L N +S P S +L+ L L+ YNN + D S L N
Sbjct: 294 QLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV--SSLAN 347
Query: 528 LRSLSMLSFAYNKLSGSIP 546
L +++ LS +N++S P
Sbjct: 348 LTNINWLSAGHNQISDLTP 366
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 189/419 (45%), Gaps = 91/419 (21%)
Query: 74 HLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQL 133
+L ++ +NQL P + N+++L + +++N P + +L+ L L LF NQ+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 134 NGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLR 193
D+ P L NL+NL+ L L N++SD S L
Sbjct: 120 ------------------------TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 151
Query: 194 SLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFD-SIPSELGNLRSLSMLSLGYNK 252
SL L+ N+ + P L NLT L L + +N + D S+ ++L NL SL + N+
Sbjct: 152 SLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQ 206
Query: 253 LSGSIPHSLGNLTNLATLYLYENSLS--GSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLG 310
+S P LG LTNL L L N L G++ S L +L+ L+L N+++ + P L
Sbjct: 207 ISDITP--LGILTNLDELSLNGNQLKDIGTLAS----LTNLTDLDLANNQISNLAP--LS 258
Query: 311 NLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYS 370
LT L L + N +S P L L+ L L L
Sbjct: 259 GLTKLTELKLGANQISNISP--------------------------LAGLTALTNLELNE 292
Query: 371 NSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFG 430
N L D P + NL++L+ L+L +N +S P S +LT L L Y+N +S S
Sbjct: 293 NQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV--SSLA 346
Query: 431 NLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG---------SIPGEIGNL 480
NL +++ LS G+N++S P L NLT + L L D + + SIP + N+
Sbjct: 347 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 403
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 379 SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTL 438
++L + +L LG + G + L NL ++ +N L+ P NL L +
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDI 90
Query: 439 SLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIP 498
+ N+++ P L NLTNL L L++N ++ P + NL +++ L L++N +S
Sbjct: 91 LMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--I 144
Query: 499 QSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSG-SIPHSLGVLD--LS 555
+L L++L L +N + D P L NL +L L + NK+S S+ L L+ ++
Sbjct: 145 SALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 202
Query: 556 SNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSF 615
+N+ + +I T LG L L +L L NQL L SL L LDL++N++SN P
Sbjct: 203 TNNQISDI-TPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--L 257
Query: 616 GNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660
L KL L L NQ S P L L L+ L+L+ N L + P
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 300
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 33/260 (12%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V + VAVK G M+ + EF E + + ++ H +VKFYG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE---GSMS-EDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 883 CS--HVRHSLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
CS + + + +SN + K L ++ + + + + ++++ + F +HR
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF---IHR 128
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D++++N L+D D VSDFG+ +++ D + GT + APE+ + K + K
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDD--QYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 991 DVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049
DV++FG+L EV GK P D N + L RL P + D +I
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYT-------NSEVVLKVSQGHRLYRPH-LASD---TIY 235
Query: 1050 EVAISCLDENPESRPTMPKV 1069
++ SC E PE RPT ++
Sbjct: 236 QIMYSCWHELPEKRPTFQQL 255
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 39/270 (14%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIRHRNI 876
IG+G G+VY A ++A+G+ VA++ +M QQ+ +NE+ + E ++ NI
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 877 VKFYGFCSHVRHSLAMILSNNAAAK--DLGWTRRMN------VIKGISDALSYMHNDCFP 928
V + V L +++ A D+ M+ V + AL ++H++
Sbjct: 80 VNYLD-SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
++HRDI S N+LL D ++DFG + P+ S +E+ GT ++APE+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 989 KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
K D++S G++A+E+I+G+ P LN N L TP +KL +I
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP----------YLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 1049 VEVAIS-CLDENPESRPTMPKV--SQLLKI 1075
++ CLD + E R + ++ Q LKI
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 167/367 (45%), Gaps = 52/367 (14%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+NL ++ +N L+D P NL L + + N+ + P L NLTNL L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287
+ D P L NL +L+ L L N +S +L LT+L L N ++ P N
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LAN 171
Query: 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXX 347
L +L L++ NK++ I L LTNL +L NN +S P
Sbjct: 172 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP----------------- 212
Query: 348 XXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGN 407
LG L+NL L L N L D L +L +L+ L L N++S P L
Sbjct: 213 ---------LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSG 259
Query: 408 LTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDN 467
LT L L L N +S P L +L+ L L N+L P + NL NL L LY N
Sbjct: 260 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 315
Query: 468 SLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGN 527
++S P + +L + L +NNK+S SL NL+N+ L +N + D P L N
Sbjct: 316 NISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LAN 369
Query: 528 LRSLSML 534
L ++ L
Sbjct: 370 LTRITQL 376
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 188/419 (44%), Gaps = 91/419 (21%)
Query: 74 HLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQL 133
+L ++ +NQL P + N+++L + +++N P + +L+ L L LF NQ+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 134 NGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLR 193
D+ P L NL+NL+ L L N++SD S L
Sbjct: 120 ------------------------TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 151
Query: 194 SLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFD-SIPSELGNLRSLSMLSLGYNK 252
SL LS N+ + P L NLT L L + +N + D S+ ++L NL SL + N+
Sbjct: 152 SLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQ 206
Query: 253 LSGSIPHSLGNLTNLATLYLYENSLS--GSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLG 310
+S P LG LTNL L L N L G++ S L +L+ L+L N+++ + P L
Sbjct: 207 ISDITP--LGILTNLDELSLNGNQLKDIGTLAS----LTNLTDLDLANNQISNLAP--LS 258
Query: 311 NLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYS 370
LT L L + N +S P L L+ L L L
Sbjct: 259 GLTKLTELKLGANQISNISP--------------------------LAGLTALTNLELNE 292
Query: 371 NSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFG 430
N L D P + NL++L+ L+L +N +S P S +LT L L +N +S S
Sbjct: 293 NQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFSNNKVSDV--SSLA 346
Query: 431 NLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG---------SIPGEIGNL 480
NL +++ LS G+N++S P L NLT + L L D + + SIP + N+
Sbjct: 347 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 403
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 379 SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTL 438
++L + +L LG + G + L NL ++ +N L+ P NL L +
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDI 90
Query: 439 SLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIP 498
+ N+++ P L NLTNL L L++N ++ P + NL +++ L L++N +S
Sbjct: 91 LMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--I 144
Query: 499 QSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSG-SIPHSLGVLD--LS 555
+L L++L L +N + D P L NL +L L + NK+S S+ L L+ ++
Sbjct: 145 SALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 202
Query: 556 SNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSF 615
+N+ + +I T LG L L +L L NQL L SL L LDL++N++SN P
Sbjct: 203 TNNQISDI-TPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--L 257
Query: 616 GNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660
L KL L L NQ S P L L L+ L+L+ N L + P
Sbjct: 258 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 300
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 43/273 (15%)
Query: 817 FDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
FD +G+G GSVYKA +G+IVA+K+ P+ ++ QE + E+ + + +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDL---QEIIKEISIMQQCDSPH 85
Query: 876 IVKFYG-------------FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYM 922
+VK+YG +C S + L N +D T + +KG L Y+
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG----LEYL 141
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H F +HRDI + N+LL+ + A ++DFG+A L + + GT ++APE+
Sbjct: 142 H---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 983 TMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSC--- 1039
+ D++S G+ A+E+ +GK P I + P P P+
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI----------FMIPTNPPPTFRKP 248
Query: 1040 -IVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ D V+ CL ++PE R T ++ Q
Sbjct: 249 ELWSDNFTDFVK---QCLVKSPEQRATATQLLQ 278
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.7 bits (208), Expect = 3e-16, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS TEL GT Y+ PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEG 180
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T+L GT Y+ PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 83.6 bits (205), Expect = 6e-16, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T+L GT Y+ PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 83.6 bits (205), Expect = 6e-16, Method: Composition-based stats.
Identities = 80/278 (28%), Positives = 135/278 (48%), Gaps = 45/278 (16%)
Query: 820 EHCIGKGGQGSVYKAEL-ASGE---IVAVKKFHSPLPGEMTFQQ--EFLNEVKALTEIRH 873
E IG G G V + L A G+ VA+K L G T +Q EFL+E + + H
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKT----LKGGYTERQRREFLSEASIMGQFEH 76
Query: 874 RNIVKFYGFCSHVRHSL-AMILSNNAAAKDLGWTRRMN-----------VIKGISDALSY 921
NI++ G V +S+ MIL+ L R+N +++GI+ + Y
Sbjct: 77 PNIIRLEGV---VTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRY 133
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YV 976
+ + VHRD++++N+L++ + VSDFG+++FL+ +SS+ TE + G +
Sbjct: 134 LAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 977 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLP 1035
APE K T D +S+G++ EV+ G+ P + +N A+++ D RLP
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQDVIN---AIEQ--DYRLP 243
Query: 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P D S+ ++ + C ++ +RP P+V L
Sbjct: 244 PPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis Of
A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 83.6 bits (205), Expect = 6e-16, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T+L GT Y+ PE+
Sbjct: 127 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T+L GT Y+ PE+
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 185
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 169/379 (44%), Gaps = 75/379 (19%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+NL ++ +N L+D P NL L + + N+ + P L NLTNL L L NN
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287
+ D P L NL +L+ L L N +S +L LT+L L + N ++ P N
Sbjct: 123 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLS-FGNQVTDLKP--LAN 175
Query: 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXX 347
L +L L++ NK++ I L LTNL +L NN +S P
Sbjct: 176 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP----------------- 216
Query: 348 XXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGN 407
LG L+NL L L N L D +G L S
Sbjct: 217 ---------LGILTNLDELSLNGNQLKD-----IGTLAS--------------------- 241
Query: 408 LTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDN 467
LTNL LDL +N +S P L L+ L LG N++S P L LT L L L +N
Sbjct: 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN 297
Query: 468 SLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGN 527
L P I NL++++ L L N +S P S +L+ L L+ YNN + D S L N
Sbjct: 298 QLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV--SSLAN 351
Query: 528 LRSLSMLSFAYNKLSGSIP 546
L +++ LS +N++S P
Sbjct: 352 LTNINWLSAGHNQISDLTP 370
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 190/419 (45%), Gaps = 92/419 (21%)
Query: 74 HLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQL 133
+L ++ +NQL P + N+++L + +++N P + +L+ L L LF NQ+
Sbjct: 69 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 124
Query: 134 NGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLR 193
D+ P L NL+NL+ L L N++SD S L
Sbjct: 125 ------------------------TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 156
Query: 194 SLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFD-SIPSELGNLRSLSMLSLGYNK 252
SL LS G N+ + P L NLT L L + +N + D S+ ++L NL SL + N+
Sbjct: 157 SLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQ 210
Query: 253 LSGSIPHSLGNLTNLATLYLYENSLS--GSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLG 310
+S P LG LTNL L L N L G++ S L +L+ L+L N+++ + P L
Sbjct: 211 ISDITP--LGILTNLDELSLNGNQLKDIGTLAS----LTNLTDLDLANNQISNLAP--LS 262
Query: 311 NLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYS 370
LT L L + N +S P L L+ L L L
Sbjct: 263 GLTKLTELKLGANQISNISP--------------------------LAGLTALTNLELNE 296
Query: 371 NSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFG 430
N L D P + NL++L+ L+L +N +S P S +LT L L Y+N +S S
Sbjct: 297 NQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV--SSLA 350
Query: 431 NLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG---------SIPGEIGNL 480
NL +++ LS G+N++S P L NLT + L L D + + SIP + N+
Sbjct: 351 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 407
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 26/285 (9%)
Query: 379 SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTL 438
++L + +L LG + G + L NL ++ +N L+ P NL L +
Sbjct: 43 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDI 95
Query: 439 SLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIP 498
+ N+++ P L NLTNL L L++N ++ P + NL +++ L L++N +S
Sbjct: 96 LMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-- 149
Query: 499 QSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSG-SIPHSLGVLD--LS 555
+L L++L L + N + D P L NL +L L + NK+S S+ L L+ ++
Sbjct: 150 SALSGLTSLQQLS-FGNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 206
Query: 556 SNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSF 615
+N+ + +I T LG L L +L L NQL L SL L LDL++N++SN P
Sbjct: 207 TNNQISDI-TPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--L 261
Query: 616 GNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660
L KL L L NQ S P L L L+ L+L+ N L + P
Sbjct: 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 39/270 (14%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIRHRNI 876
IG+G G+VY A ++A+G+ VA++ +M QQ+ +NE+ + E ++ NI
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 877 VKFYGFCSHVRHSLAMILSNNAAAK--DLGWTRRMN------VIKGISDALSYMHNDCFP 928
V + V L +++ A D+ M+ V + AL ++H++
Sbjct: 80 VNYLD-SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
++HRDI S N+LL D ++DFG + P+ S + + GT ++APE+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 989 KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
K D++S G++A+E+I+G+ P LN N L TP +KL +I
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP----------YLNENPLRALYLIATNGTPELQNPEKLSAI 245
Query: 1049 VEVAIS-CLDENPESRPTMPKV--SQLLKI 1075
++ CLD + E R + ++ Q LKI
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 169/379 (44%), Gaps = 75/379 (19%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+NL ++ +N L+D P NL L + + N+ + P L NLTNL L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287
+ D P L NL +L+ L L N +S +L LT+L L + N ++ P N
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLN-FGNQVTDLKP--LAN 170
Query: 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXX 347
L +L L++ NK++ I L LTNL +L NN +S P
Sbjct: 171 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP----------------- 211
Query: 348 XXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGN 407
LG L+NL L L N L D +G L S
Sbjct: 212 ---------LGILTNLDELSLNGNQLKD-----IGTLAS--------------------- 236
Query: 408 LTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDN 467
LTNL LDL +N +S P L L+ L LG N++S P L LT L L L +N
Sbjct: 237 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNEN 292
Query: 468 SLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGN 527
L P I NL++++ L L N +S P S +L+ L L+ YNN + D S L N
Sbjct: 293 QLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV--SSLAN 346
Query: 528 LRSLSMLSFAYNKLSGSIP 546
L +++ LS +N++S P
Sbjct: 347 LTNINWLSAGHNQISDLTP 365
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 190/419 (45%), Gaps = 92/419 (21%)
Query: 74 HLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQL 133
+L ++ +NQL P + N+++L + +++N P + +L+ L L LF NQ+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 134 NGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLR 193
D+ P L NL+NL+ L L N++SD S L
Sbjct: 120 ------------------------TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 151
Query: 194 SLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFD-SIPSELGNLRSLSMLSLGYNK 252
SL L+ G N+ + P L NLT L L + +N + D S+ ++L NL SL + N+
Sbjct: 152 SLQQLNFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQ 205
Query: 253 LSGSIPHSLGNLTNLATLYLYENSLS--GSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLG 310
+S P LG LTNL L L N L G++ S L +L+ L+L N+++ + P L
Sbjct: 206 ISDITP--LGILTNLDELSLNGNQLKDIGTLAS----LTNLTDLDLANNQISNLAP--LS 257
Query: 311 NLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYS 370
LT L L + N +S P L L+ L L L
Sbjct: 258 GLTKLTELKLGANQISNISP--------------------------LAGLTALTNLELNE 291
Query: 371 NSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFG 430
N L D P + NL++L+ L+L +N +S P S +LT L L Y+N +S S
Sbjct: 292 NQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKVSDV--SSLA 345
Query: 431 NLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG---------SIPGEIGNL 480
NL +++ LS G+N++S P L NLT + L L D + + SIP + N+
Sbjct: 346 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 402
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 30/287 (10%)
Query: 379 SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTL 438
++L + +L LG + G + L NL ++ +N L+ P NL L +
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDI 90
Query: 439 SLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIP 498
+ N+++ P L NLTNL L L++N ++ P + NL +++ L L++N +S
Sbjct: 91 LMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS---- 142
Query: 499 QSLGNLSNLVILYLYN--NSLFDSIPSELGNLRSLSMLSFAYNKLSG-SIPHSLGVLD-- 553
+ LS L L N N + D P L NL +L L + NK+S S+ L L+
Sbjct: 143 -DISALSGLTSLQQLNFGNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESL 199
Query: 554 LSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPK 613
+++N+ + +I T LG L L +L L NQL L SL L LDL++N++SN P
Sbjct: 200 IATNNQISDI-TPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 255
Query: 614 SFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660
L KL L L NQ S P L L L+ L+L+ N L + P
Sbjct: 256 -LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 299
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.8 bits (203), Expect = 9e-16, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 872 RHRNIVKFYGFCSHVRHSLAMILS---NNAAAKDL------GWTRRMNVIKGISDALSYM 922
RH NI++ YG+ H + +IL K+L R I +++ALSY
Sbjct: 71 RHPNILRLYGY-FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 184
Query: 983 TMKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.8 bits (203), Expect = 9e-16, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 27/265 (10%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
E IG GG G VY+A E+ H P + E K ++H NI+
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 880 YGFC-SHVRHSLAMILSNNAAAKDLGWTRRM------NVIKGISDALSYMHNDCFPPIVH 932
G C L M + + +R+ N I+ ++Y+H++ PI+H
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIH 131
Query: 933 RDISSKNVLL-------DFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
RD+ S N+L+ D N+ ++DFG+A+ + + AG Y ++APE+
Sbjct: 132 RDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMAPEVIRAS 189
Query: 985 KVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
++ DV+S+GVL E++ G+ P I + +A++++ LP PS +
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGEVPFRGI---DGLAVAYGVAMNKL---ALPIPSTCPE-- 241
Query: 1045 LISIVEVAISCLDENPESRPTMPKV 1069
++ C + +P SRP+ +
Sbjct: 242 --PFAKLMEDCWNPDPHSRPSFTNI 264
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEG 180
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
Length = 267
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 125 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 179
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By A
Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine Aurora
Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 130 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 180
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 143 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 26/200 (13%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIRHRNI 876
IG+G G+VY A ++A+G+ VA++ +M QQ+ +NE+ + E ++ NI
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 877 VKFYGFCSHVRHSLAMILSNNAAAK--DLGWTRRMN------VIKGISDALSYMHNDCFP 928
V + V L +++ A D+ M+ V + AL ++H++
Sbjct: 81 VNYLD-SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 136
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
++HRDI S N+LL D ++DFG + P+ S + + GT ++APE+
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 989 KCDVYSFGVLALEVIKGKHP 1008
K D++S G++A+E+I+G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + SS T L+GT Y+ PE+
Sbjct: 127 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 26/200 (13%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIRHRNI 876
IG+G G+VY A ++A+G+ VA++ +M QQ+ +NE+ + E ++ NI
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 877 VKFYGFCSHVRHSLAMILSNNAAAK--DLGWTRRMN------VIKGISDALSYMHNDCFP 928
V + V L +++ A D+ M+ V + AL ++H++
Sbjct: 80 VNYLD-SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
++HRDI S N+LL D ++DFG + P+ S + + GT ++APE+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 989 KCDVYSFGVLALEVIKGKHP 1008
K D++S G++A+E+I+G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With [7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
DFD +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 875 NIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDC 926
NI++ YG+ L + R I +++ALSY H+
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK- 131
Query: 927 FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 986
++HRDI +N+LL + E ++DFG + + SS T L GT Y+ PE+
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 987 TEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + G P
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 152 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE
Sbjct: 131 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 45/278 (16%)
Query: 820 EHCIGKGGQGSVYKAEL-ASGE---IVAVKKFHSPLPGEMTFQQ--EFLNEVKALTEIRH 873
E IG G G V + L A G+ VA+K L G T +Q EFL+E + + H
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKT----LKGGYTERQRREFLSEASIMGQFEH 74
Query: 874 RNIVKFYGFCSHVRHSL-AMILSNNAAAKDLGWTRRMN-----------VIKGISDALSY 921
NI++ G V +S+ MIL+ L R+N +++GI+ + Y
Sbjct: 75 PNIIRLEGV---VTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRY 131
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YV 976
+ + VHRD++++N+L++ + VSDFG+++FL+ +SS+ T + G +
Sbjct: 132 LAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 977 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLP 1035
APE K T D +S+G++ EV+ G+ P + +N A+++ D RLP
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQDVIN---AIEQ--DYRLP 241
Query: 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P D S+ ++ + C ++ +RP P+V L
Sbjct: 242 PPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 168/367 (45%), Gaps = 53/367 (14%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+NL ++ +N L+D P NL L + + N+ + P L NLTNL L L NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287
+ D P L NL +L+ L L N +S +L LT+L L + N ++ P N
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLN-FGNQVTDLKP--LAN 170
Query: 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXX 347
L +L L++ NK++ I L LTNL +L NN +S P
Sbjct: 171 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP----------------- 211
Query: 348 XXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGN 407
LG L+NL L L N L D L +L +L+ L L N++S P L
Sbjct: 212 ---------LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSG 258
Query: 408 LTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDN 467
LT L L L N +S P L +L+ L L N+L P + NL NL L LY N
Sbjct: 259 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 314
Query: 468 SLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGN 527
++S P + +L + L +NNK+S SL NL+N+ L +N + D P L N
Sbjct: 315 NISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LAN 368
Query: 528 LRSLSML 534
L ++ L
Sbjct: 369 LTRITQL 375
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 189/419 (45%), Gaps = 92/419 (21%)
Query: 74 HLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQL 133
+L ++ +NQL P + N+++L + +++N P + +L+ L L LF NQ+
Sbjct: 64 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 134 NGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLR 193
D+ P L NL+NL+ L L N++SD S L
Sbjct: 120 ------------------------TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 151
Query: 194 SLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFD-SIPSELGNLRSLSMLSLGYNK 252
SL L+ G N+ + P L NLT L L + +N + D S+ ++L NL SL + N+
Sbjct: 152 SLQQLNFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQ 205
Query: 253 LSGSIPHSLGNLTNLATLYLYENSLS--GSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLG 310
+S P LG LTNL L L N L G++ S L +L+ L+L N+++ + P L
Sbjct: 206 ISDITP--LGILTNLDELSLNGNQLKDIGTLAS----LTNLTDLDLANNQISNLAP--LS 257
Query: 311 NLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYS 370
LT L L + N +S P L L+ L L L
Sbjct: 258 GLTKLTELKLGANQISNISP--------------------------LAGLTALTNLELNE 291
Query: 371 NSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFG 430
N L D P + NL++L+ L+L +N +S P S +LT L L +N +S S
Sbjct: 292 NQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFSNNKVSDV--SSLA 345
Query: 431 NLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG---------SIPGEIGNL 480
NL +++ LS G+N++S P L NLT + L L D + + SIP + N+
Sbjct: 346 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 402
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 30/287 (10%)
Query: 379 SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTL 438
++L + +L LG + G + L NL ++ +N L+ P NL L +
Sbjct: 38 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDI 90
Query: 439 SLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIP 498
+ N+++ P L NLTNL L L++N ++ P + NL +++ L L++N +S
Sbjct: 91 LMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS---- 142
Query: 499 QSLGNLSNLVILYLYN--NSLFDSIPSELGNLRSLSMLSFAYNKLSG-SIPHSLGVLD-- 553
+ LS L L N N + D P L NL +L L + NK+S S+ L L+
Sbjct: 143 -DISALSGLTSLQQLNFGNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESL 199
Query: 554 LSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPK 613
+++N+ + +I T LG L L +L L NQL L SL L LDL++N++SN P
Sbjct: 200 IATNNQISDI-TPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 255
Query: 614 SFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660
L KL L L NQ S P L L L+ L+L+ N L + P
Sbjct: 256 -LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 299
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E I+A+K + + + EV+ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS T L GT Y+ PE+
Sbjct: 123 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 177
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 183
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS +L GT Y+ PE+
Sbjct: 152 SKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 872 RHRNIVKFYGFCSHVRHSLAMILS---NNAAAKDL------GWTRRMNVIKGISDALSYM 922
RH NI++ YG+ H + +IL K+L R I +++ALSY
Sbjct: 71 RHPNILRLYGYF-HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIE 184
Query: 983 TMKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 33/264 (12%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 76
Query: 883 CSHVRHSLAMILSN----------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ + LA++ +A+ + +++ + + + Y+H I+H
Sbjct: 77 ST--KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIH 131
Query: 933 RDISSKNVLLDFDNEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMK---VT 987
RD+ S N+ L DN + DFG+A K S + +L+G+ ++APE+ +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 988 EKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP--SCIVQDKL 1045
+ DVY+FG++ E++ G+ P +N + EM+ +P S + +
Sbjct: 192 FQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 243
Query: 1046 ISIVEVAISCLDENPESRPTMPKV 1069
+ + CL + + RP+ P++
Sbjct: 244 KRMKRLMAECLKKKRDERPSFPRI 267
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 42/280 (15%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+D++ + IG G V A A E VA+K+ + L T E L E++A+++ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHH 67
Query: 874 RNIVKFY-GFCSHVRHSLAMILSNNAAAKD---------------LGWTRRMNVIKGISD 917
NIV +Y F L M L + + D L + +++ + +
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-----SSNWTELAGT 972
L Y+H + +HRD+ + N+LL D ++DFG++ FL + GT
Sbjct: 128 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 973 YGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++APE+ ++ + K D++SFG+ A+E+ G P L L D
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------D 238
Query: 1032 PRLPTPSCIVQDKLI------SIVEVAISCLDENPESRPT 1065
P P+ VQDK + S ++ CL ++PE RPT
Sbjct: 239 P--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 42/280 (15%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+D++ + IG G V A A E VA+K+ + L T E L E++A+++ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHH 72
Query: 874 RNIVKFY-GFCSHVRHSLAMILSNNAAAKD---------------LGWTRRMNVIKGISD 917
NIV +Y F L M L + + D L + +++ + +
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-----SSNWTELAGT 972
L Y+H + +HRD+ + N+LL D ++DFG++ FL + GT
Sbjct: 133 GLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 973 YGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++APE+ ++ + K D++SFG+ A+E+ G P L L D
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------D 243
Query: 1032 PRLPTPSCIVQDKLI------SIVEVAISCLDENPESRPT 1065
P P+ VQDK + S ++ CL ++PE RPT
Sbjct: 244 P--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 126 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 180
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG 183
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 128 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 167/367 (45%), Gaps = 53/367 (14%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+NL ++ +N L+D P NL L + + N+ + P L NLTNL L L NN
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 121
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287
+ D P L NL +L+ L L N +S +L LT+L L + N ++ P N
Sbjct: 122 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLS-FGNQVTDLKP--LAN 174
Query: 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXX 347
L +L L++ NK++ I L LTNL +L NN +S P
Sbjct: 175 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP----------------- 215
Query: 348 XXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGN 407
LG L+NL L L N L D L +L +L+ L L N++S P L
Sbjct: 216 ---------LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSG 262
Query: 408 LTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDN 467
LT L L L N +S P L +L+ L L N+L P + NL NL L LY N
Sbjct: 263 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 318
Query: 468 SLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGN 527
++S P + +L + L NNK+S SL NL+N+ L +N + D P L N
Sbjct: 319 NISDISP--VSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LAN 372
Query: 528 LRSLSML 534
L ++ L
Sbjct: 373 LTRITQL 379
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 189/419 (45%), Gaps = 92/419 (21%)
Query: 74 HLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQL 133
+L ++ +NQL P + N+++L + +++N P + +L+ L L LF NQ+
Sbjct: 68 NLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 123
Query: 134 NGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLR 193
D+ P L NL+NL+ L L N++SD S L
Sbjct: 124 ------------------------TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLT 155
Query: 194 SLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFD-SIPSELGNLRSLSMLSLGYNK 252
SL LS G N+ + P L NLT L L + +N + D S+ ++L NL SL + N+
Sbjct: 156 SLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQ 209
Query: 253 LSGSIPHSLGNLTNLATLYLYENSLS--GSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLG 310
+S P LG LTNL L L N L G++ S L +L+ L+L N+++ + P L
Sbjct: 210 ISDITP--LGILTNLDELSLNGNQLKDIGTLAS----LTNLTDLDLANNQISNLAP--LS 261
Query: 311 NLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYS 370
LT L L + N +S P L L+ L L L
Sbjct: 262 GLTKLTELKLGANQISNISP--------------------------LAGLTALTNLELNE 295
Query: 371 NSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFG 430
N L D P + NL++L+ L+L +N +S P S +LT L L +N +S S
Sbjct: 296 NQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFANNKVSDV--SSLA 349
Query: 431 NLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG---------SIPGEIGNL 480
NL +++ LS G+N++S P L NLT + L L D + + SIP + N+
Sbjct: 350 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNV 406
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 26/285 (9%)
Query: 379 SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTL 438
++L + +L LG + G + L NL ++ +N L+ P NL L +
Sbjct: 42 TDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDI 94
Query: 439 SLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIP 498
+ N+++ P L NLTNL L L++N ++ P + NL +++ L L++N +S
Sbjct: 95 LMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--I 148
Query: 499 QSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSG-SIPHSLGVLD--LS 555
+L L++L L + N + D P L NL +L L + NK+S S+ L L+ ++
Sbjct: 149 SALSGLTSLQQLS-FGNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIA 205
Query: 556 SNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSF 615
+N+ + +I T LG L L +L L NQL L SL L LDL++N++SN P
Sbjct: 206 TNNQISDI-TPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--L 260
Query: 616 GNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660
L KL L L NQ S P L L L+ L+L+ N L + P
Sbjct: 261 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 303
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor
Length = 272
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E +++FG + + SS T L GT Y+ PE+
Sbjct: 129 SK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
Length = 268
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAA---------KDLGWTRRMNVIKGISDALSYM 922
RH NI++ YG+ H + +IL R I +++ALSY
Sbjct: 66 RHPNILRLYGYF-HDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 125 HSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIE 179
Query: 983 TMKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E +++FG + + SS T L GT Y+ PE+
Sbjct: 128 SK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
A DF+ +GKG G+VY A E S I+A+K + + + EV+ + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 872 RHRNIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
RH NI++ YG+ L + R I +++ALSY H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ ++HRDI +N+LL E ++DFG + + SS L GT Y+ PE+
Sbjct: 127 SK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + GK P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 80.1 bits (196), Expect = 7e-15, Method: Composition-based stats.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 883 CSHVRHSL--------AMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + ++ ++ +A+ + +++ + + + Y+H I+HRD
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRD 145
Query: 935 ISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPE---LAYTMK 985
+ S N+ L DN + DFG+A + S W+ +L+G+ ++APE + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP--SCIVQD 1043
+ + DVY+FG++ E++ G+ P +N + EM+ +P S + +
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 1044 KLISIVEVAISCLDENPESRPTMPKV 1069
+ + CL + + RP+ P++
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRI 279
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 41/268 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 88
Query: 883 CSHVRHSLAMILS----------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ + LA++ +A+ + +++ + + + Y+H I+H
Sbjct: 89 ST--KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIH 143
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPE---LAYT 983
RD+ S N+ L DN + DFG+A + S W+ +L+G+ ++APE + +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP--SCIV 1041
+ + DVY+FG++ E++ G+ P +N + EM+ +P S +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLP--------YSNINNRDQIIEMVGRGSLSPDLSKVR 251
Query: 1042 QDKLISIVEVAISCLDENPESRPTMPKV 1069
+ + + CL + + RP+ P++
Sbjct: 252 SNCPKRMKRLMAECLKKKRDERPSFPRI 279
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 44/272 (16%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
E +G+G G V KA+ + + VA+K+ S + ++ F+ E++ L+ + H NIVK
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKD-VAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKL 67
Query: 880 YGFC----------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
YG C +V H A L AA + W + S ++Y+H
Sbjct: 68 YGACLNPVCLVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCLQ------CSQGVAYLH 120
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
+ ++HRD+ N+LL + DFG A ++ ++ T G+ ++APE+
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSAAWMAPEVFE 177
Query: 983 TMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXL-NLNIALDEMLDPRLPTPSCIV 1041
+EKCDV+S+G++ EVI + P D I + ++ L LP P
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP---- 233
Query: 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
I + C ++P RP+M ++ +++
Sbjct: 234 ------IESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 44/272 (16%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
E +G+G G V KA+ + + VA+K+ S + ++ F+ E++ L+ + H NIVK
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKD-VAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKL 66
Query: 880 YGFC----------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
YG C +V H A L AA + W + S ++Y+H
Sbjct: 67 YGACLNPVCLVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCLQ------CSQGVAYLH 119
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
+ ++HRD+ N+LL + DFG A ++ ++ T G+ ++APE+
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSAAWMAPEVFE 176
Query: 983 TMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXL-NLNIALDEMLDPRLPTPSCIV 1041
+EKCDV+S+G++ EVI + P D I + ++ L LP P
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP---- 232
Query: 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
I + C ++P RP+M ++ +++
Sbjct: 233 ------IESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.7 bits (195), Expect = 9e-15, Method: Composition-based stats.
Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 26/200 (13%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQE-----FLNEVKALTEIRHRNI 876
IG+G G+VY A ++A+G+ VA++ +M QQ+ +NE+ + E ++ NI
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIR--------QMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 877 VKFYGFCSHVRHSLAMILSNNAAAK--DLGWTRRMN------VIKGISDALSYMHNDCFP 928
V + V L +++ A D+ M+ V + AL ++H++
Sbjct: 81 VNYLD-SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--- 136
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
++HR+I S N+LL D ++DFG + P+ S + + GT ++APE+
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 989 KCDVYSFGVLALEVIKGKHP 1008
K D++S G++A+E+I+G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
DFD +GKG G+VY A E S I+A+K + + + EV+ + +RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 875 NIVKFYGFCSHVRH--------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDC 926
NI++ YG+ L + R I +++ALSY H+
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK- 131
Query: 927 FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 986
++HRDI +N+LL + E ++DFG + + SS L GT Y+ PE+
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMH 187
Query: 987 TEKCDVYSFGVLALEVIKGKHP 1008
EK D++S GVL E + G P
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 799 LTFEGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTF 857
L F+G Y++ D +H +G G G VY+ + VAVK E T
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTM 64
Query: 858 Q-QEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN------ 910
+ +EFL E + EI+H N+V+ G C+ +I L + R N
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNA 123
Query: 911 -----VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965
+ IS A+ Y+ F +HRD++++N L+ ++ V+DFG+++ + D+
Sbjct: 124 VVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-- 178
Query: 966 WTELAGT---YGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXL 1020
+T AG + APE LAY K + K DV++FGVL E+ G P I L
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 237
Query: 1021 NLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
L++ D R+ P + + E+ +C NP RP+ ++ Q
Sbjct: 238 -----LEK--DYRMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 277
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQE---FLNEVKALTEIRHRNIVK 878
IG+G G V A + +SG++VAVKK ++ QQ NEV + + +H N+V+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 879 FY-GFCSHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIV 931
Y + + M A D+ RMN V + ALS +H ++
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 269
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
HRDI S ++LL D +SDFG + + L GT ++APEL + + D
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G++ +E++ G+ P
Sbjct: 330 IWSLGIMVIEMVDGEPP 346
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex
With A Consensus Peptide
Length = 301
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQE---FLNEVKALTEIRHRNIVK 878
IG+G G V A + +SG++VAVKK ++ QQ NEV + + +H N+V+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 879 FY-GFCSHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIV 931
Y + + M A D+ RMN V + ALS +H ++
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 147
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
HRDI S ++LL D +SDFG + + L GT ++APEL + + D
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G++ +E++ G+ P
Sbjct: 208 IWSLGIMVIEMVDGEPP 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 76.3 bits (186), Expect = 9e-14, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQE---FLNEVKALTEIRHRNIVK 878
IG+G G V A + +SG++VAVKK ++ QQ NEV + + +H N+V+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 879 FY-GFCSHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIV 931
Y + + M A D+ RMN V + ALS +H ++
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 138
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
HRDI S ++LL D +SDFG + + L GT ++APEL + + D
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G++ +E++ G+ P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.3 bits (186), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQE---FLNEVKALTEIRHRNIVK 878
IG+G G V A + +SG++VAVKK ++ QQ NEV + + +H N+V+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 879 FY-GFCSHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIV 931
Y + + M A D+ RMN V + ALS +H ++
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 149
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
HRDI S ++LL D +SDFG + + L GT ++APEL + + D
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G++ +E++ G+ P
Sbjct: 210 IWSLGIMVIEMVDGEPP 226
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQE---FLNEVKALTEIRHRNIVK 878
IG+G G V A + +SG++VAVKK ++ QQ NEV + + +H N+V+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 879 FY-GFCSHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIV 931
Y + + M A D+ RMN V + ALS +H ++
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 192
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
HRDI S ++LL D +SDFG + + L GT ++APEL + + D
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G++ +E++ G+ P
Sbjct: 253 IWSLGIMVIEMVDGEPP 269
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQE---FLNEVKALTEIRHRNIVK 878
IG+G G V A + +SG++VAVKK ++ QQ NEV + + +H N+V+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 879 FY-GFCSHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIV 931
Y + + M A D+ RMN V + ALS +H ++
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 142
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
HRDI S ++LL D +SDFG + + L GT ++APEL + + D
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G++ +E++ G+ P
Sbjct: 203 IWSLGIMVIEMVDGEPP 219
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I+ L + R N + IS A+ Y+
Sbjct: 74 PNLVQLLGVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 239
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 240 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I+ L + R N + IS A+ Y+
Sbjct: 69 PNLVQLLGVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 234
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 235 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I+ L + R N + IS A+ Y+
Sbjct: 69 PNLVQLLGVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 234
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 235 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQE---FLNEVKALTEIRHRNIVK 878
IG+G G V A E +G+ VAVKK ++ QQ NEV + + H N+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM------DLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 879 FYG-FCSHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIV 931
Y + + M A D+ RMN V + ALSY+HN ++
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVI 163
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
HRDI S ++LL D +SDFG + + L GT ++APE+ + + D
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G++ +E+I G+ P
Sbjct: 224 IWSLGIMVIEMIDGEPP 240
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VA+K PG M+ + FL E + + +++H +V+ Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTMS-PESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 883 CS---------HVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
S ++ + + + L +++ ++ ++Y+ + +HR
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY---IHR 129
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCDV 992
D+ S N+L+ ++DFG+A+ ++ + + A + APE A + T K DV
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 993 YSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEM-LDPRLPTPSCIVQDKLISIVE 1050
+SFG+L E++ KG+ P +N L+++ R+P P QD IS+ E
Sbjct: 190 WSFGILLTELVTKGRVP--------YPGMNNREVLEQVERGYRMPCP----QDCPISLHE 237
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ I C ++PE RPT + L+
Sbjct: 238 LMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 883 CSHVRHSLAMILSNNAA--------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + ++ ++ + +++ + + + Y+H I+HRD
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 129
Query: 935 ISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAYTMKVTE 988
+ S N+ L D + DFG+A + S W+ +L+G+ ++APE+ +++ +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 182
Query: 989 K------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQ 1042
K DVY+FG++ E++ G+ P I + L P L S +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY---LSPDL---SKVRS 236
Query: 1043 DKLISIVEVAISCLDENPESRPTMPKV 1069
+ ++ + CL + + RP P++
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQI 263
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 807 YEEIIRATNDFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNE 864
Y++ D +H +G G G VY+ + VAVK E T + +EFL E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 263
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIK 913
+ EI+H N+V+ G C+ +I L + R N +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY 973
IS A+ Y+ F +HR+++++N L+ ++ V+DFG+++ + D+ +T AG
Sbjct: 323 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 377
Query: 974 ---GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDE 1028
+ APE LAY K + K DV++FGVL E+ G P I L L++
Sbjct: 378 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 431
Query: 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
D R+ P + + E+ +C NP RP+ ++ Q +
Sbjct: 432 --DYRMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 31/263 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 883 CSHVRHSLAMILSNNAA--------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + ++ ++ + +++ + + + Y+H I+HRD
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 935 ISSKNVLLDFDNEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK--- 989
+ S N+ L D + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPY 191
Query: 990 ---CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
DVY+FG++ E++ G+ P I + L P L S + +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY---LSPDL---SKVRSNCPK 245
Query: 1047 SIVEVAISCLDENPESRPTMPKV 1069
++ + CL + + RP P++
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQI 268
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 39/285 (13%)
Query: 807 YEEIIRATNDFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEV 865
Y++ D +H +G G G VY+ + VAVK L + +EFL E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEA 306
Query: 866 KALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKG 914
+ EI+H N+V+ G C+ +I L + R N +
Sbjct: 307 AVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 365
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY- 973
IS A+ Y+ F +HR+++++N L+ ++ V+DFG+++ + D+ +T AG
Sbjct: 366 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 420
Query: 974 --GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEM 1029
+ APE LAY K + K DV++FGVL E+ G P I L L++
Sbjct: 421 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK- 473
Query: 1030 LDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
D R+ P + + E+ +C NP RP+ ++ Q +
Sbjct: 474 -DYRMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 31/263 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 77
Query: 883 CSHVRHSLAMILSNNAA--------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + ++ ++ + +++ + + + Y+H I+HRD
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 134
Query: 935 ISSKNVLLDFDNEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK--- 989
+ S N+ L D + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPY 191
Query: 990 ---CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
DVY+FG++ E++ G+ P I + L P L S + +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY---LSPDL---SKVRSNCPK 245
Query: 1047 SIVEVAISCLDENPESRPTMPKV 1069
++ + CL + + RP P++
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQI 268
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 807 YEEIIRATNDFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNE 864
Y++ D +H +G G G VY+ + VAVK E T + +EFL E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 266
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIK 913
+ EI+H N+V+ G C+ +I L + R N +
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY 973
IS A+ Y+ F +HR+++++N L+ ++ V+DFG+++ + D+ +T AG
Sbjct: 326 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 380
Query: 974 ---GYVAPE-LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDE 1028
+ APE LAY K + K DV++FGVL E+ G P I L L++
Sbjct: 381 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK 434
Query: 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
D R+ P + + E+ +C NP RP+ ++ Q +
Sbjct: 435 --DYRMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 92
Query: 883 CSHVRHSLAMILSNNAA--------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + ++ ++ + +++ + + + Y+H I+HRD
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 149
Query: 935 ISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAYTMKVTE 988
+ S N+ L D + DFG+A + S W+ +L+G+ ++APE+ +++ +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---IRMQD 202
Query: 989 K------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQ 1042
K DVY+FG++ E++ G+ P I + L P L S +
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY---LSPDL---SKVRS 256
Query: 1043 DKLISIVEVAISCLDENPESRPTMPKV 1069
+ ++ + CL + + RP P++
Sbjct: 257 NCPKAMKRLMAECLKKKRDERPLFPQI 283
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 69
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I+ L + R N + IS A+ Y+
Sbjct: 70 PNLVQLLGVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ T AG + APE
Sbjct: 129 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 183
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 184 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 235
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 236 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 74 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 239
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 240 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 69 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 234
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 235 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 69 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 234
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 235 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 74 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 239
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 240 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 69 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 234
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 235 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 72
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 73 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 132 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 186
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 187 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 238
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 239 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 69 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 234
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 235 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 70
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 71 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 184
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 236
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 237 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 70
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 71 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 184
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 236
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 237 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 74 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 239
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 240 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 69
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 70 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 129 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPE 183
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 184 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 235
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 236 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
Length = 282
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 31/263 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 74
Query: 883 CSHVRHSLAMILSNNAA--------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + ++ ++ + +++ + + + Y+H I+HRD
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRD 131
Query: 935 ISSKNVLLDFDNEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK--- 989
+ S N+ L D + DFG+A K S + +L+G+ ++APE+ +++ +K
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKNPY 188
Query: 990 ---CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
DVY+FG++ E++ G+ P I + L P L S + +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY---LSPDL---SKVRSNCPK 242
Query: 1047 SIVEVAISCLDENPESRPTMPKV 1069
++ + CL + + RP P++
Sbjct: 243 AMKRLMAECLKKKRDERPLFPQI 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 70
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 71 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPE 184
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 236
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 237 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 66
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I+ L + R N + IS A+ Y+
Sbjct: 67 PNLVQLLGVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ T AG + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL-----LEK--DYRMERP 232
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 233 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 31/262 (11%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IGKG G V+K + + ++VA+K L ++ E+ L++ + K+YG
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 882 FCSHVRHS-LAMILSNNAAAKDLGWTRR--------MNVIKGISDALSYMHNDCFPPIVH 932
S+++ S L +I+ L R ++K I L Y+H++ +H
Sbjct: 89 --SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE---KKIH 143
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDV 992
RDI + NVLL + ++DFG+A L GT ++APE+ K D+
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 993 YSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVA 1052
+S G+ A+E+ KG+ P +++ L P+ P +V D S E
Sbjct: 204 WSLGITAIELAKGEPPNS----------DMHPMRVLFLIPK-NNPPTLVGDFTKSFKEFI 252
Query: 1053 ISCLDENPESRPTMPKVSQLLK 1074
+CL+++P RPT +LLK
Sbjct: 253 DACLNKDPSFRPT---AKELLK 271
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 38/208 (18%)
Query: 824 GKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG-- 881
+G G V+KA+L + E VAVK F P+ + ++Q E+ EV +L ++H NI++F G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIF--PIQDKQSWQNEY--EVYSLPGMKHENILQFIGAE 87
Query: 882 -------------FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDC-- 926
H + SL+ L N + W ++ + ++ L+Y+H D
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANVVS----WNELCHIAETMARGLAYLHEDIPG 143
Query: 927 -----FPPIVHRDISSKNVLLDFDNEAHVSDFGIA-KFLKPDSSNWTE-LAGTYGYVAPE 979
P I HRDI SKNVLL + A ++DFG+A KF S+ T GT Y+APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 980 -----LAYTMKVTEKCDVYSFGVLALEV 1002
+ + + D+Y+ G++ E+
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen
Length = 284
Score = 74.3 bits (181), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKK--FHSPLPGEMTFQQEFLNEVKALTEIR 872
+DFD +GKG G+VY A + + K F S L E + + E++ + +R
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-GVEHQLRREIEIQSHLR 72
Query: 873 HRNIVKFYGFCSHVRHSLAMILS---NNAAAKDL------GWTRRMNVIKGISDALSYMH 923
H NI++ Y + H R + ++L K+L R ++ ++DAL Y H
Sbjct: 73 HPNILRMYNYF-HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
++HRDI +N+L+ + E ++DFG + + S + GT Y+ PE+
Sbjct: 132 ER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHPRD 1010
EK D++ GVL E + G P D
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.3 bits (181), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IGKG G V + G VAVK + Q FL E +T++RH N+V+ G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHSNLVQLLGV 67
Query: 883 CSHVRHSLAMILSNNAAAK--DLGWTRRMNVIKG---------ISDALSYMHNDCFPPIV 931
+ L ++ A D +R +V+ G + +A+ Y+ + F V
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---V 124
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEK 989
HRD++++NVL+ DN A VSDFG+ K ++ T+ G + APE K + K
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 990 CDVYSFGVLALEV 1002
DV+SFG+L E+
Sbjct: 180 SDVWSFGILLWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.3 bits (181), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IGKG G V + G VAVK + Q FL E +T++RH N+V+ G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHSNLVQLLGV 82
Query: 883 CSHVRHSLAMILSNNAAAK--DLGWTRRMNVIKG---------ISDALSYMHNDCFPPIV 931
+ L ++ A D +R +V+ G + +A+ Y+ + F V
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---V 139
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEK 989
HRD++++NVL+ DN A VSDFG+ K ++ T+ G + APE K + K
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 990 CDVYSFGVLALEV 1002
DV+SFG+L E+
Sbjct: 195 SDVWSFGILLWEI 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 38/269 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G V+ + + VA+K G M+ +++F+ E + + ++ H +V+ YG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 883 C-SHVRHSLAMILSNNAAAKDLGWTRR--------MNVIKGISDALSYMHNDCFPPIVHR 933
C L + D T+R + + + + ++Y+ C ++HR
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D++++N L+ + VSDFG+ +F+ D +T GT + +PE+ + + K
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 991 DVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS-- 1047
DV+SFGVL EV +GK P + N + D RL P +L S
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------RLASTH 230
Query: 1048 IVEVAISCLDENPESRPTMPK-VSQLLKI 1075
+ ++ C E PE RP + + QL +I
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 38/269 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G V+ + + VA+K G M+ +++F+ E + + ++ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 883 C-SHVRHSLAMILSNNAAAKDLGWTRR--------MNVIKGISDALSYMHNDCFPPIVHR 933
C L + D T+R + + + + ++Y+ C ++HR
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D++++N L+ + VSDFG+ +F+ D +T GT + +PE+ + + K
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 991 DVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS-- 1047
DV+SFGVL EV +GK P + N + D RL P +L S
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------RLASTH 232
Query: 1048 IVEVAISCLDENPESRPTMPK-VSQLLKI 1075
+ ++ C E PE RP + + QL +I
Sbjct: 233 VYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKK--FHSPLPGEMTFQQEFLNEVKALTEIR 872
+DFD +GKG G+VY A + + K F S L E + + E++ + +R
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-GVEHQLRREIEIQSHLR 72
Query: 873 HRNIVKFYGFCSHVRHSLAMILS---NNAAAKDL------GWTRRMNVIKGISDALSYMH 923
H NI++ Y + H R + ++L K+L R ++ ++DAL Y H
Sbjct: 73 HPNILRMYNYF-HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
++HRDI +N+L+ + E ++DFG + + S + GT Y+ PE+
Sbjct: 132 ER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHPRD 1010
EK D++ GVL E + G P D
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKK--FHSPLPGEMTFQQEFLNEVKALTEIR 872
+DFD +GKG G+VY A + + K F S L E + + E++ + +R
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-GVEHQLRREIEIQSHLR 73
Query: 873 HRNIVKFYGFCSHVRHSLAMILS---NNAAAKDL------GWTRRMNVIKGISDALSYMH 923
H NI++ Y + H R + ++L K+L R ++ ++DAL Y H
Sbjct: 74 HPNILRMYNYF-HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 132
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
++HRDI +N+L+ + E ++DFG + + S + GT Y+ PE+
Sbjct: 133 ER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEG 187
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHPRD 1010
EK D++ GVL E + G P D
Sbjct: 188 KTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 66
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 67 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPE 180
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL-----LEK--DYRMERP 232
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 233 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.9 bits (180), Expect = 5e-13, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 132/294 (44%), Gaps = 70/294 (23%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G V+ AE +VAVK P + +++F E + LT ++H +I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHI 79
Query: 877 VKFYGFC----------SHVRHS-----------LAMILSN---NAAAKDLGWTRRMNVI 912
VKFYG C +++H AMIL + A +LG ++ +++
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 913 KGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG- 971
I+ + Y+ + F VHRD++++N L+ + + DFG+++ + S+++ + G
Sbjct: 140 SQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGGH 194
Query: 972 ---TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALD 1027
++ PE K T + DV+SFGV+ E+ GK P ++
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW------------FQLSNT 242
Query: 1028 EMLDPRLPTPSCIVQDKLI--------SIVEVAISCLDENPESRPTMPKVSQLL 1073
E+++ CI Q +++ + +V + C P+ R + ++ ++L
Sbjct: 243 EVIE-------CITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 53/277 (19%)
Query: 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V+ L A +VAVK LP ++ + +FL E + L + H NIV+ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTR----RMNV---IKGISDA---LSYMHNDCFPPIV 931
C+ + + +++ L + R R+ V ++ + DA + Y+ + C +
Sbjct: 180 VCTQ-KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG-----------YVAPEL 980
HRD++++N L+ N +SDFG+++ E G Y + APE
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR---------EEADGVYAASGGLRQVPVKWTAPEA 286
Query: 981 AYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDP--RLPTP 1037
+ + + DV+SFG+L E G P + N E ++ RLP P
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLS---------NQQTREFVEKGGRLPCP 337
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ D + ++E C P RP+ + Q L+
Sbjct: 338 E-LCPDAVFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 38/269 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G V+ + + VA+K G M+ +++F+ E + + ++ H +V+ YG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 883 C-SHVRHSLAMILSNNAAAKDLGWTRR--------MNVIKGISDALSYMHNDCFPPIVHR 933
C L + D T+R + + + + ++Y+ C ++HR
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D++++N L+ + VSDFG+ +F+ D +T GT + +PE+ + + K
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 991 DVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS-- 1047
DV+SFGVL EV +GK P + N + D RL P +L S
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------RLASTH 235
Query: 1048 IVEVAISCLDENPESRPTMPK-VSQLLKI 1075
+ ++ C E PE RP + + QL +I
Sbjct: 236 VYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 883 C--------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
S + H L +I + K +++ + + + Y+H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK------LIDIARQTAQGMDYLHAK--- 151
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAY 982
I+HRD+ S N+ L D + DFG+A + S W+ +L+G+ ++APE+
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV-- 205
Query: 983 TMKVTEK------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPT 1036
+++ +K DVY+FG++ E++ G+ P I + L P L
Sbjct: 206 -IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG---YLSPDL-- 259
Query: 1037 PSCIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
S + + ++ + CL + + RP P++
Sbjct: 260 -SKVRSNCPKAMKRLMAECLKKKRDERPLFPQI 291
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 43/269 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 99
Query: 883 C--------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
S + H L +I + K +++ + + + Y+H
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK------LIDIARQTAQGMDYLHAK--- 150
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKV 986
I+HRD+ S N+ L D + DFG+A K S + +L+G+ ++APE+ +++
Sbjct: 151 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRM 207
Query: 987 TEK------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCI 1040
+K DVY+FG++ E++ G+ P I + L P L S +
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG---YLSPDL---SKV 261
Query: 1041 VQDKLISIVEVAISCLDENPESRPTMPKV 1069
+ ++ + CL + + RP P++
Sbjct: 262 RSNCPKAMKRLMAECLKKKRDERPLFPQI 290
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 43/269 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 100
Query: 883 C--------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
S + H L +I + K +++ + + + Y+H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK------LIDIARQTAQGMDYLHAK--- 151
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKV 986
I+HRD+ S N+ L D + DFG+A K S + +L+G+ ++APE+ +++
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRM 208
Query: 987 TEK------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCI 1040
+K DVY+FG++ E++ G+ P I + L P L S +
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG---YLSPDL---SKV 262
Query: 1041 VQDKLISIVEVAISCLDENPESRPTMPKV 1069
+ ++ + CL + + RP P++
Sbjct: 263 RSNCPKAMKRLMAECLKKKRDERPLFPQI 291
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 74 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ T AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 187
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEK--DYRMERP 239
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 240 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 43/269 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 883 C--------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
S + H L +I + K +++ + + + Y+H
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIK------LIDIARQTAQGMDYLHAK--- 123
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKV 986
I+HRD+ S N+ L D + DFG+A K S + +L+G+ ++APE+ +++
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRM 180
Query: 987 TEK------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCI 1040
+K DVY+FG++ E++ G+ P I + L P L S +
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG---YLSPDL---SKV 234
Query: 1041 VQDKLISIVEVAISCLDENPESRPTMPKV 1069
+ ++ + CL + + RP P++
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQI 263
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 43/269 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + +P P ++ Q F NEV L + RH NI+ F G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL---QAFKNEVGVLRKTRHVNILLFMGY 72
Query: 883 C--------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
S + H L +I + K +++ + + + Y+H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK------LIDIARQTAQGMDYLHAK--- 123
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIA--KFLKPDSSNWTELAGTYGYVAPELAYTMKV 986
I+HRD+ S N+ L D + DFG+A K S + +L+G+ ++APE+ +++
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRM 180
Query: 987 TEK------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCI 1040
+K DVY+FG++ E++ G+ P I + L P L S +
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG---YLSPDL---SKV 234
Query: 1041 VQDKLISIVEVAISCLDENPESRPTMPKV 1069
+ ++ + CL + + RP P++
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQI 263
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 38/269 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G V+ + + VA+K G M+ +++F+ E + + ++ H +V+ YG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 883 C-SHVRHSLAMILSNNAAAKDLGWTRR--------MNVIKGISDALSYMHNDCFPPIVHR 933
C L + D T+R + + + + ++Y+ C ++HR
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D++++N L+ + VSDFG+ +F+ D +T GT + +PE+ + + K
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 991 DVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS-- 1047
DV+SFGVL EV +GK P + N + D RL P +L S
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------RLASTH 233
Query: 1048 IVEVAISCLDENPESRPTMPK-VSQLLKI 1075
+ ++ C E PE RP + + QL +I
Sbjct: 234 VYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 38/269 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G V+ + + VA+K G M+ + +F+ E + + ++ H +V+ YG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE---GSMS-EDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 883 C-SHVRHSLAMILSNNAAAKDLGWTRR--------MNVIKGISDALSYMHNDCFPPIVHR 933
C L + D T+R + + + + ++Y+ C ++HR
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D++++N L+ + VSDFG+ +F+ D +T GT + +PE+ + + K
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 991 DVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS-- 1047
DV+SFGVL EV +GK P + N + D RL P +L S
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------RLASTH 252
Query: 1048 IVEVAISCLDENPESRPTMPK-VSQLLKI 1075
+ ++ C E PE RP + + QL +I
Sbjct: 253 VYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.2 bits (178), Expect = 8e-13, Method: Composition-based stats.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 38/274 (13%)
Query: 820 EHCIGKGGQGSVYKAEL--ASGEI---VAVKKFHSPLPGEMTFQQ-EFLNEVKALTEIRH 873
+ IG G G VYK L +SG+ VA+K + G Q+ +FL E + + H
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA---GYTEKQRVDFLGEAGIMGQFSH 105
Query: 874 RNIVKFYGFCSHVRHSLAMI--LSNNAAAK-------DLGWTRRMNVIKGISDALSYMHN 924
NI++ G S + + + + N A K + + + +++GI+ + Y+ N
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-SSNWTELAGTYG--YVAPELA 981
+ VHRD++++N+L++ + VSDFG+++ L+ D + +T G + APE
Sbjct: 166 MNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 982 YTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDP-RLPTPSC 1039
K T DV+SFG++ EV+ G+ P L+ + + + D RLPTP
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERP--------YWELSNHEVMKAINDGFRLPTP-- 272
Query: 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
D +I ++ + C + RP + +L
Sbjct: 273 --MDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.2 bits (178), Expect = 8e-13, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 20/197 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQE---FLNEVKALTEIRHRNIVK 878
IG+G G V A E SG VAVK ++ QQ NEV + + +H N+V+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM------DLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 879 FY-GFCSHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIV 931
Y + + M A D+ R+N V + + AL+Y+H ++
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVI 163
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
HRDI S ++LL D +SDFG + D L GT ++APE+ + D
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G++ +E++ G+ P
Sbjct: 224 IWSLGIMVIEMVDGEPP 240
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 33/263 (12%)
Query: 817 FDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
F D IG G G+VY A ++ + E+VA+KK Q+ + EV+ L ++RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 876 IVKFYGFCSHVRHSLAMILSNN-AAAKDLGWTRR--------MNVIKGISDALSYMHNDC 926
+++ G C H+ +++ +A DL + V G L+Y+H+
Sbjct: 77 TIQYRG-CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH- 134
Query: 927 FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 986
++HRD+ + N+LL + DFG A + P + GT ++APE+ M
Sbjct: 135 --NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDE 188
Query: 987 TE---KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPT-PSCIVQ 1042
+ K DV+S G+ +E+ + K P +N AL + P S
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPP--------LFNMNAMSALYHIAQNESPALQSGHWS 240
Query: 1043 DKLISIVEVAISCLDENPESRPT 1065
+ + V+ SCL + P+ RPT
Sbjct: 241 EYFRNFVD---SCLQKIPQDRPT 260
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IGKG G V + G VAVK + Q FL E +T++RH N+V+ G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHSNLVQLLGV 254
Query: 883 CSHVRHSLAMILSNNAAAK--DLGWTRRMNVIKG---------ISDALSYMHNDCFPPIV 931
+ L ++ A D +R +V+ G + +A+ Y+ + F V
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---V 311
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKVTEK 989
HRD++++NVL+ DN A VSDFG+ K ++ T+ G + APE K + K
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 990 CDVYSFGVLALEV 1002
DV+SFG+L E+
Sbjct: 367 SDVWSFGILLWEI 379
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 43/287 (14%)
Query: 812 RATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEF 861
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 862 LNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILSN----------NAAAKDLGWTRRMN 910
E++ L ++H NIVK+ G C S R +L +I+ A A+ + + +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ 121
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--- 967
I + Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 122 YTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNL 1022
+ APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 238
Query: 1023 NIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 239 MIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 281
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 41/274 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY+ + VAVK E T + +EFL E + EI+H
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 66
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ +I L + R N + IS A+ Y+
Sbjct: 67 PNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ T AG + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 980 -LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
LAY K + K DV++FGVL E+ G P I L L++ D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL-----LEK--DYRMERP 232
Query: 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071
+ + E+ +C NP RP+ ++ Q
Sbjct: 233 EGCPE----KVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
Length = 348
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 33/263 (12%)
Query: 817 FDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
F D IG G G+VY A ++ + E+VA+KK Q+ + EV+ L ++RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 876 IVKFYGFCSHVRHSLAMILSNN-AAAKDLGWTRR--------MNVIKGISDALSYMHNDC 926
+++ G C H+ +++ +A DL + V G L+Y+H+
Sbjct: 116 TIQYRG-CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH- 173
Query: 927 FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 986
++HRD+ + N+LL + DFG A + P + GT ++APE+ M
Sbjct: 174 --NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDE 227
Query: 987 TE---KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPT-PSCIVQ 1042
+ K DV+S G+ +E+ + K P +N AL + P S
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPP--------LFNMNAMSALYHIAQNESPALQSGHWS 279
Query: 1043 DKLISIVEVAISCLDENPESRPT 1065
+ + V+ SCL + P+ RPT
Sbjct: 280 EYFRNFVD---SCLQKIPQDRPT 299
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 27/193 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IGKG G V + G VAVK + Q FL E +T++RH N+V+ G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----QAFLAEASVMTQLRHSNLVQLLGV 73
Query: 883 CSHVRHSLAMILSNNAAAK--DLGWTRRMNVIKG---------ISDALSYMHNDCFPPIV 931
+ L ++ A D +R +V+ G + +A+ Y+ + F V
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF---V 130
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEK 989
HRD++++NVL+ DN A VSDFG+ K ++ T+ G + APE + K
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 990 CDVYSFGVLALEV 1002
DV+SFG+L E+
Sbjct: 186 SDVWSFGILLWEI 198
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAELAS-GEIVAVKKFHSPLPGEMTF--QQEFLNEVKALTEIR 872
D++ + IG G G K S G+I+ K+ G MT +Q ++EV L E++
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQMLVSEVNLLRELK 63
Query: 873 HRNIVKFYGFCSHVRHSLAMILSNNAAAKDL------GWTRR--------MNVIKGISDA 918
H NIV++Y ++ I+ DL G R + V+ ++ A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 919 LSYMH--NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 976
L H +D ++HRD+ NV LD + DFG+A+ L D E GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 977 APELAYTMKVTEKCDVYSFGVLALEV 1002
+PE M EK D++S G L E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 41/271 (15%)
Query: 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V+ L A +VAVK LP ++ + +FL E + L + H NIV+ G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTR----RMNV---IKGISDA---LSYMHNDCFPPIV 931
C+ + + +++ L + R R+ V ++ + DA + Y+ + C +
Sbjct: 180 VCTQ-KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-----TYGYVAPELAYTMKV 986
HRD++++N L+ N +SDFG++ + ++ +G + APE +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMS---REEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 987 TEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDP--RLPTPSCIVQD 1043
+ + DV+SFG+L E G P + N E ++ RLP P + D
Sbjct: 293 SSESDVWSFGILLWETFSLGASPYPNLS---------NQQTREFVEKGGRLPCPE-LCPD 342
Query: 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ ++E C P RP+ + Q L+
Sbjct: 343 AVFRLME---QCWAYEPGQRPSFSTIYQELQ 370
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAELAS-GEIVAVKKFHSPLPGEMTF--QQEFLNEVKALTEIR 872
D++ + IG G G K S G+I+ K+ G MT +Q ++EV L E++
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQMLVSEVNLLRELK 63
Query: 873 HRNIVKFYGFCSHVRHSLAMILSNNAAAKDL------GWTRR--------MNVIKGISDA 918
H NIV++Y ++ I+ DL G R + V+ ++ A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 919 LSYMH--NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 976
L H +D ++HRD+ NV LD + DFG+A+ L D+S GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 977 APELAYTMKVTEKCDVYSFGVLALEV 1002
+PE M EK D++S G L E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 39/275 (14%)
Query: 820 EHCIGKGGQGSVYKAEL---ASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
E IG G G V L EI VA+K S + +++FL+E + + H N
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ--RRDFLSEASIMGQFDHPN 95
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYMHN 924
++ G + + + MI++ L R N +++GI+ + Y+ +
Sbjct: 96 VIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD 153
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YVAPE 979
+ VHRD++++N+L++ + VSDFG+++FL+ D+S+ T + G + APE
Sbjct: 154 MNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 980 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPS 1038
K T DV+S+G++ EV+ G+ P + +N I D L P + PS
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVINA-IEQDYRLPPPMDCPS 267
Query: 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
+ Q + + C ++ RP ++ L
Sbjct: 268 ALHQ--------LMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAELAS-GEIVAVKKFHSPLPGEMTF--QQEFLNEVKALTEIR 872
D++ + IG G G K S G+I+ K+ G MT +Q ++EV L E++
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQMLVSEVNLLRELK 63
Query: 873 HRNIVKFYGFCSHVRHSLAMILSNNAAAKDL------GWTRR--------MNVIKGISDA 918
H NIV++Y ++ I+ DL G R + V+ ++ A
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 919 LSYMH--NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 976
L H +D ++HRD+ NV LD + DFG+A+ L D+S GT Y+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 977 APELAYTMKVTEKCDVYSFGVLALEV 1002
+PE M EK D++S G L E+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 43/270 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 883 CS---------HVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
S ++ + K L + +++ I+ ++Y+ + VHR
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHR 135
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D+ + N+L+ + V+DFG+A+ + + + WT G + APE A + T K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 991 DVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQDK 1044
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 194 DVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE-- 239
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C + PE RPT + L+
Sbjct: 240 --SLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-4-
Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-8-
Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 35/257 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V + VA+K G M+ + EF+ E K + + H +V+ YG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRM----------NVIKGISDALSYMHNDCFPPIVH 932
C+ R + +I A L + R M + K + +A+ Y+ + F +H
Sbjct: 79 CTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF---LH 134
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD++++N L++ VSDFG+++++ D +T G+ + PE+ K + K
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 990 CDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
D+++FGVL E+ GK P + N A RL P + +K+ +I
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPH-LASEKVYTI 244
Query: 1049 VEVAISCLDENPESRPT 1065
+ SC E + RPT
Sbjct: 245 M---YSCWHEKADERPT 258
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 35/257 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V + VA+K G M+ + EF+ E K + + H +V+ YG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRM----------NVIKGISDALSYMHNDCFPPIVH 932
C+ R + +I A L + R M + K + +A+ Y+ + F +H
Sbjct: 72 CTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF---LH 127
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD++++N L++ VSDFG+++++ D +T G+ + PE+ K + K
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 990 CDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
D+++FGVL E+ GK P + N A RL P + +K+ +I
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPH-LASEKVYTI 237
Query: 1049 VEVAISCLDENPESRPT 1065
+ SC E + RPT
Sbjct: 238 M---YSCWHEKADERPT 251
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 35/257 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V + VA+K G M+ + EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRM----------NVIKGISDALSYMHNDCFPPIVH 932
C+ R + +I A L + R M + K + +A+ Y+ + F +H
Sbjct: 73 CTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF---LH 128
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD++++N L++ VSDFG+++++ D +T G+ + PE+ K + K
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 990 CDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
D+++FGVL E+ GK P + N A RL P + +K+ +I
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPH-LASEKVYTI 238
Query: 1049 VEVAISCLDENPESRPT 1065
+ SC E + RPT
Sbjct: 239 M---YSCWHEKADERPT 252
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 35/257 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V + VA+K G M+ + EF+ E K + + H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRM----------NVIKGISDALSYMHNDCFPPIVH 932
C+ R + +I A L + R M + K + +A+ Y+ + F +H
Sbjct: 88 CTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF---LH 143
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD++++N L++ VSDFG+++++ D +T G+ + PE+ K + K
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 990 CDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
D+++FGVL E+ GK P + N A RL P + +K+ +I
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPH-LASEKVYTI 253
Query: 1049 VEVAISCLDENPESRPT 1065
+ SC E + RPT
Sbjct: 254 M---YSCWHEKADERPT 267
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 35/257 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V + VA+K G M+ + EF+ E K + + H +V+ YG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRM----------NVIKGISDALSYMHNDCFPPIVH 932
C+ R + +I A L + R M + K + +A+ Y+ + F +H
Sbjct: 68 CTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF---LH 123
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD++++N L++ VSDFG+++++ D +T G+ + PE+ K + K
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 990 CDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
D+++FGVL E+ GK P + N A RL P + +K+ +I
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPH-LASEKVYTI 233
Query: 1049 VEVAISCLDENPESRPT 1065
+ SC E + RPT
Sbjct: 234 M---YSCWHEKADERPT 247
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 35/257 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V + VA+K G M+ + EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRM----------NVIKGISDALSYMHNDCFPPIVH 932
C+ R + +I A L + R M + K + +A+ Y+ + F +H
Sbjct: 73 CTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF---LH 128
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD++++N L++ VSDFG+++++ D +T G+ + PE+ K + K
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 990 CDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
D+++FGVL E+ GK P + N A RL P + +K+ +I
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPH-LASEKVYTI 238
Query: 1049 VEVAISCLDENPESRPT 1065
+ SC E + RPT
Sbjct: 239 M---YSCWHEKADERPT 252
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 43/270 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 883 ---------CSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
C ++ + K L + +++ I+ ++Y+ + VHR
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 991 DVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQDK 1044
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 197 DVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE-- 242
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 243 --SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 27/257 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY- 880
+G GG V+ A +L VAVK + L + +F F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 881 -GFCSHVRHSLAMILS---NNAAAKDLGWT-------RRMNVIKGISDALSYMHNDCFPP 929
G L I+ + +D+ T R + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---G 136
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYTMKV 986
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A V
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 987 TEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DVYS G + EV+ G+ P +++A + + +P PS +
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVREDPIP-PSARHEGLSA 248
Query: 1047 SIVEVAISCLDENPESR 1063
+ V + L +NPE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 37/266 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G V+ + + VA+K G M+ +++F+ E + + ++ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS-EEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 883 C-SHVRHSLAMILSNNAAAKDLGWTRR--------MNVIKGISDALSYMHNDCFPPIVHR 933
C L + D T+R + + + + ++Y+ ++HR
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHR 127
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D++++N L+ + VSDFG+ +F+ D +T GT + +PE+ + + K
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 991 DVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS-- 1047
DV+SFGVL EV +GK P + N + D RL P +L S
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDISTGFRLYKP------RLASTH 232
Query: 1048 IVEVAISCLDENPESRPTMPKVSQLL 1073
+ ++ C E PE RP ++ + L
Sbjct: 233 VYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 35/266 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 386
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 990 CDVYSFGVLALE-VIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
DV+SFG+L E KG+ P + +N + R+P P + S+
Sbjct: 445 SDVWSFGILLTELTTKGRVPYPGM-------VNREVLDQVERGYRMPCPPECPE----SL 493
Query: 1049 VEVAISCLDENPESRPTMPKVSQLLK 1074
++ C + PE RPT + L+
Sbjct: 494 HDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of Activation
For Tec Family Kinases
Length = 283
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 35/257 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V + VA+K G M+ + EF+ E K + + H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE---GSMS-EDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRM----------NVIKGISDALSYMHNDCFPPIVH 932
C+ R + +I A L + R M + K + +A+ Y+ + F +H
Sbjct: 88 CTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF---LH 143
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD++++N L++ VSDFG+++++ D T G+ + PE+ K + K
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 990 CDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
D+++FGVL E+ GK P + N A RL P + +K+ +I
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQGLRLYRPH-LASEKVYTI 253
Query: 1049 VEVAISCLDENPESRPT 1065
+ SC E + RPT
Sbjct: 254 M---YSCWHEKADERPT 267
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 35/266 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 303
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
DV+SFG+L E+ KG+ P +N + R+P P + S+
Sbjct: 362 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 410
Query: 1049 VEVAISCLDENPESRPTMPKVSQLLK 1074
++ C + PE RPT + L+
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 27/257 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY- 880
+G GG V+ A +L VAVK + L + +F F E + + H IV Y
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 881 -GFCSHVRHSLAMILS---NNAAAKDLGWT-------RRMNVIKGISDALSYMHNDCFPP 929
G L I+ + +D+ T R + VI AL++ H +
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---G 153
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYTMKV 986
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A V
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 987 TEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DVYS G + EV+ G+ P +++A + + +P PS +
Sbjct: 214 DARSDVYSLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVREDPIP-PSARHEGLSA 265
Query: 1047 SIVEVAISCLDENPESR 1063
+ V + L +NPE+R
Sbjct: 266 DLDAVVLKALAKNPENR 282
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 35/266 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 303
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
DV+SFG+L E+ KG+ P +N + R+P P + S+
Sbjct: 362 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 410
Query: 1049 VEVAISCLDENPESRPTMPKVSQLLK 1074
++ C + PE RPT + L+
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 78/296 (26%), Positives = 128/296 (43%), Gaps = 45/296 (15%)
Query: 803 GKIVYEEIIRATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLP 852
G + +E+ R F++ H +GKG GSV +GE+VAVKK
Sbjct: 1 GAMAFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 58
Query: 853 GEMTFQQEFLNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILS--NNAAAKDL--GWTR 907
+ ++F E++ L ++H NIVK+ G C S R +L +I+ + +D
Sbjct: 59 EHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE 115
Query: 908 RMNVIK------GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961
R++ IK I + Y+ + +HRD++++N+L++ +N + DFG+ K L
Sbjct: 116 RIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ 172
Query: 962 DSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIX 1013
D + APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 173 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR 232
Query: 1014 XXXXXXLNLNIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 233 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 284
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 35/266 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 303
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
DV+SFG+L E+ KG+ P +N + R+P P + S+
Sbjct: 362 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 410
Query: 1049 VEVAISCLDENPESRPTMPKVSQLLK 1074
++ C + PE RPT + L+
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG+G G VYKA+ GE A+KK E + E+ L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDV 68
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG-------------ISDALSYMHNDCFPP 929
H + L ++ + D + ++V +G + + ++Y H+
Sbjct: 69 I-HTKKRLVLVFEH----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTE 988
++HRD+ +N+L++ + E ++DFG+A+ +T T Y AP+ L + K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 989 KCDVYSFGVLALEVIKG 1005
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 27/257 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G GG V+ A +L VAVK + L + +F F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 882 FCSHVRHS-----LAMILSNNAAAKDLGWT-------RRMNVIKGISDALSYMHNDCFPP 929
+ + M + +D+ T R + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---G 136
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYTMKV 986
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A V
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 987 TEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DVYS G + EV+ G+ P +++A + + +P PS +
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVREDPIP-PSARHEGLSA 248
Query: 1047 SIVEVAISCLDENPESR 1063
+ V + L +NPE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG+G G VYKA+ GE A+KK E + E+ L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDV 68
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG-------------ISDALSYMHNDCFPP 929
H + L ++ + D + ++V +G + + ++Y H+
Sbjct: 69 I-HTKKRLVLVFEH----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTE 988
++HRD+ +N+L++ + E ++DFG+A+ +T T Y AP+ L + K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 989 KCDVYSFGVLALEVIKG 1005
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + +IRH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 137
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQD 1043
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE- 242
Query: 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 243 ---SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 822 CIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
C+GKG G V++ GE VAVK F S + E N V +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 69
Query: 882 FCSHVRHSLAMI-----------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF--- 927
RHS + L + L + ++ I+ L+++H + F
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 928 --PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA-----GTYGYVAPE- 979
P I HRD+ SKN+L+ + + ++D G+A + S+N ++ GT Y+APE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 980 LAYTMKVT-----EKCDVYSFGVLALEVIK 1004
L T++V ++ D+++FG++ EV +
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
Length = 301
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 822 CIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
C+GKG G V++ GE VAVK F S + E N V +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 69
Query: 882 FCSHVRHSLAMI-----------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF--- 927
RHS + L + L + ++ I+ L+++H + F
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 928 --PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA-----GTYGYVAPE- 979
P I HRD+ SKN+L+ + + ++D G+A + S+N ++ GT Y+APE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 980 LAYTMKVT-----EKCDVYSFGVLALEVIK 1004
L T++V ++ D+++FG++ EV +
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
Length = 288
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG+G G VYKA+ GE A+KK E + E+ L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDV 68
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG-------------ISDALSYMHNDCFPP 929
H + L ++ + D + ++V +G + + ++Y H+
Sbjct: 69 I-HTKKRLVLVFEH----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTE 988
++HRD+ +N+L++ + E ++DFG+A+ +T T Y AP+ L + K +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 989 KCDVYSFGVLALEVIKG 1005
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb
Length = 311
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 27/257 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY- 880
+G GG V+ A +L VAVK + L + +F F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 881 -GFCSHVRHSLAMILS---NNAAAKDLGWT-------RRMNVIKGISDALSYMHNDCFPP 929
G L I+ + +D+ T R + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---G 136
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYTMKV 986
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A V
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 987 TEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DVYS G + EV+ G+ P +++A + + +P PS +
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVREDPIP-PSARHEGLSA 248
Query: 1047 SIVEVAISCLDENPESR 1063
+ V + L +NPE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP
DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 27/257 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY- 880
+G GG V+ A +L VAVK + L + +F F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 881 -GFCSHVRHSLAMILS---NNAAAKDLGWT-------RRMNVIKGISDALSYMHNDCFPP 929
G L I+ + +D+ T R + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---G 136
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYTMKV 986
I+HRD+ N+++ N V DFGIA+ + ++ T+ A GT Y++PE A V
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 987 TEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DVYS G + EV+ G+ P F ++A + + +P PS +
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP--FTGDSPD-----SVAYQHVREDPIP-PSARHEGLSA 248
Query: 1047 SIVEVAISCLDENPESR 1063
+ V + L +NPE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 137
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD+++ N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQD 1043
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE- 242
Query: 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 243 ---SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IGKG G V+K + + ++VA+K L ++ E+ L++ + K+YG
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 882 -FCSHVRHSLAMILSNNAAAKDL------GWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + + M +A DL T+ +++ I L Y+H++ +HRD
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRD 149
Query: 935 ISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYS 994
I + NVLL E ++DFG+A L GT ++APE+ K D++S
Sbjct: 150 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWS 209
Query: 995 FGVLALEVIKGKHP 1008
G+ A+E+ +G+ P
Sbjct: 210 LGITAIELARGEPP 223
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 35/266 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGNMS-PEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 304
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY---GYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+ + + + + +T G + APE A + T K
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
DV+SFG+L E+ KG+ P +N + R+P P + S+
Sbjct: 363 SDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPPECPE----SL 411
Query: 1049 VEVAISCLDENPESRPTMPKVSQLLK 1074
++ C ++PE RPT + L+
Sbjct: 412 HDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 47/302 (15%)
Query: 799 LTFEGKI--VYEEIIRATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKK 846
L F+G + +E+ R F++ H +GKG GSV +GE+VAVKK
Sbjct: 20 LYFQGAMGSAFED--RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK 77
Query: 847 FHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILS--NNAAAKDL 903
+ ++F E++ L ++H NIVK+ G C S R +L +I+ + +D
Sbjct: 78 LQHSTEEHL---RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 134
Query: 904 --GWTRRMNVIK------GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGI 955
R++ IK I + Y+ + +HRD++++N+L++ +N + DFG+
Sbjct: 135 LQKHKERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGL 191
Query: 956 AKFLKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH- 1007
K L D + APE K + DV+SFGV+ E+ K K
Sbjct: 192 TKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251
Query: 1008 PRDFIXXXXXXXLNLNIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESR 1063
P +F+ I L E+L + RLP P + I + C + N R
Sbjct: 252 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQR 307
Query: 1064 PT 1065
P+
Sbjct: 308 PS 309
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 27/257 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY- 880
+G GG V+ A +L VAVK + L + +F F E + + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 881 -GFCSHVRHSLAMILS---NNAAAKDLGWT-------RRMNVIKGISDALSYMHNDCFPP 929
G L I+ + +D+ T R + VI AL++ H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---G 136
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA---GTYGYVAPELAYTMKV 986
I+HRD+ N+L+ N V DFGIA+ + ++ + A GT Y++PE A V
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 987 TEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DVYS G + EV+ G+ P +++A + + +P PS +
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVREDPIP-PSARHEGLSA 248
Query: 1047 SIVEVAISCLDENPESR 1063
+ V + L +NPE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1)
Length = 294
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 27/260 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IGKG G VYK + + E+VA+K L ++ E+ L++ I +++G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 882 -FCSHVRHSLAMILSNNAAAKDL------GWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + + M +A DL T +++ I L Y+H++ +HRD
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE---RKIHRD 141
Query: 935 ISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYS 994
I + NVLL + ++DFG+A L GT ++APE+ K D++S
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWS 201
Query: 995 FGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAIS 1054
G+ A+E+ KG+ P +L+ L P+ P+ Q E +
Sbjct: 202 LGITAIELAKGEPPNS----------DLHPMRVLFLIPKNSPPTLEGQHSK-PFKEFVEA 250
Query: 1055 CLDENPESRPTMPKVSQLLK 1074
CL+++P RPT +LLK
Sbjct: 251 CLNKDPRFRPT---AKELLK 267
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 43/270 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 883 CS---------HVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
S ++ + K L + +++ I+ ++Y+ + VHR
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 991 DVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQDK 1044
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 197 DVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE-- 242
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 243 --SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 43/270 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 883 CS---------HVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
S ++ + K L + +++ I+ ++Y+ + VHR
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 991 DVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQDK 1044
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 197 DVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE-- 242
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 243 --SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 43/288 (14%)
Query: 811 IRATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQE 860
+R F++ H +GKG GSV +GE+VAVKK + ++
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RD 57
Query: 861 FLNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILS--NNAAAKDL--GWTRRMNVIK-- 913
F E++ L ++H NIVK+ G C S R +L +I+ + +D R++ IK
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 914 ----GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT-- 967
I + Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 118 QYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 968 -ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLN 1021
+ APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234
Query: 1022 LNIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 235 QMIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 278
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 822 CIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
C+GKG G V++ GE VAVK F S + E N V +RH NI+ F
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM----LRHENILGFIA 98
Query: 882 FCSHVRHSLAMI-----------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF--- 927
RHS + L + L + ++ I+ L+++H + F
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 928 --PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA-----GTYGYVAPE- 979
P I HRD+ SKN+L+ + + ++D G+A + S+N ++ GT Y+APE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 980 LAYTMKVT-----EKCDVYSFGVLALEVIK 1004
L T++V ++ D+++FG++ EV +
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEVAR 247
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 812 RATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEF 861
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 62
Query: 862 LNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILS--NNAAAKDL--GWTRRMNVIK--- 913
E++ L ++H NIVK+ G C S R +L +I+ + +D R++ IK
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 122
Query: 914 ---GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--- 967
I + Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 123 YTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 179
Query: 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNL 1022
+ APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 180 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 239
Query: 1023 NIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 240 MIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 282
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 812 RATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEF 861
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 63
Query: 862 LNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILS--NNAAAKDL--GWTRRMNVIK--- 913
E++ L ++H NIVK+ G C S R +L +I+ + +D R++ IK
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 123
Query: 914 ---GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--- 967
I + Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 124 YTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 180
Query: 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNL 1022
+ APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 181 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 240
Query: 1023 NIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 241 MIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 283
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 126
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQD 1043
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 185 SDVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE- 231
Query: 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 232 ---SLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 137
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQD 1043
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE- 242
Query: 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 243 ---SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 128
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQD 1043
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 187 SDVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE- 233
Query: 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 234 ---SLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 137
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQD 1043
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 196 SDVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE- 242
Query: 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 243 ---SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 164/359 (45%), Gaps = 51/359 (14%)
Query: 180 SLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGN 239
S++D + E L S++ L + K + + LTNL L L+ N + D P L N
Sbjct: 33 SVTDVVTQE--ELESITKLVVAGEKVAS--IQGIEYLTNLEYLNLNGNQITDISP--LSN 86
Query: 240 LRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYN 299
L L+ L +G NK++ +L NLTNL LYL E+++S P NL LNLG N
Sbjct: 87 LVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISDISP--LANLTKXYSLNLGAN 142
Query: 300 -KLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLG 358
L+ + P L N T L L + + + P +
Sbjct: 143 HNLSDLSP--LSNXTGLNYLTVTESKVKDVTP--------------------------IA 174
Query: 359 YLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYD 418
L++L +L L N + D P L +L SL + N+++ P + N T L +L + +
Sbjct: 175 NLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGN 230
Query: 419 NSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIG 478
N ++ P NL L+ L +G N++S +++ +LT L L + N +S +
Sbjct: 231 NKITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKXLNVGSNQISD--ISVLN 284
Query: 479 NLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFA 537
NL +++L LNNN+L + +G L+NL L+L N + D P L +L FA
Sbjct: 285 NLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP--LASLSKXDSADFA 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 143/305 (46%), Gaps = 39/305 (12%)
Query: 357 LGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDL 416
+ YL+NL L L N + D P L NL L+ L +G NK++ +L NLTNL L L
Sbjct: 62 IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYL 117
Query: 417 YDNSLSGSIPSEFGNLRSLSTLSLGYN-KLSGSIPHSLGNLTNLDALYLYDNSLSGSIPG 475
++++S P NL +L+LG N LS P L N T L+ L + ++ + P
Sbjct: 118 NEDNISDISP--LANLTKXYSLNLGANHNLSDLSP--LSNXTGLNYLTVTESKVKDVTP- 172
Query: 476 EIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLS 535
I NL + +L+LN N++ P L +L++L Y N + D P + N L+ L
Sbjct: 173 -IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLK 227
Query: 536 FAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLA 595
NK++ P L L+ L L + NQ+S + K L
Sbjct: 228 IGNNKITDLSP--------------------LANLSQLTWLEIGTNQISDINAVK--DLT 265
Query: 596 QLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFL 655
+L+ L++ SN++S+ NL +L+ L L+NNQ + L +L+ L LS N +
Sbjct: 266 KLKXLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHI 323
Query: 656 REAIP 660
+ P
Sbjct: 324 TDIRP 328
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 115/264 (43%), Gaps = 41/264 (15%)
Query: 164 SLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYN-KFSGSIPHSLGNLTNLATL 222
+L NL+NL L+L ++++SD P NL L+LG N S P L N T L L
Sbjct: 105 ALQNLTNLRELYLNEDNISDISP--LANLTKXYSLNLGANHNLSDLSP--LSNXTGLNYL 160
Query: 223 YLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIP 282
+ + + D P + NL L LSL YN++ P L +LT+L Y N ++ P
Sbjct: 161 TVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP 216
Query: 283 SEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXX 342
N L+ L +G NK+ + P L NL+ L L I N +S
Sbjct: 217 --VANXTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD--------------- 257
Query: 343 XXXXXXXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIP 402
++ L+ L L + SN + D S L NL L+ L L N+L
Sbjct: 258 -----------INAVKDLTKLKXLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDX 304
Query: 403 HSLGNLTNLATLDLYDNSLSGSIP 426
+G LTNL TL L N ++ P
Sbjct: 305 EVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
Length = 294
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKK-FHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK-- 878
+G GG +VY AE I VA+K F P E T ++ F EV +++ H+NIV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR-FEREVHNSSQLSHQNIVSMI 77
Query: 879 --------FYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+Y ++ +L+ + ++ L +N I D + + H+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHD---MR 131
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT-ELAGTYGYVAPELAYTMKVTE 988
IVHRDI +N+L+D + + DFGIAK L S T + GT Y +PE A E
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 989 KCDVYSFGVLALEVIKGKHP 1008
D+YS G++ E++ G+ P
Sbjct: 192 CTDIYSIGIVLYEMLVGEPP 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 812 RATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEF 861
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 57
Query: 862 LNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILS--NNAAAKDL--GWTRRMNVIK--- 913
E++ L ++H NIVK+ G C S R +L +I+ + +D R++ IK
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 117
Query: 914 ---GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--- 967
I + Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 118 YTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNL 1022
+ APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 175 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 234
Query: 1023 NIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 235 MIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 277
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
DF + +GKG VY+AE + +G VA+K + Q NEVK +++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 875 NIVKFYGFCSHVRHS-LAMILSNNAA--------AKDLGWTRRMNVIKGISDALSYMHND 925
+I++ Y + + L + + +N K + + I + Y+H+
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK-PDSSNWTELAGTYGYVAPELAYTM 984
I+HRD++ N+LL + ++DFG+A LK P ++T L GT Y++PE+A
Sbjct: 132 ---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRS 187
Query: 985 KVTEKCDVYSFGVLALEVIKGKHPRD 1010
+ DV+S G + ++ G+ P D
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
In Complex With Staurosporine
Length = 304
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 27/260 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IGKG G V+K + + ++VA+K L ++ E+ L++ + K+YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 882 -FCSHVRHSLAMILSNNAAAKDL------GWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + + M +A DL T+ +++ I L Y+H++ +HRD
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRD 129
Query: 935 ISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYS 994
I + NVLL E ++DFG+A L GT ++APE+ K D++S
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWS 189
Query: 995 FGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAIS 1054
G+ A+E+ +G+ P + L P+ P + + + E +
Sbjct: 190 LGITAIELARGEPPHSELHPMKVL----------FLIPK-NNPPTLEGNYSKPLKEFVEA 238
Query: 1055 CLDENPESRPTMPKVSQLLK 1074
CL++ P RPT +LLK
Sbjct: 239 CLNKEPSFRPT---AKELLK 255
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 45/231 (19%)
Query: 811 IRATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALT 869
+R +DF++ +G+G G V KA A A+KK T L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLA 57
Query: 870 EIRHRNIVKFYGFCSHVRHS--------------LAMILSNNAAAKDLGWTRRMN----- 910
+ H+ +V++Y R+ + M N DL + +N
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 911 ---VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK-------FLK 960
+ + I +ALSY+H+ I+HRD+ N+ +D + DFG+AK LK
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 961 PDSS-------NWTELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 1003
DS N T GT YVA E L T EK D+YS G++ E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
Length = 304
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 27/260 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IGKG G V+K + + ++VA+K L ++ E+ L++ + K+YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 882 -FCSHVRHSLAMILSNNAAAKDL------GWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + + M +A DL T+ +++ I L Y+H++ +HRD
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRD 129
Query: 935 ISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYS 994
I + NVLL E ++DFG+A L GT ++APE+ K D++S
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWS 189
Query: 995 FGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAIS 1054
G+ A+E+ +G+ P + L P+ P + + + E +
Sbjct: 190 LGITAIELARGEPPHSELHPMKVL----------FLIPK-NNPPTLEGNYSKPLKEFVEA 238
Query: 1055 CLDENPESRPTMPKVSQLLK 1074
CL++ P RPT +LLK
Sbjct: 239 CLNKEPSFRPT---AKELLK 255
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 43/287 (14%)
Query: 812 RATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEF 861
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 862 LNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILSN----------NAAAKDLGWTRRMN 910
E++ L ++H NIVK+ G C S R +L +I+ + + + +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ 121
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--- 967
I + Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 122 YTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNL 1022
+ APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 238
Query: 1023 NIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 239 MIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 281
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 43/287 (14%)
Query: 812 RATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEF 861
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 61
Query: 862 LNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILSN----------NAAAKDLGWTRRMN 910
E++ L ++H NIVK+ G C S R +L +I+ + + + +
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 121
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--- 967
I + Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 122 YTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNL 1022
+ APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 238
Query: 1023 NIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 239 MIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 281
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 43/287 (14%)
Query: 812 RATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEF 861
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 9 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 65
Query: 862 LNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILSN----------NAAAKDLGWTRRMN 910
E++ L ++H NIVK+ G C S R +L +I+ + + + +
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 125
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--- 967
I + Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 126 YTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 182
Query: 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNL 1022
+ APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 183 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 242
Query: 1023 NIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 243 MIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 285
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 41/269 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 137
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ + V+DFG+A+ ++ + + A + APE A + T K D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 992 VYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQDKL 1045
V+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 198 VWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE--- 242
Query: 1046 ISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C ++PE RPT + L+
Sbjct: 243 -SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 45/271 (16%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 130
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEK 989
RD+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 990 CDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQD 1043
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 189 SDVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE- 235
Query: 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C + PE RPT + L+
Sbjct: 236 ---SLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain
From Human
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 31/206 (15%)
Query: 824 GKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF- 882
+G G V+KA+L + + VAVK F PL + ++Q E E+ + ++H N+++F
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIF--PLQDKQSWQSE--REIFSTPGMKHENLLQFIAAE 78
Query: 883 --CSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDC------ 926
S++ L +I L++ + W +V + +S LSY+H D
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 927 --FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGTYGYVAPE--- 979
P I HRD SKNVLL D A ++DFG+A +P + GT Y+APE
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLE 198
Query: 980 --LAYTMKVTEKCDVYSFGVLALEVI 1003
+ + + D+Y+ G++ E++
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 39/275 (14%)
Query: 820 EHCIGKGGQGSVYKAEL---ASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
E IG G G V L EI VA+K S + +++FL+E + + H N
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ--RRDFLSEASIMGQFDHPN 69
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYMHN 924
++ G + + + MI++ L R N +++GI+ + Y+ +
Sbjct: 70 VIHLEGVVT--KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD 127
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YVAPE 979
+ VHR ++++N+L++ + VSDFG+++FL+ D+S+ T + G + APE
Sbjct: 128 MNY---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 980 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPS 1038
K T DV+S+G++ EV+ G+ P + +N I D L P + PS
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVINA-IEQDYRLPPPMDCPS 241
Query: 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
+ Q + + C ++ RP ++ L
Sbjct: 242 ALHQ--------LMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 45/231 (19%)
Query: 811 IRATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALT 869
+R +DF++ +G+G G V KA A A+KK T L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLA 57
Query: 870 EIRHRNIVKFYGFCSHVRHS--------------LAMILSNNAAAKDLGWTRRMN----- 910
+ H+ +V++Y R+ + M N DL + +N
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 911 ---VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK-------FLK 960
+ + I +ALSY+H+ I+HRD+ N+ +D + DFG+AK LK
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 961 PDSS-------NWTELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 1003
DS N T GT YVA E L T EK D+YS G++ E+I
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.2 bits (165), Expect = 3e-11, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 41/269 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 883 CSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
S + SL L K L + +++ I+ ++Y+ + VH
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNY---VH 127
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ + V+DFG+A+ ++ + + A + APE A + T K D
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 992 VYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQDKL 1045
V+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 188 VWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE--- 232
Query: 1046 ISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C + PE RPT + L+
Sbjct: 233 -SLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 27/260 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IGKG G V+K + + ++VA+K L ++ E+ L++ + K+YG
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 882 -FCSHVRHSLAMILSNNAAAKDL------GWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934
+ + + M +A DL T+ +++ I L Y+H++ +HRD
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRD 144
Query: 935 ISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYS 994
I + NVLL E ++DFG+A L GT ++APE+ K D++S
Sbjct: 145 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWS 204
Query: 995 FGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAIS 1054
G+ A+E+ +G+ P + L P+ P + + + E +
Sbjct: 205 LGITAIELARGEPPHSELHPMKVL----------FLIPK-NNPPTLEGNYSKPLKEFVEA 253
Query: 1055 CLDENPESRPTMPKVSQLLK 1074
CL++ P RPT +LLK
Sbjct: 254 CLNKEPSFRPT---AKELLK 270
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 43/270 (15%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G V+ VA+K PG M+ + FL E + + ++RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 883 CS---------HVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
S ++ + K L + +++ I+ ++Y+ + VHR
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHR 135
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVTEKC 990
D+ + N+L+ + V+DFG+A+ + + + +T G + APE A + T K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 991 DVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLDP-----RLPTPSCIVQDK 1044
DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 194 DVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPPECPE-- 239
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLLK 1074
S+ ++ C + PE RPT + L+
Sbjct: 240 --SLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 51/285 (17%)
Query: 817 FDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
F+ +G G G VYK + +G++ A+K E +QE +N +K + HRN
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE-INMLKKYSH--HRN 82
Query: 876 IVKFYGFCSHVRHS---------LAMILSNNAAAKDLGWTRRMNVIKG---------ISD 917
I +YG + ++ + L M + DL + N +K I
Sbjct: 83 IATYYG--AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 140
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 977
LS++H ++HRDI +NVLL + E + DFG++ L GT ++A
Sbjct: 141 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 197
Query: 978 PELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDP 1032
PE+ + + K D++S G+ A+E+ +G P +++ L P
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP----------LCDMHPMRALFLIP 247
Query: 1033 RLPTP---SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
R P P S K S +E SCL +N RP QL+K
Sbjct: 248 RNPAPRLKSKKWSKKFQSFIE---SCLVKNHSQRPA---TEQLMK 286
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 43/282 (15%)
Query: 817 FDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVK 866
F++ H +GKG GSV +GE+VAVKK + ++F E++
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 61
Query: 867 ALTEIRHRNIVKFYGFC-SHVRHSLAMILS--NNAAAKDL--GWTRRMNVIK------GI 915
L ++H NIVK+ G C S R +L +I+ + +D R++ IK I
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGT 972
+ Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 122 CKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNLNIA-- 1025
+ APE K + DV+SFGV+ E+ K K P +F+ I
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 238
Query: 1026 LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
L E+L + RLP P + I + C + N RP+
Sbjct: 239 LIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 276
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor
Nvp-Bbt594
Length = 295
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 43/282 (15%)
Query: 817 FDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVK 866
F++ H +GKG GSV +GE+VAVKK + ++F E++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 63
Query: 867 ALTEIRHRNIVKFYGFC-SHVRHSLAMILSN----------NAAAKDLGWTRRMNVIKGI 915
L ++H NIVK+ G C S R +L +I+ + + + + I
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGT 972
+ Y+ + +HRD++++N+L++ +N + DFG+ K L D +
Sbjct: 124 CKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNLNIA-- 1025
+ APE K + DV+SFGV+ E+ K K P +F+ I
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 1026 LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
L E+L + RLP P + I + C + N RP+
Sbjct: 241 LIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 278
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 43/287 (14%)
Query: 812 RATNDFDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEF 861
R F++ H +GKG GSV +GE+VAVKK + ++F
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDF 59
Query: 862 LNEVKALTEIRHRNIVKFYGFC-SHVRHSLAMILSN----------NAAAKDLGWTRRMN 910
E++ L ++H NIVK+ G C S R +L +I+ + + + +
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 119
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--- 967
I + Y+ + +HR+++++N+L++ +N + DFG+ K L D +
Sbjct: 120 YTSQICKGMEYLGTKRY---IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNL 1022
+ APE K + DV+SFGV+ E+ K K P +F+
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQ 236
Query: 1023 NIA--LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
I L E+L + RLP P + I + C + N RP+
Sbjct: 237 MIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 279
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 37/266 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IG G G+VYK + V + K P P + Q F NEV L + RH NI+ F G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF---QAFRNEVAVLRKTRHVNILLFMGY 100
Query: 883 CSHVRHSLAMI--------LSNNAAAKDLGWT--RRMNVIKGISDALSYMHNDCFPPIVH 932
+ + +LA++ L + ++ + + +++ + + + Y+H I+H
Sbjct: 101 MT--KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIH 155
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVAPELAYTMK- 985
RD+ S N+ L + DFG+A S W+ + G+ ++APE+
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 986 --VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQD 1043
+ + DVYS+G++ E++ G+ P I + P S + ++
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYAS------PDLSKLYKN 265
Query: 1044 KLISIVEVAISCLDENPESRPTMPKV 1069
++ + C+ + E RP P++
Sbjct: 266 CPKAMKRLVADCVKKVKEERPLFPQI 291
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 43/282 (15%)
Query: 817 FDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVK 866
F++ H +GKG GSV +GE+VAVKK + ++F E++
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 63
Query: 867 ALTEIRHRNIVKFYGFC-SHVRHSLAMILSN----------NAAAKDLGWTRRMNVIKGI 915
L ++H NIVK+ G C S R +L +I+ + + + + I
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGT 972
+ Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 124 CKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNLNIA-- 1025
+ APE K + DV+SFGV+ E+ K K P +F+ I
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 1026 LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
L E+L + RLP P + I + C + N RP+
Sbjct: 241 LIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 278
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 31/206 (15%)
Query: 823 IGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G V+ E S I + K S +P E + E++ L + H NI+K
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME-----QIEAEIEVLKSLDHPNIIK 84
Query: 879 FYGFCSHVRHS------------LAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDC 926
+ + L I+S A K L ++K + +AL+Y H+
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ- 143
Query: 927 FPPIVHRDISSKNVLLDFDNEAH----VSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
+VH+D+ +N+L D H + DFG+A+ K D + T AGT Y+APE+ +
Sbjct: 144 --HVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEV-F 198
Query: 983 TMKVTEKCDVYSFGVLALEVIKGKHP 1008
VT KCD++S GV+ ++ G P
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.0 bits (162), Expect = 5e-11, Method: Composition-based stats.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 28/274 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F E IG+G VY+A L G VA+KK + + + + E+ L ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLG-----WTRRMNVIK---------GISDALS 920
N++K+Y S + + I+ A A DL + ++ +I + AL
Sbjct: 93 NVIKYYA--SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 921 YMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 980
+MH+ ++HRDI NV + + D G+ +F ++ L GT Y++PE
Sbjct: 151 HMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 981 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCI 1040
+ K D++S G L E+ + P +L +++ P P PS
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNLYSLCKKIEQCDYP--PLPSDH 262
Query: 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
++L +V + C++ +PE RP + V + K
Sbjct: 263 YSEELRQLVNM---CINPDPEKRPDVTYVYDVAK 293
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 43/282 (15%)
Query: 817 FDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVK 866
F++ H +GKG GSV +GE+VAVKK + ++F E++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 81
Query: 867 ALTEIRHRNIVKFYGFC-SHVRHSLAMILSN----------NAAAKDLGWTRRMNVIKGI 915
L ++H NIVK+ G C S R +L +I+ + + + + I
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGT 972
+ Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 142 CKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNLNIA-- 1025
+ APE K + DV+SFGV+ E+ K K P +F+ I
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 1026 LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
L E+L + RLP P + I + C + N RP+
Sbjct: 259 LIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 296
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 812 RATNDFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTE 870
R DF+ C+G+GG G V++A+ + A+K+ LP +++ + EVKAL +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAK 59
Query: 871 IRHRNIVKFYGF-------------CSHVRHSLAMILSNNAAAKDLGWTRR--------- 908
+ H IV+++ V + M L KD W
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKD--WMNGRCTIEERER 117
Query: 909 ---MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965
+++ I++A+ ++H+ ++HRD+ N+ D+ V DFG+ + D
Sbjct: 118 SVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 966 WTELA------------GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 1003
T L GT Y++PE + + K D++S G++ E++
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 43/282 (15%)
Query: 817 FDDEHC-----IGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVK 866
F++ H +GKG GSV +GE+VAVKK + ++F E++
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIE 81
Query: 867 ALTEIRHRNIVKFYGFC-SHVRHSLAMILSN----------NAAAKDLGWTRRMNVIKGI 915
L ++H NIVK+ G C S R +L +I+ + + + + I
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGT 972
+ Y+ + +HRD++++N+L++ +N + DFG+ K L D
Sbjct: 142 CKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVI----KGKH-PRDFIXXXXXXXLNLNIA-- 1025
+ APE K + DV+SFGV+ E+ K K P +F+ I
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 1026 LDEML--DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
L E+L + RLP P + I + C + N RP+
Sbjct: 259 LIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 296
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 809 EIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKF-HSPLPGEMTFQQEFLNEVK 866
E IR DF D +G G V AE + ++VA+K L G+ + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK---EGSMENEIA 68
Query: 867 ALTEIRHRNIVKF---YGFCSHVRHSLAMI----LSNNAAAKDLGWTRR--MNVIKGISD 917
L +I+H NIV Y H+ + ++ L + K +T R +I + D
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLD 127
Query: 918 ALSYMHNDCFPPIVHRDISSKNVL---LDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG 974
A+ Y+H+ IVHRD+ +N+L LD D++ +SDFG++K P S T GT G
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YVAPE+ ++ D +S GV+A ++ G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 809 EIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKF-HSPLPGEMTFQQEFLNEVK 866
E IR DF D +G G V AE + ++VA+K L G+ + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK---EGSMENEIA 68
Query: 867 ALTEIRHRNIVKF---YGFCSHVRHSLAMI----LSNNAAAKDLGWTRR--MNVIKGISD 917
L +I+H NIV Y H+ + ++ L + K +T R +I + D
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLD 127
Query: 918 ALSYMHNDCFPPIVHRDISSKNVL---LDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG 974
A+ Y+H+ IVHRD+ +N+L LD D++ +SDFG++K P S T GT G
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YVAPE+ ++ D +S GV+A ++ G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 809 EIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKF-HSPLPGEMTFQQEFLNEVK 866
E IR DF D +G G V AE + ++VA+K L G+ + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK---EGSMENEIA 68
Query: 867 ALTEIRHRNIVKF---YGFCSHVRHSLAMI----LSNNAAAKDLGWTRR--MNVIKGISD 917
L +I+H NIV Y H+ + ++ L + K +T R +I + D
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLD 127
Query: 918 ALSYMHNDCFPPIVHRDISSKNVL---LDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG 974
A+ Y+H+ IVHRD+ +N+L LD D++ +SDFG++K P S T GT G
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YVAPE+ ++ D +S GV+A ++ G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,6-Difluorophenyl)-1h-1,
2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 29/204 (14%)
Query: 816 DFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQ-QEFLNEVKALTEIRH 873
D +H +G G G VY + VAVK E T + +EFL E + EI+H
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 87
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYM 922
N+V+ G C+ + ++ L + R N + IS A+ Y+
Sbjct: 88 PNLVQLLGVCT-LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPE 979
F +HRD++++N L+ ++ V+DFG+++ + D+ +T AG + APE
Sbjct: 147 EKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 201
Query: 980 -LAYTMKVTEKCDVYSFGVLALEV 1002
LAY + K DV++FGVL E+
Sbjct: 202 SLAYN-TFSIKSDVWAFGVLLWEI 224
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 24/214 (11%)
Query: 809 EIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKF-HSPLPGEMTFQQEFLNEVK 866
E IR DF D +G G V AE + ++VA+K L G+ + NE+
Sbjct: 14 EDIRDIYDFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK---EGSMENEIA 68
Query: 867 ALTEIRHRNIVKF---YGFCSHVRHSLAMI----LSNNAAAKDLGWTRR--MNVIKGISD 917
L +I+H NIV Y H+ + ++ L + K +T R +I + D
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLD 127
Query: 918 ALSYMHNDCFPPIVHRDISSKNVL---LDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG 974
A+ Y+H+ IVHRD+ +N+L LD D++ +SDFG++K P S T GT G
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPG 183
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YVAPE+ ++ D +S GV+A ++ G P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
Length = 298
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR 872
++ + + +GKG G V + +G+ AVK + T ++ L EV+ L ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 873 HRNIVKFYGFCSHVR--------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHN 924
H NI+K Y F ++ + + K +I+ + ++YMH
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 150
Query: 925 DCFPPIVHRDISSKNVLLDF---DNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ IVHRD+ +N+LL+ D + DFG++ + S + GT Y+APE+
Sbjct: 151 N---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEVL 206
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ EKCDV+S GV+ ++ G P
Sbjct: 207 HG-TYDEKCDVWSTGVILYILLSGCPP 232
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor A-
443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of 4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 66.6 bits (161), Expect = 8e-11, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDFD +GKG G V E A+G A+K + + E + L RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ +T G I AL Y+H+
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 129
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RDI +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 130 ---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
D + GV+ E++ G+ P F L I ++E+ PR +P
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFEL-ILMEEIRFPRTLSP 235
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 66.6 bits (161), Expect = 8e-11, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDFD +GKG G V E A+G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ +T G I AL Y+H+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RDI +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
D + GV+ E++ G+ P F L I ++E+ PR +P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFEL-ILMEEIRFPRTLSP 230
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Novel Bosutinib Isoform 1, Previously Thought To Be
Bosutinib
Length = 293
Score = 66.6 bits (161), Expect = 8e-11, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 124/268 (46%), Gaps = 35/268 (13%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G G VYKA+ +G + A K + E+ ++++ E++ L H IVK G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 75
Query: 882 FCSHVRHSLAMILSNNAAAKD---LGWTRRMN------VIKGISDALSYMHNDCFPPIVH 932
H MI A D L R + V + + +AL+++H+ I+H
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 933 RDISSKNVLLDFDNEAHVSDFGI-AKFLKPDSSNWTELAGTYGYVAPELAY--TMKVTE- 988
RD+ + NVL+ + + ++DFG+ AK LK GT ++APE+ TMK T
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 989 --KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
K D++S G+ +E+ + + P + L IA + P L TPS +
Sbjct: 192 DYKADIWSLGITLIEMAQIEPPHHELNPMRVL---LKIAKSD--PPTLLTPS----KWSV 242
Query: 1047 SIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ LD+NPE+RP+ +QLL+
Sbjct: 243 EFRDFLKIALDKNPETRPS---AAQLLE 267
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 8e-11, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 124/268 (46%), Gaps = 35/268 (13%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G G VYKA+ +G + A K + E+ ++++ E++ L H IVK G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 83
Query: 882 FCSHVRHSLAMILSNNAAAKD---LGWTRRMN------VIKGISDALSYMHNDCFPPIVH 932
H MI A D L R + V + + +AL+++H+ I+H
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 933 RDISSKNVLLDFDNEAHVSDFGI-AKFLKPDSSNWTELAGTYGYVAPELAY--TMKVTE- 988
RD+ + NVL+ + + ++DFG+ AK LK GT ++APE+ TMK T
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDTPY 199
Query: 989 --KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
K D++S G+ +E+ + + P + L IA + P L TPS +
Sbjct: 200 DYKADIWSLGITLIEMAQIEPPHHELNPMRVL---LKIAKSD--PPTLLTPS----KWSV 250
Query: 1047 SIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ LD+NPE+RP+ +QLL+
Sbjct: 251 EFRDFLKIALDKNPETRPS---AAQLLE 275
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With
Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 66.6 bits (161), Expect = 8e-11, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDFD +GKG G V E A+G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ +T G I AL Y+H+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RDI +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
D + GV+ E++ G+ P F L I ++E+ PR +P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFEL-ILMEEIRFPRTLSP 230
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.6 bits (161), Expect = 8e-11, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDFD +GKG G V E A+G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ +T G I AL Y+H+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RDI +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
D + GV+ E++ G+ P F L I ++E+ PR +P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFEL-ILMEEIRFPRTLSP 230
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 8e-11, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 857 FQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGWT 906
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 967 TELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 169 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDFD +GKG G V E A+G A+K + + E + L RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ +T G I AL Y+H+
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 127
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RDI +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 128 ---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
D + GV+ E++ G+ P F L I ++E+ PR +P
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFEL-ILMEEIRFPRTLSP 233
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDFD +GKG G V E A+G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ +T G I AL Y+H+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RDI +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
D + GV+ E++ G+ P F L I ++E+ PR +P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFEL-ILMEEIRFPRTLSP 230
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDFD +GKG G V E A+G A+K + + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ +T G I AL Y+H+
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RDI +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTP 1037
D + GV+ E++ G+ P F L I ++E+ PR +P
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLFEL-ILMEEIRFPRTLSP 230
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
Js30
Length = 316
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVK---KFHSPLPGEMTFQQEFLNEVKALTEI 871
DF +G+G +V A ELA+ A+K K H ++ + E ++ +
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY---VTRERDVMSRL 94
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG---------ISDALSYM 922
H VK Y FC L LS + L + R++ I AL Y+
Sbjct: 95 DHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGTYGYVAPEL 980
H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT YV+PEL
Sbjct: 154 HGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 981 AYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ D+++ G + +++ G P
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 857 FQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGWT 906
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 49 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---K 105
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D + +
Sbjct: 106 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 967 TELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 163 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 857 FQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGWT 906
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 61 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---K 117
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D + +
Sbjct: 118 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 967 TELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 175 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 857 FQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGWT 906
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 967 TELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 185 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 857 FQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGWT 906
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 71 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 967 TELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 185 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 857 FQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGWT 906
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 51 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---K 107
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D + +
Sbjct: 108 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 967 TELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 165 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 857 FQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGWT 906
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 55 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 967 TELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 169 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
Length = 341
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 823 IGKGGQGSVYKAE--LASGEIV--AVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G V + E SG+ V AVK + + +F+ EV A+ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 879 FYGFCSHVRHSLAMILSNNAAAKD----------LGWTRRMNVIKGISDALSYMHNDCFP 928
YG + L+ + D LG R V +++ + Y+ + F
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF- 136
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMK 985
+HRD++++N+LL + + DFG+ + L + ++ + + APE T
Sbjct: 137 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
+ D + FGV E+ G+ P +I L+ +D+ + RLP P QD
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH---KIDKEGE-RLPRPEDCPQD- 247
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLL 1073
I V + C PE RPT + L
Sbjct: 248 ---IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 823 IGKGGQGSVYKAE--LASGEIV--AVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G V + E SG+ V AVK + + +F+ EV A+ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 879 FYGFCSHVRHSLAMILSNNAAAKD----------LGWTRRMNVIKGISDALSYMHNDCFP 928
YG + L+ + D LG R V +++ + Y+ + F
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF- 136
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMK 985
+HRD++++N+LL + + DFG+ + L + ++ + + APE T
Sbjct: 137 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
+ D + FGV E+ G+ P +I L+ +D+ + RLP P QD
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH---KIDKEGE-RLPRPEDCPQD- 247
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLL 1073
I V + C PE RPT + L
Sbjct: 248 ---IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 823 IGKGGQGSVYKAE--LASGEIV--AVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G V + E SG+ V AVK + + +F+ EV A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 879 FYGFCSHVRHSLAMILSNNAAAKD----------LGWTRRMNVIKGISDALSYMHNDCFP 928
YG + L+ + D LG R V +++ + Y+ + F
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF- 132
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMK 985
+HRD++++N+LL + + DFG+ + L + ++ + + APE T
Sbjct: 133 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
+ D + FGV E+ G+ P +I L+ +D+ + RLP P QD
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH---KIDKEGE-RLPRPEDCPQD- 243
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLL 1073
I V + C PE RPT + L
Sbjct: 244 ---IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 823 IGKGGQGSVYKAE--LASGEIV--AVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G V + E SG+ V AVK + + +F+ EV A+ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 879 FYGFCSHVRHSLAMILSNNAAAKD----------LGWTRRMNVIKGISDALSYMHNDCFP 928
YG + L+ + D LG R V +++ + Y+ + F
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF- 142
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMK 985
+HRD++++N+LL + + DFG+ + L + ++ + + APE T
Sbjct: 143 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
+ D + FGV E+ G+ P +I L+ +D+ + RLP P QD
Sbjct: 201 FSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH---KIDKEGE-RLPRPEDCPQD- 253
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLL 1073
I V + C PE RPT + L
Sbjct: 254 ---IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 823 IGKGGQGSVYKAE--LASGEIV--AVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G V + E SG+ V AVK + + +F+ EV A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 879 FYGFCSHVRHSLAMILSNNAAAKD----------LGWTRRMNVIKGISDALSYMHNDCFP 928
YG + L+ + D LG R V +++ + Y+ + F
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF- 132
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMK 985
+HRD++++N+LL + + DFG+ + L + ++ + + APE T
Sbjct: 133 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
+ D + FGV E+ G+ P +I L+ +D+ + RLP P QD
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH---KIDKEGE-RLPRPEDCPQD- 243
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLL 1073
I V + C PE RPT + L
Sbjct: 244 ---IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 856 TFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGW 905
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD--- 469
Query: 906 TRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D +
Sbjct: 470 KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 526
Query: 966 WTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 527 YK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 45/248 (18%)
Query: 799 LTFEGKI----------VYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL-AS 838
L F+GK+ YEE RA F E IG G G V L
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 839 GE---IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895
G+ VA+K + +++FL+E + + H NI++ G + R LAMI++
Sbjct: 74 GQRDVPVAIKALKAGYTERQ--RRDFLSEASIMGQFDHPNIIRLEGVVT--RGRLAMIVT 129
Query: 896 NNAAAKDLGWTRR-----------MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF 944
L R + +++G+ + Y+ + + VHRD++++NVL+D
Sbjct: 130 EYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDS 186
Query: 945 DNEAHVSDFGIAKFLKPD-SSNWTELAGTYG--YVAPELAYTMKVTEKCDVYSFGVLALE 1001
+ VSDFG+++ L+ D + +T G + APE + DV+SFGV+ E
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 1002 VIK-GKHP 1008
V+ G+ P
Sbjct: 247 VLAYGERP 254
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 857 FQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGWT 906
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 69 LKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---K 125
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D + +
Sbjct: 126 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 967 TELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 183 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 856 TFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM----------ILSNNAAAKDLGW 905
+ E L E + ++ + IV+ G C L M L N KD
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD--- 468
Query: 906 TRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965
+ ++ +S + Y+ F VHRD++++NVLL + A +SDFG++K L+ D +
Sbjct: 469 KNIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525
Query: 966 WTELAGTYG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
+ A T+G + APE K + K DV+SFGVL E G+ P
Sbjct: 526 YK--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
F D +G+GG G V+ ++ A+G++ A KK + + Q + E K L ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 876 IVKF-YGFCSHVRHSLAMILSN---------NAAAKDLGWT--RRMNVIKGISDALSYMH 923
IV Y F + L M + N N + G+ R + I L ++H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
I++RD+ +NVLLD D +SD G+A LK + AGT G++APEL
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GV E+I + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVK---KFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G+VYK + GE V + K + G EF++E + + H ++V+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA-NVEFMDEALIMASMDHPHLVR 104
Query: 879 FYGFCSHVRHSLAMILSNNAA--------AKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
G C L L + ++G +N I+ + Y+ +
Sbjct: 105 LLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RL 161
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTE 988
VHRD++++NVL+ N ++DFG+A+ L+ D + G ++A E + K T
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 221
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDP--RLPTPSCIVQDKL 1045
+ DV+S+GV E++ G P D I + ++L+ RLP P
Sbjct: 222 QSDVWSYGVTIWELMTFGGKPYDGIPTR---------EIPDLLEKGERLPQPPICT---- 268
Query: 1046 ISIVEVAISCLDENPESRPTMPKVS 1070
I + V + C + +SRP +++
Sbjct: 269 IDVYMVMVKCWMIDADSRPKFKELA 293
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
F D +G+GG G V+ ++ A+G++ A KK + + Q + E K L ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 876 IVKF-YGFCSHVRHSLAMILSN---------NAAAKDLGWT--RRMNVIKGISDALSYMH 923
IV Y F + L M + N N + G+ R + I L ++H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
I++RD+ +NVLLD D +SD G+A LK + AGT G++APEL
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GV E+I + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVK---KFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G+VYK + GE V + K + G EF++E + + H ++V+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA-NVEFMDEALIMASMDHPHLVR 81
Query: 879 FYGFCSHVRHSLAMILSNNAA--------AKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
G C L L + ++G +N I+ + Y+ +
Sbjct: 82 LLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RL 138
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTE 988
VHRD++++NVL+ N ++DFG+A+ L+ D + G ++A E + K T
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 198
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDP--RLPTPSCIVQDKL 1045
+ DV+S+GV E++ G P D I + ++L+ RLP P
Sbjct: 199 QSDVWSYGVTIWELMTFGGKPYDGIPTR---------EIPDLLEKGERLPQPPICT---- 245
Query: 1046 ISIVEVAISCLDENPESRPTMPKVS 1070
I + V + C + +SRP +++
Sbjct: 246 IDVYMVMVKCWMIDADSRPKFKELA 270
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
F D +G+GG G V+ ++ A+G++ A KK + + Q + E K L ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 876 IVKF-YGFCSHVRHSLAMILSN---------NAAAKDLGWT--RRMNVIKGISDALSYMH 923
IV Y F + L M + N N + G+ R + I L ++H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
I++RD+ +NVLLD D +SD G+A LK + AGT G++APEL
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GV E+I + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
F D +G+GG G V+ ++ A+G++ A KK + + Q + E K L ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 876 IVKF-YGFCSHVRHSLAMILSN---------NAAAKDLGWT--RRMNVIKGISDALSYMH 923
IV Y F + L M + N N + G+ R + I L ++H
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
I++RD+ +NVLLD D +SD G+A LK + AGT G++APEL
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GV E+I + P
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 85
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 142
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYXQRTLREIKILLRFRHENII---G 89
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 146
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 85
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 142
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLAFRHENII---G 87
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 144
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ ++ + DFG+A+ PD + TE T Y APE+
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 45/248 (18%)
Query: 799 LTFEGKI----------VYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL-AS 838
L F+GK+ YEE RA F E IG G G V L
Sbjct: 14 LYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVP 73
Query: 839 GE---IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895
G+ VA+K + +++FL+E + + H NI++ G + R LAMI++
Sbjct: 74 GQRDVPVAIKALKAGYTERQ--RRDFLSEASIMGQFDHPNIIRLEGVVT--RGRLAMIVT 129
Query: 896 NNAAAKDLGWTRR-----------MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF 944
L R + +++G+ + Y+ + + VHRD++++NVL+D
Sbjct: 130 EYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDS 186
Query: 945 DNEAHVSDFGIAKFLKPDSSNWTELAG---TYGYVAPELAYTMKVTEKCDVYSFGVLALE 1001
+ VSDFG+++ L+ D G + APE + DV+SFGV+ E
Sbjct: 187 NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 1002 VIK-GKHP 1008
V+ G+ P
Sbjct: 247 VLAYGERP 254
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 85
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 142
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 814 TNDFDDEHCIGKGGQGSVY-KAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR 872
++ + + +GKG G V + +G+ AVK + T ++ L EV+ L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 873 HRNIVKFYGFCSHV--------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHN 924
H NI+K Y F ++ + + K +I+ + ++YMH
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 144
Query: 925 DCFPPIVHRDISSKNVLLD---FDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ IVHRD+ +N+LL+ D + DFG++ + S + GT Y+APE+
Sbjct: 145 N---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEVL 200
Query: 982 YTMKVTEKCDVYSFGVL 998
+ EKCDV+S GV+
Sbjct: 201 HGT-YDEKCDVWSTGVI 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 814 TNDFDDEHCIGKGGQGSVY-KAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR 872
++ + + +GKG G V + +G+ AVK + T ++ L EV+ L ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 873 HRNIVKFYGFCSHVR--------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHN 924
H NI+K Y F ++ + + K +I+ + ++YMH
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 167
Query: 925 DCFPPIVHRDISSKNVLLD---FDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ IVHRD+ +N+LL+ D + DFG++ + S + GT Y+APE+
Sbjct: 168 N---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEVL 223
Query: 982 YTMKVTEKCDVYSFGVL 998
+ EKCDV+S GV+
Sbjct: 224 HGT-YDEKCDVWSTGVI 239
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 42/297 (14%)
Query: 799 LTFEGKIVYEEIIRATNDFDDEHCIGKGGQGS---VYKAELASGEIVAVKKFHSPLPGEM 855
L F+ YE + R N D IG+ G G+ VYKA+ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 856 TFQQEFLNEVKALTEIRHRNIVK----FY---------GFCSHVRHSLAMILSNNAAAKD 902
++++ E+ L H NIVK FY FC+ M+ +
Sbjct: 78 L--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML----ELERP 131
Query: 903 LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962
L ++ V K DAL+Y+H++ I+HRD+ + N+L D + ++DFG++
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX 188
Query: 963 SSNWTELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFIXXXXX 1017
GT ++APE+ + K DV+S G+ +E+ + + P +
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Query: 1018 XXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
L IA E P L PS + + CL++N ++R T SQLL+
Sbjct: 249 L---LKIAKSE--PPTLAQPSRWSSN----FKDFLKKCLEKNVDARWT---TSQLLQ 293
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 811 IRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALT 869
+RA + D +G G G+V A + +G VA+KK + P E+ F + E++ L
Sbjct: 23 VRAV--YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-FAKRAYRELRLLK 79
Query: 870 EIRHRNIV----------------KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK 913
+RH N++ FY + L ++ + LG R ++
Sbjct: 80 HMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK----LGEDRIQFLVY 135
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-- 971
+ L Y+H I+HRD+ N+ ++ D E + DFG+A+ + DS E+ G
Sbjct: 136 QMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADS----EMXGXV 186
Query: 972 -TYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 1006
T Y APE+ M+ T+ D++S G + E+I GK
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 807 YEEIIRATNDFDDEHCIGKGGQ-GSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEV 865
YE + R N D IG+ G G VYKA+ ++A K E ++++ E+
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEI 58
Query: 866 KALTEIRHRNIVK----FY---------GFCSHVRHSLAMILSNNAAAKDLGWTRRMNVI 912
L H NIVK FY FC+ M+ + L ++ V
Sbjct: 59 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML----ELERPLTESQIQVVC 114
Query: 913 KGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGI-AKFLKPDSSNWTELAG 971
K DAL+Y+H++ I+HRD+ + N+L D + ++DFG+ AK + G
Sbjct: 115 KQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIG 171
Query: 972 TYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIAL 1026
T ++APE+ + K DV+S G+ +E+ + + P + L IA
Sbjct: 172 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL---LKIAK 228
Query: 1027 DEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
E P L PS + + CL++N ++R T SQLL+
Sbjct: 229 SE--PPTLAQPSRWSSN----FKDFLKKCLEKNVDARWT---TSQLLQ 267
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 42/297 (14%)
Query: 799 LTFEGKIVYEEIIRATNDFDDEHCIGKGGQGS---VYKAELASGEIVAVKKFHSPLPGEM 855
L F+ YE + R N D IG+ G G+ VYKA+ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 856 TFQQEFLNEVKALTEIRHRNIVK----FY---------GFCSHVRHSLAMILSNNAAAKD 902
++++ E+ L H NIVK FY FC+ M+ +
Sbjct: 78 L--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML----ELERP 131
Query: 903 LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962
L ++ V K DAL+Y+H++ I+HRD+ + N+L D + ++DFG++
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 188
Query: 963 SSNWTELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFIXXXXX 1017
GT ++APE+ + K DV+S G+ +E+ + + P +
Sbjct: 189 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Query: 1018 XXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
L IA E P L PS + + CL++N ++R T SQLL+
Sbjct: 249 L---LKIAKSE--PPTLAQPSRWSSN----FKDFLKKCLEKNVDARWT---TSQLLQ 293
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 93
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 94 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 150
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 85
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 142
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 85
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 142
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 985 K-VTEKCDVYSFGVLALEVIKGK 1006
K T+ D++S G + E++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 977
AL Y+ N I+HRD+ N+LLD H++DF IA L P + T +AGT Y+A
Sbjct: 127 ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMA 182
Query: 978 PELAYTMK---VTEKCDVYSFGVLALEVIKGKHP 1008
PE+ + K + D +S GV A E+++G+ P
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 814 TNDFDDEHCIGKGGQGSVY-KAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR 872
++ + + +GKG G V + +G+ AVK + T ++ L EV+ L ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 873 HRNIVKFYGFCSHVR--------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHN 924
H NI+K Y F ++ + + K +I+ + ++YMH
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 168
Query: 925 DCFPPIVHRDISSKNVLLD---FDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ IVHRD+ +N+LL+ D + DFG++ + S + GT Y+APE+
Sbjct: 169 N---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEVL 224
Query: 982 YTMKVTEKCDVYSFGVL 998
+ EKCDV+S GV+
Sbjct: 225 HGT-YDEKCDVWSTGVI 240
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 135/300 (45%), Gaps = 42/300 (14%)
Query: 800 TFEGKIVYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAVKK 846
TF YE+ + ++F E +G G G V L + EI VA+K
Sbjct: 21 TFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 847 FHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAA 899
+ +++FL E + + H NI++ G + + + + L +
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 900 AKDLGWT--RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
D +T + + +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+++
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 958 FLKPD-SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIX 1013
L+ D + +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----- 250
Query: 1014 XXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
++ A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 251 YWEMSNQDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 105
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 106 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 162
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 87
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 144
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 985 K-VTEKCDVYSFGVLALEVIKGK 1006
K T+ D++S G + E++ +
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 3e-10, Method: Composition-based stats.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 42/297 (14%)
Query: 799 LTFEGKIVYEEIIRATNDFDDEHCIGKGGQGS---VYKAELASGEIVAVKKFHSPLPGEM 855
L F+ YE + R N D IG+ G G+ VYKA+ ++A K E
Sbjct: 18 LYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE 77
Query: 856 TFQQEFLNEVKALTEIRHRNIVK----FY---------GFCSHVRHSLAMILSNNAAAKD 902
++++ E+ L H NIVK FY FC+ M+ +
Sbjct: 78 L--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML----ELERP 131
Query: 903 LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962
L ++ V K DAL+Y+H++ I+HRD+ + N+L D + ++DFG++
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX 188
Query: 963 SSNWTELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFIXXXXX 1017
GT ++APE+ + K DV+S G+ +E+ + + P +
Sbjct: 189 IQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Query: 1018 XXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
L IA E P L PS + + CL++N ++R T SQLL+
Sbjct: 249 L---LKIAKSE--PPTLAQPSRWSSN----FKDFLKKCLEKNVDARWT---TSQLLQ 293
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 135/300 (45%), Gaps = 42/300 (14%)
Query: 800 TFEGKIVYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAVKK 846
TF +E+ + ++F E +G G G V L + EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 847 FHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAA 899
+ +++FL E + + H NI++ G + + + + L +
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 900 AKDLGWT--RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
D +T + + +++GI+ + Y+ + F VHRD++++N+L++ + VSDFG+++
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGF---VHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 958 FLKPD-SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIX 1013
L+ D + +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----- 250
Query: 1014 XXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
++ A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 251 YWEMSNQDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf
12058
Length = 285
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 49/279 (17%)
Query: 820 EHCIGKGGQGSVYKAEL---ASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
E IG G G V L EI VA+K + + +++FL+E + + H N
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--RRDFLSEASIMGQFDHPN 70
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYMHN 924
I+ G + + MI++ L R N +++GI + Y+ +
Sbjct: 71 IIHLEGVVTKCKP--VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 128
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-SSNWTELAGTYG--YVAPELA 981
+ VHRD++++N+L++ + VSDFG+++ L+ D + +T G + APE
Sbjct: 129 MSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 982 YTMKVTEKCDVYSFGVLALEVIK-GKHP------RDFIXXXXXXXLNLNIALDEMLDPRL 1034
K T DV+S+G++ EV+ G+ P +D I A++E RL
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK-----------AIEEGY--RL 232
Query: 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P P D I++ ++ + C + RP ++ +L
Sbjct: 233 PPP----MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 49/279 (17%)
Query: 820 EHCIGKGGQGSVYKAEL---ASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
E IG G G V L EI VA+K + + +++FL+E + + H N
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ--RRDFLSEASIMGQFDHPN 76
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-----------VIKGISDALSYMHN 924
I+ G + + MI++ L R N +++GI + Y+ +
Sbjct: 77 IIHLEGVVTKCKP--VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 134
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-SSNWTELAGTYG--YVAPELA 981
+ VHRD++++N+L++ + VSDFG+++ L+ D + +T G + APE
Sbjct: 135 MSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 982 YTMKVTEKCDVYSFGVLALEVIK-GKHP------RDFIXXXXXXXLNLNIALDEMLDPRL 1034
K T DV+S+G++ EV+ G+ P +D I A++E RL
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK-----------AIEEGY--RL 238
Query: 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P P D I++ ++ + C + RP ++ +L
Sbjct: 239 PPP----MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 89
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 146
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 135/300 (45%), Gaps = 42/300 (14%)
Query: 800 TFEGKIVYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAVKK 846
TF +E+ + ++F E +G G G V L + EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 847 FHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAA 899
+ +++FL E + + H NI++ G + + + + L +
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 900 AKDLGWT--RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
D +T + + +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+A+
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLAR 195
Query: 958 FLKPD-SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIX 1013
L+ D + +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----- 250
Query: 1014 XXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
++ A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 251 YWEMSNQDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs
Length = 301
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 43/273 (15%)
Query: 815 NDFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V+K + SG ++A K H L + + + + E++ L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 66
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM----------NVIKGISDALSY 921
IV FYG F S S+ M + + + L R+ VIKG L+Y
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTY 122
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ I+HRD+ N+L++ E + DFG++ L + +N E GT Y++PE
Sbjct: 123 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPERL 178
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLD-----PRLPT 1036
+ + D++S G+ +E+ G++PR +A+ E+LD P
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGRYPRP------------PMAIFELLDYIVNEPPPKL 226
Query: 1037 PSCIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
PS + + V CL +NP R + ++
Sbjct: 227 PSAVFSLEFQDFVN---KCLIKNPAERADLKQL 256
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 89
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS--- 146
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLAFRHENII---G 87
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 144
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 83
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 140
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 985 K-VTEKCDVYSFGVLALEVIKGK 1006
K T+ D++S G + E++ +
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 90
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 147
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 91
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 92 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 148
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 82
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 83 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 139
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 89
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 146
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 33/269 (12%)
Query: 823 IGKGGQGSVYKAE--LASGEIV--AVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G V + E SG+ V AVK + + +F+ EV A+ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 879 FYGFCSHVRHSLAMILSNNAAAKD----------LGWTRRMNVIKGISDALSYMHNDCFP 928
YG + L+ + D LG R V +++ + Y+ + F
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF- 142
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMK 985
+HRD++++N+LL + + DFG+ + L + + + + APE T
Sbjct: 143 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 200
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
+ D + FGV E+ G+ P +I L+ +D+ + RLP P QD
Sbjct: 201 FSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH---KIDKEGE-RLPRPEDCPQD- 253
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLL 1073
I V + C PE RPT + L
Sbjct: 254 ---IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 33/269 (12%)
Query: 823 IGKGGQGSVYKAE--LASGEIV--AVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G V + E SG+ V AVK + + +F+ EV A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 879 FYGFCSHVRHSLAMILSNNAAAKD----------LGWTRRMNVIKGISDALSYMHNDCFP 928
YG + L+ + D LG R V +++ + Y+ + F
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF- 132
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAYTMK 985
+HRD++++N+LL + + DFG+ + L + + + + APE T
Sbjct: 133 --IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 190
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
+ D + FGV E+ G+ P +I L+ +D+ + RLP P QD
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILH---KIDKEGE-RLPRPEDCPQD- 243
Query: 1045 LISIVEVAISCLDENPESRPTMPKVSQLL 1073
I V + C PE RPT + L
Sbjct: 244 ---IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 97/236 (41%), Gaps = 55/236 (23%)
Query: 811 IRATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALT 869
+R +DF++ +G+G G V KA A A+KK T L+EV L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVXLLA 57
Query: 870 EIRHRNIVKFYG--------------------------FCSHVRHSLAMILSNNA-AAKD 902
+ H+ +V++Y +C + R +I S N +D
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCEN-RTLYDLIHSENLNQQRD 116
Query: 903 LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK----- 957
W + + I +ALSY+H+ I+HR++ N+ +D + DFG+AK
Sbjct: 117 EYW----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 958 --FLKPDSS-------NWTELAGTYGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI 1003
LK DS N T GT YVA E L T EK D YS G++ E I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 977
AL Y+H+ I++RD+ +N+LLD + ++DFG AK++ PD + L GT Y+A
Sbjct: 118 ALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLCGTPDYIA 171
Query: 978 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
PE+ T + D +SFG+L E++ G P
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 83
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 140
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 43/237 (18%)
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVR-----------HSLAMILSNNAAAKDLGWT 906
+++FL E + + H NI+ G + + SL L N +
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--I 124
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-SSN 965
+ + +++GIS + Y+ + + VHRD++++N+L++ + VSDFG+++ L+ D +
Sbjct: 125 QLVGMLRGISAGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 181
Query: 966 WTELAGTYG--YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP------RDFIXXXX 1016
+T G + APE K T DV+S+G++ EV+ G+ P +D I
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIK--- 238
Query: 1017 XXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
A++E RLP+P D ++ ++ + C + SRP ++ +L
Sbjct: 239 --------AVEEGY--RLPSP----MDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +GKG G+VY A E S IVA+K + + + E++ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 874 RNIVKFYGFCSHVRHSLAMILS---NNAAAKDLGWT------RRMNVIKGISDALSYMHN 924
NI++ Y + + R + +IL K+L + R +++ ++DAL Y H
Sbjct: 83 PNILRLYNYF-YDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
++HRDI +N+LL E ++DFG + + S + GT Y+ PE+
Sbjct: 142 K---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 985 KVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
EK D++ GVL E++ G P F + +D +PT + QD
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPP--FESASHNETYRRIVKVDLKFPASVPTGA---QD- 250
Query: 1045 LISIVEVAISCLDENPESRPTMPKVS 1070
LIS L NP R + +VS
Sbjct: 251 LIS------KLLRHNPSERLPLAQVS 270
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 58/310 (18%)
Query: 798 VLTFEGKIVYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAV 844
V TF +E+ +A +F E IG G G V L EI VA+
Sbjct: 3 VRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAI 62
Query: 845 KKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLG 904
K + + +++FL+E + + H NI+ G + + MI++ L
Sbjct: 63 KTLKAGYTDKQ--RRDFLSEASIMGQFDHPNIIHLEGVVTKCKP--VMIITEYMENGSLD 118
Query: 905 WTRRMN-----------VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953
R N +++GI + Y+ + VHRD++++N+L++ + VSDF
Sbjct: 119 AFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDF 175
Query: 954 GIAKFLKPD-SSNWTELAGTYG--YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP- 1008
G+++ L+ D + +T G + APE K T DV+S+G++ EV+ G+ P
Sbjct: 176 GMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
Query: 1009 -----RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESR 1063
+D I A++E RLP P D I++ ++ + C + R
Sbjct: 236 WDMSNQDVIK-----------AIEEGY--RLPPP----MDCPIALHQLMLDCWQKERSDR 278
Query: 1064 PTMPKVSQLL 1073
P ++ +L
Sbjct: 279 PKFGQIVNML 288
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL ++ D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Phosphorylated,
Amp-pnp Bound
Length = 373
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 806 VYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAVKKFHSPLP 852
YE+ + ++F E +G G G V L + EI VA+K
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 853 GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAAAKDLGW 905
+ +++FL E + + H NI++ G + + + + L + D +
Sbjct: 87 EKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 144
Query: 906 T--RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD- 962
T + + +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+++ L+ D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 963 SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXX 1019
+ +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSN 256
Query: 1020 LNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
++ A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 257 QDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 806 VYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAVKKFHSPLP 852
YE+ + ++F E +G G G V L + EI VA+K
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 853 GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAAAKDLGW 905
+ +++FL E + + H NI++ G + + + + L + D +
Sbjct: 87 EKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF 144
Query: 906 T--RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD- 962
T + + +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+++ L+ D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 963 SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXX 1019
+ +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSN 256
Query: 1020 LNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
++ A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 257 QDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 806 VYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAVKKFHSPLP 852
YE+ + ++F E +G G G V L + EI VA+K
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 853 GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAAAKDLGW 905
+ +++FL E + + H NI++ G + + + + L + D +
Sbjct: 85 EKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 142
Query: 906 T--RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD- 962
T + + +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+++ L+ D
Sbjct: 143 TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 199
Query: 963 SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXX 1019
+ +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 200 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSN 254
Query: 1020 LNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
++ A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 255 QDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii-
38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 126/271 (46%), Gaps = 33/271 (12%)
Query: 820 EHCIGKGGQGSVYKAEL---ASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+ +G G G V L + EI VA+K + +++FL E + + H N
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--RRDFLGEASIMGQFDHPN 95
Query: 876 IVKFYGFCSHVRHSLAMI-------LSNNAAAKDLGWT--RRMNVIKGISDALSYMHNDC 926
I++ G + + + + L + D +T + + +++GI+ + Y+ +
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 155
Query: 927 FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-SSNWTELAGT--YGYVAPELAYT 983
+ VHRD++++N+L++ + VSDFG+++ L+ D + +T G + +PE
Sbjct: 156 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 984 MKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQ 1042
K T DV+S+G++ EV+ G+ P ++ A+DE RLP P
Sbjct: 213 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 261
Query: 1043 DKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
D ++ ++ + C ++ +RP ++ +L
Sbjct: 262 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 812 RATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTE 870
++ +++ +G+G G V K +G IVA+KKF +M ++ + E+K L +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV-KKIAMREIKLLKQ 80
Query: 871 IRHRNIVKFYGFCSH----------VRHSLA--MILSNNAAAKDLGWTRRMNVIKGISDA 918
+RH N+V C V H++ + L N + +I GI
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI--G 138
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAP 978
+ HN I+HRDI +N+L+ + DFG A+ L + + T Y AP
Sbjct: 139 FCHSHN-----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 979 ELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
EL +K + DV++ G L E+ G+
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation
At Position 52
Length = 364
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA++K SP + T+ Q L E+K L RH NI+ G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 89
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 146
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 135/300 (45%), Gaps = 42/300 (14%)
Query: 800 TFEGKIVYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAVKK 846
TF +E+ + ++F E +G G G V L + EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 847 FHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAA 899
+ +++FL E + + H NI++ G + + + + L +
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 900 AKDLGWT--RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
D +T + + +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+++
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 958 FLKPD-SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIX 1013
L+ D + +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----- 250
Query: 1014 XXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
++ A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 251 YWEMSNQDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 126/271 (46%), Gaps = 33/271 (12%)
Query: 820 EHCIGKGGQGSVYKAEL---ASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+ +G G G V L + EI VA+K + +++FL E + + H N
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ--RRDFLGEASIMGQFDHPN 107
Query: 876 IVKFYGFCSHVRHSLAMI-------LSNNAAAKDLGWT--RRMNVIKGISDALSYMHNDC 926
I++ G + + + + L + D +T + + +++GI+ + Y+ +
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 927 FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-SSNWTELAGT--YGYVAPELAYT 983
+ VHRD++++N+L++ + VSDFG+++ L+ D + +T G + +PE
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 984 MKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQ 1042
K T DV+S+G++ EV+ G+ P ++ A+DE RLP P
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERP-----YWEMSNQDVIKAVDEGY--RLPPP----M 273
Query: 1043 DKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
D ++ ++ + C ++ +RP ++ +L
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 9e-10, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 817 FDDEHCIGKGGQGSVYKAE-LASGEIVAVKKF-HSPLPGEMTFQQEFLNEVKALTEIRHR 874
F+ + +G G V AE A+G++ AVK L G+ + NE+ L +I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGK---ESSIENEIAVLRKIKHE 80
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDL-----GWTRR--MNVIKGISDALSYMHNDC 926
NIV H L M L + D +T + +I+ + DA+ Y+H
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR-- 138
Query: 927 FPPIVHRDISSKNVLL---DFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
IVHRD+ +N+L D +++ +SDFG++K ++ + GT GYVAPE+
Sbjct: 139 -MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
++ D +S GV+A ++ G P
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g
Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 134/300 (44%), Gaps = 42/300 (14%)
Query: 800 TFEGKIVYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAVKK 846
TF +E+ + ++F E +G G G V L + EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 847 FHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAA 899
+ +++FL E + + H NI++ G + + + + L +
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 900 AKDLGWT--RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
D +T + + +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGR 195
Query: 958 FLKPD-SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIX 1013
L+ D + +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----- 250
Query: 1014 XXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
++ A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 251 YWEMSNQDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 62/293 (21%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTE-IRHRNIVK 878
E +G G G+V G VAVK+ + F L E+K LTE H N+++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIR 73
Query: 879 FYGFCSHVRHSL-------------AMILSNNAAAKDLGWTRRMN---VIKGISDALSYM 922
+Y CS ++ S N + ++L + N +++ I+ ++++
Sbjct: 74 YY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 923 HNDCFPPIVHRDISSKNVLLD----FDNEAH---------VSDFGIAKFLKPDSS----N 965
H+ I+HRD+ +N+L+ F + +SDFG+ K L S N
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 966 WTELAGTYGYVAPE-------LAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXX 1017
+GT G+ APE L ++T D++S G + ++ KGKHP
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248
Query: 1018 XXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAIS-CLDENPESRPTMPKV 1069
+ +LDEM C+ LI+ IS +D +P RPT KV
Sbjct: 249 NIIRGIFSLDEM--------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 43/237 (18%)
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRR--------- 908
+++FL E + + H NI++ G + + MI++ L R
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 118
Query: 909 --MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-SSN 965
+ +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+++ L+ D +
Sbjct: 119 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 966 WTELAGTYG--YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP------RDFIXXXX 1016
+T G + +PE K T DV+S+G++ EV+ G+ P +D I
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK--- 232
Query: 1017 XXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 233 --------AVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 112/235 (47%), Gaps = 39/235 (16%)
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAAAKDLGWT--RR 908
+++FL E + + H NI++ G + + + + L + D +T +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 120
Query: 909 MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-SSNWT 967
+ +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+++ L+ D + +T
Sbjct: 121 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 968 ELAGTYG--YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP------RDFIXXXXXX 1018
G + +PE K T DV+S+G++ EV+ G+ P +D I
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK----- 232
Query: 1019 XLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 233 ------AVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 162 PPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLAT 221
P + L L TLHL L + P F L +L L L N + +L NL
Sbjct: 97 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 156
Query: 222 LYLHNNSLFDSIPSE-LGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGS 280
L+LH N + S+P L SL L L N+++ PH+ +L L TLYL+ N+LS +
Sbjct: 157 LFLHGNRI-SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-A 214
Query: 281 IPSE-FGNLRSLSMLNLGYN 299
+P+E LR+L L L N
Sbjct: 215 LPTEALAPLRALQYLRLNDN 234
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 170 NLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSI-PHSLGNLTNLATLYLHNNS 228
NL L L+ N L+ + F L L L L N S+ P + L L TL+L
Sbjct: 56 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 115
Query: 229 LFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNL 288
L + P L +L L L N L + +L NL L+L+ N +S F L
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 175
Query: 289 RSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSE 332
SL L L N++ + PH+ +L L TLY+ N+LS ++P+E
Sbjct: 176 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTE 218
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 362 NLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYN-KLSGSIPHSLGNLTNLATLDLYDNS 420
NL L+L+SN L + L L L L N +L P + L L TL L
Sbjct: 56 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 115
Query: 421 LSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNL 480
L P F L +L L L N L + +L NL L+L+ N +S L
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 175
Query: 481 RSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSE-LGNLRSLSMLSFAYN 539
S+ L L+ N+++ P + +L L+ LYL+ N+L ++P+E L LR+L L N
Sbjct: 176 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL-SALPTEALAPLRALQYLRLNDN 234
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 270 LYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSI 329
++L+ N +S + F R+L++L L N L I + L L L + +N+ S+
Sbjct: 36 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 95
Query: 330 PSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSM 389
P + L L TL+L L + P L +L
Sbjct: 96 D-----------------------PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQY 132
Query: 390 LSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSI 449
L L N L + +L NL L L+ N +S F L SL L L N+++
Sbjct: 133 LYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 192
Query: 450 PHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNN 491
PH+ +L L LYL+ N+LS + LR++ L LN+N
Sbjct: 193 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 37.7 bits (86), Expect = 0.031, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 75/189 (39%), Gaps = 22/189 (11%)
Query: 488 LNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPH 547
L+ N++S S NL IL+L++N L + L L L + N
Sbjct: 38 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA------- 90
Query: 548 SLGVLDLSSNHIVGEIPT---------ELGK-----LNFLIKLILAQNQLSGQLSPKLGS 593
L +D ++ H +G + T ELG L L L L N L
Sbjct: 91 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 150
Query: 594 LAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHN 653
L L HL L NR+S+ ++F L L L L N+ + P +L L L L N
Sbjct: 151 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 210
Query: 654 FLREAIPSQ 662
L A+P++
Sbjct: 211 NL-SALPTE 218
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 162 PPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLAT 221
P + L L TLHL L + P F L +L L L N + +L NL
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157
Query: 222 LYLHNNSLFDSIPSE-LGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGS 280
L+LH N + S+P L SL L L N+++ PH+ +L L TLYL+ N+LS +
Sbjct: 158 LFLHGNRI-SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-A 215
Query: 281 IPSE-FGNLRSLSMLNLGYN 299
+P+E LR+L L L N
Sbjct: 216 LPTEALAPLRALQYLRLNDN 235
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 170 NLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSI-PHSLGNLTNLATLYLHNNS 228
NL L L+ N L+ + F L L L L N S+ P + L L TL+L
Sbjct: 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 116
Query: 229 LFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNL 288
L + P L +L L L N L + +L NL L+L+ N +S F L
Sbjct: 117 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 176
Query: 289 RSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSE 332
SL L L N++ + PH+ +L L TLY+ N+LS ++P+E
Sbjct: 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTE 219
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 362 NLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYN-KLSGSIPHSLGNLTNLATLDLYDNS 420
NL L+L+SN L + L L L L N +L P + L L TL L
Sbjct: 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 116
Query: 421 LSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNL 480
L P F L +L L L N L + +L NL L+L+ N +S L
Sbjct: 117 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 176
Query: 481 RSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSE-LGNLRSLSMLSFAYN 539
S+ L L+ N+++ P + +L L+ LYL+ N+L ++P+E L LR+L L N
Sbjct: 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL-SALPTEALAPLRALQYLRLNDN 235
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 270 LYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSI 329
++L+ N +S + F R+L++L L N L I + L L L + +N+ S+
Sbjct: 37 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96
Query: 330 PSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSM 389
P + L L TL+L L + P L +L
Sbjct: 97 D-----------------------PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQY 133
Query: 390 LSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSI 449
L L N L + +L NL L L+ N +S F L SL L L N+++
Sbjct: 134 LYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 193
Query: 450 PHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNN 491
PH+ +L L LYL+ N+LS + LR++ L LN+N
Sbjct: 194 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 37.7 bits (86), Expect = 0.031, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 75/189 (39%), Gaps = 22/189 (11%)
Query: 488 LNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPH 547
L+ N++S S NL IL+L++N L + L L L + N
Sbjct: 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA------- 91
Query: 548 SLGVLDLSSNHIVGEIPT---------ELGK-----LNFLIKLILAQNQLSGQLSPKLGS 593
L +D ++ H +G + T ELG L L L L N L
Sbjct: 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 594 LAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHN 653
L L HL L NR+S+ ++F L L L L N+ + P +L L L L N
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 654 FLREAIPSQ 662
L A+P++
Sbjct: 212 NL-SALPTE 219
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase-
1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine
Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTE-IRHRNIVK 878
E +G G G+V G VAVK+ + F L E+K LTE H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIR 91
Query: 879 FYGFCSHVRHSL-------------AMILSNNAAAKDLGWTRRMN---VIKGISDALSYM 922
+Y CS ++ S N + ++L + N +++ I+ ++++
Sbjct: 92 YY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 923 HNDCFPPIVHRDISSKNVLLD----FDNEAH---------VSDFGIAKFLKPDS----SN 965
H+ I+HRD+ +N+L+ F + +SDFG+ K L N
Sbjct: 150 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 966 WTELAGTYGYVAPEL---AYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXXXXLN 1021
+GT G+ APEL + ++T D++S G + ++ KGKHP +
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 266
Query: 1022 LNIALDEMLDPRLPTPSCIVQDKLISIVEVAIS-CLDENPESRPTMPKV 1069
+LDEM C+ LI+ IS +D +P RPT KV
Sbjct: 267 GIFSLDEM--------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
Length = 448
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 58/289 (20%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTE-IRHRNIVK 878
E +G G G+V G VAVK+ + F L E+K LTE H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIR 91
Query: 879 FYGFCSHVRHSL-------------AMILSNNAAAKDLGWTRRMN---VIKGISDALSYM 922
+Y CS ++ S N + ++L + N +++ I+ ++++
Sbjct: 92 YY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 923 HNDCFPPIVHRDISSKNVLLD----FDNEAH---------VSDFGIAKFLKPDS----SN 965
H+ I+HRD+ +N+L+ F + +SDFG+ K L N
Sbjct: 150 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 966 WTELAGTYGYVAPEL---AYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXXXXLN 1021
+GT G+ APEL + ++T D++S G + ++ KGKHP +
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 266
Query: 1022 LNIALDEMLDPRLPTPSCIVQDKLISIVEVAIS-CLDENPESRPTMPKV 1069
+LDEM C+ LI+ IS +D +P RPT KV
Sbjct: 267 GIFSLDEM--------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 31/266 (11%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
E +G G G V+ A VAVK PG M+ + FL E + ++H +VK
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA-FLAEANVMKTLQHDKLVKL 75
Query: 880 YGFCSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ + + SL L ++ +K + ++ I++ ++++ +
Sbjct: 76 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY-- 132
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTE 988
+HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T
Sbjct: 133 -IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
K DV+SFG+L +E++ G+ P + AL+ R+P P ++
Sbjct: 192 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-----ALERGY--RMPRPENCPEE---- 240
Query: 1048 IVEVAISCLDENPESRPTMPKVSQLL 1073
+ + + C PE RPT + +L
Sbjct: 241 LYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 821 HCIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
CIG+G G V++ S E VA+K + + +++FL E + + H +I
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 453
Query: 877 VKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFP 928
VK G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 454 VKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF- 512
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKV 986
VHRDI+++NVL+ ++ + DFG++++++ DS+ + G ++APE +
Sbjct: 513 --VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 987 TEKCDVYSFGVLALEVI 1003
T DV+ FGV E++
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide Complex
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 116 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ucn-01
Length = 310
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 118 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-8
Length = 289
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 119 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 117 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 123 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 144 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 138 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 142 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In
Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 141 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGT 972
I AL Y+H I+HRD+ +N+LL+ D ++DFG AK L P+S + GT
Sbjct: 139 IVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
YV+PEL + D+++ G + +++ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 35/261 (13%)
Query: 837 ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCS-HVRHSLAMI-- 893
+GE+VAVK + + + + E+ L + H +I+K+ G C SL ++
Sbjct: 41 GTGEMVAVKALKADCGPQ--HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 894 ------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE 947
L + +G + + + I + ++Y+H+ + +HR+++++NVLLD D
Sbjct: 99 YVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLDNDRL 155
Query: 948 AHVSDFGIAKFLKPDSSNWTEL-----AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+ DFG+AK + P+ + + + + Y APE K DV+SFGV E+
Sbjct: 156 VKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 213
Query: 1003 I-----KGKHPRDFIXXXXXXXLNLNI-ALDEMLD--PRLPTPSCIVQDKL-ISIVEVAI 1053
+ P F+ + + L E+L+ RLP P DK + +
Sbjct: 214 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP-----DKCPCEVYHLMK 268
Query: 1054 SCLDENPESRPTMPKVSQLLK 1074
+C + RPT + +LK
Sbjct: 269 NCWETEASFRPTFENLIPILK 289
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 62/292 (21%), Positives = 127/292 (43%), Gaps = 67/292 (22%)
Query: 823 IGKGGQGSVYKAEL------ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G V+ AE +VAVK +++F E + LT ++H +I
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---ASDNARKDFHREAELLTNLQHEHI 77
Query: 877 VKFYGFC----------SHVRHS-----------LAMILSNNAAAKDLGWTRRMNVIKGI 915
VKFYG C +++H A++++ +L ++ +++ + I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG---- 971
+ + Y+ + F VHRD++++N L+ + + DFG+++ + S+++ + G
Sbjct: 138 AAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSRDVY--STDYYRVGGHTML 192
Query: 972 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEML 1030
++ PE K T + DV+S GV+ E+ GK P ++ +E++
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW------------YQLSNNEVI 240
Query: 1031 DPRLPTPSCIVQDKLIS--------IVEVAISCLDENPESRPTMPKVSQLLK 1074
+ CI Q +++ + E+ + C P R + + LL+
Sbjct: 241 E-------CITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 89
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 146
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + E T Y APE+
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 821 HCIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
CIG+G G V++ S E VA+K + + +++FL E + + H +I
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHI 453
Query: 877 VKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFP 928
VK G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 454 VKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF- 512
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT--YGYVAPELAYTMKV 986
VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE +
Sbjct: 513 --VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 987 TEKCDVYSFGVLALEVI 1003
T DV+ FGV E++
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+ G
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENII---G 90
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--------------GISDALSYMHNDCF 927
+R + + +DL T ++K I L Y+H+
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 147
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+LL+ + + DFG+A+ PD + E T Y APE+
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking
Partner
Length = 380
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 222
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 223 TVDIWSVGCIMAELLTGR 240
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
Query: 355 PSLGY--LSNLATLYLYSNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNL 411
PS + L+ L LYL N L ++P+ + L++L L + NKL L NL
Sbjct: 53 PSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNL 111
Query: 412 ATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSL-GNLTNLDALYLYDNSLS 470
A L L N L P F +L L+ LSLGYN+L S+P + LT+L L LY+N L
Sbjct: 112 AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLK 170
Query: 471 GSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNN 515
G L + L L+NN+L + +L L +L L N
Sbjct: 171 RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+ L L+L DN L F L++L L + NK L NLA L L N
Sbjct: 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATLYLYENSLSGSIPSEFG 286
L P +L L+ LSLGYN+L S+P + LT+L L LY N L F
Sbjct: 120 QLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFD 178
Query: 287 NLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNN 323
L L L L N+L + + +L L L + N
Sbjct: 179 KLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 198 LSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGS 256
L L NK S + LT L LYL++N L ++P+ + L++L L + NKL
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 257 IPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLA 316
L NLA L L N L P F +L L+ L+LGYN+L + LT+L
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK 160
Query: 317 TLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYSNSLFDS 376
L ++NN L +P + L+ L TL L +N L
Sbjct: 161 ELRLYNNQLK-RVPE-----------------------GAFDKLTELKTLKLDNNQLKRV 196
Query: 377 IPSELGNLRSLSMLSLGYN 395
+L L ML L N
Sbjct: 197 PEGAFDSLEKLKMLQLQEN 215
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 87/233 (37%), Gaps = 50/233 (21%)
Query: 246 LSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGII 305
L L NKLS + LT L LYL +N L F L++L L + NKL +
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALP 101
Query: 306 PHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLAT 365
L NLA L + N L +PP
Sbjct: 102 IGVFDQLVNLAELRLDRNQLKS-------------------------LPP---------- 126
Query: 366 LYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATLDLYDNSLSGS 424
+FDS L L+ LSLGYN+L S+P + LT+L L LY+N L
Sbjct: 127 ------RVFDS-------LTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRV 172
Query: 425 IPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEI 477
F L L TL L N+L + +L L L L +N + G I
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGII 225
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 73/180 (40%), Gaps = 2/180 (1%)
Query: 361 SNLATLYLYSNSLFDSIPSE-LGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDN 419
++ L L SN L S+PS+ L L +L L NKL L NL TL + DN
Sbjct: 37 ADTKKLDLQSNKL-SSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDN 95
Query: 420 SLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGN 479
L F L +L+ L L N+L P +LT L L L N L G
Sbjct: 96 KLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDK 155
Query: 480 LRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYN 539
L S+ L L NN+L + L+ L L L NN L +L L ML N
Sbjct: 156 LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Query: 169 SNLDTLHLYDNSLSDSIPSE-FGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
++ L L N LS S+PS+ F L L +L L NK L NL TL++ +N
Sbjct: 37 ADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDN 95
Query: 228 SLFDSIP-SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFG 286
L ++P L +L+ L L N+L P +LT L L L N L F
Sbjct: 96 KL-QALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFD 154
Query: 287 NLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLS 326
L SL L L N+L + + LT L TL + NN L
Sbjct: 155 KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 77/216 (35%), Gaps = 42/216 (19%)
Query: 438 LSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSI 497
L L NKLS + LT L LYL DN L G L+++ L + +NKL
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALP 101
Query: 498 PQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSN 557
L NL L L N L P +L L+ LS YN+L S+P GV D
Sbjct: 102 IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPK--GVFD---- 154
Query: 558 HIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGN 617
L L+ L L +N+L +F
Sbjct: 155 -----------------------------------KLTSLKELRLYNNQLKRVPEGAFDK 179
Query: 618 LVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHN 653
L +L L L NNQ R + L L L L N
Sbjct: 180 LTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 65/154 (42%), Gaps = 2/154 (1%)
Query: 390 LSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSI 449
L L NKLS + LT L L L DN L F L++L TL + NKL
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALP 101
Query: 450 PHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSL-GNLSNLV 508
L NL L L N L P +L ++ L+L N+L S+P+ + L++L
Sbjct: 102 IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLK 160
Query: 509 ILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLS 542
L LYNN L L L L N+L
Sbjct: 161 ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 26/142 (18%)
Query: 69 FSSFPHLAYLDLWHNQLYGNIPPQI-GNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQ 127
F +LA L L NQL ++PP++ ++++L YL L N L+ LK L+
Sbjct: 105 FDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163
Query: 128 LFENQLNGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPS 187
L+ NQL +P + L+ L TL L +N L
Sbjct: 164 LYNNQLK-RVP-----------------------EGAFDKLTELKTLKLDNNQLKRVPEG 199
Query: 188 EFGNLRSLSMLSLGYNKFSGSI 209
F +L L ML L N + +
Sbjct: 200 AFDSLEKLKMLQLQENPWDCTC 221
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 51/130 (39%)
Query: 527 NLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQ 586
N S+ S + +IP LDL SN + +L L L L N+L
Sbjct: 17 NKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76
Query: 587 LSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLS 646
+ L LE L ++ N+L F LV L L L NQ P + L L+
Sbjct: 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLT 136
Query: 647 ELDLSHNFLR 656
L L +N L+
Sbjct: 137 YLSLGYNELQ 146
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ + VAVK PG M+ Q FL E + ++H +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK---PGTMSVQA-FLEEANLMKTLQHDKLVRLYAV 76
Query: 883 CSH-----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIV 931
+ + SL L ++ K L + ++ I++ ++Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 132
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 990
HRD+ + NVL+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 991 DVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLP-TPSCIVQDKLISI 1048
DV+SFG+L E++ GK P N ++ R+P +C D+L I
Sbjct: 193 DVWSFGILLYEIVTYGKIP-------YPGRTNADVMTALSQGYRMPRVENC--PDELYDI 243
Query: 1049 VEVAISCLDENPESRPTMPKVSQLL 1073
+++ C E E RPT + +L
Sbjct: 244 MKM---CWKEKAEERPTFDYLQSVL 265
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 164
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 221
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 222 TVDIWSVGCIMAELLTGR 239
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D+E + DFG+A+ + + + T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 208
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 134/300 (44%), Gaps = 42/300 (14%)
Query: 800 TFEGKIVYEEIIRATNDFDDE---------HCIGKGGQGSVYKAEL---ASGEI-VAVKK 846
TF +E+ + ++F E +G G G V L + EI VA+K
Sbjct: 21 TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 847 FHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAA 899
+ +++FL E + + H NI++ G + + + + L +
Sbjct: 81 LKVGYTEKQ--RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR 138
Query: 900 AKDLGWT--RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
D +T + + +++GI+ + Y+ + VHRD++++N+L++ + VSDFG+++
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 958 FLKPD-SSNWTELAGT--YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIX 1013
L+ D + +T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----- 250
Query: 1014 XXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
++ A+DE RLP P D ++ ++ + C ++ +RP ++ +L
Sbjct: 251 YWEMSNQDVIKAVDEGY--RLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 43/309 (13%)
Query: 794 GLLSVLTFEG----KIVYEEIIRATNDFDDEHCIGKGGQGSVY---KAELASGEIVAVKK 846
G L VL F+G + ++ ++ D + H G+ S+Y +GE+VAVK
Sbjct: 13 GALEVL-FQGPGDPTVFHKRYLKKIRDLGEGHF----GKVSLYCYDPTNDGTGEMVAVKA 67
Query: 847 FHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHV-RHSLAMI--------LSNN 897
+ + + + E+ L + H +I+K+ G C SL ++ L +
Sbjct: 68 LKADAGPQ--HRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY 125
Query: 898 AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
+G + + + I + ++Y+H + +HRD++++NVLLD D + DFG+AK
Sbjct: 126 LPRHSIGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLDNDRLVKIGDFGLAK 182
Query: 958 FLKPDSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI-----KGKHPR 1009
+ + + + APE K DV+SFGV E++ P
Sbjct: 183 AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 242
Query: 1010 DFIXXXXXXXLNLNI-ALDEMLD--PRLPTPSCIVQDKL-ISIVEVAISCLDENPESRPT 1065
F+ + + L E+L+ RLP P DK + + +C + RPT
Sbjct: 243 KFLELIGIAQGQMTVLRLTELLERGERLPRP-----DKCPAEVYHLMKNCWETEASFRPT 297
Query: 1066 MPKVSQLLK 1074
+ +LK
Sbjct: 298 FENLIPILK 306
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 207
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Activator Mkk3b
Length = 360
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D+E + DFG+A+ + + + T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 204
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G VYKA+ + G IVA+K+ E + E+ L E+ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-GIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDA------------LSYMHNDCFPPI 930
H L ++ KDL N G+ D+ +++ H I
Sbjct: 88 I-HSERCLTLVFE--FMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RI 140
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEK 989
+HRD+ +N+L++ D ++DFG+A+ ++T T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 990 CDVYSFGVLALEVIKGK 1006
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G+G G VYKA+ + G IVA+K+ E + E+ L E+ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-GIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 883 CSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDA------------LSYMHNDCFPPI 930
H L ++ KDL N G+ D+ +++ H I
Sbjct: 88 I-HSERCLTLVFE--FMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RI 140
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEK 989
+HRD+ +N+L++ D ++DFG+A+ ++T T Y AP+ L + K +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 990 CDVYSFGVLALEVIKGK 1006
D++S G + E+I GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 31/266 (11%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
E +G G G V+ A VAVK PG M+ + FL E + ++H +VK
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA-FLAEANVMKTLQHDKLVKL 248
Query: 880 YGFCSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ + + SL L ++ +K + ++ I++ ++++ +
Sbjct: 249 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY-- 305
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTE 988
+HRD+ + N+L+ ++DFG+A+ ++ + E A + APE T
Sbjct: 306 -IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
K DV+SFG+L +E++ G+ P + N + R+P P ++
Sbjct: 365 KSDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYRMPRPENCPEE---- 413
Query: 1048 IVEVAISCLDENPESRPTMPKVSQLL 1073
+ + + C PE RPT + +L
Sbjct: 414 LYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 155
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 212
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 213 TVDIWSVGCIMAELLTGR 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 35/261 (13%)
Query: 837 ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCS-HVRHSLAMI-- 893
+GE+VAVK + + + + E+ L + H +I+K+ G C SL ++
Sbjct: 41 GTGEMVAVKALKADCGPQ--HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 894 ------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE 947
L + +G + + + I + ++Y+H + +HR+++++NVLLD D
Sbjct: 99 YVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLDNDRL 155
Query: 948 AHVSDFGIAKFLKPDSSNWTEL-----AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+ DFG+AK + P+ + + + + Y APE K DV+SFGV E+
Sbjct: 156 VKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 213
Query: 1003 I-----KGKHPRDFIXXXXXXXLNLNI-ALDEMLD--PRLPTPSCIVQDKL-ISIVEVAI 1053
+ P F+ + + L E+L+ RLP P DK + +
Sbjct: 214 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP-----DKCPCEVYHLMK 268
Query: 1054 SCLDENPESRPTMPKVSQLLK 1074
+C + RPT + +LK
Sbjct: 269 NCWETEASFRPTFENLIPILK 289
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 208
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A ++ VA+KK SP + T+ Q L E+K L RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQ-TYCQRTLREIKILLRFRHENIIGIND 108
Query: 882 FCSH-----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
V H + L + L + I L Y+H+ +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANV 165
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTMK-V 986
+HRD+ N+LL+ + + DFG+A+ PD + TE T Y APE+ K
Sbjct: 166 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 225
Query: 987 TEKCDVYSFGVLALEVIKGK 1006
T+ D++S G + E++ +
Sbjct: 226 TKSIDIWSVGCILAEMLSNR 245
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNAMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 384 LRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYN 443
LR + LG K+ +P + A LDL +N ++ +F NL++L TL L N
Sbjct: 33 LRVVQCSDLGLEKVPKDLP------PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINN 86
Query: 444 KLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN 503
K+S P + L L+ LYL N L +P ++ +++ L ++ N+++
Sbjct: 87 KISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNG 143
Query: 504 LSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAY------NKLSGSIPHSLGVLDLSSN 557
L+ ++++ L N L S E G + + LS+ + +P SL L L N
Sbjct: 144 LNQMIVVELGTNPLKSS-GIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGN 202
Query: 558 HIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGN 617
I L LN L KL L+ N +S + L + L L L++N+L +P +
Sbjct: 203 KITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261
Query: 618 LVKLHYLNLSNNQFS 632
+ + L NN S
Sbjct: 262 HKYIQVVYLHNNNIS 276
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 111/282 (39%), Gaps = 39/282 (13%)
Query: 192 LRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYN 251
LR + LG K +P + A L L NN + + + NL++L L L N
Sbjct: 33 LRVVQCSDLGLEKVPKDLP------PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINN 86
Query: 252 KLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGN 311
K+S P + L L LYL +N L +P + ++L L + N++ +
Sbjct: 87 KISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNG 143
Query: 312 LTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATL-YLY- 369
L + + + N L S G + L Y+
Sbjct: 144 LNQMIVVELGTNPLKSSGIEN-------------------------GAFQGMKKLSYIRI 178
Query: 370 SNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEF 429
+++ +IP L SL+ L L NK++ SL L NLA L L NS+S
Sbjct: 179 ADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSL 236
Query: 430 GNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG 471
N L L L NKL +P L + + +YL++N++S
Sbjct: 237 ANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 109/276 (39%), Gaps = 57/276 (20%)
Query: 174 LHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSI 233
L L +N +++ +F NL++L L L NK S P + L L LYL N L
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL---- 112
Query: 234 PSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSM 293
+L +P + L L ++EN ++ S F L + +
Sbjct: 113 -----------------KELPEKMPKT------LQELRVHENEITKVRKSVFNGLNQMIV 149
Query: 294 LNLGYNKL--NGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXX 351
+ LG N L +GI + + L+ + I + +++ +IP
Sbjct: 150 VELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ-------------------- 188
Query: 352 XIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNL 411
+PPS L L+L N + + L L +L+ L L +N +S SL N +L
Sbjct: 189 GLPPS------LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHL 242
Query: 412 ATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSG 447
L L +N L +P + + + + L N +S
Sbjct: 243 RELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277
Score = 36.6 bits (83), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 600 LDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLRE 657
LDL +N+++ F NL LH L L NN+ S+ P L+ L L LS N L+E
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE 114
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In
Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 121/293 (41%), Gaps = 62/293 (21%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTE-IRHRNIVK 878
E +G G G+V G VAVK+ + F L E+K LTE H N+++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTESDDHPNVIR 73
Query: 879 FYGFCSHVRHSL-------------AMILSNNAAAKDLGWTRRMN---VIKGISDALSYM 922
+Y CS ++ S N + ++L + N +++ I+ ++++
Sbjct: 74 YY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 923 HNDCFPPIVHRDISSKNVLLD----FDNEAH---------VSDFGIAKFLKPDS----SN 965
H+ I+HRD+ +N+L+ F + +SDFG+ K L N
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 188
Query: 966 WTELAGTYGYVAPE-------LAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXX 1017
+GT G+ APE L ++T D++S G + ++ KGKHP
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248
Query: 1018 XXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAIS-CLDENPESRPTMPKV 1069
+ +LDEM C+ LI+ IS +D +P RPT KV
Sbjct: 249 NIIRGIFSLDEM--------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 384 LRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYN 443
LR + LG K+ +P + A LDL +N ++ +F NL++L TL L N
Sbjct: 33 LRVVQCSDLGLEKVPKDLP------PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINN 86
Query: 444 KLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN 503
K+S P + L L+ LYL N L +P ++ +++ L ++ N+++
Sbjct: 87 KISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNG 143
Query: 504 LSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAY------NKLSGSIPHSLGVLDLSSN 557
L+ ++++ L N L S E G + + LS+ + +P SL L L N
Sbjct: 144 LNQMIVVELGTNPLKSS-GIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGN 202
Query: 558 HIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGN 617
I L LN L KL L+ N +S + L + L L L++N+L +P +
Sbjct: 203 KITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261
Query: 618 LVKLHYLNLSNNQFS 632
+ + L NN S
Sbjct: 262 HKYIQVVYLHNNNIS 276
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 111/282 (39%), Gaps = 39/282 (13%)
Query: 192 LRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYN 251
LR + LG K +P + A L L NN + + + NL++L L L N
Sbjct: 33 LRVVQCSDLGLEKVPKDLP------PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINN 86
Query: 252 KLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGN 311
K+S P + L L LYL +N L +P + ++L L + N++ +
Sbjct: 87 KISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNG 143
Query: 312 LTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATL-YLY- 369
L + + + N L S G + L Y+
Sbjct: 144 LNQMIVVELGTNPLKSSGIEN-------------------------GAFQGMKKLSYIRI 178
Query: 370 SNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEF 429
+++ +IP L SL+ L L NK++ SL L NLA L L NS+S
Sbjct: 179 ADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSL 236
Query: 430 GNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG 471
N L L L NKL +P L + + +YL++N++S
Sbjct: 237 ANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 109/276 (39%), Gaps = 57/276 (20%)
Query: 174 LHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSI 233
L L +N +++ +F NL++L L L NK S P + L L LYL N L
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL---- 112
Query: 234 PSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSM 293
+L +P + L L ++EN ++ S F L + +
Sbjct: 113 -----------------KELPEKMPKT------LQELRVHENEITKVRKSVFNGLNQMIV 149
Query: 294 LNLGYNKL--NGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXX 351
+ LG N L +GI + + L+ + I + +++ +IP
Sbjct: 150 VELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ-------------------- 188
Query: 352 XIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNL 411
+PPS L L+L N + + L L +L+ L L +N +S SL N +L
Sbjct: 189 GLPPS------LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHL 242
Query: 412 ATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSG 447
L L +N L +P + + + + L N +S
Sbjct: 243 RELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277
Score = 36.6 bits (83), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 600 LDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLRE 657
LDL +N+++ F NL LH L L NN+ S+ P L+ L L LS N L+E
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE 114
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
Length = 382
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V A + VA+KK SP + T+ Q L E++ L RH N++ G
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKI-SPFEHQ-TYCQRTLREIQILLRFRHENVI---G 105
Query: 882 FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG--------------ISDALSYMHNDCF 927
+R S + + +DL T ++K I L Y+H+
Sbjct: 106 IRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHS--- 162
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTM 984
++HRD+ N+L++ + + DFG+A+ P+ + TE T Y APE+
Sbjct: 163 ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 985 K-VTEKCDVYSFGVLALE------VIKGKH 1007
K T+ D++S G + E + GKH
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 168
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 225
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 226 TVDIWSVGCIMAELLTGR 243
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 207
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 164
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 221
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 222 TVDIWSVGCIMAELLTGR 239
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
Length = 319
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G+ VAVK + Q+ F EV+ + + H NIVK +
Sbjct: 16 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 74
Query: 883 CSHVRHSLAMILSNNAAAKDL------GWTRRMNV---IKGISDALSYMHNDCFPPIVHR 933
+L +++ + + GW + + I A+ Y H IVHR
Sbjct: 75 I-ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF---IVHR 130
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + + G+ Y APEL K + DV
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 189
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 190 WSLGVILYTLVSGSLPFD 207
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 156
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 213
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 214 TVDIWSVGCIMAELLTGR 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 214
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 215 TVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 222
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 223 TVDIWSVGCIMAELLTGR 240
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
N F +GKGG G V ++ A+G++ A KK + + LNE + L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAAAK-------DLGW--TRRMNVIKGISDALSYMH 923
R +V Y + + L + L N K G+ R + I L +H
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ IV+RD+ +N+LLD +SD G+A + P+ GT GY+APE+
Sbjct: 304 RE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKN 359
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
+ T D ++ G L E+I G+ P
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV---ATRWYRAPEIMLNWMHYNQ 209
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 204
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydropyrido-
Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 208
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 207
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 814 TNDFDDEHCIGKGGQGSVY-KAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR 872
++ + + +GKG G V + +G+ AVK + T ++ L EV+ L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 873 HRNIVKFYGFCSHV--------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHN 924
H NI K Y F ++ + + K +I+ + ++Y H
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK 144
Query: 925 DCFPPIVHRDISSKNVLLD---FDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ IVHRD+ +N+LL+ D + DFG++ + S + GT Y+APE+
Sbjct: 145 N---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYIAPEVL 200
Query: 982 YTMKVTEKCDVYSFGVL 998
+ EKCDV+S GV+
Sbjct: 201 HGT-YDEKCDVWSTGVI 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 209
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 198
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 214
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 215 TVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 157
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 214
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 215 TVDIWSVGCIMAELLTGR 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino Quinoline
Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 204
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 31/209 (14%)
Query: 823 IGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY- 880
+G GG G V + +GE VA+K+ L + ++ + E++ + ++ H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN--RERWCLEIQIMKKLNHPNVVSARE 79
Query: 881 ---GFCSHVRHSLAMILSNNAAAKDL---------------GWTRRMNVIKGISDALSYM 922
G + L ++ DL G R ++ IS AL Y+
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR--TLLSDISSALRYL 137
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
H + I+HRD+ +N++L + + D G AK L TE GT Y+APE
Sbjct: 138 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPE 193
Query: 980 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
L K T D +SFG LA E I G P
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating
Mutant
Length = 367
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV---ATRWYRAPEIMLNWMHYNQ 209
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide Substituted
Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 152
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV---ATRWYRAPEIMLNWMHYNQ 209
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 210 TVDIWSVGCIMAELLTGR 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 147
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 204
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 205 TVDIWSVGCIMAELLTGR 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122)
Length = 677
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 31/209 (14%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY- 880
+G GG G V + +GE VA+K+ L + ++ + E++ + ++ H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN--RERWCLEIQIMKKLNHPNVVSARE 80
Query: 881 ---GFCSHVRHSLAMILSNNAAAKDL---------------GWTRRMNVIKGISDALSYM 922
G + L ++ DL G R ++ IS AL Y+
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR--TLLSDISSALRYL 138
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
H + I+HRD+ +N++L + + D G AK L TE GT Y+APE
Sbjct: 139 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPE 194
Query: 980 LAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
L K T D +SFG LA E I G P
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 150
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 207
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 208 TVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 144
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 201
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 202 TVDIWSVGCIMAELLTGR 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2-
Carboxamide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 156
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 213
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 214 TVDIWSVGCIMAELLTGR 231
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 977
L ++H+ IV+RD+ N+LLD D ++DFG+ K + E GT Y+A
Sbjct: 131 GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIA 187
Query: 978 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
PE+ K D +SFGVL E++ G+ P
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 822 CIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
CIG+G G V++ S E VA+K + + +++FL E + + H +IV
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 79
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPP 929
K G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 80 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-- 137
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVT 987
VHRDI+++NVL+ ++ + DFG++++++ DS+ + G ++APE + T
Sbjct: 138 -VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 988 EKCDVYSFGVLALEVI 1003
DV+ FGV E++
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 822 CIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
CIG+G G V++ S E VA+K + + +++FL E + + H +IV
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 77
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPP 929
K G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 78 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-- 135
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVT 987
VHRDI+++NVL+ ++ + DFG++++++ DS+ + G ++APE + T
Sbjct: 136 -VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 988 EKCDVYSFGVLALEVI 1003
DV+ FGV E++
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 822 CIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
CIG+G G V++ S E VA+K + + +++FL E + + H +IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPP 929
K G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 75 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-- 132
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVT 987
VHRDI+++NVL+ ++ + DFG++++++ DS+ + G ++APE + T
Sbjct: 133 -VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 988 EKCDVYSFGVLALEVI 1003
DV+ FGV E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 822 CIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
CIG+G G V++ S E VA+K + + +++FL E + + H +IV
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 71
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPP 929
K G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 72 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-- 129
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVT 987
VHRDI+++NVL+ ++ + DFG++++++ DS+ + G ++APE + T
Sbjct: 130 -VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 988 EKCDVYSFGVLALEVI 1003
DV+ FGV E++
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 822 CIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
CIG+G G V++ S E VA+K + + +++FL E + + H +IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPP 929
K G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 75 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-- 132
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVT 987
VHRDI+++NVL+ ++ + DFG++++++ DS+ + G ++APE + T
Sbjct: 133 -VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 988 EKCDVYSFGVLALEVI 1003
DV+ FGV E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 822 CIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
CIG+G G V++ S E VA+K + + +++FL E + + H +IV
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 76
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPP 929
K G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 77 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-- 134
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVT 987
VHRDI+++NVL+ ++ + DFG++++++ DS+ + G ++APE + T
Sbjct: 135 -VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 988 EKCDVYSFGVLALEVI 1003
DV+ FGV E++
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
Length = 576
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
N F +GKGG G V ++ A+G++ A KK + + LNE + L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAAAK-------DLGWTRRMNVIKG--ISDALSYMH 923
R +V Y + + L + L N K G+ V I L +H
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT 983
+ IV+RD+ +N+LLD +SD G+A + P+ GT GY+APE+
Sbjct: 304 RE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKN 359
Query: 984 MKVTEKCDVYSFGVLALEVIKGKHP 1008
+ T D ++ G L E+I G+ P
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With A
Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N ++ L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D+E + DFG+ + + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine Based
Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 151
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 208
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 209 TVDIWSVGCIMAELLTGR 226
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 822 CIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
CIG+G G V++ S E VA+K + + +++FL E + + H +IV
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 102
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPP 929
K G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 103 KLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-- 160
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVT 987
VHRDI+++NVL+ ++ + DFG++++++ DS+ + G ++APE + T
Sbjct: 161 -VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 988 EKCDVYSFGVLALEVI 1003
DV+ FGV E++
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 32/203 (15%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV---- 877
+G G GSV A + SGE VA+KK P E+ F + E+ L ++H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLD 90
Query: 878 ---------KFYGFCSHVRHSLAMILSNNAAAKDLGWT----RRMNVIKGISDALSYMHN 924
FY F L M K +G + ++ + L Y+H+
Sbjct: 91 VFTPASSLRNFYDF------YLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT- 983
+VHRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ +
Sbjct: 145 ---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV---TRWYRAPEVILSW 198
Query: 984 MKVTEKCDVYSFGVLALEVIKGK 1006
M + D++S G + E++ GK
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV---ATRWYRAPEIMLNWMHYNQ 198
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 168
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + T Y APE+ M +
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV---ATRWYRAPEIMLNWMHYNQ 225
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 226 TVDIWSVGCIMAELLTGR 243
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 823 IGKGGQGSVYKAELAS------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G V+ AE + +VAVK + +Q+F E + LT ++H++I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 82
Query: 877 VKFYGFCSHVRHSL---------------------AMILS--NNAAAKDLGWTRRMNVIK 913
V+F+G C+ R L A +L+ + A LG + + V
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-- 971
++ + Y+ F VHRD++++N L+ + DFG+++ + S+++ + G
Sbjct: 143 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 197
Query: 972 --TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 823 IGKGGQGSVYKAELAS------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G V+ AE + +VAVK + +Q+F E + LT ++H++I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 76
Query: 877 VKFYGFCSHVRHSL---------------------AMILS--NNAAAKDLGWTRRMNVIK 913
V+F+G C+ R L A +L+ + A LG + + V
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-- 971
++ + Y+ F VHRD++++N L+ + DFG+++ + S+++ + G
Sbjct: 137 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 191
Query: 972 --TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 42/220 (19%)
Query: 823 IGKGGQGSVYKAELAS------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G V+ AE + +VAVK + +Q+F E + LT ++H++I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHI 105
Query: 877 VKFYGFCSHVRHSL---------------------AMILS--NNAAAKDLGWTRRMNVIK 913
V+F+G C+ R L A +L+ + A LG + + V
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-- 971
++ + Y+ F VHRD++++N L+ + DFG+++ + S+++ + G
Sbjct: 166 QVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 220
Query: 972 --TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/140 (35%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 162 PPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLAT 221
P + L +L TLHL L + P F L +L L L N ++ +L NL
Sbjct: 97 PTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTH 156
Query: 222 LYLHNNSLFDSIPSE-LGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGS 280
L+LH N + S+P L SL L L N ++ PH+ +L L TLYL+ N+LS
Sbjct: 157 LFLHGNRI-PSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-M 214
Query: 281 IPSE-FGNLRSLSMLNLGYN 299
+P+E LRSL L L N
Sbjct: 215 LPAEVLVPLRSLQYLRLNDN 234
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 270 LYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSI 329
++L+ N +S + F + R+L++L L N L GI + LT L L + +N+ +
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVV 95
Query: 330 PSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSM 389
P + L +L TL+L L + P L +L
Sbjct: 96 D-----------------------PTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQY 132
Query: 390 LSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSI 449
L L N L ++ +L NL L L+ N + F L SL L L N ++
Sbjct: 133 LYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVH 192
Query: 450 PHSLGNLTNLDALYLYDNSLSGSIPGEI-GNLRSISNLALNNN 491
PH+ +L L LYL+ N+LS +P E+ LRS+ L LN+N
Sbjct: 193 PHAFRDLGRLMTLYLFANNLS-MLPAEVLVPLRSLQYLRLNDN 234
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 164 SLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYN-KFSGSIPHSLGNLTNLATL 222
S + NL L L+ N+L+ + F L L L L N + P + L +L TL
Sbjct: 50 SFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTL 109
Query: 223 YLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIP 282
+L L + P L +L L L N L ++ +L NL L+L+ N +
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPE 169
Query: 283 SEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEI 333
F L SL L L N + + PH+ +L L TLY+ N+LS +P+E+
Sbjct: 170 HAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEV 219
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 362 NLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYN-KLSGSIPHSLGNLTNLATLDLYDNS 420
NL L+L+SN+L + L L L L N +L P + L +L TL L
Sbjct: 56 NLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCG 115
Query: 421 LSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNL 480
L P F L +L L L N L ++ +L NL L+L+ N + L
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGL 175
Query: 481 RSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSE-LGNLRSLSMLSFAYN 539
S+ L L+ N ++ P + +L L+ LYL+ N+L +P+E L LRSL L N
Sbjct: 176 HSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL-SMLPAEVLVPLRSLQYLRLNDN 234
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 203 NKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYN-KLSGSIPHSL 261
N+ S S + NL L+LH+N+L + L L L L N +L P +
Sbjct: 41 NRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTF 100
Query: 262 GNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIH 321
L +L TL+L L P F L +L L L N L + ++ +L NL L++H
Sbjct: 101 RGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLH 160
Query: 322 NNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXI-PPSLGYLSNLATLYLYSNSLFDSIPSE 380
N + S+P + P + L L TLYL++N+L +P+E
Sbjct: 161 GNRIP-SVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL-SMLPAE 218
Query: 381 -LGNLRSLSMLSLGYN 395
L LRSL L L N
Sbjct: 219 VLVPLRSLQYLRLNDN 234
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 222 LYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENS-LSGS 280
++LH N + + + R+L++L L N L+G + LT L L L +N+ L
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVV 95
Query: 281 IPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXX 340
P+ F L L L+L L + P L L LY+ +N+L ++P
Sbjct: 96 DPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDN-------- 146
Query: 341 XXXXXXXXXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSE-LGNLRSLSMLSLGYNKLSG 399
+ L NL L+L+ N + S+P L SL L L N ++
Sbjct: 147 ---------------TFRDLGNLTHLFLHGNRI-PSVPEHAFRGLHSLDRLLLHQNHVAR 190
Query: 400 SIPHSLGNLTNLATLDLYDNSLSGSIPSE-FGNLRSLSTLSLGYN 443
PH+ +L L TL L+ N+LS +P+E LRSL L L N
Sbjct: 191 VHPHAFRDLGRLMTLYLFANNLS-MLPAEVLVPLRSLQYLRLNDN 234
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 61/212 (28%), Positives = 88/212 (41%), Gaps = 19/212 (8%)
Query: 395 NKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYN-KLSGSIPHSL 453
N++S S + NL L L+ N+L+G + F L L L L N +L P +
Sbjct: 41 NRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTF 100
Query: 454 GNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLY 513
L +L L+L L PG L ++ L L +N L + +L NL L+L+
Sbjct: 101 RGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLH 160
Query: 514 NNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFL 573
N + S+P A+ L HSL L L NH+ P L L
Sbjct: 161 GNRI-PSVPEH------------AFRGL-----HSLDRLLLHQNHVARVHPHAFRDLGRL 202
Query: 574 IKLILAQNQLSGQLSPKLGSLAQLEHLDLSSN 605
+ L L N LS + L L L++L L+ N
Sbjct: 203 MTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 37.4 bits (85), Expect = 0.046, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 78/198 (39%), Gaps = 22/198 (11%)
Query: 482 SISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKL 541
S + L+ N++S S + NL IL+L++N+L + L L L + N
Sbjct: 32 SSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNA- 90
Query: 542 SGSIPHSLGVLDLSSNHIVGEIPT---------ELGK-----LNFLIKLILAQNQLSGQL 587
L V+D ++ +G + T ELG L L L L N L
Sbjct: 91 ------QLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALP 144
Query: 588 SPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSE 647
L L HL L NR+ + +F L L L L N +R P +L L
Sbjct: 145 DNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMT 204
Query: 648 LDLSHNFLREAIPSQICI 665
L L N L +P+++ +
Sbjct: 205 LYLFANNL-SMLPAEVLV 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
Length = 336
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 44/216 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNE--VKALTEIRHRNIVKFY 880
IG+G G+VYK L VAVK F +Q F+NE + + + H NI +F
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVF------SFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 881 GFCSHV----RHSLAMILS---NNAAAKDLG-----WTRRMNVIKGISDALSYMHNDC-- 926
V R +++ N + K L W + ++ L+Y+H +
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 927 ----FPPIVHRDISSKNVLLDFDNEAHVSDFGIA------KFLKP---DSSNWTELAGTY 973
P I HRD++S+NVL+ D +SDFG++ + ++P D++ +E+ GT
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV-GTI 192
Query: 974 GYVAPEL---AYTMKVTE----KCDVYSFGVLALEV 1002
Y+APE+ A ++ E + D+Y+ G++ E+
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 822 CIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
CIG+G G V++ S E VA+K + + +++FL E + + H +IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPP 929
K G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 75 KLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF-- 132
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVT 987
VHRDI+++NVL+ + + DFG++++++ DS+ + G ++APE + T
Sbjct: 133 -VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 988 EKCDVYSFGVLALEVI 1003
DV+ FGV E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A 1-O-Tolyl-1,2,
3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N L +I I L Y+H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 198
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
Length = 295
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 819 DEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
D +GKG G VY S ++ +A+K+ + + Q E+ ++H+NIV
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIV 82
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-------------VIKGISDALSYMHN 924
++ G S + I L R K I + L Y+H+
Sbjct: 83 QYLG--SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 925 DCFPPIVHRDISSKNVLLD-FDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL--A 981
+ IVHRDI NVL++ + +SDFG +K L + GT Y+APE+
Sbjct: 141 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK 197
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ D++S G +E+ GK P
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 819 DEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
D +GKG G VY S ++ +A+K+ + + Q E+ ++H+NIV
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIV 68
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN-------------VIKGISDALSYMHN 924
++ G S + I L R K I + L Y+H+
Sbjct: 69 QYLG--SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 925 DCFPPIVHRDISSKNVLLD-FDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL--A 981
+ IVHRDI NVL++ + +SDFG +K L + GT Y+APE+
Sbjct: 127 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK 183
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ D++S G +E+ GK P
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
N+F+ +GKG G V E A+G A+K + L E + L RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ ++ G I AL Y+H++
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 127
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RD+ +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 128 --KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 986 VTEKCDVYSFGVLALEVIKGKHP 1008
D + GV+ E++ G+ P
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
N+F+ +GKG G V E A+G A+K + L E + L RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ ++ G I AL Y+H++
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 128
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RD+ +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 129 --KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 986 VTEKCDVYSFGVLALEVIKGKHP 1008
D + GV+ E++ G+ P
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
N+F+ +GKG G V E A+G A+K + L E + L RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ ++ G I AL Y+H++
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 129
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RD+ +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 130 --KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 986 VTEKCDVYSFGVLALEVIKGKHP 1008
D + GV+ E++ G+ P
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 165
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + T Y APE+ M +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVATRWYRAPEIMLNWMHYNQ 222
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 223 TVDIWSVGCIMAELLTGR 240
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 36/305 (11%)
Query: 791 NTRGLLSVLTFEGKIVYEEIIR--ATNDFDDEHCIGKGGQGSVYKA-ELASGE------- 840
R L+ LT G+ + ++R +F +G G G+VYK + GE
Sbjct: 23 QERELVEPLTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 82
Query: 841 IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFC--SHVR-----HSLAMI 893
I+ +++ SP +E L+E + + + ++ + G C S V+ +
Sbjct: 83 IMELREATSP-----KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 137
Query: 894 LSNNAAAKD-LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSD 952
L KD +G +N I+ ++Y+ + +VHRD++++NVL+ ++D
Sbjct: 138 LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 194
Query: 953 FGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPR 1009
FG+AK L + + G ++A E T + DV+S+GV E++ G P
Sbjct: 195 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 254
Query: 1010 DFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
D I ++ L++ RLP P D + +V+ + D P+ R + +
Sbjct: 255 DGIPAS-----EISSILEK--GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 307
Query: 1070 SQLLK 1074
S++ +
Sbjct: 308 SKMAR 312
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 39/265 (14%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
E +G G G V+ A VAVK PG M+ + FL E + ++H +VK
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSVEA-FLAEANVMKTLQHDKLVKL 242
Query: 880 YGFCSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ + + SL L ++ +K + ++ I++ ++++ +
Sbjct: 243 HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY-- 299
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+HRD+ + N+L+ ++DFG+A+ WT APE T K
Sbjct: 300 -IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFTIK 349
Query: 990 CDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048
DV+SFG+L +E++ G+ P + N + R+P P ++ +
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYRMPRPENCPEE----L 398
Query: 1049 VEVAISCLDENPESRPTMPKVSQLL 1073
+ + C PE RPT + +L
Sbjct: 399 YNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase
Domain Of Focal Adhesion Kinase With A Phosphorylated
Activation Loop
Length = 276
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 822 CIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877
CIG+G G V++ S E VA+K + + +++FL E + + H +IV
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIV 74
Query: 878 KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPP 929
K G + + M L + R+ ++ +S AL+Y+ + F
Sbjct: 75 KLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF-- 132
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVT 987
VHRDI+++NVL+ ++ + DFG++++++ DS+ G ++APE + T
Sbjct: 133 -VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 988 EKCDVYSFGVLALEVI 1003
DV+ FGV E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A
Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 53/277 (19%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI----- 876
+G+G G V K + SG+I+AVK+ + + + Q+ L ++ +I R +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDL----DISMRTVDCPFT 112
Query: 877 VKFYGFCSHVRHS---LAMILSNNAAAK------DLGWTRRMNVIKGIS----DALSYMH 923
V FYG + R + M L + + K D G T +++ I+ AL ++H
Sbjct: 113 VTFYG--ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL--- 980
+ ++HRD+ NVL++ + + DFGI+ +L DS T AG Y+APE
Sbjct: 171 SKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERINP 227
Query: 981 -----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLP 1035
Y++ K D++S G+ +E+ + P D L ++E P+LP
Sbjct: 228 ELNQKGYSV----KSDIWSLGITMIELAILRFPYD---SWGTPFQQLKQVVEEP-SPQLP 279
Query: 1036 TPSCIVQDKLIS-IVEVAISCLDENPESRPTMPKVSQ 1071
DK + V+ CL +N + RPT P++ Q
Sbjct: 280 A------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 141
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 198
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 199 TVDIWSVGCIMAELLTGR 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 142
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 199
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 200 TVDIWSVGCIMAELLTGR 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 856 TFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM--------ILSNNAAAKDLGWTR 907
F +E NE+ L + H NI+K + ++ + +
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 908 RMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSS 964
N++K I + Y+H IVHRDI +N+LL+ N + DFG++ F D
Sbjct: 148 AANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVL 998
L GT Y+APE+ K EKCDV+S GV+
Sbjct: 205 LRDRL-GTAYYIAPEVL-KKKYNEKCDVWSCGVI 236
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 142
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 199
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 200 TVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 86
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 143
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ M +
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 200
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 201 TVDIWSVGCIMAELLTGR 218
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 85
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + D+G+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 53/277 (19%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI----- 876
+G+G G V K + SG+I+AVK+ + + + Q+ L ++ +I R +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDL----DISMRTVDCPFT 68
Query: 877 VKFYGFCSHVRHS---LAMILSNNAAAK------DLGWTRRMNVIKGIS----DALSYMH 923
V FYG + R + M L + + K D G T +++ I+ AL ++H
Sbjct: 69 VTFYG--ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL--- 980
+ ++HRD+ NVL++ + + DFGI+ +L D + + AG Y+APE
Sbjct: 127 SKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPERINP 183
Query: 981 -----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLP 1035
Y++ K D++S G+ +E+ + P D L ++E P+LP
Sbjct: 184 ELNQKGYSV----KSDIWSLGITMIELAILRFPYD---SWGTPFQQLKQVVEEP-SPQLP 235
Query: 1036 TPSCIVQDKLIS-IVEVAISCLDENPESRPTMPKVSQ 1071
DK + V+ CL +N + RPT P++ Q
Sbjct: 236 A------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 33/212 (15%)
Query: 817 FDDEHCIGKGGQGSVYKA-------ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALT 869
FD E IG+G +VYK E+A E+ K S +Q F E + L
Sbjct: 30 FDIE--IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE-------RQRFKEEAEXLK 80
Query: 870 EIRHRNIVKFY-GFCSHVRHSLAMILSNNAAAKDL--GWTRRMNVIK---------GISD 917
++H NIV+FY + S V+ ++L + +R V K I
Sbjct: 81 GLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILK 140
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDF-DNEAHVSDFGIAKFLKPDSSNWTELAGTYGYV 976
L ++H PPI+HRD+ N+ + + D G+A + +S + GT +
Sbjct: 141 GLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFX 197
Query: 977 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
APE Y K E DVY+FG LE ++P
Sbjct: 198 APE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
Length = 378
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 92
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 153 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 208
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 81
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 142 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 197
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 6/260 (2%)
Query: 379 SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTL 438
E + L L L N +S P + NL NL TL L N L F L +L+ L
Sbjct: 50 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 109
Query: 439 SLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIP 498
+ NK+ + + +L NL +L + DN L L S+ L L L+
Sbjct: 110 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169
Query: 499 QSLGNLSNLVILYLYN---NSLFDSIPSELGNLRSLSMLSFAY-NKLSGSIPHSLGVLDL 554
++L +L L++L L + N++ D L L+ L + + Y + ++ + + L + L
Sbjct: 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSL 229
Query: 555 SSNHI-VGEIP-TELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIP 612
S H + +P + L +L L L+ N +S L L +L+ + L +L+ P
Sbjct: 230 SITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 289
Query: 613 KSFGNLVKLHYLNLSNNQFS 632
+F L L LN+S NQ +
Sbjct: 290 YAFRGLNYLRVLNVSGNQLT 309
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 5/277 (1%)
Query: 187 SEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIP-SELGNLRSLSM 245
EF + L L L N S P + NL NL TL L +N L IP L +L+
Sbjct: 50 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL-KLIPLGVFTGLSNLTK 108
Query: 246 LSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGII 305
L + NK+ + + +L NL +L + +N L F L SL L L L I
Sbjct: 109 LDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168
Query: 306 PHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLAT 365
+L +L L L + + +++ + P+ Y NL +
Sbjct: 169 TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTS 228
Query: 366 LYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSI 425
L + +L + +L L L+L YN +S L L L + L L+
Sbjct: 229 LSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVE 288
Query: 426 PSEFGNLRSLSTLSLGYNKLSG---SIPHSLGNLTNL 459
P F L L L++ N+L+ S+ HS+GNL L
Sbjct: 289 PYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETL 325
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 106/266 (39%), Gaps = 10/266 (3%)
Query: 392 LGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPH 451
L + K ++P + T L LDL N + EF + L L L N +S P
Sbjct: 17 LCHRKRFVAVPEGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPG 74
Query: 452 SLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILY 511
+ NL NL L L N L G L +++ L ++ NK+ + +L NL L
Sbjct: 75 AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134
Query: 512 LYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIP-------HSLGVLDLSSNHIVGEIP 564
+ +N L L SL L+ L+ SIP H L VL L +I
Sbjct: 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRD 193
Query: 565 TELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYL 624
+L L L ++ ++P L L ++ L+ + +LV L +L
Sbjct: 194 YSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFL 253
Query: 625 NLSNNQFSRGIPIKLEELIHLSELDL 650
NLS N S L EL+ L E+ L
Sbjct: 254 NLSYNPISTIEGSMLHELLRLQEIQL 279
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 113/277 (40%), Gaps = 31/277 (11%)
Query: 68 SFSSFPHLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEI-GHLSYLKTL 126
F+SFPHL L+L N + P N+ L+ L L SN IP + LS L L
Sbjct: 51 EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL-KLIPLGVFTGLSNLTKL 109
Query: 127 QLFENQLNGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIP 186
+ EN++ + Y + + L++L+ L L +L+ SIP
Sbjct: 110 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT-SIP 168
Query: 187 SE-FGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSI-PSELG--NLRS 242
+E +L L +L L + + +S L L L + + D++ P+ L NL S
Sbjct: 169 TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTS 228
Query: 243 LSM---------------------LSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSI 281
LS+ L+L YN +S L L L + L L+
Sbjct: 229 LSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVE 288
Query: 282 PSEFGNLRSLSMLNLGYNKLNGI---IPHSLGNLTNL 315
P F L L +LN+ N+L + + HS+GNL L
Sbjct: 289 PYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETL 325
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 126/306 (41%), Gaps = 13/306 (4%)
Query: 231 DSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRS 290
+ IP+E +L LG N++ + +L L L EN +S P F NL +
Sbjct: 28 EGIPTET------RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN 81
Query: 291 LSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXX 350
L L L N+L I L+NL L I N + +
Sbjct: 82 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV 141
Query: 351 XXIPPSLGYLSNLATLYLYSNSLFDSIPSE-LGNLRSLSMLSLGYNKLSGSIPHSLGNLT 409
+ L++L L L +L SIP+E L +L L +L L + ++ +S L
Sbjct: 142 YISHRAFSGLNSLEQLTLEKCNL-TSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 200
Query: 410 NLATLDL-YDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNS 468
L L++ + L P+ L +L++LS+ + L+ ++ +L L L L N
Sbjct: 201 RLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP 259
Query: 469 LSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNN---SLFDSIPSEL 525
+S + L + + L +L+ P + L+ L +L + N +L +S+ +
Sbjct: 260 ISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSV 319
Query: 526 GNLRSL 531
GNL +L
Sbjct: 320 GNLETL 325
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 92/231 (39%), Gaps = 8/231 (3%)
Query: 78 LDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSI 137
LDL N++ + + L+ L+L+ N+ P +L L+TL L N+L I
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LI 95
Query: 138 PYEIGR-XXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLS 196
P + L+ +L NL +L + DN L F L SL
Sbjct: 96 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155
Query: 197 MLSLGYNKFSGSIPHSLGNLTNLATLYLHN---NSLFDSIPSELGNLRSLSMLSLGYNKL 253
L+L + +L +L L L L + N++ D L L+ L + Y L
Sbjct: 156 QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY--L 213
Query: 254 SGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGI 304
P+ L L NL +L + +L+ +L L LNL YN ++ I
Sbjct: 214 DTMTPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTI 263
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 45/109 (41%)
Query: 545 IPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSS 604
IP +LDL N I E L +L L +N +S +L L L L S
Sbjct: 30 IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89
Query: 605 NRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHN 653
NRL F L L L++S N+ + ++L +L L++ N
Sbjct: 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDN 138
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 30/202 (14%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV---- 877
+G G GSV A + SGE VA+KK P E+ F + E+ L ++H N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENVIGLLD 108
Query: 878 ------------KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHND 925
FY ++ L I+ + + + + ++ + L Y+H+
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSA 163
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-M 984
+VHRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ + M
Sbjct: 164 G---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV---VTRWYRAPEVILSWM 217
Query: 985 KVTEKCDVYSFGVLALEVIKGK 1006
+ D++S G + E++ GK
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 85
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 811 IRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALT 869
+ +++ F +G G +VYK +G VA+K+ L E + E+ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK--LDSEEGTPSTAIREISLMK 58
Query: 870 EIRHRNIVKFYGFCSHVRHSLAMI-------LSNNAAAKDLGWTRR---MNVIKGIS--- 916
E++H NIV+ Y H + L ++ L ++ +G T R +N++K
Sbjct: 59 ELKHENIVRLYDVI-HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 917 -DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGY 975
L++ H + I+HRD+ +N+L++ + + DFG+A+ + ++ T Y
Sbjct: 118 LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 976 VAPE-LAYTMKVTEKCDVYSFGVLALEVIKGK 1006
AP+ L + + D++S G + E+I GK
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG--- 914
++E EV L ++H NIV++ S + I+ + DL +R+N KG
Sbjct: 67 REESRREVAVLANMKHPNIVQYRE--SFEENGSLYIVMDYCEGGDL--FKRINAQKGVLF 122
Query: 915 -----------ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963
I AL ++H+ I+HRDI S+N+ L D + DFGIA+ L
Sbjct: 123 QEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179
Query: 964 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 1007
GT Y++PE+ K D+++ G + E+ KH
Sbjct: 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 859 QEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV------- 911
+E + E + + ++ + IV+ G C L M ++ +R +
Sbjct: 55 EEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 114
Query: 912 -IKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT-EL 969
+ +S + Y+ F VHRD++++NVLL + A +SDFG++K L D S +T
Sbjct: 115 LLHQVSMGMKYLEEKNF---VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171
Query: 970 AGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
AG + + APE K + + DV+S+GV E + G+ P
Sbjct: 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ + VAVK PG M+ Q FL E + ++H +V+ Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK---PGTMSVQA-FLEEANLMKTLQHDKLVRLYAV 75
Query: 883 CSH-----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIV 931
+ + SL L ++ K L + ++ I++ ++Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---I 131
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKC 990
HRD+ + NVL+ ++DFG+A+ ++ + E A + APE T K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 991 DVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLP-TPSCIVQDKLISI 1048
+V+SFG+L E++ GK P N ++ R+P +C D+L I
Sbjct: 192 NVWSFGILLYEIVTYGKIP-------YPGRTNADVMSALSQGYRMPRMENC--PDELYDI 242
Query: 1049 VEVAISCLDENPESRPTMPKVSQLL 1073
+++ C E E RPT + +L
Sbjct: 243 MKM---CWKEKAEERPTFDYLQSVL 264
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ + +DL + + GI L++
Sbjct: 62 NIVKLLDVI-HTENKLYLVFEH--VHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 86
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKD-LGWTRRMNVIKGISD 917
NIV+ Y F S +V ++ + + + AK L + +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 147 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 202
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
Length = 391
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 78
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 139 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 194
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 107
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 223
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 13 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 69
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 239
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 240 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 14 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 70
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 240
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 241 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 15 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 71
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 241
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 242 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 12 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 68
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 238
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 239 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 12 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 68
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 238
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 239 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 11 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 67
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 237
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 238 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 803 GKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTF 857
G + I++ T +F +G G G+VYK + GE V A+K+ +
Sbjct: 1 GAMALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-- 57
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRM 909
+E L+E + + + ++ + G C S V+ +L KD +G +
Sbjct: 58 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL 117
Query: 910 NVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969
N I++ ++Y+ + +VHRD++++NVL+ ++DFG+AK L + +
Sbjct: 118 NWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 970 AGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIAL 1026
G ++A E T + DV+S+GV E++ G P D I + L
Sbjct: 175 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----L 229
Query: 1027 DEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
++ RLP P D + +V+ + D P+ R + + S++ +
Sbjct: 230 EK--GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 275
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DFG+A+ T T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 152
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 213 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 268
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
Length = 424
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 111
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 172 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 227
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V K + SG I+A K H L + + + + E++ L E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIH--LEIKPAIRNQIIRELQVLHECNS 73
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM--NVIKGISDA----LSYMHND 925
IV FYG F S S+ M + + + L +R+ ++ +S A L+Y+
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
I+HRD+ N+L++ E + DFG++ L +N GT Y+APE
Sbjct: 134 --HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPERLQGTH 189
Query: 986 VTEKCDVYSFGVLALEVIKGKHP 1008
+ + D++S G+ +E+ G++P
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 113/273 (41%), Gaps = 55/273 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 57 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 110
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 164
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS----SNWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + N T
Sbjct: 165 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T K T K DV+SFGVL E++ +G P + +I + + R
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-------TFDITVYLLQGRR 274
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTM 1066
L P D L EV + C E RP+
Sbjct: 275 LLQPE-YCPDPL---YEVMLKCWHPKAEMRPSF 303
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
Length = 318
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 113/273 (41%), Gaps = 55/273 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 56 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 109
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 163
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS----SNWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + N T
Sbjct: 164 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T K T K DV+SFGVL E++ +G P + +I + + R
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-------TFDITVYLLQGRR 273
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTM 1066
L P D L EV + C E RP+
Sbjct: 274 LLQPE-YCPDPL---YEVMLKCWHPKAEMRPSF 302
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + DF +A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 863 NEVKALTEIR----HRNIVKFYG-FCSHVRHSLAMILSNNA-------AAKDLGWTRRMN 910
N K +T ++ H NIVK + F + L M L N K T
Sbjct: 51 NTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY 110
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN---EAHVSDFGIAKFLKPDSSNWT 967
+++ + A+S+MH+ +VHRD+ +N+L +N E + DFG A+ PD+
Sbjct: 111 IMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
T Y APEL E CD++S GV+ ++ G+ P
Sbjct: 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
Length = 422
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 109
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 170 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 225
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI LS+
Sbjct: 63 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G+ VAV+ + Q+ F EV+ + + H NIVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 883 CSHVRHSLAMILSNNAAAKDLGWT---RRMN------VIKGISDALSYMHNDCFPPIVHR 933
+L +++ + + + RM + I A+ Y H IVHR
Sbjct: 82 I-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + + E G+ Y APEL K + DV
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDEFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 197 WSLGVILYTLVSGSLPFD 214
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 107
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 223
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 910 NVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969
++++ + +A+S++H + IVHRD+ +N+LLD + + +SDFG + L+P EL
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLREL 259
Query: 970 AGTYGYVAPE-LAYTMKVT-----EKCDVYSFGVLALEVIKGKHP 1008
GT GY+APE L +M T ++ D+++ GV+ ++ G P
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + F N E++ + ++ H
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--------DKRFKNRELQIMRKLDHC 101
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNV-IKGISD 917
NIV+ Y F S +V ++ + + + AK + + + +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYGYV 976
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y Y
Sbjct: 162 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 217
Query: 977 APELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
APEL + T DV+S G + E++ G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine
At 2a Resolution
Length = 345
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 977
L ++H+ IV+RD+ N+LLD D ++DFG+ K + GT Y+A
Sbjct: 130 GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIA 186
Query: 978 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
PE+ K D +SFGVL E++ G+ P
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFY 880
+GKG G V+K+ + +GE+VAVKK Q+ F E+ LTE+ H NIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 881 GFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISD---------ALSYMHNDCFPPIV 931
+ + L + DL R N+++ + + Y+H+ ++
Sbjct: 76 NVL-RADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LL 131
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKF---------------------LKPDSSNWTELA 970
HRD+ N+LL+ + V+DFG+++ D T+
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 971 GTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
T Y APE+ + K T+ D++S G + E++ GK
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEV---KAL 868
AT+ ++ IG G G+VYKA + SG VA+K P GE + EV + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPISTVREVALLRRL 60
Query: 869 TEIRHRNIVKFYGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK 913
H N+V+ C+ HV L L + A L ++++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY 973
L ++H +C IVHRD+ +N+L+ ++DFG+A+ + + T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVVVTL 175
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 1006
Y APE+ D++S G + E+ + K
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 4e-08, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEV---KAL 868
AT+ ++ IG G G+VYKA + SG VA+K P GE + EV + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPISTVREVALLRRL 60
Query: 869 TEIRHRNIVKFYGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK 913
H N+V+ C+ HV L L + A L ++++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY 973
L ++H +C IVHRD+ +N+L+ ++DFG+A+ + + + T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TL 175
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 1006
Y APE+ D++S G + E+ + K
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor
Length = 446
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 14/234 (5%)
Query: 815 NDFDDEHCIGKGGQGSVY-KAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
N+F+ +GKG G V E A+G A+K + L E + L RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ ++ G I AL Y+H++
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 270
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RD+ +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 271 --KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 328
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSC 1039
D + GV+ E++ G+ P F L I ++E+ PR P
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLFEL-ILMEEIRFPRTLGPEA 379
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 14/234 (5%)
Query: 815 NDFDDEHCIGKGGQGSVY-KAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
N+F+ +GKG G V E A+G A+K + L E + L RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 874 RNIVKF-YGFCSHVRHSLAMILSNNAA-----AKDLGWTRRMNVIKG--ISDALSYMHND 925
+ Y F +H R M +N +++ ++ G I AL Y+H++
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 267
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
+V+RD+ +N++LD D ++DFG+ K D + GT Y+APE+
Sbjct: 268 --KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 986 VTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSC 1039
D + GV+ E++ G+ P F L I ++E+ PR P
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLFEL-ILMEEIRFPRTLGPEA 376
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + FG+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 11 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 67
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 237
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 238 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEV---KAL 868
AT+ ++ IG G G+VYKA + SG VA+K P GE + EV + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPISTVREVALLRRL 60
Query: 869 TEIRHRNIVKFYGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK 913
H N+V+ C+ HV L L + A L ++++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY 973
L ++H +C IVHRD+ +N+L+ ++DFG+A+ + + T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVVTL 175
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 1006
Y APE+ D++S G + E+ + K
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 108/263 (41%), Gaps = 42/263 (15%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAV-------KKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+G G G+VYK + GE V + ++ SP +E L+E + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP-----KANKEILDEAYVMAGVGSP 79
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKD--------LGWTRRMNVIKGISDALSYMHNDC 926
+ + G C L L D LG +N I+ +SY+ +
Sbjct: 80 YVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED-- 137
Query: 927 FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTM 984
+VHRD++++NVL+ N ++DFG+A+ L D + + G ++A E
Sbjct: 138 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 985 KVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDP--RLPTPSCIV 1041
+ T + DV+S+GV E++ G P D I + ++L+ RLP P
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---------EIPDLLEKGERLPQPPICT 247
Query: 1042 QDKLISIVEVAISCLDENPESRP 1064
I + + + C + E RP
Sbjct: 248 ----IDVYMIMVKCWMIDSECRP 266
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 68/291 (23%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 822 CIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
C+GKG G V++ L GE VAVK F S E ++ +E E+ +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSR--DEQSWFRE--TEIYNTVLLRHDNILGFIA 69
Query: 882 FCSHVRHS---LAMILSNNAAAKDLGWTRR--------MNVIKGISDALSYMHNDCF--- 927
R+S L +I + + +R + + + L+++H + F
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 928 --PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA-----GTYGYVAPEL 980
P I HRD S+NVL+ + + ++D G+A + S++ ++ GT Y+APE+
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 981 AYTMKVTEKC-------DVYSFGVLALEVIKGKHPRDFIXXXXXXXLNL---NIALDEM- 1029
++ C D+++FG++ E+ + + ++ + + ++M
Sbjct: 189 -LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMK 247
Query: 1030 ----LDPRLPT-PSCIVQDKLIS-IVEVAISCLDENPESRPTMPKVSQLLK 1074
+D + PT P+ + D ++S + ++ C NP +R T ++ + L+
Sbjct: 248 KVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQ 298
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
094
Length = 317
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 823 IGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+GKGG Y+ ++ + E+ A K + + +++ E+ + + ++V F+G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 882 F-------------CSHVRHSLAMILSNNAAAKDLGWTRRM-NVIKGISDALSYMHNDCF 927
F C R SL + A + M I+G+ Y+HN+
Sbjct: 110 FFEDDDFVYVVLEICR--RRSLLELHKRRKAVTEPEARYFMRQTIQGVQ----YLHNN-- 161
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D + + DFG+A ++ D +L GT Y+APE+ +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 988 EKCDVYSFGVLALEVIKGKHP 1008
+ D++S G + ++ GK P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
562
Length = 301
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 823 IGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+GKGG Y+ ++ + E+ A K + + +++ E+ + + ++V F+G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 882 F-------------CSHVRHSLAMILSNNAAAKDLGWTRRM-NVIKGISDALSYMHNDCF 927
F C R SL + A + M I+G+ Y+HN+
Sbjct: 94 FFEDDDFVYVVLEICR--RRSLLELHKRRKAVTEPEARYFMRQTIQGVQ----YLHNN-- 145
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D + + DFG+A ++ D +L GT Y+APE+ +
Sbjct: 146 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 988 EKCDVYSFGVLALEVIKGKHP 1008
+ D++S G + ++ GK P
Sbjct: 205 FEVDIWSLGCILYTLLVGKPP 225
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of 6-cyclohexylmethoxy-8-isopropyl-9h-
Purin-2-ylamine And Monomeric Cdk2
Length = 299
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 63 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMV 198
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 52/171 (30%), Positives = 75/171 (43%), Gaps = 9/171 (5%)
Query: 374 FDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNL 432
DS+PS + + L + S G LS + + LT L L+L N L F +L
Sbjct: 26 LDSVPSGIPADTEKLDLQSTGLATLSDA---TFRGLTKLTWLNLDYNQLQTLSAGVFDDL 82
Query: 433 RSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNK 492
L TL L N+L+ +LT LD LYL N L G L + L LN N+
Sbjct: 83 TELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQ 142
Query: 493 LSGSIPQSLGNLSNLVILYLYNNSLFDSIP----SELGNLRSLSMLSFAYN 539
L + L+NL L L N L S+P LG L+++++ ++
Sbjct: 143 LQSIPAGAFDKLTNLQTLSLSTNQL-QSVPHGAFDRLGKLQTITLFGNQFD 192
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 63/160 (39%)
Query: 169 SNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNS 228
++ + L L L+ + F L L+ L+L YN+ +LT L TL L NN
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 229 LFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNL 288
L +L L L LG N+L LT L L L N L F L
Sbjct: 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL 154
Query: 289 RSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGS 328
+L L+L N+L + + L L T+ + N S
Sbjct: 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 69/167 (41%), Gaps = 26/167 (15%)
Query: 283 SEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXX 342
+ F L L+ LNL YN+L + +LT L TL + NN L+ S+P +
Sbjct: 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGV--------- 102
Query: 343 XXXXXXXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSI 401
+L+ L LYL N L S+PS + L L L L N+L
Sbjct: 103 --------------FDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQSIP 147
Query: 402 PHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGS 448
+ LTNL TL L N L F L L T++L N+ S
Sbjct: 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Query: 414 LDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSI 473
LDL L+ + F L L+ L+L YN+L +LT L L L +N L+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 474 PGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPS-ELGNLRSLS 532
G +L + L L N+L L+ L L L N L SIP+ L +L
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTNLQ 158
Query: 533 MLSFAYNKLSGSIPH 547
LS + N+L S+PH
Sbjct: 159 TLSLSTNQLQ-SVPH 172
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 167 NLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHN 226
+L+ L TL L +N L+ F +L L L LG N+ LT L L L+
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 227 NSLFDSIPS-ELGNLRSLSMLSLGYNKLSGSIPH-SLGNLTNLATLYLYENSLSGS 280
N L SIP+ L +L LSL N+L S+PH + L L T+ L+ N S
Sbjct: 141 NQL-QSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 56/136 (41%), Gaps = 2/136 (1%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+ L L+L N L F +L L L L N+ + +LT L LYL N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 228 SLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFG 286
L S+PS + L L L L N+L + LTNL TL L N L F
Sbjct: 118 QL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 287 NLRSLSMLNLGYNKLN 302
L L + L N+ +
Sbjct: 177 RLGKLQTITLFGNQFD 192
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Query: 360 LSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDN 419
L+ L TL L +N L +L L L LG N+L LT L L L N
Sbjct: 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141
Query: 420 SLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPH-SLGNLTNLDALYLYDNSLSGS 472
L F L +L TLSL N+L S+PH + L L + L+ N S
Sbjct: 142 QLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 528 LRSLSMLSFAYNKL----SGSIPH--SLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQN 581
L L+ L+ YN+L +G LG L L++N + L L KL L N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 582 QLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQF 631
QL S L +L+ L L++N+L + +F L L L+LS NQ
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 56/143 (39%), Gaps = 2/143 (1%)
Query: 360 LSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDN 419
L+ L L L N L +L L L L N+L+ +LT L L L N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 420 SLSGSIPSE-FGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIG 478
L S+PS F L L L L N+L + LTNL L L N L G
Sbjct: 118 QLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176
Query: 479 NLRSISNLALNNNKLSGSIPQSL 501
L + + L N+ S ++L
Sbjct: 177 RLGKLQTITLFGNQFDCSRCETL 199
Score = 34.7 bits (78), Expect = 0.31, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 84/214 (39%), Gaps = 27/214 (12%)
Query: 537 AYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQ 596
+ + + IP LDL S + L L L L NQL + L +
Sbjct: 25 SLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTE 84
Query: 597 LEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLR 656
L L L++N+L++ F +L +L L L NQ + L L EL L+ N L
Sbjct: 85 LGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL- 143
Query: 657 EAIPSQICIMQXXXXXXXXXXXXVGLIPSCFEKMHGLLRIDISYNELQGPIPNSIAFRDA 716
++IP+ F+K+ L + +S N+LQ +P+ R
Sbjct: 144 QSIPA-----------------------GAFDKLTNLQTLSLSTNQLQS-VPHGAFDRLG 179
Query: 717 PIEALQ--GNKGLCGDVKGLPSCKTLKSNKQALR 748
++ + GN+ C + L + ++ N ++
Sbjct: 180 KLQTITLFGNQFDCSRCETLYLSQWIRENSNKVK 213
Score = 30.0 bits (66), Expect = 7.7, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 23 LSSWTLNNVTKTSPCAWVGIHCNRGGRVNS---INLTSIGLKGM----LHDFSFSSFPHL 75
LS T +TK + W+ + N+ +++ +LT +G G+ L F HL
Sbjct: 50 LSDATFRGLTKLT---WLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHL 106
Query: 76 AYLD---LWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQ 132
LD L NQL +++LK L L++N L+ L+TL L NQ
Sbjct: 107 TQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166
Query: 133 LNGSIPY 139
L S+P+
Sbjct: 167 LQ-SVPH 172
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + D G+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSP--------LPGEMTFQQEFLN 863
AT+ ++ IG G G+VYKA + SG VA+K P LP + L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 864 EVKALTEIRHRNIVKFYGFCS---------------HVRHSLAMILSNNAAAKDLGWTRR 908
++A H N+V+ C+ HV L L + A L
Sbjct: 67 RLEAF---EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL-DKAPPPGLPAETI 122
Query: 909 MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE 968
++++ L ++H +C IVHRD+ +N+L+ ++DFG+A+ + T
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTP 178
Query: 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 1006
+ T Y APE+ D++S G + E+ + K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 860 EFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN--------V 911
+ L EV L + H NI+K Y F R+ ++ RM +
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVI 141
Query: 912 IKGISDALSYMHNDCFPPIVHRDISSKNVLLD---FDNEAHVSDFGIAKFLKPDSSNWTE 968
IK + ++Y+H IVHRD+ +N+LL+ D + DFG++ + + E
Sbjct: 142 IKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKE 197
Query: 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 198 RLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + D G+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 55/301 (18%)
Query: 799 LTFEGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTF 857
L F+G E+ +D + +G+G G V K + SG+I AVK+ + + +
Sbjct: 20 LYFQGAXENFEV--KADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQE-- 75
Query: 858 QQEFLNEVKALTEIRHRNI-----VKFYGFCSHVRHSLAMI---LSNNAAAK------DL 903
Q+ L ++ +I R + V FYG + R I L + + K D
Sbjct: 76 QKRLLXDL----DISXRTVDCPFTVTFYG--ALFREGDVWICXELXDTSLDKFYKQVIDK 129
Query: 904 GWTRRMNVIKGIS----DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959
G T +++ I+ AL ++H+ ++HRD+ NVL++ + DFGI+ +L
Sbjct: 130 GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYL 187
Query: 960 KPDSSNWTELAGTYGYVAPEL--------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 1011
D + + AG Y APE Y++ K D++S G+ +E+ + P D
Sbjct: 188 VDDVAKDID-AGCKPYXAPERINPELNQKGYSV----KSDIWSLGITXIELAILRFPYD- 241
Query: 1012 IXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS-IVEVAISCLDENPESRPTMPKVS 1070
L ++E P+LP DK + V+ CL +N + RPT P++
Sbjct: 242 --SWGTPFQQLKQVVEEP-SPQLPA------DKFSAEFVDFTSQCLKKNSKERPTYPELX 292
Query: 1071 Q 1071
Q
Sbjct: 293 Q 293
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 16/194 (8%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V+K +G+IVA+KKF + ++ L E++ L +++H N+V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLES-EDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 882 -FCSHVRHSLAMILSNNAAAKDLGWTRR---MNVIKGIS----DALSYMH-NDCFPPIVH 932
F R L ++ +L +R +++K I+ A+++ H ++C +H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC----IH 125
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTEKCD 991
RD+ +N+L+ + + DFG A+ L S + + T Y +PEL + D
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVD 185
Query: 992 VYSFGVLALEVIKG 1005
V++ G + E++ G
Sbjct: 186 VWAIGCVFAELLSG 199
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 13 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 69
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 239
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 240 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 36 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 92
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 152
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 153 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 262
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 263 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 303
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain With
4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 17 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 73
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 133
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 134 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 243
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 244 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 284
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 14 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 70
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 240
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 241 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 18 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 74
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 244
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 245 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 5 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 61
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 122 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 231
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 232 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With Amp-
Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 11 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 67
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 237
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 238 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 14 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 70
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 240
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 241 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 61 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 174
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 66
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 67 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMV 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 63 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efp
With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efq
With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With 3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 63 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 62 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With Cell
Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The Inhibitor
Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With 4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In Complex
With 4-[(6-amino-4-pyrimidinyl) Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2 (Cdk2)
In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-2-
Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2- Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar Study,
Crystal Structure In Complex With Cdk2, Selectivity, And
Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea (At9283),
A Multi-Targeted Kinase Inhibitor With Potent Aurora
Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole Type
Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole Type
Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole Type
Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 62 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G VA+K + Q+ F EV+ + + H NIVK +
Sbjct: 21 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEV 79
Query: 883 CSHVRHSLAMILSNNAAAKDLGWT---RRM------NVIKGISDALSYMHNDCFPPIVHR 933
+L +I+ + + + RM + + I A+ Y H IVHR
Sbjct: 80 I-ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHR 135
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + G+ Y APEL K + DV
Sbjct: 136 DLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYAAPELFQGKKYDGPEVDV 194
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 195 WSLGVILYTLVSGSLPFD 212
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 69
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 70 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMV 205
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 13 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 69
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 239
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 240 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 15 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 71
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 241
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 242 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 18/165 (10%)
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRR--------- 908
+++FL E + + H N+V G + + + +I A D + R+
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALD-AFLRKHDGQFTVIQ 146
Query: 909 -MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD-SSNW 966
+ +++GI+ + Y+ + + VHRD++++N+L++ + VSDFG+++ ++ D + +
Sbjct: 147 LVGMLRGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVY 203
Query: 967 TELAGTYG--YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
T G + APE K T DV+S+G++ EV+ G+ P
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 31/201 (15%)
Query: 827 GQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
G+G K EL +GE VAVK G + E++ L + H NIVK
Sbjct: 30 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--ADLKKEIEILRNLYHENIVK 87
Query: 879 FYGFCSH-------------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHND 925
+ G C+ SL L N +L +++ I + Y+ +
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGSR 145
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAY 982
+ VHRD++++NVL++ +++ + DFG+ K ++ D T + + APE
Sbjct: 146 QY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 983 TMKVTEKCDVYSFGVLALEVI 1003
K DV+SFGV E++
Sbjct: 203 QSKFYIASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 31/201 (15%)
Query: 827 GQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
G+G K EL +GE VAVK G + E++ L + H NIVK
Sbjct: 18 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--ADLKKEIEILRNLYHENIVK 75
Query: 879 FYGFCSH-------------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHND 925
+ G C+ SL L N +L +++ I + Y+ +
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLGSR 133
Query: 926 CFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT---ELAGTYGYVAPELAY 982
+ VHRD++++NVL++ +++ + DFG+ K ++ D T + + APE
Sbjct: 134 QY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 983 TMKVTEKCDVYSFGVLALEVI 1003
K DV+SFGV E++
Sbjct: 191 QSKFYIASDVWSFGVTLHELL 211
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 35/205 (17%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV-- 877
+G G GSV Y A L + VAVKK P + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 878 -KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--GISD------------ALSYM 922
+ + + + L DL N++K +SD L Y+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLN-----NIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ I+HRD+ NV ++ D+E + DFG+A+ + + + T Y APE+
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV---ATRWYRAPEIML 201
Query: 983 T-MKVTEKCDVYSFGVLALEVIKGK 1006
M + D++S G + E+++GK
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK----G 914
NIV+ Y F S +V ++ + + + AK T + +K
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TLPVIYVKLYMYQ 130
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTY 973
+ +L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y
Sbjct: 131 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 974 GYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
Y APEL + T DV+S G + E++ G+
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of 8-Anilino-1-Naphthalene
Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 69
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 70 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMV 205
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 854 EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV-- 911
E +E + E + + ++ + IV+ G C L M ++ +R +
Sbjct: 376 EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPV 435
Query: 912 ------IKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965
+ +S + Y+ F VHR+++++NVLL + A +SDFG++K L D S
Sbjct: 436 SNVAELLHQVSMGMKYLEEKNF---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492
Query: 966 WTEL-AGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 1008
+T AG + + APE K + + DV+S+GV E + G+ P
Sbjct: 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Inhibitor 7d
Length = 350
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK----G 914
NIV+ Y F S +V ++ + + + AK T + +K
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TLPVIYVKLYMYQ 130
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTY 973
+ +L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y
Sbjct: 131 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 974 GYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
Y APEL + T DV+S G + E++ G+
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 77
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK----G 914
NIV+ Y F S +V ++ + + + AK T + +K
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TLPVIYVKLYMYQ 134
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTY 973
+ +L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y
Sbjct: 135 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
Query: 974 GYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
Y APEL + T DV+S G + E++ G+
Sbjct: 192 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK----G 914
NIV+ Y F S +V ++ + + + AK T + +K
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQ---TLPVIYVKLYMYQ 130
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTY 973
+ +L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y
Sbjct: 131 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 974 GYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
Y APEL + T DV+S G + E++ G+
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 35/205 (17%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV-- 877
+G G GSV Y A L VAVKK P + ++ + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 878 -KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--GISD------------ALSYM 922
+ + + + L DL N++K +SD L Y+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLN-----NIVKCQALSDEHVQFLVYQLLRGLKYI 147
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ I+HRD+ NV ++ D+E + DFG+A+ + + + T Y APE+
Sbjct: 148 HS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV---ATRWYRAPEIML 201
Query: 983 T-MKVTEKCDVYSFGVLALEVIKGK 1006
M + D++S G + E+++GK
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 74
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK----G 914
NIV+ Y F S +V ++ + + + AK T + +K
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TLPVIYVKLYMYQ 131
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTY 973
+ +L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y
Sbjct: 132 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
Query: 974 GYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
Y APEL + T DV+S G + E++ G+
Sbjct: 189 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G VAVK + Q+ F EV+ + + H NIVK +
Sbjct: 24 GKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEV 82
Query: 883 CSHVRHSLAMILSNNAAAKDLGWT---RRMN------VIKGISDALSYMHNDCFPPIVHR 933
+L +++ + + + RM + I A+ Y H IVHR
Sbjct: 83 I-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY---IVHR 138
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + + G+ Y APEL K + DV
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 197
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 198 WSLGVILYTLVSGSLPFD 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G+ VAVK + Q+ F EV+ + + H NIVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 883 CSHVRHSLAMILSNNAAAKDLGWT---RRMN------VIKGISDALSYMHNDCFPPIVHR 933
+L +++ + + + RM + I A+ Y H IVHR
Sbjct: 82 I-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + + G+ Y APEL K + DV
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 197 WSLGVILYTLVSGSLPFD 214
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G GSV A + +G VAVKK P + ++ + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 882 FCSHVR------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ R H + L+N + L +I I L Y+H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 145
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTE 988
I+HRD+ N+ ++ D E + D G+A+ + + + T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV---ATRWYRAPEIMLNWMHYNQ 202
Query: 989 KCDVYSFGVLALEVIKGK 1006
D++S G + E++ G+
Sbjct: 203 TVDIWSVGCIMAELLTGR 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G+ VAVK + Q+ F EV+ + + H NIVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 883 CSHVRHSLAMILSNNAAAKDLGWT---RRMN------VIKGISDALSYMHNDCFPPIVHR 933
+L +++ + + + RM + I A+ Y H IVHR
Sbjct: 82 I-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + + G+ Y APEL K + DV
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 197 WSLGVILYTLVSGSLPFD 214
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase In
Complex With An Mk-2461 Analog
Length = 307
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 90
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 144
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSS--NWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + K S N T
Sbjct: 145 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G VA+K + Q+ F EV+ + + H NIVK +
Sbjct: 24 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEV 82
Query: 883 CSHVRHSLAMILSNNAAAKDLGWT---RRM------NVIKGISDALSYMHNDCFPPIVHR 933
+L +I+ + + + RM + + I A+ Y H IVHR
Sbjct: 83 I-ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHR 138
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + G Y APEL K + DV
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPELFQGKKYDGPEVDV 197
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 198 WSLGVILYTLVSGSLPFD 215
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK-FLKPDSSNWTELAGTY 973
IS AL+Y+H I++RD+ NVLLD + ++D+G+ K L+P + + GT
Sbjct: 119 ISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTP 174
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDE-MLDP 1032
Y+APE+ D ++ GVL E++ G+ P D + N L + +L+
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 234
Query: 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESR 1063
++ P + + V S L+++P+ R
Sbjct: 235 QIRIPRSLS----VKAASVLKSFLNKDPKER 261
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ + +DL + + GI L
Sbjct: 63 NHPNIVKLLDVI-HTENKLYLVFEH--VDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+ D IG G G VY+A+L SGE+VA+KK L G+ F+ E++ + ++ H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGK-AFKNR---ELQIMRKLDHCN 74
Query: 876 IVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK----GI 915
IV+ Y F S +V ++ + + + AK T + +K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TLPVIYVKLYMYQL 131
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYG 974
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 975 YVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
Y APEL + T DV+S G + E++ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212 Interactions
Length = 341
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 815 NDFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V+K + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM----------NVIKGISDALSY 921
IV FYG F S S+ M + + + L R+ VIKG L+Y
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTY 119
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 175
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + D++S G+ +E+ G++P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4858061 And Mgatp
Length = 307
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 815 NDFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V+K + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM----------NVIKGISDALSY 921
IV FYG F S S+ M + + + L R+ VIKG L+Y
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTY 119
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 175
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + D++S G+ +E+ G++P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 815 NDFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V+K + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM----------NVIKGISDALSY 921
IV FYG F S S+ M + + + L R+ VIKG L+Y
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTY 119
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 175
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + D++S G+ +E+ G++P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 815 NDFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V+K + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM----------NVIKGISDALSY 921
IV FYG F S S+ M + + + L R+ VIKG L+Y
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTY 119
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 175
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + D++S G+ +E+ G++P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of
C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain Of
C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
(6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 35 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 88
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 142
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS----SNWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + N T
Sbjct: 143 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
Length = 333
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 815 NDFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V+K + SG ++A K H L + + + + E++ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 63
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM----------NVIKGISDALSY 921
IV FYG F S S+ M + + + L R+ VIKG L+Y
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTY 119
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 175
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + D++S G+ +E+ G++P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+ D IG G G VY+A+L SGE+VA+KK L G+ F+ E++ + ++ H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGK-AFKNR---ELQIMRKLDHCN 74
Query: 876 IVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK----GI 915
IV+ Y F S +V ++ + + + AK T + +K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TLPVIYVKLYMYQL 131
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYG 974
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 975 YVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
Y APEL + T DV+S G + E++ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolotriazine Based Inhibitor
Length = 373
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 55/273 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 97 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 150
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 204
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDS-SNWTELAGTYG 974
+ ++ + F VHRD++++N +LD V+DFG+A+ + + DS N T
Sbjct: 205 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T K T K DV+SFGVL E++ +G P + +I + + R
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-------TFDITVYLLQGRR 314
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTM 1066
L P D L EV + C E RP+
Sbjct: 315 LLQPE-YCPDPL---YEVMLKCWHPKAEMRPSF 343
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 46/229 (20%)
Query: 804 KIVYEEIIRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKK---FHSPLPGEMTFQQ 859
+IVY ++DF + +G+G G V A +GEIVA+KK F PL F
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-----FAL 54
Query: 860 EFLNEVKALTEIRHRNIV---------------KFYGFCSHVRHSLAMILSNNAAAKDLG 904
L E+K L +H NI+ + Y ++ L ++S + D
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD-- 112
Query: 905 WTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS- 963
I A+ +H ++HRD+ N+L++ + + V DFG+A+ + +
Sbjct: 113 --HIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 964 ---------SNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEV 1002
S TE T Y APE+ T K + DV+S G + E+
Sbjct: 168 DNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV---- 877
+G G GSV + ++ SG +AVKK P + ++ + E++ L ++H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 878 --------KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
+ + V H + L+N + L +I I L Y+H+
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---AD 174
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA-----YTM 984
I+HRD+ N+ ++ D E + DFG+A+ + + + T Y APE+ Y M
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNM 231
Query: 985 KVTEKCDVYSFGVLALEVIKGK 1006
V D++S G + E++ G+
Sbjct: 232 TV----DIWSVGCIMAELLTGR 249
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1
Length = 302
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 89
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 143
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS----SNWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + N T
Sbjct: 144 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor
13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 90
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 144
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS----SNWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + N T
Sbjct: 145 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 91
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 145
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS----SNWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + N T
Sbjct: 146 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 46/229 (20%)
Query: 804 KIVYEEIIRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKK---FHSPLPGEMTFQQ 859
+IVY ++DF + +G+G G V A +GEIVA+KK F PL F
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-----FAL 54
Query: 860 EFLNEVKALTEIRHRNIV---------------KFYGFCSHVRHSLAMILSNNAAAKDLG 904
L E+K L +H NI+ + Y ++ L ++S + D
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD-- 112
Query: 905 WTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS- 963
I A+ +H ++HRD+ N+L++ + + V DFG+A+ + +
Sbjct: 113 --HIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 964 ---------SNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEV 1002
S TE T Y APE+ T K + DV+S G + E+
Sbjct: 168 DNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 36/259 (13%)
Query: 823 IGKGGQGSVYK------AELASGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHRN 875
+GKGG ++ E+ +G+IV P Q+E ++ E+ + H++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 76
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+V F+GF ++ L + K L ++ I Y+H +
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-- 134
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D E + DFG+A ++ D L GT Y+APE+ +
Sbjct: 135 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 988 EKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+S G + ++ GK P L I +E P+ P V LI
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQ 247
Query: 1048 IVEVAISCLDENPESRPTM 1066
L +P +RPT+
Sbjct: 248 ------KMLQTDPTARPTI 260
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F + G G+VYK + GE V A+K+ + +E L+E
Sbjct: 18 ILKET-EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 74
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 244
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 245 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 91
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 145
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS----SNWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + N T
Sbjct: 146 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 33 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 86
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 140
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS----SNWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + N T
Sbjct: 141 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK-FLKPDSSNWTELAGTY 973
IS AL+Y+H I++RD+ NVLLD + ++D+G+ K L+P + + GT
Sbjct: 115 ISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTP 170
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDE-MLDP 1032
Y+APE+ D ++ GVL E++ G+ P D + N L + +L+
Sbjct: 171 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 230
Query: 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESR 1063
++ P + + V S L+++P+ R
Sbjct: 231 QIRIPRSLS----VKAASVLKSFLNKDPKER 257
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
Length = 350
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+ D IG G G VY+A+L SGE+VA+KK L G+ F+ E++ + ++ H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGK-AFKNR---ELQIMRKLDHCN 74
Query: 876 IVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK----GI 915
IV+ Y F S +V ++ + + + AK T + +K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQ---TLPVIYVKLYMYQL 131
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTYG 974
+L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 975 YVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
Y APEL + T DV+S G + E++ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 823 IGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+GKGG Y+ ++ + E+ A K + + +++ E+ + + ++V F+G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 882 F-------------CSHVRHSLAMILSNNAAAKDLGWTRRM-NVIKGISDALSYMHNDCF 927
F C R SL + A + M I+G+ Y+HN+
Sbjct: 110 FFEDDDFVYVVLEICR--RRSLLELHKRRKAVTEPEARYFMRQTIQGVQ----YLHNN-- 161
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D + + DFG+A ++ D L GT Y+APE+ +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 988 EKCDVYSFGVLALEVIKGKHP 1008
+ D++S G + ++ GK P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Leucettine L4
Length = 350
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHR 874
+ D IG G G VY+A+L SGE+VA+KK + + F N E++ + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKLDHC 73
Query: 875 NIVKF-YGFCS---------------HVRHSLAMILSNNAAAKDLGWTRRMNVIK----G 914
NIV+ Y F S +V ++ + + + AK T + +K
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TLPVIYVKLYMYQ 130
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGIAKFLKPDSSNWTELAGTY 973
+ +L+Y+H+ I HRDI +N+LLD D + DFG AK L N + + Y
Sbjct: 131 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 974 GYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
Y APEL + T DV+S G + E++ G+
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHE 65
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 30 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 83
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 137
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS----SNWTELAGTYG 974
+ Y+ + F VHRD++++N +LD V+DFG+A+ + N T
Sbjct: 138 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 823 IGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+GKGG Y+ ++ + E+ A K + + +++ E+ + + ++V F+G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 882 F-------------CSHVRHSLAMILSNNAAAKDLGWTRRM-NVIKGISDALSYMHNDCF 927
F C R SL + A + M I+G+ Y+HN+
Sbjct: 110 FFEDDDFVYVVLEICR--RRSLLELHKRRKAVTEPEARYFMRQTIQGVQ----YLHNN-- 161
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D + + DFG+A ++ D L GT Y+APE+ +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 988 EKCDVYSFGVLALEVIKGKHP 1008
+ D++S G + ++ GK P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G+ VAVK + Q+ F EV+ + + H NIVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 883 CSHVRHSLAMILSNNAAAKDLGWT---RRMN------VIKGISDALSYMHNDCFPPIVHR 933
+L +++ + + + RM + I A+ Y H IVHR
Sbjct: 82 I-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + + G Y APEL K + DV
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDAFCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 197 WSLGVILYTLVSGSLPFD 214
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 815 NDFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V+K + SG ++A K H L + + + + E++ L E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 82
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM----------NVIKGISDALSY 921
IV FYG F S S+ M + + + L R+ VIKG L+Y
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG----LTY 138
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 139 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 194
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + D++S G+ +E+ G++P
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 35/205 (17%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
+G G GSV Y A L + VAVKK P + ++ + E++ L ++H N++
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 84
Query: 880 ---YGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK--GISD------------ALSYM 922
+ + + + L DL N++K +SD L Y+
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLN-----NIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ I+HRD+ NV ++ D E + DFG+A+ + + + T Y APE+
Sbjct: 140 HS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV---ATRWYRAPEIML 193
Query: 983 T-MKVTEKCDVYSFGVLALEVIKGK 1006
M + D++S G + E+++GK
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 36/259 (13%)
Query: 823 IGKGGQGSVYK------AELASGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHRN 875
+GKGG ++ E+ +G+IV P Q+E ++ E+ + H++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 82
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+V F+GF ++ L + K L ++ I Y+H +
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-- 140
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D E + DFG+A ++ D L GT Y+APE+ +
Sbjct: 141 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 988 EKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+S G + ++ GK P L I +E P+ P V LI
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQ 253
Query: 1048 IVEVAISCLDENPESRPTM 1066
L +P +RPT+
Sbjct: 254 ------KMLQTDPTARPTI 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 36/259 (13%)
Query: 823 IGKGGQGSVYK------AELASGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHRN 875
+GKGG ++ E+ +G+IV P Q+E ++ E+ + H++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 78
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+V F+GF ++ L + K L ++ I Y+H +
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-- 136
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D E + DFG+A ++ D L GT Y+APE+ +
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 988 EKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+S G + ++ GK P L I +E P+ P V LI
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQ 249
Query: 1048 IVEVAISCLDENPESRPTM 1066
L +P +RPT+
Sbjct: 250 ------KMLQTDPTARPTI 262
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 36/259 (13%)
Query: 823 IGKGGQGSVYK------AELASGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHRN 875
+GKGG ++ E+ +G+IV P Q+E ++ E+ + H++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 78
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+V F+GF ++ L + K L ++ I Y+H +
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-- 136
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D E + DFG+A ++ D L GT Y+APE+ +
Sbjct: 137 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 988 EKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+S G + ++ GK P L I +E P+ P V LI
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQ 249
Query: 1048 IVEVAISCLDENPESRPTM 1066
L +P +RPT+
Sbjct: 250 ------KMLQTDPTARPTI 262
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 977
AL ++H+ I++RD+ +N+LLD + ++DFG++K GT Y+A
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 978 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
PE+ T+ D +SFGVL E++ G P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 823 IGKGGQGSVY--KAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY 880
+G G G V K +L E A+K + L+EV L ++ H NI+K Y
Sbjct: 29 LGSGAYGEVLLCKDKLTGAE-RAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 881 GFCSHVR-HSLAMILSNNAAAKDLGWTRR-------MNVIKGISDALSYMHNDCFPPIVH 932
F R + L M + D R+ ++K + +Y+H IVH
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH---NIVH 144
Query: 933 RDISSKNVLLDF---DNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
RD+ +N+LL+ D + DFG++ + E GT Y+APE+ K EK
Sbjct: 145 RDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERLGTAYYIAPEV-LRKKYDEK 202
Query: 990 CDVYSFGVLALEVIKGKHP 1008
CDV+S GV+ ++ G P
Sbjct: 203 CDVWSCGVILYILLCGYPP 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 977
AL ++H+ I++RD+ +N+LLD + ++DFG++K GT Y+A
Sbjct: 139 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 978 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
PE+ T+ D +SFGVL E++ G P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 977
AL ++H+ I++RD+ +N+LLD + ++DFG++K GT Y+A
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 978 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
PE+ T+ D +SFGVL E++ G P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG 974
IS L ++H I++RD+ NV+LD + ++DFG+ K D E GT
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPD 185
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 1010
Y+APE+ + D +++GVL E++ G+ P D
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 815 NDFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V+K + SG ++A K H L + + + + E++ L E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 125
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM----------NVIKGISDALSY 921
IV FYG F S S+ M + + + L R+ VIKG++ L
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT-YLRE 184
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
H I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 185 KHK-----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 237
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + D++S G+ +E+ G++P
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVK---KFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G+V+K + GE + + K G +FQ + + A+ + H +IV+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA-VTDHMLAIGSLDHAHIVR 79
Query: 879 FYGFCSHVRHSLAMILSNNAAAKDLGWTRR----------MNVIKGISDALSYMHNDCFP 928
G C SL ++ L R+ +N I+ + Y+
Sbjct: 80 LLGLCPG--SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH--- 134
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKV 986
+VHR+++++NVLL ++ V+DFG+A L PD ++E ++A E + K
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 987 TEKCDVYSFGVLALEVIK-GKHP 1008
T + DV+S+GV E++ G P
Sbjct: 195 THQSDVWSYGVTVWELMTFGAEP 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G+ VAV+ + Q+ F EV+ + + H NIVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 81
Query: 883 CSHVRHSLAMILSNNAAAKDLGWT---RRMN------VIKGISDALSYMHNDCFPPIVHR 933
+L +++ + + + RM + I A+ Y H IVHR
Sbjct: 82 I-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + + G+ Y APEL K + DV
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 197 WSLGVILYTLVSGSLPFD 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINAMLNHE 65
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 795 LLSVLTFEGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGE 854
++ VL +GK + I TN IG G G V++A+L + VA+KK
Sbjct: 24 VIKVLASDGKTGEQREIAYTNC----KVIGNGSFGVVFQAKLVESDEVAIKKVLQ----- 74
Query: 855 MTFQQEFLN-EVKALTEIRHRNIVKFYGFCSH-------------VRHSLAMILSNNAAA 900
+ F N E++ + ++H N+V F + + + +
Sbjct: 75 ---DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHY 131
Query: 901 KDLGWTRRMNVIK----GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA-HVSDFGI 955
L T M +IK + +L+Y+H+ I HRDI +N+LLD + + DFG
Sbjct: 132 AKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGS 188
Query: 956 AKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 1006
AK L N + + Y Y APEL + T D++S G + E+++G+
Sbjct: 189 AKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 36/259 (13%)
Query: 823 IGKGGQGSVYK------AELASGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHRN 875
+GKGG ++ E+ +G+IV P Q+E ++ E+ + H++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 100
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+V F+GF ++ L + K L ++ I Y+H +
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-- 158
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D E + DFG+A ++ D L GT Y+APE+ +
Sbjct: 159 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 988 EKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+S G + ++ GK P L I +E P+ P V LI
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQ 271
Query: 1048 IVEVAISCLDENPESRPTM 1066
L +P +RPT+
Sbjct: 272 ------KMLQTDPTARPTI 284
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/282 (23%), Positives = 110/282 (39%), Gaps = 46/282 (16%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+V G C+ L +I LS +K + ++ K D L+ H C+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK---DFLTLEHLICY 149
Query: 928 P-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAGT 972
+HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRA 268
Query: 1032 PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 269 PDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 36/259 (13%)
Query: 823 IGKGGQGSVYK------AELASGEIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEIRHRN 875
+GKGG ++ E+ +G+IV P Q+E ++ E+ + H++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP------HQREKMSMEISIHRSLAHQH 102
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+V F+GF ++ L + K L ++ I Y+H +
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-- 160
Query: 928 PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
++HRD+ N+ L+ D E + DFG+A ++ D L GT Y+APE+ +
Sbjct: 161 -RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 988 EKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+S G + ++ GK P L I +E P+ P V LI
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPP---FETSCLKETYLRIKKNEYSIPKHINP---VAASLIQ 273
Query: 1048 IVEVAISCLDENPESRPTM 1066
L +P +RPT+
Sbjct: 274 ------KMLQTDPTARPTI 286
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
Length = 344
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVK---KFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878
+G G G+V+K + GE + + K G +FQ + + A+ + H +IV+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA-VTDHMLAIGSLDHAHIVR 97
Query: 879 FYGFCSHVRHSLAMILSNNAAAKDLGWTRR----------MNVIKGISDALSYMHNDCFP 928
G C SL ++ L R+ +N I+ + Y+
Sbjct: 98 LLGLCPG--SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH--- 152
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKV 986
+VHR+++++NVLL ++ V+DFG+A L PD ++E ++A E + K
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 987 TEKCDVYSFGVLALEVIK-GKHP 1008
T + DV+S+GV E++ G P
Sbjct: 213 THQSDVWSYGVTVWELMTFGAEP 235
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 63
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 64 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1
Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human Chk1
Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 837 ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH---SLAMI 893
+GE+VAVK ++ + + E++ L + H +IVK+ G C L M
Sbjct: 35 GTGEMVAVKALKEGCGPQL--RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 92
Query: 894 LSNNAAAKD------LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE 947
+ +D +G + + + I + ++Y+H + +HR ++++NVLLD D
Sbjct: 93 YVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDNDRL 149
Query: 948 AHVSDFGIAKFLKPDSSNWTEL-----AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+ DFG+AK + P+ + + + + Y APE K DV+SFGV E+
Sbjct: 150 VKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYEL 207
Query: 1003 I 1003
+
Sbjct: 208 L 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 837 ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH---SLAMI 893
+GE+VAVK ++ + + E++ L + H +IVK+ G C L M
Sbjct: 36 GTGEMVAVKALKEGCGPQL--RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 93
Query: 894 LSNNAAAKD------LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE 947
+ +D +G + + + I + ++Y+H + +HR ++++NVLLD D
Sbjct: 94 YVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLDNDRL 150
Query: 948 AHVSDFGIAKFLKPDSSNWTEL-----AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+ DFG+AK + P+ + + + + Y APE K DV+SFGV E+
Sbjct: 151 VKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYEL 208
Query: 1003 I 1003
+
Sbjct: 209 L 209
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 91
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 145
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDS-SNWTELAGTYG 974
+ ++ + F VHRD++++N +LD V+DFG+A+ + + DS N T
Sbjct: 146 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 46/229 (20%)
Query: 804 KIVYEEIIRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKK---FHSPLPGEMTFQQ 859
+IVY ++DF + +G+G G V A +GEIVA+KK F PL F
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-----FAL 54
Query: 860 EFLNEVKALTEIRHRNIV---------------KFYGFCSHVRHSLAMILSNNAAAKDLG 904
L E+K L +H NI+ + Y ++ L ++S + D
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD-- 112
Query: 905 WTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964
I A+ +H ++HRD+ N+L++ + + V DFG+A+ + ++
Sbjct: 113 --HIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 965 NWTELAG----------TYGYVAPELAYT-MKVTEKCDVYSFGVLALEV 1002
+ +E G T Y APE+ T K + DV+S G + E+
Sbjct: 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepat
Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 91
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 145
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDS-SNWTELAGTYG 974
+ ++ + F VHRD++++N +LD V+DFG+A+ + + DS N T
Sbjct: 146 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 18 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 74
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 244
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 245 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 11 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 67
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 237
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 238 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 89
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 143
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDS-SNWTELAGTYG 974
+ ++ + F VHRD++++N +LD V+DFG+A+ + + DS N T
Sbjct: 144 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 85 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 140
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 201 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 249
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 250 LMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 132
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 241
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 132
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 241
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 138
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 199 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 247
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 248 LMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 133
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 194 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 242
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 243 LMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 65
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 66 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D+D +G+G G V A + E VAVK + + + E+ + H
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHE 64
Query: 875 NIVKFYGFCSHVRH-SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFP----- 928
N+VKFYG H R ++ + + +L ++ DA + H
Sbjct: 65 NVVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 929 --PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTM 984
I HRDI +N+LLD + +SDFG+A + ++ ++ GT YVAPEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 985 KV-TEKCDVYSFGVLALEVIKGKHPRD 1010
+ E DV+S G++ ++ G+ P D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 134
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 195 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 243
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 244 LMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 86 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 141
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 202 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 250
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 251 LMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVT 987
+HRD++++N+LL +N + DFG+A+ + PD + ++APE + +
Sbjct: 220 CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYS 279
Query: 988 EKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
K DV+S+GVL E+ G P + L + M P TP
Sbjct: 280 TKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGM-RMRAPEYSTP--------- 329
Query: 1047 SIVEVAISCLDENPESRPTMPKVSQLL 1073
I ++ + C +P+ RP ++ + L
Sbjct: 330 EIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+GKG G V K + + K + + L EV+ L ++ H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 883 C--SHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIVHRD 934
S + + + + ++ +R + +IK + ++YMH IVHRD
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRD 146
Query: 935 ISSKNVLLDF---DNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
+ +N+LL+ D + + DFG++ + ++ + GT Y+APE+ EKCD
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRGT-YDEKCD 204
Query: 992 VYSFGVLALEVIKGKHP 1008
V+S GV+ ++ G P
Sbjct: 205 VWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+GKG G V K + + K + + L EV+ L ++ H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 883 C--SHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIVHRD 934
S + + + + ++ +R + +IK + ++YMH IVHRD
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRD 146
Query: 935 ISSKNVLLDF---DNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
+ +N+LL+ D + + DFG++ + ++ + GT Y+APE+ EKCD
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRIGTAYYIAPEVLRGT-YDEKCD 204
Query: 992 VYSFGVLALEVIKGKHP 1008
V+S GV+ ++ G P
Sbjct: 205 VWSAGVILYILLSGTPP 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 910 NVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969
++IKGI Y+H + I+HRDI N+L+ D ++DFG++ K + +
Sbjct: 145 DLIKGIE----YLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 970 AGTYGYVAPE-LAYTMKV--TEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIAL 1026
GT ++APE L+ T K+ + DV++ GV + G+ P L+ I
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP---FMDERIMCLHSKIKS 254
Query: 1027 DEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
+ P P I +D + ++ LD+NPESR +P++
Sbjct: 255 QALEFPDQPD---IAED----LKDLITRMLDKNPESRIVVPEI 290
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 63 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound
1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a And
Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 815 NDFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+DF+ +G G G V+K + SG ++A K H L + + + + E++ L E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNS 90
Query: 874 RNIVKFYG-FCSHVRHSLAMI-LSNNAAAKDLGWTRRM----------NVIKGISDALSY 921
IV FYG F S S+ M + + + L R+ VIKG++ L
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT-YLRE 149
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
H I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 150 KHK-----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERL 202
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + D++S G+ +E+ G++P
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+GS K +LA +G+ VA+K + + + Q E+ L +RH +I+K Y
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 76
Query: 883 CSHVRHSLAMI------LSNNAAAKD-LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDI 935
+ +I L + +D + + I A+ Y H IVHRD+
Sbjct: 77 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDL 133
Query: 936 SSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKCDVYS 994
+N+LLD ++DFG++ + D + G+ Y APE ++ + + DV+S
Sbjct: 134 KPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 192
Query: 995 FGVLALEVIKGKHPRD 1010
GV+ ++ + P D
Sbjct: 193 CGVILYVMLCRRLPFD 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 60 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+GS K +LA +G+ VA+K + + + Q E+ L +RH +I+K Y
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 72
Query: 883 CSHVRHSLAMI------LSNNAAAKD-LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDI 935
+ +I L + +D + + I A+ Y H IVHRD+
Sbjct: 73 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDL 129
Query: 936 SSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKCDVYS 994
+N+LLD ++DFG++ + D + G+ Y APE ++ + + DV+S
Sbjct: 130 KPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 188
Query: 995 FGVLALEVIKGKHPRD 1010
GV+ ++ + P D
Sbjct: 189 CGVILYVMLCRRLPFD 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 62 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 60 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
Length = 299
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 60 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+GS K +LA +G+ VA+K + + + Q E+ L +RH +I+K Y
Sbjct: 22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 81
Query: 883 CSHVRHSLAMI------LSNNAAAKD-LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDI 935
+ +I L + +D + + I A+ Y H IVHRD+
Sbjct: 82 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDL 138
Query: 936 SSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKCDVYS 994
+N+LLD ++DFG++ + D + G+ Y APE ++ + + DV+S
Sbjct: 139 KPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 197
Query: 995 FGVLALEVIKGKHPRD 1010
GV+ ++ + P D
Sbjct: 198 CGVILYVMLCRRLPFD 213
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 60 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 63
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 64 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE+
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap) In
Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
Length = 298
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 62 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE+
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF-LKPDSSNWTELAGTY 973
IS AL+Y+H I++RD+ NVLLD + ++D+G+ K L+P + T GT
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTP 217
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFI 1012
Y+APE+ D ++ GVL E++ G+ P D +
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 92
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 146
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDS-SNWTELAGTYG 974
+ ++ + F VHRD++++N +LD V+DFG+A+ + + DS N T
Sbjct: 147 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+GS K +LA +G+ VA+K + + + Q E+ L +RH +I+K Y
Sbjct: 23 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 82
Query: 883 CSHVRHSLAMI------LSNNAAAKD-LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDI 935
+ +I L + +D + + I A+ Y H IVHRD+
Sbjct: 83 IKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDL 139
Query: 936 SSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKCDVYS 994
+N+LLD ++DFG++ + D + G+ Y APE ++ + + DV+S
Sbjct: 140 KPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWS 198
Query: 995 FGVLALEVIKGKHPRD 1010
GV+ ++ + P D
Sbjct: 199 CGVILYVMLCRRLPFD 214
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 61 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 92
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 146
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDS-SNWTELAGTYG 974
+ ++ + F VHRD++++N +LD V+DFG+A+ + + DS N T
Sbjct: 147 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Query: 863 NEVKALTEIRHRNIVKFYG-FCSHVRHSLAMILSNNAAAKDLGWTRRMN-------VIKG 914
NE+ L +I+H NIV + S + L M L + D R + VI+
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLL---DFDNEAHVSDFGIAKFLKPDSSNWTELAG 971
+ A+ Y+H + IVHRD+ +N+L + +++ ++DFG++K + + G
Sbjct: 115 VLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTACG 169
Query: 972 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
T GYVAPE+ ++ D +S GV+ ++ G P
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
Length = 296
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+KK E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 62 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE+
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 16/148 (10%)
Query: 862 LNEVKALTEIRHRNIVKFYGFCSHVR-HSLAMILSNNAAAKDLGWTRR-------MNVIK 913
L+EV L ++ H NI+K Y F R + L M + D R+ ++K
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 914 GISDALSYMHNDCFPPIVHRDISSKNVLLD---FDNEAHVSDFGIAKFLKPDSSNWTELA 970
+ +Y+H IVHRD+ +N+LL+ D + DFG++ + E
Sbjct: 112 QVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKERL 167
Query: 971 GTYGYVAPELAYTMKVTEKCDVYSFGVL 998
GT Y+APE+ K EKCDV+S GV+
Sbjct: 168 GTAYYIAPEV-LRKKYDEKCDVWSCGVI 194
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 110/264 (41%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 132
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ E A + APE T K D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 241
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 43/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLP--------GEMTFQQEFLNEVKALTEIRHR 874
IG+G G VY L + KK H + GE++ +FL E + + H
Sbjct: 43 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHP 96
Query: 875 NIVKFYGFCSHVRHSLAMIL---------------SNNAAAKDL-GWTRRMNVIKGISDA 918
N++ G C S ++L ++N KDL G+ + V KG
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKG---- 150
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDS-SNWTELAGTYG 974
+ ++ + F VHRD++++N +LD V+DFG+A+ + + DS N T
Sbjct: 151 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++A E T K T K DV+SFGVL E++ P
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 63 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 62 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 63 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
Length = 299
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 61 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+ K E + E+ L E+ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNHP 62
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 63 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
+F IG+G G VYKA +GE+VA+ K E + E+ L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DALSYM 922
NIVK H + L ++ +DL + + GI L++
Sbjct: 62 NIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 923 HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 982
H+ ++HRD+ +N+L++ + ++DFG+A+ +T T Y APE+
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 983 TMK-VTEKCDVYSFGVLALEVI 1003
K + D++S G + E++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 62 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 119 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
DF + IG GG G V+KA+ G+ +K+ ++ EVKAL ++ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-------NEKAEREVKALAKLDHV 64
Query: 875 NIVKFYGFCSHVRHSLAMILSNNAAAK-----------DLG----WTRR----------- 908
NIV + G + N++ +K D G W +
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 909 MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE 968
+ + + I+ + Y+H+ +++RD+ N+ L + + DFG+ LK D
Sbjct: 125 LELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR-XR 180
Query: 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 1003
GT Y++PE + ++ D+Y+ G++ E++
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ + DL + + GI L
Sbjct: 61 NHPNIVKLLDVI-HTENKLYLVFE--FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 138
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 199 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 247
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 248 LMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 87 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 142
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 203 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 251
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 252 LMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 132
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 241
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 72 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 127
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 188 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 236
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 237 LMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 82 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 137
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
RD+ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 198 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 246
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 247 LMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 25/154 (16%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V+KA +G+ VA+KK E F L E+K L ++H N+V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIE 84
Query: 882 FC------------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
C H LA +LSN L +R V++ + + L Y+H
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIH 142
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
+ I+HRD+ + NVL+ D ++DFG+A+
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F + G G+VYK + GE V A+K+ + +E L+E
Sbjct: 18 ILKET-EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 74
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 244
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 245 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F + G G+VYK + GE V A+K+ + +E L+E
Sbjct: 11 ILKET-EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 67
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 237
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + +V+ + D P+ R + + S++ +
Sbjct: 238 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 25/154 (16%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V+KA +G+ VA+KK E F L E+K L ++H N+V
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIE 83
Query: 882 FC------------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
C H LA +LSN L +R V++ + + L Y+H
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIH 141
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
+ I+HRD+ + NVL+ D ++DFG+A+
Sbjct: 142 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 63
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 64 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 177
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 25/154 (16%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V+KA +G+ VA+KK E F L E+K L ++H N+V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIE 84
Query: 882 FC------------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
C H LA +LSN L +R V++ + + L Y+H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIH 142
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
+ I+HRD+ + NVL+ D ++DFG+A+
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 817 FDDEHC-----IGKGGQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLN 863
F++ H +GKG GSV EL +G +VAVK+ P + Q++F
Sbjct: 20 FEERHLKYISQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQR 73
Query: 864 EVKALTEIRHRNIVKFYGFC-SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYM 922
E++ L + IVK+ G R SL +++ + + +R S L Y
Sbjct: 74 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 133
Query: 923 HNDC-------FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG- 974
C VHRD++++N+L++ + ++DFG+AK L D +
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 975 --YVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+ APE + + DV+SFGV+ E+
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 817 FDDEHC-----IGKGGQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLN 863
F++ H +GKG GSV EL +G +VAVK+ P + Q++F
Sbjct: 8 FEERHLKYISQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQR 61
Query: 864 EVKALTEIRHRNIVKFYGFC-SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYM 922
E++ L + IVK+ G R SL +++ + + +R S L Y
Sbjct: 62 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 121
Query: 923 HNDC-------FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG- 974
C VHRD++++N+L++ + ++DFG+AK L D +
Sbjct: 122 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 975 --YVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+ APE + + DV+SFGV+ E+
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 21 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 77
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 137
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 138 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 247
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + + + + D P+ R + + S++ +
Sbjct: 248 LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 288
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 11 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 67
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 237
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + + + + D P+ R + + S++ +
Sbjct: 238 LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 14 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 70
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 240
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + + + + D P+ R + + S++ +
Sbjct: 241 LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 25/154 (16%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G V+KA +G+ VA+KK E F L E+K L ++H N+V
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIE 84
Query: 882 FC------------------SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
C H LA +LSN L +R V++ + + L Y+H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIH 142
Query: 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957
+ I+HRD+ + NVL+ D ++DFG+A+
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
Length = 301
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ + DL + + GI L
Sbjct: 63 NHPNIVKLLDVI-HTENKLYLVFE--FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 120 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 93/222 (41%), Gaps = 42/222 (18%)
Query: 808 EEIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVK 866
EE+ AT+ +G+G G V++ E +G AVKK + F+ E L
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-----FRAEELMACA 140
Query: 867 ALTEIRHRNIVKFYGFCSHVRH--------------SLAMILSNNAAAKDLGWTRRMNVI 912
LT R IV YG VR SL ++ + R + +
Sbjct: 141 GLTSPR---IVPLYGA---VREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYL 191
Query: 913 KGISDALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIAKFLKPDSSNWTELAG 971
+ L Y+H+ I+H D+ + NVLL D + A + DFG A L+PD + L G
Sbjct: 192 GQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 972 TY-----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y ++APE+ K DV+S + L ++ G HP
Sbjct: 249 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 13 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 69
Query: 865 VKALTEIRHRNIVKFYGFCSHVRHSLAM-------ILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C L M +L KD +G +N I+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 239
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + + + + D P+ R + + S++ +
Sbjct: 240 LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ + DL + + GI L
Sbjct: 62 NHPNIVKLLDVI-HTENKLYLVFE--FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 817 FDDEHC-----IGKGGQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLN 863
F++ H +GKG GSV EL +G +VAVK+ P + Q++F
Sbjct: 7 FEERHLKYISQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQR 60
Query: 864 EVKALTEIRHRNIVKFYGFC-SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYM 922
E++ L + IVK+ G R SL +++ + + +R S L Y
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 923 HNDC-------FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG- 974
C VHRD++++N+L++ + ++DFG+AK L D +
Sbjct: 121 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 975 --YVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+ APE + + DV+SFGV+ E+
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ +DL + + GI L
Sbjct: 60 NHPNIVKLLDVI-HTENKLYLVFE--FLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 117 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
Length = 302
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
+ +F IG+G G VYKA +GE+VA+KK E + E+ L E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 872 RHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGIS------------DAL 919
H NIVK H + L ++ + DL + + GI L
Sbjct: 63 NHPNIVKLLDVI-HTENKLYLVFE--FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
++ H+ ++HRD+ +N+L++ + ++DFG+A+ + T Y APE
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 980 LAYTMK-VTEKCDVYSFGVLALEVI 1003
+ K + D++S G + E++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF-LKPDSSNWTELAGTY 973
IS AL+Y+H I++RD+ NVLLD + ++D+G+ K L+P + + GT
Sbjct: 130 ISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTP 185
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFI 1012
Y+APE+ D ++ GVL E++ G+ P D +
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 37/218 (16%)
Query: 816 DFDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
D D IG+G GSV K SG+I+AVK+ S + + Q++ L ++ + +R
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVV--MRSS 78
Query: 875 N---IVKFYG---------FCSHVRHS--------LAMILSNNAAAKDLGWTRRMNVIKG 914
+ IV+FYG C + + + +L + + LG +
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITLA 133
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG 974
AL+++ + I+HRDI N+LLD + DFGI+ L DS T AG
Sbjct: 134 TVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRP 190
Query: 975 YVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y+APE A + DV+S G+ E+ G+ P
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+GKG G V K + + K + + L EV+ L ++ H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 883 C--SHVRHSLAMILSNNAAAKDLGWTRRMN------VIKGISDALSYMHNDCFPPIVHRD 934
S + + + + ++ +R + +IK + ++YMH IVHRD
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRD 146
Query: 935 ISSKNVLLD---FDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCD 991
+ +N+LL+ D + + DFG++ + ++ + GT Y+APE+ EKCD
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCD 204
Query: 992 VYSFGVLALEVIKGKHP 1008
V+S GV+ ++ G P
Sbjct: 205 VWSAGVILYILLSGTPP 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 44/214 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYG 881
+G G +G++ + VAVK+ LP +F EV+ L E H N++++
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFAD---REVQLLRESDEHPNVIRY-- 83
Query: 882 FCSHVRHSLAMILSNNAAA--------KDLGWT--RRMNVIKGISDALSYMHNDCFPPIV 931
FC+ I AA KD + +++ + L+++H+ IV
Sbjct: 84 FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIV 140
Query: 932 HRDISSKNVLLDFDN-----EAHVSDFGIAKFL---KPDSSNWTELAGTYGYVAPELAYT 983
HRD+ N+L+ N +A +SDFG+ K L + S + + GT G++APE+
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM--- 197
Query: 984 MKVTEKC--------DVYSFGVLALEVI-KGKHP 1008
++E C D++S G + VI +G HP
Sbjct: 198 --LSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.1 bits (126), Expect = 9e-07, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 20/198 (10%)
Query: 827 GQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+G+ K +LA +G+ VAVK + Q+ F EV+ + H NIVK +
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNHPNIVKLFEV 81
Query: 883 CSHVRHSLAMILSNNAAAKDLGW---------TRRMNVIKGISDALSYMHNDCFPPIVHR 933
+L ++ + + + + I A+ Y H IVHR
Sbjct: 82 I-ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDV 992
D+ ++N+LLD D ++DFG + + G Y APEL K + DV
Sbjct: 138 DLKAENLLLDADXNIKIADFGFSNEFT-FGNKLDAFCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 993 YSFGVLALEVIKGKHPRD 1010
+S GV+ ++ G P D
Sbjct: 197 WSLGVILYTLVSGSLPFD 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMT--FQQEFLNEVKALTEIRHRNIVKF 879
+G+G +VYKA + + +IVA+KK E + L E+K L E+ H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 880 YGFCSH----------VRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929
H + L +I+ +N+ + ++ L Y+H
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQHW--- 132
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-E 988
I+HRD+ N+LLD + ++DFG+AK + + T Y APEL + ++
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGV 192
Query: 989 KCDVYSFGVLALEVI 1003
D+++ G + E++
Sbjct: 193 GVDMWAVGCILAELL 207
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 107/282 (37%), Gaps = 43/282 (15%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 93
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+V G C+ L +I LS +K + D L+ H C+
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 928 P-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAKFL--KPDSSNWTELAGT 972
+HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRA 272
Query: 1032 PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 273 PDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 219 LATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLS 278
L LYL+ NSL + +P+E+ NL +L +L L +N+L+ S+P LG+ L Y ++N ++
Sbjct: 249 LTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306
Query: 279 GSIPSEFGNLRSLSMLNLGYNKL 301
++P EFGNL +L L + N L
Sbjct: 307 -TLPWEFGNLCNLQFLGVEGNPL 328
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 363 LATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLS 422
L LYL NSL + +P+E+ NL +L +L L +N+L+ S+P LG+ L +DN ++
Sbjct: 249 LTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306
Query: 423 GSIPSEFGNLRSLSTLSLGYNKLSGSIPHSL--GNLTNLDALYLYDNSLSGSIPGE 476
++P EFGNL +L L + N L L ++T L YL DN +P E
Sbjct: 307 -TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGL-IFYLRDNRPEIPLPHE 360
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 459 LDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLF 518
L LYL NSL+ +P EI NL ++ L L++N+L+ S+P LG+ L Y ++N +
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDN-MV 305
Query: 519 DSIPSELGNLRSLSMLSFAYNKLSGSI 545
++P E GNL +L L N L
Sbjct: 306 TTLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 551 VLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNS 610
LDLS+ I I + K +FL +L L N L+ +L ++ +L+ L LDLS NRL+ S
Sbjct: 228 ALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-S 284
Query: 611 IPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAI 659
+P G+ +L Y +N + +P + L +L L + N L +
Sbjct: 285 LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 89 IPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIG 142
+P +I N+S L+ LDLS N ++P E+G LK F+N + ++P+E G
Sbjct: 262 LPAEIKNLSNLRVLDLSHNR-LTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFG 313
Score = 36.6 bits (83), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 267 LATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLS 326
L LYL NSL+ +P+E NL +L +L+L +N+L +P LG+ L Y +N ++
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVT 306
Query: 327 GSIPSEI 333
++P E
Sbjct: 307 -TLPWEF 312
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 507 LVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLG-VLDLSS----NHIVG 561
L LYL NSL + +P+E+ NL +L +L ++N+L+ S+P LG L +++V
Sbjct: 249 LTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT 306
Query: 562 EIPTELGKLNFLIKLILAQNQLSGQL 587
+P E G L L L + N L Q
Sbjct: 307 TLPWEFGNLCNLQFLGVEGNPLEKQF 332
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 438 LSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSI 497
L+L N + + +L +L+ L L N + G L S++ L L +N+L+
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 99
Query: 498 PQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSN 557
Q+ LS L L+L NN + +SIPS +A+N++ LG +L
Sbjct: 100 TQAFEYLSKLRELWLRNNPI-ESIPS------------YAFNRVPSLRRLDLG--ELKRL 144
Query: 558 HIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGN 617
+ E E G +N L L L L P L +L +LE L+LS NRL P SF
Sbjct: 145 EYISEAAFE-GLVN-LRYLNLGMCNLKD--IPNLTALVRLEELELSGNRLDLIRPGSFQG 200
Query: 618 LVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFL 655
L L L L + Q + ++L L EL+LSHN L
Sbjct: 201 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 30/214 (14%)
Query: 362 NLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSL 421
N L L NS+ +LR L +L L N + + L +L TL+L+DN L
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRL 95
Query: 422 SGSIPSE----FGNLRSL--------STLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSL 469
+ ++P++ LR L S S +N++ LG L L+ Y+ + +
Sbjct: 96 T-TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLE--YISEAAF 152
Query: 470 SGSIPGE-----IGNLRSISNLA---------LNNNKLSGSIPQSLGNLSNLVILYLYNN 515
G + + NL+ I NL L+ N+L P S L++L L+L +
Sbjct: 153 EGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHA 212
Query: 516 SLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSL 549
+ + +L+SL L+ ++N L S+PH L
Sbjct: 213 QVATIERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 88/210 (41%), Gaps = 6/210 (2%)
Query: 246 LSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGII 305
L+L N + + +L +L L L +N + F L SL+ L L N+L +
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 99
Query: 306 PHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGY--LSNL 363
+ L+ L L++ NN + SIPS + L NL
Sbjct: 100 TQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 158
Query: 364 ATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSG 423
L L +L D IP+ L L L L L N+L P S LT+L L L ++
Sbjct: 159 RYLNLGMCNLKD-IPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT 216
Query: 424 SIPSEFGNLRSLSTLSLGYNKLSGSIPHSL 453
+ F +L+SL L+L +N L S+PH L
Sbjct: 217 IERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 807 YEEIIRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVK-----KFHSPLPGEMTFQQE 860
Y+E+++ ++ IG GG V A + +GE+VA+K S LP T
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT---- 57
Query: 861 FLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN---------V 911
E++AL +RH++I + Y + + M+L + + + V
Sbjct: 58 ---EIEALKNLRHQHICQLYHVL-ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVV 113
Query: 912 IKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL-- 969
+ I A++Y+H+ + HRD+ +N+L D ++ + DFG+ KP + L
Sbjct: 114 FRQIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCA--KPKGNKDYHLQT 168
Query: 970 -AGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRD 1010
G+ Y APEL + + DV+S G+L ++ G P D
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 89
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ ++NN ++ + + I+D
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 150 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 204
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 79
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ ++NN ++ + + I+D
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 140 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 194
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 66/283 (23%), Positives = 109/283 (38%), Gaps = 44/283 (15%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 94
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGI-SDALSYMHNDC 926
+V G C+ L +I LS +K + + + D L+ H C
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 927 FP-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAG 971
+ +HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 972 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEML 1030
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMR 273
Query: 1031 DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 274 APDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G G V+ VAVK G M+ FL E + +++H+ +V+ Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS-PDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 883 CSHV----------RHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
+ SL L + K L + +++ I++ ++++ + +H
Sbjct: 73 VTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNY---IH 128
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAG-TYGYVAPELAYTMKVTEKCD 991
R++ + N+L+ ++DFG+A+ ++ + E A + APE T K D
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 992 VYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
V+SFG+L E++ G+ P + N + + R+ P ++ + +
Sbjct: 189 VWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPEE----LYQ 237
Query: 1051 VAISCLDENPESRPTMPKVSQLLK 1074
+ C E PE RPT + +L+
Sbjct: 238 LMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
I++RD+ +N+LLD + ++DFG++K GT Y+APE+ +
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHS 210
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D +S+GVL E++ G P
Sbjct: 211 ADWWSYGVLMFEMLTGSLP 229
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
I++RD+ NV+LD + ++DFG+ K D GT Y+APE+ +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++FGVL E++ G+ P
Sbjct: 202 VDWWAFGVLLYEMLAGQAP 220
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 19/218 (8%)
Query: 438 LSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSI 497
L+L N + + +L +L+ L L N + G L S++ L L +N+L+
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 99
Query: 498 PQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSN 557
Q+ LS L L+L NN + +SIPS +A+N++ LG +L
Sbjct: 100 TQAFEYLSKLRELWLRNNPI-ESIPS------------YAFNRVPSLRRLDLG--ELKRL 144
Query: 558 HIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGN 617
+ E E G +N L L L L P L +L +LE L+LS NRL P SF
Sbjct: 145 EYISEAAFE-GLVN-LRYLNLGMCNLKD--IPNLTALVRLEELELSGNRLDLIRPGSFQG 200
Query: 618 LVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFL 655
L L L L + Q + ++L L EL+LSHN L
Sbjct: 201 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 30/214 (14%)
Query: 362 NLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSL 421
N L L NS+ +LR L +L L N + + L +L TL+L+DN L
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRL 95
Query: 422 SGSIPSE----FGNLRSL--------STLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSL 469
+ ++P++ LR L S S +N++ LG L L+ Y+ + +
Sbjct: 96 T-TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLE--YISEAAF 152
Query: 470 SGSIPGE-----IGNLRSISNLA---------LNNNKLSGSIPQSLGNLSNLVILYLYNN 515
G + + NL+ I NL L+ N+L P S L++L L+L +
Sbjct: 153 EGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHA 212
Query: 516 SLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSL 549
+ + +L+SL L+ ++N L S+PH L
Sbjct: 213 QVATIERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 88/210 (41%), Gaps = 6/210 (2%)
Query: 246 LSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGII 305
L+L N + + +L +L L L +N + F L SL+ L L N+L +
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 99
Query: 306 PHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGY--LSNL 363
+ L+ L L++ NN + SIPS + L NL
Sbjct: 100 TQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 158
Query: 364 ATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSG 423
L L +L D IP+ L L L L L N+L P S LT+L L L ++
Sbjct: 159 RYLNLGMCNLKD-IPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT 216
Query: 424 SIPSEFGNLRSLSTLSLGYNKLSGSIPHSL 453
+ F +L+SL L+L +N L S+PH L
Sbjct: 217 IERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 29/281 (10%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIV----AVKKFHSPLPGEMTFQQEFLNE 864
I++ T +F +G G G+VYK + GE V A+K+ + +E L+E
Sbjct: 13 ILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDE 69
Query: 865 VKALTEIRHRNIVKFYGFC--SHVR-----HSLAMILSNNAAAKD-LGWTRRMNVIKGIS 916
+ + + ++ + G C S V+ +L KD +G +N I+
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--G 974
++Y+ + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPR 1033
++A E T + DV+S+GV E++ G P D I + L++ R
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GER 239
Query: 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
LP P D + + + + D P+ R + + S++ +
Sbjct: 240 LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 49/273 (17%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQ---QEFLNEVKALTEIRHRNIVKF 879
+G+G GSV + L + ++K + + + Q +EFL+E + + H N+++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 880 YGFCSHVR-------------------HSLAMILSNNAAAKDLGWTRRMNVIKGISDALS 920
G C + H+ + K + + + I+ +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 921 YMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIA-KFLKPDSSNWTELAGT-YGYVAP 978
Y+ N F +HRD++++N +L D V+DFG++ K D +A ++A
Sbjct: 162 YLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 979 ELAYTMKVTEKCDVYSFGVLALEV-IKGKHPRDFIXXXXXXXLNLNIALDEMLD-----P 1032
E T K DV++FGV E+ +G P + EM D
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRGMTPYP------------GVQNHEMYDYLLHGH 266
Query: 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
RL P +D L + E+ SC +P RPT
Sbjct: 267 RLKQP----EDCLDELYEIMYSCWRTDPLDRPT 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 109/284 (38%), Gaps = 46/284 (16%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGI----------SDALSYMHND 925
+V G C+ L M+++ +L R + + D L+ H
Sbjct: 84 VVNLLGACTKPGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 926 CFP-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELA 970
C+ +HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEM 1029
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRM 261
Query: 1030 LDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 262 RAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 109/284 (38%), Gaps = 46/284 (16%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGI----------SDALSYMHND 925
+V G C+ L M+++ +L R + + D L+ H
Sbjct: 84 VVNLLGACTKPGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 926 CFP-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELA 970
C+ +HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEM 1029
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRM 261
Query: 1030 LDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 262 RAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 374 FDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNL 432
DS+PS + + L + S G LS + + LT L L+L N L F +L
Sbjct: 26 LDSVPSGIPADTEKLDLQSTGLATLSDA---TFRGLTKLTWLNLDYNQLQTLSAGVFDDL 82
Query: 433 RSLSTLSLGYNKLSGSIPHSL-GNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNN 491
L TL L N+L+ S+P + +LT LD LYL N L G L + L LN N
Sbjct: 83 TELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141
Query: 492 KLSGSIPQ-SLGNLSNLVILYLYNNSLFDSIP----SELGNLRSLSMLSFAYN 539
+L SIP + L+NL L L N L S+P LG L+++++ ++
Sbjct: 142 QLQ-SIPAGAFDKLTNLQTLSLSTNQL-QSVPHGAFDRLGKLQTITLFGNQFD 192
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 169 SNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNS 228
++ + L L L+ + F L L+ L+L YN+ +LT L TL L NN
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 229 LFDSIP-SELGNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATLYLYENSLSGSIPS-EF 285
L S+P +L L L LG N+L S+P + LT L L L N L SIP+ F
Sbjct: 95 LA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAF 151
Query: 286 GNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGS 328
L +L L+L N+L + + L L T+ + N S
Sbjct: 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 28/168 (16%)
Query: 283 SEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXX 342
+ F L L+ LNL YN+L + +LT L TL + NN L+ S+P +
Sbjct: 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGV--------- 102
Query: 343 XXXXXXXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSI 401
+L+ L LYL N L S+PS + L L L L N+L SI
Sbjct: 103 --------------FDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQ-SI 146
Query: 402 PH-SLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGS 448
P + LTNL TL L N L F L L T++L N+ S
Sbjct: 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 414 LDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSI 473
LDL L+ + F L L+ L+L YN+L +LT L L L +N L+
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 474 PGEIGNLRSISNLALNNNKLSGSIPQSL-GNLSNLVILYLYNNSLFDSIPS-ELGNLRSL 531
G +L + L L N+L S+P + L+ L L L N L SIP+ L +L
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTNL 157
Query: 532 SMLSFAYNKLSGSIPH 547
LS + N+L S+PH
Sbjct: 158 QTLSLSTNQLQ-SVPH 172
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 167 NLSNLDTLHLYDNSLSDSIP-SEFGNLRSLSMLSLGYNKFSGSIPHSL-GNLTNLATLYL 224
+L+ L TL L +N L+ S+P F +L L L LG N+ S+P + LT L L L
Sbjct: 81 DLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRL 138
Query: 225 HNNSLFDSIPS-ELGNLRSLSMLSLGYNKLSGSIPH-SLGNLTNLATLYLYENSLSGS 280
+ N L SIP+ L +L LSL N+L S+PH + L L T+ L+ N S
Sbjct: 139 NTNQL-QSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSL-GNLTNLATLYLHN 226
L+ L L+L N L F +L L L L N+ + S+P + +LT L LYL
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 227 NSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPH-SLGNLTNLATLYLYENSLSGSIPSE 284
N L S+PS + L L L L N+L SIP + LTNL TL L N L
Sbjct: 117 NQL-KSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174
Query: 285 FGNLRSLSMLNLGYNKLN 302
F L L + L N+ +
Sbjct: 175 FDRLGKLQTITLFGNQFD 192
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 528 LRSLSMLSFAYNKL----SGSIPH--SLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQN 581
L L+ L+ YN+L +G LG L L++N + L L KL L N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 582 QLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQF 631
QL S L +L+ L L++N+L + +F L L L+LS NQ
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 66/180 (36%), Gaps = 35/180 (19%)
Query: 358 GYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLY 417
G ++ L L S L + L L+ L+L YN+L +LT L TL L
Sbjct: 32 GIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91
Query: 418 DNSLSG-----------------------SIPSE-FGNLRSLSTLSLGYNKLSGSIPH-S 452
+N L+ S+PS F L L L L N+L SIP +
Sbjct: 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGA 150
Query: 453 LGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYL 512
LTNL L L N L G L + + L N+ + S ILYL
Sbjct: 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF---------DCSRCEILYL 201
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%)
Query: 595 AQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNF 654
A E LDL S L+ +F L KL +LNL NQ ++L L L L++N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 655 L 655
L
Sbjct: 95 L 95
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 73/186 (39%), Gaps = 27/186 (14%)
Query: 545 IPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSS 604
IP LDL S + L L L L NQL + L +L L L++
Sbjct: 33 IPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92
Query: 605 NRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIPSQIC 664
N+L++ F +L +L L L NQ + L L EL L+ N L ++IP+
Sbjct: 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL-QSIPA--- 148
Query: 665 IMQXXXXXXXXXXXXVGLIPSCFEKMHGLLRIDISYNELQGPIPNSIAFRDAPIEALQ-- 722
F+K+ L + +S N+LQ +P+ R ++ +
Sbjct: 149 --------------------GAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLF 187
Query: 723 GNKGLC 728
GN+ C
Sbjct: 188 GNQFDC 193
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 18 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 74
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG--Y 975
++Y++ + F VHRD++++N ++ D + DFG+ + + G +
Sbjct: 135 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 976 VAPELAYTMKVTEKCDVYSFGVLALEV 1002
++PE T DV+SFGV+ E+
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
Length = 308
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 83
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG--Y 975
++Y++ + F VHRD++++N ++ D + DFG+ + + G +
Sbjct: 144 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 976 VAPELAYTMKVTEKCDVYSFGVLALEV 1002
++PE T DV+SFGV+ E+
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With
An Hydantoin Inhibitor
Length = 305
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 24 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 80
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 141 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 195
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
Length = 301
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 76
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 137 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 191
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 82
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 143 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (34)
Length = 307
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 82
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 143 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 197
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 89
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 150 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 204
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 83
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 144 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 198
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G+ V K EL +G VAVK + + + E++ L RH +I+K Y
Sbjct: 26 VGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 883 CSHVRHSLAMILSNNAAAK-----------DLGWTRRMNVIKGISDALSYMHNDCFPPIV 931
S + M++ + + D +RR+ + I + Y H +V
Sbjct: 85 IS-TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRL--FQQILSGVDYCHRHM---VV 138
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 990
HRD+ +NVLLD A ++DFG++ + D G+ Y APE ++ + +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 991 DVYSFGVLALEVIKGKHPRD 1010
D++S GV+ ++ G P D
Sbjct: 198 DIWSSGVILYALLCGTLPFD 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 35/265 (13%)
Query: 820 EHCIGKGGQGSVYKAEL---ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+ IGKG G VY E A I K S + EM + FL E + + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNV 84
Query: 877 VKFYGFC---SHVRHSLAMILSNNAAAKDLGWTRRMNVIKG-------ISDALSYMHNDC 926
+ G + H L + + + + +R +K ++ + Y+
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 927 FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG-----YVAPELA 981
F VHRD++++N +LD V+DFG+A+ + D ++ + + A E
Sbjct: 145 F---VHRDLAARNCMLDESFTVKVADFGLARDIL-DREYYSVQQHRHARLPVKWTALESL 200
Query: 982 YTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCI 1040
T + T K DV+SFGVL E++ +G P I +L L + RLP P
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-----DPFDLTHFLAQ--GRRLPQPEYC 253
Query: 1041 VQDKLISIVEVAISCLDENPESRPT 1065
S+ +V C + +P RPT
Sbjct: 254 PD----SLYQVMQQCWEADPAVRPT 274
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 814 TNDFDDEH----CIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKAL 868
T D DE+ IG G G V A +G+ VA+KK + +T + L E+K L
Sbjct: 50 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKIL 108
Query: 869 TEIRHRNIVKF---------YGFCSHVRHSLAMILSN----NAAAKDLGWTRRMNVIKGI 915
+H NI+ YG V L ++ S+ +++ L + +
Sbjct: 109 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL--KPDSSNW--TELAG 971
L YMH+ ++HRD+ N+L++ + E + DFG+A+ L P + TE
Sbjct: 169 LRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 972 TYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKH 1007
T Y APEL ++ + T+ D++S G + E++ +
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 55 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 111
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 172 GMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 226
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 66/283 (23%), Positives = 109/283 (38%), Gaps = 44/283 (15%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGI-SDALSYMHNDC 926
+V G C+ L +I LS +K + + + D L+ H C
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 927 FP-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAG 971
+ +HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 972 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEML 1030
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMR 271
Query: 1031 DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 272 APDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G+ + + +L +G VAVK + + + E++ L RH +I+K Y
Sbjct: 21 VGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 883 CSHVRHSLAMILSNNAAAKDLGW-----------TRRMNVIKGISDALSYMHNDCFPPIV 931
S M++ + + + RR+ + I A+ Y H +V
Sbjct: 80 IS-TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL--FQQILSAVDYCHRHM---VV 133
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 990
HRD+ +NVLLD A ++DFG++ + D + G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 991 DVYSFGVLALEVIKGKHPRD 1010
D++S GV+ ++ G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
+HRD++++N+LL N + DFG+A+ + PD + ++APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+SFGVL E+ G P + L M P TP
Sbjct: 275 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTTP---------E 324
Query: 1048 IVEVAISCLDENPESRPTMPKVSQLL 1073
+ + + C P RPT ++ + L
Sbjct: 325 MYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
I++RD+ NV+LD + ++DFG+ K D GT Y+APE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++FGVL E++ G+ P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 814 TNDFDDEH----CIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKAL 868
T D DE+ IG G G V A +G+ VA+KK + +T + L E+K L
Sbjct: 49 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKIL 107
Query: 869 TEIRHRNIVKF---------YGFCSHVRHSLAMILSN----NAAAKDLGWTRRMNVIKGI 915
+H NI+ YG V L ++ S+ +++ L + +
Sbjct: 108 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 916 SDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL--KPDSSNW--TELAG 971
L YMH+ ++HRD+ N+L++ + E + DFG+A+ L P + TE
Sbjct: 168 LRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 972 TYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKH 1007
T Y APEL ++ + T+ D++S G + E++ +
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W LAGT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 109/284 (38%), Gaps = 46/284 (16%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGI----------SDALSYMHND 925
+V G C+ L M+++ +L R + + D L+ H
Sbjct: 84 VVNLLGACTKPGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 926 CFP-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK--PDSSNWTELA 970
C+ +HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEM 1029
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRM 261
Query: 1030 LDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 262 RAPDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 30/239 (12%)
Query: 788 SPGNTRGLLSVLTFEGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKK 846
S G++ LT G+ EI ND ++ +G G G V+K +G ++AVK+
Sbjct: 2 SSGSSGKQTGYLTIGGQRYQAEI----NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQ 57
Query: 847 FHSPLPGEMTFQQEFLNEVKALTEIRH-RNIVKFYG-FCSHVRHSLAMILSNNAAAKDLG 904
G + L ++ + + IV+ +G F ++ +AM L A K
Sbjct: 58 MRRS--GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEK--- 112
Query: 905 WTRRMN----------VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFG 954
+RM + I AL Y+ ++HRD+ N+LLD + + DFG
Sbjct: 113 LKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFG 170
Query: 955 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGKHP 1008
I+ L D + AG Y+APE T+ + DV+S G+ +E+ G+ P
Sbjct: 171 ISGRLVDDKAK-DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
+HRD++++N+LL N + DFG+A+ + PD + ++APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+SFGVL E+ G P + L M P TP
Sbjct: 282 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTTP---------E 331
Query: 1048 IVEVAISCLDENPESRPTMPKVSQLL 1073
+ + + C P RPT ++ + L
Sbjct: 332 MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
+HRD++++N+LL N + DFG+A+ + PD + ++APE + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+SFGVL E+ G P + L M P TP
Sbjct: 280 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTTP---------E 329
Query: 1048 IVEVAISCLDENPESRPTMPKVSQLL 1073
+ + + C P RPT ++ + L
Sbjct: 330 MYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 66/283 (23%), Positives = 109/283 (38%), Gaps = 44/283 (15%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 129
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGI-SDALSYMHNDC 926
+V G C+ L +I LS +K + + + D L+ H C
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 927 FP-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAG 971
+ +HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 972 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEML 1030
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMR 308
Query: 1031 DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 309 APDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 66/283 (23%), Positives = 109/283 (38%), Gaps = 44/283 (15%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGI-SDALSYMHNDC 926
+V G C+ L +I LS +K + + + D L+ H C
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 927 FP-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAG 971
+ +HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 972 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEML 1030
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMR 271
Query: 1031 DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 272 APDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
+HRD++++N+LL N + DFG+A+ + PD + ++APE + T
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+SFGVL E+ G P + L M P TP
Sbjct: 226 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEG-TRMRAPDYTTP---------E 275
Query: 1048 IVEVAISCLDENPESRPTMPKVSQLL 1073
+ + + C P RPT ++ + L
Sbjct: 276 MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 827 GQGSVYKAELAS----GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
G+GS K +LA+ + VA+K L + E+ L +RH +I+K Y
Sbjct: 18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV 77
Query: 883 CSHVRHSLAMILSNNAAAKD-LGWTRRMNVIKG------ISDALSYMHNDCFPPIVHRDI 935
+ + +I D + +RM +G I A+ Y H IVHRD+
Sbjct: 78 ITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDL 134
Query: 936 SSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTEKCDVYS 994
+N+LLD + ++DFG++ + D + G+ Y APE+ + + DV+S
Sbjct: 135 KPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWS 193
Query: 995 FGVLALEVIKGKHPRD 1010
G++ ++ G+ P D
Sbjct: 194 CGIVLYVMLVGRLPFD 209
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K + WT L GT Y+APE+ + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLAPEIILSKGYNKA 239
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG 974
I AL ++H+ I++RD+ NVLLD + ++DFG+ K + GT
Sbjct: 133 IISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD 189
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y+APE+ M D ++ GVL E++ G P
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K WT L GT Y+APE+ + +
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKA 204
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 205 VDWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To (s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To (R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K WT L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 57/231 (24%)
Query: 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR 874
DF + IG GG G V+KA+ G+ +++ ++ EVKAL ++ H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYN-------NEKAEREVKALAKLDHV 65
Query: 875 NIVKFYG------------------------------------------FCSHVRHSLAM 892
NIV + G FC + +L
Sbjct: 66 NIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCD--KGTLEQ 123
Query: 893 ILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSD 952
+ K L + + + I+ + Y+H+ ++HRD+ N+ L + + D
Sbjct: 124 WIEKRRGEK-LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 953 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 1003
FG+ LK D T GT Y++PE + ++ D+Y+ G++ E++
Sbjct: 180 FGLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA-GTYGYVAPELAYTM----- 984
VHRDI NVLLD + ++DFG + D + + +A GT Y++PE+ M
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
K +CD +S GV E++ G+ P
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA-GTYGYVAPELAYTM----- 984
VHRDI NVLLD + ++DFG + D + + +A GT Y++PE+ M
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
K +CD +S GV E++ G+ P
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
Length = 337
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 45/215 (20%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY-- 880
IGKG G V+ + GE VAVK F + E ++ +E E+ +RH NI+ F
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTT--EEASWFRE--TEIYQTVLMRHENILGFIAA 99
Query: 881 ---GFCSHVRHSLAMILSNNAAAKD------LGWTRRMNVIKGISDALSYMHNDCF---- 927
G S + L N + D L + + L ++H + F
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQG 159
Query: 928 -PPIVHRDISSKNVLLDFDNEAHVSDFGIA-KFLKPDSSNWTEL-----AGTYGYVAPEL 980
P I HRD+ SKN+L+ + ++D G+A KF+ +N ++ GT Y+ PE+
Sbjct: 160 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS--DTNEVDIPPNTRVGTKRYMPPEV 217
Query: 981 -----------AYTMKVTEKCDVYSFGVLALEVIK 1004
+Y M D+YSFG++ EV +
Sbjct: 218 LDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK--FLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
+HRD++++N+LL N + DFG+A+ + PD + ++APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+SFGVL E+ G P + L M P TP
Sbjct: 273 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTP---------E 322
Query: 1048 IVEVAISCLDENPESRPTMPKVSQLL 1073
+ + + C P RPT ++ + L
Sbjct: 323 MYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 59/281 (20%), Positives = 113/281 (40%), Gaps = 85/281 (30%)
Query: 842 VAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH--------------- 885
VAVK S + ++ ++E+K ++ + +H NIV G C+H
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 886 -----VRHSLAM-------ILSNNAAAKDLGWTRRMNVIKGISDALSYMHN-DCFPPIVH 932
R S + I ++ A+ +DL ++ ++ ++++ + +C +H
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTASTRDL-----LHFSSQVAQGMAFLASKNC----IH 187
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEKC 990
RD++++NVLL + A + DFG+A+ + DS+ + ++APE + T +
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 247
Query: 991 DVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
DV+S+G+L E+ L LN P P +V K +V+
Sbjct: 248 DVWSYGILLWEIFS---------------LGLN-----------PYPGILVNSKFYKLVK 281
Query: 1051 -----------------VAISCLDENPESRPTMPKVSQLLK 1074
+ +C P RPT ++ L+
Sbjct: 282 DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
+G G+ + + +L +G VAVK + + + E++ L RH +I+K Y
Sbjct: 21 VGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 883 CSHVRHSLAMILSNNAAAKDLGW-----------TRRMNVIKGISDALSYMHNDCFPPIV 931
S M++ + + + RR+ + I A+ Y H +V
Sbjct: 80 IS-TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL--FQQILSAVDYCHRHM---VV 133
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKC 990
HRD+ +NVLLD A ++DFG++ + D G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGSPNYAAPEVISGRLYAGPEV 192
Query: 991 DVYSFGVLALEVIKGKHPRD 1010
D++S GV+ ++ G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 910 NVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN--EAHVSDFGIAK-FLKPDSSNW 966
N+++ I AL Y+HN I HRDI +N L + E + DFG++K F K ++ +
Sbjct: 172 NIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 967 ---TELAGTYGYVAPELAYTMKVT--EKCDVYSFGVLALEVIKGKHP 1008
T AGT +VAPE+ T + KCD +S GVL ++ G P
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 66/283 (23%), Positives = 109/283 (38%), Gaps = 44/283 (15%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 83
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGI-SDALSYMHNDC 926
+V G C+ L +I LS +K + + + D L+ H C
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 927 FP-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK--PDSSNWTELAG 971
+ +HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 972 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEML 1030
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMR 262
Query: 1031 DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 263 APDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 66/283 (23%), Positives = 109/283 (38%), Gaps = 44/283 (15%)
Query: 823 IGKGGQGSVYKAE------LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRN 875
+G+G G V +A+ A+ VAVK + + ++E+K L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLN 92
Query: 876 IVKFYGFCSHVRHSLAMI--------LSNNAAAKDLGWTRRMNVIKGI-SDALSYMHNDC 926
+V G C+ L +I LS +K + + + D L+ H C
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 927 FP-------------PIVHRDISSKNVLLDFDNEAHVSDFGIAKFL--KPDSSNWTELAG 971
+ +HRD++++N+LL N + DFG+A+ + PD +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 972 TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEML 1030
++APE + T + DV+SFGVL E+ G P + L M
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMR 271
Query: 1031 DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073
P TP + + + C P RPT ++ + L
Sbjct: 272 APDYTTP---------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 357 LGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATLD 415
+ YL N+ L L N L D S L L +L+ L L N+L S+P+ + LTNL L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELV 115
Query: 416 LYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPG 475
L +N L F L +L+ L+L +N+L LTNL L L N L G
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175
Query: 476 EIGNLRSISNLALNNNKLSGSIPQSL-GNLSNLVILYLYNNSLFDSIPSELGNLRSLSML 534
L + +L L N+L S+P + L++L ++L++N + P + L
Sbjct: 176 VFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYL 227
Query: 535 SFAYNKLSGSIPHSLG 550
S NK SG + +S G
Sbjct: 228 SEWINKHSGVVRNSAG 243
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 356 SLGYLSNLATLYLYSNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATL 414
+L L+NL L L N L S+P+ + L +L L L N+L LTNL L
Sbjct: 80 ALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 415 DLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSL-GNLTNLDALYLYDNSLSGSI 473
+L N L F L +L+ L L YN+L S+P + LT L L LY N L
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKSVP 197
Query: 474 PGEIGNLRSISNLALNNNKLSGSIP 498
G L S+ + L++N + P
Sbjct: 198 DGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSL-GNLTNLATLYLHN 226
L N+ L L N L D S L +L+ L L N+ S+P+ + LTNL L L
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVE 118
Query: 227 NSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L S+P + L +L+ L+L +N+L LTNL L L N L F
Sbjct: 119 NQL-QSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVF 177
Query: 286 GNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIP 330
L L L L N+L + LT+L +++H+N + P
Sbjct: 178 DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 565 TELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYL 624
+ L +L L LIL NQL + L L+ L L N+L + F L L YL
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 625 NLSNNQFSRGIPIKLEELIHLSELDLSHNFLR 656
NL++NQ ++L +L+ELDLS+N L+
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
Query: 164 SLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLY 223
+L L+NL L L N L F L +L L L N+ LTNL L
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139
Query: 224 LHNNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATLYLYENSLSGSI 281
L +N L S+P + L +L+ L L YN+L S+P + LT L L LY+N L
Sbjct: 140 LAHNQL-QSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKSVP 197
Query: 282 PSEFGNLRSLSMLNLGYNKLNGIIP 306
F L SL + L N + P
Sbjct: 198 DGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 480 LRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYN 539
L SI + NN+ + Q + L N+ L L N L D S L L +L+ L N
Sbjct: 40 LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGN 95
Query: 540 KLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEH 599
+L S+P+ GV D KL L +L+L +NQL L L +
Sbjct: 96 QLQ-SLPN--GVFD---------------KLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137
Query: 600 LDLSSNRLSNSIPKS-FGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREA 658
L+L+ N+L S+PK F L L L+LS NQ ++L L +L L N L+ +
Sbjct: 138 LNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK-S 195
Query: 659 IPSQI 663
+P +
Sbjct: 196 VPDGV 200
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 12/224 (5%)
Query: 420 SLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGN 479
++S I F + T+ K S + + L ++D + + +NS S+ G I
Sbjct: 4 TVSTPIKQIFPDDAFAETIKANLKKKSVTDAVTQNELNSIDQI-IANNSDIKSVQG-IQY 61
Query: 480 LRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPS----ELGNLRSLSMLS 535
L ++ LAL NKL +L L+NL L L N L S+P+ +L NL+ L ++
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVE 118
Query: 536 FAYNKLSGSIPH---SLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLG 592
L + +L L+L+ N + KL L +L L+ NQL
Sbjct: 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFD 178
Query: 593 SLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIP 636
L QL+ L L N+L + F L L Y+ L +N + P
Sbjct: 179 KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 31/153 (20%)
Query: 64 LHDFSFSSFPHLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYL 123
L D F +L YL+L HNQL ++ L LDLS N L+ L
Sbjct: 124 LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQL 183
Query: 124 KTLQLFENQLNGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYDNSLSD 183
K L+L++NQL S+P + L++L + L+DN
Sbjct: 184 KDLRLYQNQLK-SVPDGV-----------------------FDRLTSLQYIWLHDNPWDC 219
Query: 184 SIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNL 216
+ P + LS NK SG + +S G++
Sbjct: 220 TCP-------GIRYLSEWINKHSGVVRNSAGSV 245
Score = 33.1 bits (74), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 24/114 (21%)
Query: 591 LGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDL 650
L L L +L L+ N+L + F L L L L NQ ++L +L+ L+L
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140
Query: 651 SHNFLREAIPSQICIMQXXXXXXXXXXXXVGLIPSCFEKMHGLLRIDISYNELQ 704
+HN L +++P + F+K+ L +D+SYN+LQ
Sbjct: 141 AHNQL-QSLPKGV-----------------------FDKLTNLTELDLSYNQLQ 170
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 37/209 (17%)
Query: 823 IGKGGQGSVYKAELASGEI-------VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G VY+ +A G + VA+K + M + EFLNE + E +
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHH 76
Query: 876 IVKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISD 917
+V+ G S + +L ++ + NN ++ + + I+D
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----Y 973
++Y++ + F VHRD++++N + D + DFG+ + + +++ G
Sbjct: 137 GMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPV 191
Query: 974 GYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+++PE T DV+SFGV+ E+
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 96/242 (39%), Gaps = 28/242 (11%)
Query: 817 FDDEHCIGKGGQGSVYKAELASG----EIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEI 871
F+ +GKGG G V++ +G +I A+K + E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 872 RHRNIVKF-YGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV---------IKGISDALSY 921
+H IV Y F L +IL + + R + + IS AL +
Sbjct: 79 KHPFIVDLIYAF--QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+H I++RD+ +N++L+ ++DFG+ K D + GT Y+APE+
Sbjct: 137 LHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIV 1041
D +S G L +++ G P N +D++L +L P +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP--------FTGENRKKTIDKILKCKLNLPPYLT 245
Query: 1042 QD 1043
Q+
Sbjct: 246 QE 247
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 96/242 (39%), Gaps = 28/242 (11%)
Query: 817 FDDEHCIGKGGQGSVYKAELASG----EIVAVKKFHSPLPGEMTFQQEFLN-EVKALTEI 871
F+ +GKGG G V++ +G +I A+K + E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 872 RHRNIVKF-YGFCSHVRHSLAMILSNNAAAKDLGWTRRMNV---------IKGISDALSY 921
+H IV Y F L +IL + + R + + IS AL +
Sbjct: 79 KHPFIVDLIYAF--QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 922 MHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+H I++RD+ +N++L+ ++DFG+ K D + GT Y+APE+
Sbjct: 137 LHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 982 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIV 1041
D +S G L +++ G P N +D++L +L P +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP--------FTGENRKKTIDKILKCKLNLPPYLT 245
Query: 1042 QD 1043
Q+
Sbjct: 246 QE 247
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 218 NLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSL 277
++ LYL N F +P EL N + L+++ L N++S S N+T L TL L N L
Sbjct: 32 DVTELYLDGNQ-FTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
Query: 278 SGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
P F L+SL +L+L N ++ + + +L+ L+ L I N L
Sbjct: 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 363 LATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLS 422
L T+ SN +P G R ++ L L N+ + +P L N +L +DL +N +S
Sbjct: 11 LDTVVRCSNKGLKVLPK--GIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS 67
Query: 423 GSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRS 482
F N+ L TL L YN+L P + L +L L L+ N +S G +L +
Sbjct: 68 TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSA 127
Query: 483 ISNLALNNNKL 493
+S+LA+ N L
Sbjct: 128 LSHLAIGANPL 138
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 193 RSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNK 252
R ++ L L N+F+ +P L N +L + L NN + N+ L L L YN+
Sbjct: 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89
Query: 253 LSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKL 301
L P + L +L L L+ N +S F +L +LS L +G N L
Sbjct: 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 172 DTLHLY-DNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLF 230
D LY D + +P E N + L+++ L N+ S S N+T L TL L N L
Sbjct: 32 DVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 231 DSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSL 277
P L+SL +LSL N +S + +L+ L+ L + N L
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%)
Query: 160 LIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNL 219
L+P L N +L + L +N +S F N+ L L L YN+ P + L +L
Sbjct: 45 LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSL 104
Query: 220 ATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKL 253
L LH N + +L +LS L++G N L
Sbjct: 105 RLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 425 IPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSIS 484
+P E N + L+ + L N++S S N+T L L L N L P L+S+
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 485 NLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLF 518
L+L+ N +S + +LS L L + N L+
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 353 IPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLA 412
+P L +L + L +N + N+ L L L YN+L P + L +L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 413 TLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKL 445
L L+ N +S F +L +LS L++G N L
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 573 LIKLILAQNQLSGQLSPK-LGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQF 631
+ +L L NQ + L PK L + L +DLS+NR+S +SF N+ +L L LS N+
Sbjct: 33 VTELYLDGNQFT--LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
Query: 632 SRGIP 636
R IP
Sbjct: 91 -RCIP 94
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 104/252 (41%), Gaps = 53/252 (21%)
Query: 409 TNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNS 468
TN L+L++N + + F +LR L L L N + + L NL+ L L+DN
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 469 LSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPS----E 524
L+ G L + L L NN + SIP + F+ IPS +
Sbjct: 124 LTTIPNGAFVYLSKLKELWLRNNPIE-SIP----------------SYAFNRIPSLRRLD 166
Query: 525 LGNLRSLSMLSF-AYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQL 583
LG L+ LS +S A+ LS +L + +L EIP
Sbjct: 167 LGELKRLSYISEGAFEGLSNLRYLNLAMCNLR------EIP------------------- 201
Query: 584 SGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELI 643
L+P L +L+ LDLS N LS P SF L+ L L + +Q + L
Sbjct: 202 --NLTP----LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255
Query: 644 HLSELDLSHNFL 655
L E++L+HN L
Sbjct: 256 SLVEINLAHNNL 267
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 53/231 (22%)
Query: 119 HLSYLKTLQLFENQLNGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLYD 178
HL +L+ LQL N + EIG + L+NL+TL L+D
Sbjct: 86 HLRHLEILQLSRNHIRT---IEIG---------------------AFNGLANLNTLELFD 121
Query: 179 NSLS-----------------------DSIPS-EFGNLRSLSMLSLGYNKFSGSIPH-SL 213
N L+ +SIPS F + SL L LG K I +
Sbjct: 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAF 181
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
L+NL L L +L + IP+ L L L L L N LS P S L +L L++
Sbjct: 182 EGLSNLRYLNLAMCNLRE-IPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMI 239
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGN-LTNLATLYIHNN 323
++ + + F NL+SL +NL +N L ++PH L L +L +++H+N
Sbjct: 240 QSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 358 GYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLY 417
G +N L L+ N + + +LR L +L L N + + L NL TL+L+
Sbjct: 61 GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120
Query: 418 DNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPH------------SLGNLTNLDALYLY 465
DN L+ F L L L L N + SIP LG L L Y+
Sbjct: 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLS--YIS 177
Query: 466 DNSLSG-----SIPGEIGNLRSISNLA---------LNNNKLSGSIPQSLGNLSNLVILY 511
+ + G + + NLR I NL L+ N LS P S L +L L+
Sbjct: 178 EGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 237
Query: 512 LYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSL 549
+ + + + NL+SL ++ A+N L+ +PH L
Sbjct: 238 MIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 274
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 7/226 (3%)
Query: 245 MLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGI 304
+L+L N++ +S +L +L L L N + F L +L+ L L N+L I
Sbjct: 68 LLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTI 127
Query: 305 IPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGY--LSN 362
+ L+ L L++ NN + SIPS + LSN
Sbjct: 128 PNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSN 186
Query: 363 LATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLS 422
L L L +L + IP+ L L L L L N LS P S L +L L + + +
Sbjct: 187 LRYLNLAMCNLRE-IPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244
Query: 423 GSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGN-LTNLDALYLYDN 467
+ F NL+SL ++L +N L+ +PH L L +L+ ++L+ N
Sbjct: 245 VIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 882 FCSHVR-----HSLAMILS------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ + + +++ + +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---I 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKG 1005
D++S GV+ E+IKG
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLK--PDSSNWTELAGTYGYVAPELAYTMKVTE 988
+HRD++++N+LL N + DFG+A+ + PD + ++APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 989 KCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047
+ DV+SFGVL E+ G P + L M P TP
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRMRAPDYTTP---------E 279
Query: 1048 IVEVAISCLDENPESRPTMPKVSQLL 1073
+ + + C P RPT ++ + L
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With
A Staurosporine Analogue
Length = 290
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 817 FDDEHC-----IGKGGQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLN 863
F++ H +GKG GSV EL +G +VAVK+ P + Q++F
Sbjct: 4 FEERHLKYISQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQR 57
Query: 864 EVKALTEIRHRNIVKFYGFC-SHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYM 922
E++ L + IVK+ G R L +++ + + +R S L Y
Sbjct: 58 EIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 117
Query: 923 HNDC-------FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG- 974
C VHRD++++N+L++ + ++DFG+AK L D
Sbjct: 118 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 975 --YVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+ APE + + DV+SFGV+ E+
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 111/274 (40%), Gaps = 75/274 (27%)
Query: 842 VAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNAAA 900
VAVK S + ++ ++E+K ++ + +H NIV G C+H ++++
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTH--GGPVLVITEYCCY 134
Query: 901 KDL-GWTRR-------------------MNVIKGISDALSYMHN-DCFPPIVHRDISSKN 939
DL + RR ++ ++ ++++ + +C +HRD++++N
Sbjct: 135 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARN 190
Query: 940 VLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEKCDVYSFGV 997
VLL + A + DFG+A+ + DS+ + ++APE + T + DV+S+G+
Sbjct: 191 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 250
Query: 998 LALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE------- 1050
L E+ L LN P P +V K +V+
Sbjct: 251 LLWEIFS---------------LGLN-----------PYPGILVNSKFYKLVKDGYQMAQ 284
Query: 1051 ----------VAISCLDENPESRPTMPKVSQLLK 1074
+ +C P RPT ++ L+
Sbjct: 285 PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 357 LGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATLD 415
+ YL N+ L L N L D S L L +L+ L L N+L S+P+ + LTNL L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELV 115
Query: 416 LYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPG 475
L +N L F L +L+ L L +N+L LTNL L L +N L G
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEG 175
Query: 476 EIGNLRSISNLALNNNKLSGSIPQSL-GNLSNLVILYLYNN 515
L + L+LN+N+L S+P + L++L ++L NN
Sbjct: 176 VFDKLTQLKQLSLNDNQLK-SVPDGVFDRLTSLTHIWLLNN 215
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 192 LRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSEL-GNLRSLSMLSLGY 250
L ++ L+LG NK +L LTNL L L N L S+P+ + L +L L L
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVE 118
Query: 251 NKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLG 310
N+L LTNL LYLY N L F L +L+ L+L N+L +
Sbjct: 119 NQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFD 178
Query: 311 NLTNLATLYIHNNSLSGSIPSEI 333
LT L L +++N L S+P +
Sbjct: 179 KLTQLKQLSLNDNQLK-SVPDGV 200
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 384 LRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYN 443
L ++ L+LG NKL +L LTNL L L N L F L +L L L N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 444 KLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSL-G 502
+L LTNL LYLY N L G L +++ L L+NN+L S+P+ +
Sbjct: 120 QLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFD 178
Query: 503 NLSNLVILYLYNNSLFDSIPS 523
L+ L L L +N L S+P
Sbjct: 179 KLTQLKQLSLNDNQL-KSVPD 198
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 356 SLGYLSNLATLYLYSNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATL 414
+L L+NL L L N L S+P+ + L +L L L N+L LTNL L
Sbjct: 80 ALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 415 DLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSL-GNLTNLDALYLYDNSLSGSI 473
LY N L F L +L+ L L N+L S+P + LT L L L DN L
Sbjct: 139 YLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLKSVP 197
Query: 474 PGEIGNLRSISNLALNNN 491
G L S++++ L NN
Sbjct: 198 DGVFDRLTSLTHIWLLNN 215
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 82/185 (44%), Gaps = 25/185 (13%)
Query: 480 LRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYN 539
L SI + NN+ + Q + L N+ L L N L D S L L +L+ L N
Sbjct: 40 LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGN 95
Query: 540 KLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEH 599
+L S+P+ GV D KL L +L+L +NQL L L +
Sbjct: 96 QLQ-SLPN--GVFD---------------KLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137
Query: 600 LDLSSNRLSNSIPKS-FGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREA 658
L L N+L S+PK F L L L+L NNQ ++L L +L L+ N L+ +
Sbjct: 138 LYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-S 195
Query: 659 IPSQI 663
+P +
Sbjct: 196 VPDGV 200
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSL-GNLTNLATLYLHN 226
L N+ L L N L D S L +L+ L L N+ S+P+ + LTNL L L
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVE 118
Query: 227 NSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L S+P + L +L+ L L +N+L LTNL L L N L F
Sbjct: 119 NQL-QSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVF 177
Query: 286 GNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNN 323
L L L+L N+L + LT+L +++ NN
Sbjct: 178 DKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 72/195 (36%), Gaps = 44/195 (22%)
Query: 438 LSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSI 497
L+LG NKL +L LTNL L L N L G L ++ L L N+L
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLP 125
Query: 498 PQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSN 557
L+NL LYLY+N L S+P GV D
Sbjct: 126 DGVFDKLTNLTYLYLYHNQL-QSLPK--------------------------GVFD---- 154
Query: 558 HIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGN 617
KL L +L L NQL L QL+ L L+ N+L + F
Sbjct: 155 -----------KLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDR 203
Query: 618 LVKLHYLNLSNNQFS 632
L L ++ L NN +
Sbjct: 204 LTSLTHIWLLNNPWD 218
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 29/231 (12%)
Query: 420 SLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGN 479
++S I F + T+ K S + + L ++D + + +NS S+ G I
Sbjct: 4 TVSTPIKQIFPDDAFAETIKANLKKKSVTDAVTQNELNSIDQI-IANNSDIKSVQG-IQY 61
Query: 480 LRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSEL-GNLRSLSMLSFAY 538
L ++ LAL NKL +L L+NL L L N L S+P+ + L +L L
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVE 118
Query: 539 NKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLE 598
N+L S+P GV D KL L L L NQL L L
Sbjct: 119 NQLQ-SLPD--GVFD---------------KLTNLTYLYLYHNQLQSLPKGVFDKLTNLT 160
Query: 599 HLDLSSNRLSNSIPKS-FGNLVKLHYLNLSNNQFSR---GIPIKLEELIHL 645
LDL +N+L S+P+ F L +L L+L++NQ G+ +L L H+
Sbjct: 161 RLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHI 210
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 164 SLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLY 223
+L L+NL L L N L F L +L L L N+ LTNL LY
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLY 139
Query: 224 LHNNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATLYLYENSLSGSI 281
L++N L S+P + L +L+ L L N+L S+P + LT L L L +N L
Sbjct: 140 LYHNQL-QSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLKSVP 197
Query: 282 PSEFGNLRSLS 292
F L SL+
Sbjct: 198 DGVFDRLTSLT 208
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 64 LHDFSFSSFPHLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYL 123
L D F +L YL L+HNQL ++ L LDL +N L+ L
Sbjct: 124 LPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQL 183
Query: 124 KTLQLFENQLNGSIP 138
K L L +NQL S+P
Sbjct: 184 KQLSLNDNQLK-SVP 197
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 70/291 (24%), Positives = 117/291 (40%), Gaps = 61/291 (20%)
Query: 823 IGKGGQGSVYKAEL---ASGE---IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+ G VYK L A GE VA+K G + ++EF +E ++H N+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL--REEFRHEAMLRARLQHPNV 74
Query: 877 VKFYG-------------FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG--------- 914
V G +CSH L L + D+G T +K
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSH--GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 915 ----ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970
I+ + Y+ + +VH+D++++NVL+ +SD G+ F + ++++ +L
Sbjct: 133 LVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLL 187
Query: 971 GT----YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIA 1025
G ++APE K + D++S+GV+ EV G P N
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS---------NQD 238
Query: 1026 LDEMLDPR--LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ EM+ R LP P D + + I C +E P RP + L+
Sbjct: 239 VVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA-GTYGYVAPELAYTM----- 984
VHRDI N+L+D + ++DFG L D + + +A GT Y++PE+ M
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ +CD +S GV E++ G+ P
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G G G V++ E A+G + K ++P P + + NE+ + ++ H ++ +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD---KYTVKNEISIMNQLHHPKLINLHD 115
Query: 882 FCSHVRHSLAMILS--------NNAAAKD--LGWTRRMNVIKGISDALSYMHNDCFPPIV 931
++ + +IL + AA+D + +N ++ + L +MH IV
Sbjct: 116 -AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IV 171
Query: 932 HRDISSKNVLLDFDNEAHVS--DFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
H DI +N++ + + V DFG+A L PD A T + APE+ V
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDREPVGFY 230
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D+++ GVL ++ G P
Sbjct: 231 TDMWAIGVLGYVLLSGLSP 249
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 107/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 134
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + + + G
Sbjct: 195 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLP 249
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 307
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 308 PKNCPGP----------VYRIMTQCWQHQPEDRP 331
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 70/291 (24%), Positives = 117/291 (40%), Gaps = 61/291 (20%)
Query: 823 IGKGGQGSVYKAEL---ASGE---IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+ G VYK L A GE VA+K G + ++EF +E ++H N+
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL--REEFRHEAMLRARLQHPNV 91
Query: 877 VKFYG-------------FCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKG--------- 914
V G +CSH L L + D+G T +K
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSH--GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 915 ----ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970
I+ + Y+ + +VH+D++++NVL+ +SD G+ F + ++++ +L
Sbjct: 150 LVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLL 204
Query: 971 GT----YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIA 1025
G ++APE K + D++S+GV+ EV G P N
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS---------NQD 255
Query: 1026 LDEMLDPR--LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ EM+ R LP P D + + I C +E P RP + L+
Sbjct: 256 VVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 102 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 214
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-dependent
Protein Kinase Complexed With A Phosphorylated Substrate
Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase Catalytic
Subunit Alpha In Complex With Peptide Inhibitor Pki Alpha
(6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 111/274 (40%), Gaps = 75/274 (27%)
Query: 842 VAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNAAA 900
VAVK S + ++ ++E+K ++ + +H NIV G C+H ++++
Sbjct: 71 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTH--GGPVLVITEYCCY 126
Query: 901 KDL-GWTRR-------------------MNVIKGISDALSYMHN-DCFPPIVHRDISSKN 939
DL + RR ++ ++ ++++ + +C +HRD++++N
Sbjct: 127 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARN 182
Query: 940 VLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEKCDVYSFGV 997
VLL + A + DFG+A+ + DS+ + ++APE + T + DV+S+G+
Sbjct: 183 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 242
Query: 998 LALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE------- 1050
L E+ L LN P P +V K +V+
Sbjct: 243 LLWEIFS---------------LGLN-----------PYPGILVNSKFYKLVKDGYQMAQ 276
Query: 1051 ----------VAISCLDENPESRPTMPKVSQLLK 1074
+ +C P RPT ++ L+
Sbjct: 277 PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent
Protein Kinase And Adenosine Further Defines
Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 88 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 147 ---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 200
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
Length = 350
Score = 50.1 bits (118), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The Inhibited
State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 96 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 155 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 208
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDF IG+GG G VY A +G++ A+K + LNE L+ +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 874 RN----IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISD----------AL 919
+ + Y F + + S + L N DL + + + +D L
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDSSNWTELAGTYGYV 976
+MHN +V+RD+ N+LLD +SD G+A KP +S GT+GY+
Sbjct: 305 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYM 356
Query: 977 APE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
APE L + D +S G + ++++G P
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDF IG+GG G VY A +G++ A+K + LNE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 874 RN----IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISD----------AL 919
+ + Y F + + S + L N DL + + + +D L
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDSSNWTELAGTYGYV 976
+MHN +V+RD+ N+LLD +SD G+A KP +S GT+GY+
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYM 357
Query: 977 APE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
APE L + D +S G + ++++G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
+ IGKG G V++ + GE VAVK F S E ++ +E E+ +RH NI+ F
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 63
Query: 880 YGFCSHVRHS---LAMILSNNAAAKDLGWTRRMNV-IKGI-------SDALSYMHNDCF- 927
+ + L ++ + + R V ++G+ + L+++H +
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 928 ----PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVA 977
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T GT Y+A
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 978 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 1004
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf-
Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
+ IGKG G V++ + GE VAVK F S E ++ +E E+ +RH NI+ F
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 62
Query: 880 YGFCSHVRHS---LAMILSNNAAAKDLGWTRRMNV-IKGI-------SDALSYMHNDCF- 927
+ + L ++ + + R V ++G+ + L+++H +
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 928 ----PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVA 977
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T GT Y+A
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 978 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 1004
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
+ IGKG G V++ + GE VAVK F S E ++ +E E+ +RH NI+ F
Sbjct: 34 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 88
Query: 880 YGFCSHVRHS---LAMILSNNAAAKDLGWTRRMNV-IKGI-------SDALSYMHNDCF- 927
+ + L ++ + + R V ++G+ + L+++H +
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 928 ----PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVA 977
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T GT Y+A
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 978 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 1004
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
+ IGKG G V++ + GE VAVK F S E ++ +E E+ +RH NI+ F
Sbjct: 14 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 68
Query: 880 YGFCSHVRHS---LAMILSNNAAAKDLGWTRRMNV-IKGI-------SDALSYMHNDCF- 927
+ + L ++ + + R V ++G+ + L+++H +
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 928 ----PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVA 977
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T GT Y+A
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 978 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 1004
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With 4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
+ IGKG G V++ + GE VAVK F S E ++ +E E+ +RH NI+ F
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 65
Query: 880 YGFCSHVRHS---LAMILSNNAAAKDLGWTRRMNV-IKGI-------SDALSYMHNDCF- 927
+ + L ++ + + R V ++G+ + L+++H +
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 928 ----PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVA 977
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T GT Y+A
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 978 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 1004
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With A
Peptide Inhibitor And Detergent
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN---------VIKGISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
+ IGKG G V++ + GE VAVK F S E ++ +E E+ +RH NI+ F
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 101
Query: 880 YGFCSHVRHS---LAMILSNNAAAKDLGWTRRMNV-IKGI-------SDALSYMHNDCF- 927
+ + L ++ + + R V ++G+ + L+++H +
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 928 ----PPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT------ELAGTYGYVA 977
P I HRD+ SKN+L+ + ++D G+A ++ DS+ T GT Y+A
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 978 PEL---AYTMKVTE---KCDVYSFGVLALEVIK 1004
PE+ + MK E + D+Y+ G++ E+ +
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 882 FCSHVR-----HSLAMILS------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ + + +++ + +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---I 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKG 1005
D++S GV+ E+IKG
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 204/505 (40%), Gaps = 82/505 (16%)
Query: 62 GMLHDFSFSSFPHLAYLDLWHNQLYG-NIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHL 120
+L D F + L LDL NQ+ + P G ++ LK +D SSN F E+ L
Sbjct: 112 AVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171
Query: 121 SYLKTLQLFE---NQLNGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDTLHLY 177
KTL F N L + + G+ I GN +D +
Sbjct: 172 QG-KTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE------ILDVSGNGWTVDITGNF 224
Query: 178 DNSLSDSIPSEFGNLRSLSMLSLGY----------NKFSGSIPHSLGNLT-NLATLYLHN 226
N++S S F + + ++ G+ N F+G S+ +L + ++ N
Sbjct: 225 SNAISKS--QAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLN 282
Query: 227 NSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFG 286
+ +F++ L+ L +L+L YNK++ + L NL L L N L S F
Sbjct: 283 SRVFET-------LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFY 335
Query: 287 NLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXX 346
L ++ ++L N + I + L L TL + +N+L+
Sbjct: 336 GLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT-------------------- 375
Query: 347 XXXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSG-SIPHSL 405
++ ++ ++ ++L N L ++P NL + +++ L N+L I + L
Sbjct: 376 ---------TIHFIPSIPDIFLSGNKLV-TLPK--INLTA-NLIHLSENRLENLDILYFL 422
Query: 406 GNLTNLATLDLYDNSLSG----SIPSEFGNLRSLSTLSLGYNKLSGSIPHSLG-----NL 456
+ +L L L N S PSE SL L LG N L + L L
Sbjct: 423 LRVPHLQILILNQNRFSSCSGDQTPSENP---SLEQLFLGENMLQLAWETELCWDVFEGL 479
Query: 457 TNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNS 516
++L LYL N L+ PG +L ++ L+LN+N+L+ L +NL IL + N
Sbjct: 480 SHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQ 537
Query: 517 LFDSIPSELGNLRSLSMLSFAYNKL 541
L P SLS+L +NK
Sbjct: 538 LLAPNPDV---FVSLSVLDITHNKF 559
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 33/265 (12%)
Query: 429 FGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSI--PGEIGNLRSISNL 486
F NL +L L LG +K+ P + L +L L LY LS ++ G NL++++ L
Sbjct: 69 FRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRL 128
Query: 487 ALNNNKL-SGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNL--RSLSMLSFAYNKLSG 543
L+ N++ S + S G L++L + +N +F EL L ++LS S A N L
Sbjct: 129 DLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYS 188
Query: 544 SIPHSLG------------VLDLSSN----HIVGEIPTELGKLNFLIKLILAQNQLSGQL 587
+ G +LD+S N I G + K LILA + +
Sbjct: 189 RVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQ-AFSLILAHHIMGAGF 247
Query: 588 ------SPKLGSLAQL-----EHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIP 636
P + A L HLDLS + + + F L L LNL+ N+ ++
Sbjct: 248 GFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIAD 307
Query: 637 IKLEELIHLSELDLSHNFLREAIPS 661
L +L L+LS+N L E S
Sbjct: 308 EAFYGLDNLQVLNLSYNLLGELYSS 332
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 128/549 (23%), Positives = 204/549 (37%), Gaps = 117/549 (21%)
Query: 239 NLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSE--FGNLRSLSMLNL 296
NL +L +L LG +K+ P + L +L L LY LS ++ + F NL++L+ L+L
Sbjct: 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDL 130
Query: 297 GYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPS 356
N++ +LY+H PS
Sbjct: 131 SKNQIR--------------SLYLH---------------------------------PS 143
Query: 357 LGYLSNLATLYLYSNSLFDSIPSELGNL--RSLSMLSLGYNKLSGSIPHSLGNLTN---- 410
G L++L ++ SN +F EL L ++LS SL N L + G N
Sbjct: 144 FGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRN 203
Query: 411 --LATLDLYDNSLSGSIPSEFGNLRSLSTL------------SLGYNKLSGSIPHSLGNL 456
L LD+ N + I F N S S G++ + ++ L
Sbjct: 204 MVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263
Query: 457 T-----NLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILY 511
+LD + + SL+ + + +L+ + NLA N K++ ++ L NL +L
Sbjct: 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLK-VLNLAYN--KINKIADEAFYGLDNLQVLN 320
Query: 512 LYNNSLFDSIPSELGNLRSLSMLSFAYNKL------SGSIPHSLGVLDLSSN-----HIV 560
L N L + S L ++ + N + + L LDL N H +
Sbjct: 321 LSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFI 380
Query: 561 GEIP---------TELGKLNFLIKLI-LAQNQLSG-QLSPKLGSLAQLEHLDLSSNRLSN 609
IP L K+N LI L++N+L + L + L+ L L+ NR S+
Sbjct: 381 PSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSS 440
Query: 610 -SIPKSFGNLVKLHYLNLSNNQFSRGIPIKL-----EELIHLSELDLSHNFLREAIPSQI 663
S ++ L L L N +L E L HL L L+HN+L P
Sbjct: 441 CSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVF 500
Query: 664 CIMQXXXXXXXXXXXXVGL----IPSCFEKMHGLLRIDISYNELQGPIPNSIAFRDAPIE 719
+ L +P+ E + DIS N+L P P+ F +
Sbjct: 501 SHLTALRGLSLNSNRLTVLSHNDLPANLEIL------DISRNQLLAPNPD--VFVSLSVL 552
Query: 720 ALQGNKGLC 728
+ NK +C
Sbjct: 553 DITHNKFIC 561
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 202/522 (38%), Gaps = 90/522 (17%)
Query: 189 FGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSE--LGNLRSLSML 246
F NL +L +L LG +K P + L +L L L+ L D++ + NL++L+ L
Sbjct: 69 FRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRL 128
Query: 247 SLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIP 306
L N++ +LYL+ PS FG L SL ++ N++ +
Sbjct: 129 DLSKNQIR--------------SLYLH--------PS-FGKLNSLKSIDFSSNQIFLVCE 165
Query: 307 HSLGNLT--NLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLA 364
H L L L+ + NSL + + ++ N
Sbjct: 166 HELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGN-- 223
Query: 365 TLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNL--TNLATLDLYDNSLS 422
+SN++ S L + G++ + ++ L +++ LDL +
Sbjct: 224 ----FSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVF 279
Query: 423 GSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRS 482
F L+ L L+L YNK++ + L NL L L N L L
Sbjct: 280 SLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPK 339
Query: 483 ISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSL-----FDSIP------SELGNLRSL 531
++ + L N ++ Q+ L L L L +N+L SIP ++L L +
Sbjct: 340 VAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKI 399
Query: 532 ----SMLSFAYNKLSG--------SIPHSLGVLDLSSNHIVG----EIPTELGKLNFLIK 575
+++ + N+L +PH L +L L+ N + P+E L +
Sbjct: 400 NLTANLIHLSENRLENLDILYFLLRVPH-LQILILNQNRFSSCSGDQTPSENPSLE---Q 455
Query: 576 LILAQNQLSGQLSPKLG-----SLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQ 630
L L +N L +L L+ L+ L L+ N L++ P F +L L L+L++N+
Sbjct: 456 LFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNR 515
Query: 631 FS----RGIPIKLEEL---------------IHLSELDLSHN 653
+ +P LE L + LS LD++HN
Sbjct: 516 LTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHN 557
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And
Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In
Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDF IG+GG G VY A +G++ A+K + LNE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 874 RN----IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISD----------AL 919
+ + Y F + + S + L N DL + + + +D L
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDSSNWTELAGTYGYV 976
+MHN +V+RD+ N+LLD +SD G+A KP +S GT+GY+
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYM 357
Query: 977 APE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
APE L + D +S G + ++++G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 92/222 (41%), Gaps = 42/222 (18%)
Query: 808 EEIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVK 866
EE+ AT+ +G+G G V++ E +G AVKK + F+ E L
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-----FRAEELMACA 121
Query: 867 ALTEIRHRNIVKFYGFCSHVRH--------------SLAMILSNNAAAKDLGWTRRMNVI 912
LT R IV YG VR SL ++ + R + +
Sbjct: 122 GLTSPR---IVPLYG---AVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYL 172
Query: 913 KGISDALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIAKFLKPDSSNWTELAG 971
+ L Y+H+ I+H D+ + NVLL D + A + DFG A L+PD L G
Sbjct: 173 GQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 972 TY-----GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y ++APE+ K DV+S + L ++ G HP
Sbjct: 230 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
NDF IG+GG G VY A +G++ A+K + LNE L+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 874 RN----IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISD----------AL 919
+ + Y F + + S + L N DL + + + +D L
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL---KPDSSNWTELAGTYGYV 976
+MHN +V+RD+ N+LLD +SD G+A KP +S GT+GY+
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYM 357
Query: 977 APE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
APE L + D +S G + ++++G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 135/375 (36%), Gaps = 55/375 (14%)
Query: 179 NSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPH-SLGNLTNLATLYLHNNSLFDSIPSEL 237
NS+++ + F L+ L L + I + + L++L L L N
Sbjct: 40 NSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAF 99
Query: 238 GNLRSLSMLSLGYNKLSGSI--PHSLGNLTNLATLYLYENSLSGSIPSEFG-NLRSLSML 294
L +L +L+L L G++ + LT+L L L +N++ P+ F N+R +L
Sbjct: 100 NGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVL 159
Query: 295 NLGYNKLNGIIPHSLGNL----------------------------------TNLATLYI 320
+L +NK+ I L N T++ TL +
Sbjct: 160 DLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDL 219
Query: 321 HNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYL---------------SNLAT 365
N S+ + S G+ S + T
Sbjct: 220 SGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKT 279
Query: 366 LYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSI 425
L + +F + S + L L+L N+++ ++ LT+L L+L N L GSI
Sbjct: 280 CDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL-GSI 338
Query: 426 PSE-FGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSIS 484
S F NL L L L YN + S L NL L L N L G L S+
Sbjct: 339 DSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQ 398
Query: 485 NLALNNNKLSGSIPQ 499
+ L+ N S P+
Sbjct: 399 KIWLHTNPWDCSCPR 413
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 130/323 (40%), Gaps = 29/323 (8%)
Query: 360 LSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSI--PHSLGNLTNLATLDLY 417
LS+L L L N L +L +L+L L G++ + LT+L L L
Sbjct: 78 LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLR 137
Query: 418 DNSLSGSIPSEFG-NLRSLSTLSLGYNKLSGSIPHSLGN-------LTNLDALYLYDNS- 468
DN++ P+ F N+R L L +NK+ L N L L ++ L D +
Sbjct: 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNE 197
Query: 469 --LSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN------LSNLVILYLYNNSLFDS 520
L G SI+ L L+ N S+ + + + +L++ YN
Sbjct: 198 YWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYN------ 251
Query: 521 IPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQ 580
+ S G+ +F + L S + DLS + I + + L +L LAQ
Sbjct: 252 MGSSFGHTNFKDPDNFTFKGLEAS---GVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQ 308
Query: 581 NQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLE 640
N+++ L L L+LS N L + + F NL KL L+LS N
Sbjct: 309 NEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL 368
Query: 641 ELIHLSELDLSHNFLREAIPSQI 663
L +L EL L N L+ ++P I
Sbjct: 369 GLPNLKELALDTNQLK-SVPDGI 390
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE--LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKA 867
+ RA ++ IG+G G V+KA G VA+K+ GE + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ-TGEEGMPLSTIREVAV 64
Query: 868 LTEIR---HRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVI-------KGISD 917
L + H N+V+ + C+ R L+ D T ++ + + I D
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 918 -------ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970
L ++H+ +VHRD+ +N+L+ + ++DFG+A+ + T +
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVV 180
Query: 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 1006
T Y APE+ D++S G + E+ + K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent Kinase
6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE--LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKA 867
+ RA ++ IG+G G V+KA G VA+K+ GE + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ-TGEEGMPLSTIREVAV 64
Query: 868 LTEIR---HRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVI-------KGISD 917
L + H N+V+ + C+ R L+ D T ++ + + I D
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 918 -------ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970
L ++H+ +VHRD+ +N+L+ + ++DFG+A+ + T +
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVV 180
Query: 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 1006
T Y APE+ D++S G + E+ + K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 810 IIRATNDFDDEHCIGKGGQGSVYKAE--LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKA 867
+ RA ++ IG+G G V+KA G VA+K+ GE + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ-TGEEGMPLSTIREVAV 64
Query: 868 LTEIR---HRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVI-------KGISD 917
L + H N+V+ + C+ R L+ D T ++ + + I D
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 918 -------ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970
L ++H+ +VHRD+ +N+L+ + ++DFG+A+ + T +
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVV 180
Query: 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 1006
T Y APE+ D++S G + E+ + K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G+V+KA+ + EIVA+K+ E L E+ L E++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHD 68
Query: 882 FCSHVRHSLAMILSN---------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
H L ++ ++ DL + + + L + H+ ++H
Sbjct: 69 VL-HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLH 124
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV-TEKCD 991
RD+ +N+L++ + E ++DFG+A+ ++ T Y P++ + K+ + D
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G + E+ P
Sbjct: 185 MWSAGCIFAELANAARP 201
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVT 987
+HRD++++N+LL + DFG+A+ +K D SN+ ++APE + T
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKND-SNYVVKGNARLPVKWMAPESIFNCVYT 248
Query: 988 EKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DV+S+G+ E+ G P + + ML P P+
Sbjct: 249 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF-RMLSPE-HAPA-------- 298
Query: 1047 SIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ ++ +C D +P RPT ++ QL++
Sbjct: 299 EMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 111/276 (40%), Gaps = 75/276 (27%)
Query: 842 VAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH--------------- 885
VAVK S + ++ ++E+K ++ + +H NIV G C+H
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 886 ----VRHSLAMILSNNA---AAKDLGWTRRMNVIKGISDALSYMHN-DCFPPIVHRDISS 937
+R ++ ++ A A L ++ ++ ++++ + +C +HRD+++
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 192
Query: 938 KNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEKCDVYSF 995
+NVLL + A + DFG+A+ + DS+ + ++APE + T + DV+S+
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 996 GVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE----- 1050
G+L E+ L LN P P +V K +V+
Sbjct: 253 GILLWEIFS---------------LGLN-----------PYPGILVNSKFYKLVKDGYQM 286
Query: 1051 ------------VAISCLDENPESRPTMPKVSQLLK 1074
+ +C P RPT ++ L+
Sbjct: 287 AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIAKFLKPDSSNWTELAGTY-- 973
+ L Y+H I+H D+ + NVLL D + A + DFG A L+PD + L G Y
Sbjct: 175 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 974 ---GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++APE+ K D++S + L ++ G HP
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIAKFLKPDSSNWTELAGTY-- 973
+ L Y+H I+H D+ + NVLL D + A + DFG A L+PD + L G Y
Sbjct: 161 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 974 ---GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++APE+ K D++S + L ++ G HP
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 917 DALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIAKFLKPDSSNWTELAGTY-- 973
+ L Y+H I+H D+ + NVLL D + A + DFG A L+PD + L G Y
Sbjct: 177 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 974 ---GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
++APE+ K D++S + L ++ G HP
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 61/295 (20%)
Query: 823 IGKGGQGSVYKAEL------ASGEIVAVKKF-HSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G V KA A VAVK + P E+ ++ L+E L ++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL---RDLLSEFNVLKQVNHPH 87
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------------------- 913
++K YG CS L +I+ G+ R +
Sbjct: 88 VIKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 914 -----------GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962
IS + Y+ +VHRD++++N+L+ + +SDFG+++ + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 963 SSNWTELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXX 1019
S G ++A E + T + DV+SFGVL E++ G +P I
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 1020 LNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
L R+ P ++ + + + C + P+ RP +S+ L+
Sbjct: 264 L-------LKTGHRMERPDNCSEE----MYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A Small
Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of
Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A-
443654
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H89 Protein Kinase Inhibitor
N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H7 Protein Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H8 Protein Kinase Inhibitor
[n-(2-Methylamino)ethyl]-5- Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase (Pka)
In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKF-----HSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G VYKA + + E VA+K+ +PG + EV L E++HRNI
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA------IREVSLLKELQHRNI 95
Query: 877 VKFYGFCSHVRHSLAMIL--SNNAAAK--DLGWTRRMNVIKGISDALSYMHNDCFP-PIV 931
++ H H L +I + N K D M VIK L N C +
Sbjct: 96 IELKSVIHH-NHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCL 154
Query: 932 HRDISSKNVLLDFDNEAH-----VSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMK 985
HRD+ +N+LL + + + DFG+A+ +T T Y PE L +
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRH 214
Query: 986 VTEKCDVYSFGVLALEVI 1003
+ D++S + E++
Sbjct: 215 YSTSVDIWSIACIWAEML 232
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N-
Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+++D V+DFG+AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 61/295 (20%)
Query: 823 IGKGGQGSVYKAEL------ASGEIVAVKKF-HSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G V KA A VAVK + P E+ ++ L+E L ++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL---RDLLSEFNVLKQVNHPH 87
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------------------- 913
++K YG CS L +I+ G+ R +
Sbjct: 88 VIKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 914 -----------GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962
IS + Y+ +VHRD++++N+L+ + +SDFG+++ + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 963 SSNWTELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXX 1019
S G ++A E + T + DV+SFGVL E++ G +P I
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 1020 LNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
L R+ P ++ + + + C + P+ RP +S+ L+
Sbjct: 264 L-------LKTGHRMERPDNCSEE----MYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 40/271 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR--NIVKFY 880
IG GG V++ +I A+K + T + NE+ L +++ I++ Y
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 78
Query: 881 GFCSHVRHSLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
+ ++ ++ N K + R + K + +A+ +H IVH
Sbjct: 79 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHS 135
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVTEK-- 989
D+ N L+ D + DFGIA ++PD+++ + GT Y+ PE M + +
Sbjct: 136 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 194
Query: 990 ---------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDP--RLPTPS 1038
DV+S G + + GK P I +N L ++DP + P
Sbjct: 195 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPD 247
Query: 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
+D + +V CL +P+ R ++P++
Sbjct: 248 IPEKD----LQDVLKCCLKRDPKQRISIPEL 274
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKXVNHKNIISL 88
Query: 880 YGFCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ + L M L + +L R ++ + + ++H+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHS---A 145
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+++D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIISK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr-
3451
Length = 353
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKXVNHKNIISL 88
Query: 880 YGFCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ V + ++ +N +L R ++ + + ++H+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 145
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 359 YLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYD 418
YL+NL L L N + D P L NL ++ L L N L ++ L ++ TLDL
Sbjct: 61 YLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTS 116
Query: 419 NSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIG 478
++ P L +L L L N+++ P L LTNL L + + +S P +
Sbjct: 117 TQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LA 170
Query: 479 NLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAY 538
NL ++ L ++NK+S P L +L NL+ ++L NN + D P L N +L +++
Sbjct: 171 NLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
Query: 539 NKLS 542
++
Sbjct: 227 QTIT 230
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+NL L L DN ++D P NL ++ L L N ++ L ++ TL L +
Sbjct: 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTST 117
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287
+ D P L L +L +L L N+++ P L LTNL L + +S P N
Sbjct: 118 QITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LAN 171
Query: 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIP 330
L L+ L NK++ I P L +L NL +++ NN +S P
Sbjct: 172 LSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP 212
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 93 IGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRXXXXXXXXX 152
I + +K LDL+S P + LS L+ L L NQ+ P +
Sbjct: 103 IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158
Query: 153 XXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHS 212
DL P L NLS L TL DN +SD P +L +L + L N+ S P
Sbjct: 159 GNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-- 212
Query: 213 LGNLTNLATLYLHNNSL 229
L N +NL + L N ++
Sbjct: 213 LANTSNLFIVTLTNQTI 229
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 902 DLGWTRR--MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 109 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S TE T YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 166 KETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL ++ G P
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
Length = 314
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 61/295 (20%)
Query: 823 IGKGGQGSVYKAEL------ASGEIVAVKKF-HSPLPGEMTFQQEFLNEVKALTEIRHRN 875
+G+G G V KA A VAVK + P E+ ++ L+E L ++ H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL---RDLLSEFNVLKQVNHPH 87
Query: 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------------------- 913
++K YG CS L +I+ G+ R +
Sbjct: 88 VIKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 914 -----------GISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962
IS + Y+ +VHRD++++N+L+ + +SDFG+++ + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 963 SSNWTELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXX 1019
S G ++A E + T + DV+SFGVL E++ G +P I
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 1020 LNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
L R+ P ++ + + + C + P+ RP +S+ L+
Sbjct: 264 L-------LKTGHRMERPDNCSEE----MYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 817 FDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
F+ E +G+G VY+ + + K + + + ++ E+ L + H NI
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQ----KPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 877 VKFYG-FCSHVRHSLAMILSNNAAAKDL-----GWTRR--MNVIKGISDALSYMHNDCFP 928
+K F + SL + L D ++ R + +K I +A++Y+H +
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN--- 167
Query: 929 PIVHRDISSKNVLLDF---DNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK 985
IVHRD+ +N+L D ++DFG++K ++ T + GT GY APE+
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAPEILRGCA 226
Query: 986 VTEKCDVYSFGVLALEVIKGKHP 1008
+ D++S G++ ++ G P
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEP 249
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 912 IKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTE 968
I+ I ++++Y H++ IVHR++ +N+LL + ++DFG+A + DS W
Sbjct: 111 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHG 166
Query: 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
AGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 912 IKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTE 968
I+ I ++++Y H++ IVHR++ +N+LL + ++DFG+A + DS W
Sbjct: 110 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHG 165
Query: 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
AGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 912 IKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTE 968
I+ I ++++Y H++ IVHR++ +N+LL + ++DFG+A + DS W
Sbjct: 111 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHG 166
Query: 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
AGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 81
Query: 880 YGFCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ V + ++ +N +L R ++ + + ++H+
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHS---A 138
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 139 GIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 198 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein
Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 358 GYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATLDL 416
G +N LYL+ N + P +L +L L LG N+L G++P + +LT L LDL
Sbjct: 37 GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDL 95
Query: 417 YDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIP-G 475
N L+ + F L L L + NKL+ +P + LT+L L L N L SIP G
Sbjct: 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHG 153
Query: 476 EIGNLRSISNLALNNN 491
L S+++ L N
Sbjct: 154 AFDRLSSLTHAYLFGN 169
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 545 IPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSS 604
IP + +L L N I P L L +L L NQL SL QL LDL +
Sbjct: 38 IPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97
Query: 605 NRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660
N+L+ F LV L L + N+ + +P +E L HL+ L L N L+ +IP
Sbjct: 98 NQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLK-SIP 151
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 395 NKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSL- 453
+K S+P G TN L L+DN ++ P F +L +L L LG N+L G++P +
Sbjct: 28 SKRHASVP--AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 454 GNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLY 513
+LT L L L N L+ L + L + NKL+ +P+ + L++L L L
Sbjct: 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALD 143
Query: 514 NNSLFDSIPSELGNLRSLSMLSFAY 538
N L SIP G LS L+ AY
Sbjct: 144 QNQL-KSIPH--GAFDRLSSLTHAY 165
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 203 NKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL- 261
+K S+P G TN LYLH+N + P +L +L L LG N+L G++P +
Sbjct: 28 SKRHASVP--AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 262 GNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIH 321
+LT L L L N L+ + F L L L + NKL +P + LT+L L +
Sbjct: 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALD 143
Query: 322 NNSLSGSIP 330
N L SIP
Sbjct: 144 QNQLK-SIP 151
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 23/164 (14%)
Query: 443 NKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSL- 501
+K S+P G TN LYL+DN ++ PG +L ++ L L +N+L G++P +
Sbjct: 28 SKRHASVP--AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 502 GNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVG 561
+L+ L +L L N L + L L L NKL+
Sbjct: 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT------------------- 125
Query: 562 EIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSN 605
E+P + +L L L L QNQL L+ L H L N
Sbjct: 126 ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
Score = 43.1 bits (100), Expect = 9e-04, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 25/155 (16%)
Query: 169 SNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNS 228
+N L+L+DN ++ P F +L +L L LG N+ G++P
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALP----------------VG 82
Query: 229 LFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNL 288
+FDS L L++L LG N+L+ L +L L++ N L+ +P L
Sbjct: 83 VFDS-------LTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERL 134
Query: 289 RSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNN 323
L+ L L N+L I + L++L Y+ N
Sbjct: 135 THLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 491 NKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIP---- 546
+K S+P G +N ILYL++N + P +L +L L N+L G++P
Sbjct: 28 SKRHASVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 547 ---HSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLS 603
L VLDL +N + +L L +L + N+L+ +L + L L HL L
Sbjct: 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALD 143
Query: 604 SNRLSNSIPK-SFGNLVKLHYLNLSNN 629
N+L SIP +F L L + L N
Sbjct: 144 QNQL-KSIPHGAFDRLSSLTHAYLFGN 169
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+++D V+DFG+AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKXVNHKNIISL 88
Query: 880 YGFCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ + L M L + +L R ++ + + ++H+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-- 146
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 40/271 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR--NIVKFY 880
IG GG V++ +I A+K + T + NE+ L +++ I++ Y
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 75
Query: 881 GFCSHVRHSLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
+ ++ ++ N K + R + K + +A+ +H IVH
Sbjct: 76 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHS 132
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVTEK-- 989
D+ N L+ D + DFGIA ++PD+++ + GT Y+ PE M + +
Sbjct: 133 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 191
Query: 990 ---------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDP--RLPTPS 1038
DV+S G + + GK P I +N L ++DP + P
Sbjct: 192 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPD 244
Query: 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
+D + +V CL +P+ R ++P++
Sbjct: 245 IPEKD----LQDVLKCCLKRDPKQRISIPEL 271
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A + G VAVKK P + T + E+ L + H+NI+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ-THAKRAYRELVLLKCVNHKNIISLLN 88
Query: 882 FCSHVRH-------SLAMILSNNAAAK----DLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ + L M L + + +L R ++ + + ++H+ I
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGI 145
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW--TELAGTYGYVAPELAYTMKVTE 988
+HRD+ N+++ D + DFG+A + S+N+ T T Y APE+ M E
Sbjct: 146 IHRDLKPSNIVVKSDCTLKILDFGLA---RTASTNFMMTPYVVTRYYRAPEVILGMGYKE 202
Query: 989 KCDVYSFGVLALEVIKG 1005
D++S G + E++KG
Sbjct: 203 NVDIWSVGCIMGELVKG 219
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y-
27632
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTW-XLCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+L+D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVT 987
+HRD++++N+LL + DFG+A+ +K D SN+ ++APE + T
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKND-SNYVVKGNARLPVKWMAPESIFNCVYT 243
Query: 988 EKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DV+S+G+ E+ G P + + ML P P+
Sbjct: 244 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF-RMLSPE-HAPA-------- 293
Query: 1047 SIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ ++ +C D +P RPT ++ QL++
Sbjct: 294 EMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVT 987
+HRD++++N+LL + DFG+A+ +K D SN+ ++APE + T
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKND-SNYVVKGNARLPVKWMAPESIFNCVYT 241
Query: 988 EKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DV+S+G+ E+ G P + + ML P P+
Sbjct: 242 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF-RMLSPE-HAPA-------- 291
Query: 1047 SIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ ++ +C D +P RPT ++ QL++
Sbjct: 292 EMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA------HVSDFGIAKFLKPDSS 964
V+ I + Y+H+ +VHRD+ N+L + +E+ + DFG AK L+ ++
Sbjct: 126 VLHTIGKTVEYLHSQ---GVVHRDLKPSNIL--YVDESGNPECLRICDFGFAKQLRAENG 180
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
T +VAPE+ E CD++S G+L ++ G P
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVT 987
+HRD++++N+LL + DFG+A+ +K D SN+ ++APE + T
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKND-SNYVVKGNARLPVKWMAPESIFNCVYT 248
Query: 988 EKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DV+S+G+ E+ G P + + ML P P+
Sbjct: 249 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF-RMLSPE-HAPA-------- 298
Query: 1047 SIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ ++ +C D +P RPT ++ QL++
Sbjct: 299 EMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 105/281 (37%), Gaps = 83/281 (29%)
Query: 842 VAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNAAA 900
VAVK S + ++ ++E+K ++ + +H NIV G C+H ++++
Sbjct: 79 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTH--GGPVLVITEYCCY 134
Query: 901 KDL-GWTRRMNVIKGISDALSYMHNDCFPP---------------------------IVH 932
DL + RR L Y +N P +H
Sbjct: 135 GDLLNFLRRKR-----PPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIH 189
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTEKC 990
RD++++NVLL + A + DFG+A+ + DS+ + ++APE + T +
Sbjct: 190 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 249
Query: 991 DVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050
DV+S+G+L E+ L LN P P +V K +V+
Sbjct: 250 DVWSYGILLWEIFS---------------LGLN-----------PYPGILVNSKFYKLVK 283
Query: 1051 -----------------VAISCLDENPESRPTMPKVSQLLK 1074
+ +C P RPT ++ L+
Sbjct: 284 DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA------HVSDFGIAKFLKPDSS 964
V+ I + Y+H+ +VHRD+ N+L + +E+ + DFG AK L+ ++
Sbjct: 126 VLHTIGKTVEYLHSQ---GVVHRDLKPSNIL--YVDESGNPECLRICDFGFAKQLRAENG 180
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
T +VAPE+ E CD++S G+L ++ G P
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+++D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 135/344 (39%), Gaps = 44/344 (12%)
Query: 374 FDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATL-DLYDNSLSGSIPSEFGNL 432
FDS + N LS+ +N L S SL L T D+ D +S ++ +
Sbjct: 196 FDSTIFQSLNFGGTPNLSVIFNGLQNSTTQSLW----LGTFEDIDDEDISSAMLKGLCEM 251
Query: 433 RSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNK 492
S+ +L+L ++ S + T L L L L G +P + L + L L+ N
Sbjct: 252 -SVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNH 309
Query: 493 LSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVL 552
S N +L LY+ GN++ L + KL +L L
Sbjct: 310 FDQLCQISAANFPSLTHLYIR------------GNVKKLHLGVGCLEKLG-----NLQTL 352
Query: 553 DLSSNHIVGE--IPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNS 610
DLS N I +L L+ L L L+ N+ G S QLE LDL+ RL +
Sbjct: 353 DLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHIN 412
Query: 611 IPKS-FGNLVKLHYLNL-------SNNQFSRGIPIKLEELIHLSELDLSHNFLREAIPSQ 662
P+S F NL L LNL SN G+P+ L L+L N ++ ++
Sbjct: 413 APQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPV-------LRHLNLKGNHFQDGTITK 465
Query: 663 ICIMQXXXXXXXXXXXXVGLI---PSCFEKMHGLLRIDISYNEL 703
++Q GL+ F + + +D+S+N L
Sbjct: 466 TNLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSL 509
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 121/306 (39%), Gaps = 41/306 (13%)
Query: 386 SLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKL 445
S+ L+L ++ S + T L LDL L G +PS L L L L N
Sbjct: 252 SVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHF 310
Query: 446 SGSIPHSLGNLTNLDALYLYDN----SLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSL 501
S N +L LY+ N L ++GNL+++ +L+ N+ + S L
Sbjct: 311 DQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTL-DLSHNDIEASDCCSLQL 369
Query: 502 GNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIP-------HSLGVL-- 552
NLS+L L L +N L +L A+ +L + P H L VL
Sbjct: 370 KNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNL 429
Query: 553 -----DLSSNHIVGEIPT--------------ELGKLNFLIK------LILAQNQLSGQL 587
D S+ H++ +P + K N L LIL+ L
Sbjct: 430 TYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSID 489
Query: 588 SPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSE 647
SL ++ H+DLS N L+ S +L + YLNL+ N + P L L S
Sbjct: 490 QQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKGI-YLNLAANSINIISPRLLPILSQQST 548
Query: 648 LDLSHN 653
++LSHN
Sbjct: 549 INLSHN 554
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 124/322 (38%), Gaps = 33/322 (10%)
Query: 242 SLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKL 301
S+ L+L ++ S + T L L L L G +PS L L L L N
Sbjct: 252 SVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHF 310
Query: 302 NGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLS 361
+ + S N +L LYI N + L L
Sbjct: 311 DQLCQISAANFPSLTHLYIRGNVKKLHLGV-----------------------GCLEKLG 347
Query: 362 NLATLYLYSNSL--FDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDN 419
NL TL L N + D +L NL L L+L +N+ G + L LDL
Sbjct: 348 NLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFT 407
Query: 420 SLSGSIP-SEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIG 478
L + P S F NL L L+L Y L S H L L L L L N +
Sbjct: 408 RLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTN 467
Query: 479 NLRSISNLA---LNNNKLSGSIPQSLGNLSNLVILYLYNNSL-FDSIPSELGNLRSLSML 534
L+++ +L L++ L Q+ +L + + L +NSL DSI S L +L+ + L
Sbjct: 468 LLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDS-LSHLKGI-YL 525
Query: 535 SFAYNKLSGSIPHSLGVLDLSS 556
+ A N ++ P L +L S
Sbjct: 526 NLAANSINIISPRLLPILSQQS 547
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 55/130 (42%), Gaps = 9/130 (6%)
Query: 185 IPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN----SLFDSIPSELGNL 240
+PS L L L L N F S N +L LY+ N L +LGNL
Sbjct: 290 LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNL 349
Query: 241 RSLSMLSLGYNKLSGSIPHS--LGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGY 298
++ L L +N + S S L NL++L TL L N G F L +L+L +
Sbjct: 350 QT---LDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAF 406
Query: 299 NKLNGIIPHS 308
+L+ P S
Sbjct: 407 TRLHINAPQS 416
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 139/381 (36%), Gaps = 75/381 (19%)
Query: 377 IPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLS 436
IP L N + L +N L + L NL LDL ++ F + LS
Sbjct: 24 IPDTLPN--TTEFLEFSFNFLPTIHNRTFSRLMNLTFLDLTRCQINWIHEDTFQSHHQLS 81
Query: 437 TLSLGYNKL------SGSIPHSLG------------------NLTNLDALYLYDNSLSG- 471
TL L N L S + P SL NL NL++LYL N +S
Sbjct: 82 TLVLTGNPLIFMAETSLNGPKSLKHLFLIQTGISNLEFIPVHNLENLESLYLGSNHISSI 141
Query: 472 SIPGEIGNLRSISNLALNNNKL---SGSIPQSLGNLSNLVILYLYNN------SLFDSIP 522
P + R++ L NN + S +SL NL + + NN FDS
Sbjct: 142 KFPKDFP-ARNLKVLDFQNNAIHYISREDMRSLEQAINLSLNFNGNNVKGIELGAFDSTI 200
Query: 523 SELGNLRSLSMLSFAYNKLSGSIPHSLGV--------LDLSSNHIVGEIPTELGKLNFLI 574
+ N LS +N L S SL + D+SS + G + LN
Sbjct: 201 FQSLNFGGTPNLSVIFNGLQNSTTQSLWLGTFEDIDDEDISSAMLKGLCEMSVESLN--- 257
Query: 575 KLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRG 634
L +++ S S QL+ LDL++ L +P L L L LS N F +
Sbjct: 258 ---LQEHRFSDISSTTFQCFTQLQELDLTATHLK-GLPSGMKGLNLLKKLVLSVNHFDQL 313
Query: 635 IPIKLEELIHLSELDLSHNFLREAIPSQICIMQXXXXXXXXXXXXVGLIPSCFEKMHGLL 694
I L+H ++R + + L C EK+ L
Sbjct: 314 CQISAANFP-----SLTHLYIRGNVKK------------------LHLGVGCLEKLGNLQ 350
Query: 695 RIDISYNELQGPIPNSIAFRD 715
+D+S+N+++ S+ ++
Sbjct: 351 TLDLSHNDIEASDCCSLQLKN 371
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 882 FCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ V + ++ +N +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ E+ Y Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKG 1005
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYTMKVT 987
+HRD++++N+LL + DFG+A+ +K D SN+ ++APE + T
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKND-SNYVVKGNARLPVKWMAPESIFNCVYT 225
Query: 988 EKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
+ DV+S+G+ E+ G P + + ML P P+
Sbjct: 226 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF-RMLSPE-HAPA-------- 275
Query: 1047 SIVEVAISCLDENPESRPTMPKVSQLLK 1074
+ ++ +C D +P RPT ++ QL++
Sbjct: 276 EMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK-FLKPDSSNWTELAGTYGYV 976
AL ++H I++RDI +N+LLD + ++DFG++K F+ ++ + GT Y+
Sbjct: 171 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 977 APELAYTMKV--TEKCDVYSFGVLALEVIKGKHP 1008
AP++ + D +S GVL E++ G P
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 844 VKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN------ 897
+KK S ++E EV L ++ H N++ + + R + +IL
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILELVSGGELF 103
Query: 898 ---AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN----EAHV 950
A + L + IK I D ++Y+H I H D+ +N++L N +
Sbjct: 104 DFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 951 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 161 IDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRR--MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 110 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 166
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 167 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRR--MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 109 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 166 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRR--MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 125 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 181
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 182 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRR--MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 116 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 172
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 173 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRR--MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 115 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 171
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 172 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRR--MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 168 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRR--MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 168 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRR--MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 117 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 173
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 174 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 844 VKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN------ 897
+KK S ++E EV L ++ H N++ + + R + +IL
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILELVSGGELF 103
Query: 898 ---AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN----EAHV 950
A + L + IK I D ++Y+H I H D+ +N++L N +
Sbjct: 104 DFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 951 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 161 IDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 844 VKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN------ 897
+KK S ++E EV L ++ H N++ + + R + +IL
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILELVSGGELF 103
Query: 898 ---AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN----EAHV 950
A + L + IK I D ++Y+H I H D+ +N++L N +
Sbjct: 104 DFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 951 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 161 IDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 844 VKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN------ 897
+KK S ++E EV L ++ H N++ + + R + +IL
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILELVSGGELF 103
Query: 898 ---AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN----EAHV 950
A + L + IK I D ++Y+H I H D+ +N++L N +
Sbjct: 104 DFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 951 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 161 IDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 915 ISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG 974
I+ AL Y+H+ IV+RD+ +N+LLD ++DFG+ K +S + GT
Sbjct: 148 IASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPE 204
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y+APE+ + D + G + E++ G P
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 134/321 (41%), Gaps = 48/321 (14%)
Query: 354 PPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLAT 413
P + S LA L NS+ P L L +L+L +N+LS + TNL
Sbjct: 42 PTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTE 101
Query: 414 LDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHS--------------------- 452
LDL NS+ + F N ++L L L +N LS + +
Sbjct: 102 LDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALR 161
Query: 453 ------LGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSL-GNLS 505
LGN ++L L L N L PG + + L LNN +L+ + + L LS
Sbjct: 162 SEELEFLGN-SSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELS 220
Query: 506 NLVI--LYLYNNSLFDSIPSELGNLR--SLSMLSFAYNKL----SGSIPH--SLGVLDLS 555
N I L L NN L + S L+ +L+ L +YN L +GS + SL L L
Sbjct: 221 NTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLE 280
Query: 556 SNHIVGEIPTE---LGKLNFL-IKLILAQNQLSGQLSPKLGS-----LAQLEHLDLSSNR 606
N+I P L L +L +K + +S P + L LE+L++ N
Sbjct: 281 YNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNN 340
Query: 607 LSNSIPKSFGNLVKLHYLNLS 627
+ ++ +F LV L YL+LS
Sbjct: 341 IPSTKSNTFTGLVSLKYLSLS 361
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 132/298 (44%), Gaps = 19/298 (6%)
Query: 377 IPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLS 436
IP +L + ++++L+L +N+L P + + LA LD NS+S P L L
Sbjct: 19 IPDDLPS--NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLK 76
Query: 437 TLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGS 496
L+L +N+LS + TNL L L NS+ N +++ L L++N LS +
Sbjct: 77 VLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSST 136
Query: 497 IPQSLGNLSNLVILYLYNNSLFDSIPSE----LGN--LRSLSMLSFAYNKLSGSIPHSLG 550
+ L NL L L N + ++ SE LGN LR L + S + S ++G
Sbjct: 137 KLGTGVQLENLQELLLAKNKIL-ALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIG 195
Query: 551 VLD--LSSN-----HIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSL--AQLEHLD 601
L L +N H+ ++ EL + + L LA NQL L L LD
Sbjct: 196 KLFALLLNNAQLNPHLTEKLCWELSNTS-IQNLSLANNQLLATSESTFSGLKWTNLTQLD 254
Query: 602 LSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAI 659
LS N L + SF L L YL+L N R P L +L L L F ++++
Sbjct: 255 LSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSV 312
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 110/295 (37%), Gaps = 48/295 (16%)
Query: 54 NLTSIGLK-GMLHDF---SFSSFPHLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLF 109
NLT + L LHD SFS P L YL L +N + P +S L+YL L
Sbjct: 249 NLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFT 308
Query: 110 FGTIP----PEIGHLSY--LKTLQLFENQLNGSIPYEIGRXXXXXXXXXXXXXXEDLIPP 163
++ P I S+ LK L+ + N + +IP +
Sbjct: 309 KQSVSLASHPNIDDFSFQWLKYLE-YLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFT-- 365
Query: 164 SLGNLSN----------LDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSL 213
SL L+N L TL+L N +S F L L +L LG N+ +
Sbjct: 366 SLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLS--- 422
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
E LR++ + L YNK S + +L L L
Sbjct: 423 --------------------GQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLR 462
Query: 274 ENSLSGS--IPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLS 326
+L PS F LR+L++L+L N + I L L NL L +N+L+
Sbjct: 463 RVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLA 517
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 122/313 (38%), Gaps = 52/313 (16%)
Query: 29 NNVTKTSPCAWVGIHCNRG---GRVNSINLTSIGLKGMLHDFSFSSFPHLAYLDLWHNQL 85
NN+ + SP ++ G+ R R + S+ + DFSF +L YL++ N +
Sbjct: 282 NNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNI 341
Query: 86 YGNIPPQIGNISRLKYLDLSSNLF-FGTIPPE----IGHLSYLKTLQLFENQL----NGS 136
+ LKYL LS T+ E + H S L TL L +N + NG+
Sbjct: 342 PSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAH-SPLLTLNLTKNHISKIANGT 400
Query: 137 IPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLSNLDT-LHLYDNSLSDSIPSEFGNLRSL 195
+ LG L LD L+ + LS E+ LR++
Sbjct: 401 FSW-------------------------LGQLRILDLGLNEIEQKLSG---QEWRGLRNI 432
Query: 196 SMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSL--FDSIPSELGNLRSLSMLSLGYNKL 253
+ L YNK+ S + +L L L +L D PS LR+L++L L N +
Sbjct: 433 FEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNI 492
Query: 254 SGSIPHSLGNLTNLATLYLYENSLS--------GSIPSEFGNLRSLSMLNLGYNKLNGII 305
+ L L NL L N+L+ G + L L +LNL N L+ I
Sbjct: 493 ANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIP 552
Query: 306 PHSLGNLTNLATL 318
NL L ++
Sbjct: 553 VGVFKNLFELKSI 565
Score = 33.1 bits (74), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 193/510 (37%), Gaps = 52/510 (10%)
Query: 161 IPPSLGNLSNLDTLHLYD---NSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLT 217
+PP+ N + L + D NS+S P L L +L+L +N+ S + T
Sbjct: 40 LPPT--NFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCT 97
Query: 218 NLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSL 277
NL L L +NS+ + N ++L L L +N LS + + L NL L L +N +
Sbjct: 98 NLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKI 157
Query: 278 SG--SIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXX 335
S EF SL L+L N L P + L L ++N L+ + ++
Sbjct: 158 LALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCW 217
Query: 336 XXXXXXXXXXXXXXXXXIPPSLGYLS-----NLATLYLYSNSLFDSIPSELGNLRSLSML 390
+ S S NL L L N+L D L SL L
Sbjct: 218 ELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYL 277
Query: 391 SLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIP-SEFGNLRSLSTLSLGYNKLSGSI 449
SL YN + P S L+NL L L S+ + N+ S L Y
Sbjct: 278 SLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKY------- 330
Query: 450 PHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVI 509
L+ L + DN++ + L S+ L+L SL L+N
Sbjct: 331 ---------LEYLNMDDNNIPSTKSNTFTGLVSLKYLSL------SKTFTSLQTLTNETF 375
Query: 510 LYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLG---VLDLSSNHIVGEIP-T 565
+ L ++ L +L++ +K++ LG +LDL N I ++
Sbjct: 376 VSLAHSPLL-----------TLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQ 424
Query: 566 ELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNS--IPKSFGNLVKLHY 623
E L + ++ L+ N+ + + L+ L L L N P F L L
Sbjct: 425 EWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTI 484
Query: 624 LNLSNNQFSRGIPIKLEELIHLSELDLSHN 653
L+LSNN + LE L +L LD HN
Sbjct: 485 LDLSNNNIANINEDLLEGLENLEILDFQHN 514
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 844 VKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN------ 897
+KK S ++E EV L ++ H N++ + + R + +IL
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDVVLILELVSGGELF 103
Query: 898 ---AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN----EAHV 950
A + L + IK I D ++Y+H I H D+ +N++L N +
Sbjct: 104 DFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 951 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 161 IDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 882 FCSHVR-----HSLAMILS------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ + + +++ + +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---I 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKG 1005
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 912 IKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTE 968
I+ I +++++ H IVHRD+ +N+LL ++ ++DFG+A ++ D W
Sbjct: 109 IQQILESVNHCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
AGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 912 IKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTE 968
I+ I +++++ H IVHRD+ +N+LL ++ ++DFG+A ++ D W
Sbjct: 109 IQQILESVNHCH---LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
AGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into
Receptor Autoregulation
Length = 343
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 55/225 (24%)
Query: 823 IGKGGQGSVYKAELASG-------EIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875
IG+G G V++A A G +VAVK +M Q +F E + E + N
Sbjct: 55 IGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADM--QADFQREAALMAEFDNPN 111
Query: 876 IVKFYGFCS--------------------------HVRHSLAMI-LSNNAAAKD-----L 903
IVK G C+ H SL+ LS A L
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 904 GWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGI------AK 957
++ + + ++ ++Y+ F VHRD++++N L+ + ++DFG+ A
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
Query: 958 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 1002
+ K D ++ + ++ PE + + T + DV+++GV+ E+
Sbjct: 229 YYKADGNDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-(5-Methyl-
1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With (1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+++D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+++D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+++D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 27
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+++D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+++D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-Phenyl-C-(4-(
9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEK 989
+++RD+ +N+++D V+DFG AK +K W L GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 990 CDVYSFGVLALEVIKGKHP 1008
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 882 FCSHVR-----HSLAMILS------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ + + +++ + +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---I 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKG 1005
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK------FLKPDSSNWTELAGTYGYVAPELAYTM 984
+HRD++++NVL+ DN ++DFG+A+ + K ++ + ++APE +
Sbjct: 213 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDR 268
Query: 985 KVTEKCDVYSFGVLALEVI 1003
T + DV+SFGVL E+
Sbjct: 269 IYTHQSDVWSFGVLLWEIF 287
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 59/285 (20%), Positives = 112/285 (39%), Gaps = 84/285 (29%)
Query: 842 VAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH--------------- 885
VAVK S + ++ ++E+K ++ + +H NIV G C+H
Sbjct: 64 VAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 886 -----VRHSLAMILSNNAAAKD-----------LGWTRRMNVIKGISDALSYMHN-DCFP 928
R + AM+ + A +D L ++ ++ ++++ + +C
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC-- 179
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKV 986
+HRD++++NVLL + A + DFG+A+ + DS+ + ++APE +
Sbjct: 180 --IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 237
Query: 987 TEKCDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDKLI 1046
T + DV+S+G+L E+ L LN P P +V K
Sbjct: 238 TVQSDVWSYGILLWEIFS---------------LGLN-----------PYPGILVNSKFY 271
Query: 1047 SIVE-----------------VAISCLDENPESRPTMPKVSQLLK 1074
+V+ + +C P RPT ++ L+
Sbjct: 272 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 82
Query: 880 YGFCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ V + ++ +N +L R ++ + + ++H+
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 139
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 199 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 82
Query: 880 YGFCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ V + ++ +N +L R ++ + + ++H+
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 139
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 199 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 40/271 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN--IVKFY 880
IG GG V++ +I A+K + T + NE+ L +++ + I++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 122
Query: 881 GFCSHVRHSLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
+ ++ ++ N K + R + K + +A+ +H IVH
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHS 179
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVTEK-- 989
D+ N L+ D + DFGIA ++PD+++ + GT Y+ PE M + +
Sbjct: 180 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 990 ---------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDP--RLPTPS 1038
DV+S G + + GK P I +N L ++DP + P
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPD 291
Query: 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
+D + +V CL +P+ R ++P++
Sbjct: 292 IPEKD----LQDVLKCCLKRDPKQRISIPEL 318
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 81
Query: 880 YGFCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ V + ++ +N +L R ++ + + ++H+
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 138
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 139 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 198 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT Y+AP + +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPAIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 909 MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE 968
+++ I++A+ ++H+ ++HRD+ N+ D+ V DFG+ + D T
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 969 LA------------GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 1003
L GT Y++PE + + K D++S G++ E++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 812 RATNDFDDEHCIGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTE 870
R DF+ C+G+GG G V++A+ + A+K+ LP +++ + EVKAL +
Sbjct: 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAK 60
Query: 871 IRHRNIVKFY 880
+ H IV+++
Sbjct: 61 LEHPGIVRYF 70
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 61/280 (21%), Positives = 109/280 (38%), Gaps = 45/280 (16%)
Query: 823 IGKGGQGSVYKA---ELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G VY+ ++ GE VAVK + + + EFLNE + ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 79
Query: 877 VKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISDA 918
V+ G S + +L ++ NN + + I+D
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG--YV 976
++Y++ F VHRD++++N ++ D + DFG+ + + G ++
Sbjct: 140 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 977 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALD-EMLDPRL 1034
APE T D++SFGV+ E+ + P + L +D LD
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV----LKFVMDGGYLDQPD 252
Query: 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
P + ++ C NP+ RPT ++ LLK
Sbjct: 253 NCPE--------RVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 61/280 (21%), Positives = 109/280 (38%), Gaps = 45/280 (16%)
Query: 823 IGKGGQGSVYKA---ELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G VY+ ++ GE VAVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 877 VKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISDA 918
V+ G S + +L ++ NN + + I+D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG--YV 976
++Y++ F VHRD++++N ++ D + DFG+ + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 977 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALD-EMLDPRL 1034
APE T D++SFGV+ E+ + P + L +D LD
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV----LKFVMDGGYLDQPD 255
Query: 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
P + ++ C NP+ RPT ++ LLK
Sbjct: 256 NCPE--------RVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 882 FCSHVR-----HSLAMILS------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ + + +++ + +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKG 1005
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN---------AAAKDLGWTRR 908
++E EV L EIRH NI+ + + + + +IL A + L
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFEN-KTDVVLILELVSGGELFDFLAEKESLTEDEA 110
Query: 909 MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN----EAHVSDFGIAKFLKPDSS 964
+K I D + Y+H+ I H D+ +N++L N + DFGIA ++ +
Sbjct: 111 TQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GN 166
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN---------AAAKDLGWTRR 908
++E EV L EIRH NI+ + + + + +IL A + L
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFEN-KTDVVLILELVSGGELFDFLAEKESLTEDEA 117
Query: 909 MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN----EAHVSDFGIAKFLKPDSS 964
+K I D + Y+H+ I H D+ +N++L N + DFGIA ++ +
Sbjct: 118 TQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GN 173
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 61/282 (21%), Positives = 112/282 (39%), Gaps = 49/282 (17%)
Query: 823 IGKGGQGSVYKA---ELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G VY+ ++ GE VAVK + + + EFLNE + ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 81
Query: 877 VKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISDA 918
V+ G S + +L ++ NN + + I+D
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----YG 974
++Y++ F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 142 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 196
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALD-EMLDP 1032
++APE T D++SFGV+ E+ + P + L +D LD
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV----LKFVMDGGYLDQ 252
Query: 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
P + ++ C NP+ RPT ++ LLK
Sbjct: 253 PDNCPE--------RVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 61/282 (21%), Positives = 112/282 (39%), Gaps = 49/282 (17%)
Query: 823 IGKGGQGSVYKA---ELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G VY+ ++ GE VAVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 877 VKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISDA 918
V+ G S + +L ++ NN + + I+D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----YG 974
++Y++ F VHRD++++N ++ D + DFG+ + + +++ G
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 197
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALD-EMLDP 1032
++APE T D++SFGV+ E+ + P + L +D LD
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV----LKFVMDGGYLDQ 253
Query: 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
P + ++ C NP+ RPT ++ LLK
Sbjct: 254 PDNCPE--------RVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 882 FCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ V + ++ +N +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKG 1005
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 882 FCSHVR-----HSLAMILS------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ + + +++ + +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKG 1005
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY--GYVAPELAYTMKVTE 988
+HRD++++NVL+ DN ++DFG+A+ + G ++APE + T
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTH 231
Query: 989 KCDVYSFGVLALEV 1002
+ DV+SFGVL E+
Sbjct: 232 QSDVWSFGVLLWEI 245
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 91
Query: 882 FCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ V + ++ +N +L R ++ + + ++H+ I
Sbjct: 92 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 148
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 991 DVYSFGVLALEVIKG 1005
D++S G + E+IKG
Sbjct: 208 DIWSVGCIMGEMIKG 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN---------AAAKDLGWTRR 908
++E EV L EIRH NI+ + + + + +IL A + L
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFEN-KTDVVLILELVSGGELFDFLAEKESLTEDEA 131
Query: 909 MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN----EAHVSDFGIAKFLKPDSS 964
+K I D + Y+H+ I H D+ +N++L N + DFGIA ++ +
Sbjct: 132 TQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GN 187
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
+ + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 188 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS--SNWTELAGTYGYVAPELAYTMKVTE 988
+HRD++++NVL+ +N ++DFG+A+ + N T ++APE + T
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTH 238
Query: 989 KCDVYSFGVLALEV 1002
+ DV+SFGVL E+
Sbjct: 239 QSDVWSFGVLMWEI 252
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 88
Query: 880 YGFCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ + L M L + +L R ++ + + ++H+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-- 146
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 882 FCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ V + ++ +N +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKG 1005
D++S G + E+IKG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDR 234
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 235 VYTHQSDVWSFGVLMWEI 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDR 234
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 235 VYTHQSDVWSFGVLMWEI 252
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMK--- 985
IVHRD+ +N+LLD D ++DFG + L P E+ GT Y+APE + +M
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAPEIIECSMNDNH 203
Query: 986 --VTEKCDVYSFGVLALEVIKGKHP 1008
++ D++S GV+ ++ G P
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMK--- 985
IVHRD+ +N+LLD D ++DFG + L P E+ GT Y+APE + +M
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAPEIIECSMNDNH 190
Query: 986 --VTEKCDVYSFGVLALEVIKGKHP 1008
++ D++S GV+ ++ G P
Sbjct: 191 PGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 429 FGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLAL 488
F ++ L +G+N + PH N+ L L L N LS G N ++ L++
Sbjct: 89 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148
Query: 489 NNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSG-SIPH 547
+NN L + ++L L L +N L +L + SL + +YN LS +IP
Sbjct: 149 SNNNLERIEDDTFQATTSLQNLQLSSNRL---THVDLSLIPSLFHANVSYNLLSTLAIPI 205
Query: 548 SLGVLDLSSNHI---VGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSS 604
++ LD S N I G + EL L L N L+ + L + L +DLS
Sbjct: 206 AVEELDASHNSINVVRGPVNVELTILK------LQHNNLTD--TAWLLNYPGLVEVDLSY 257
Query: 605 NRLSNSIPKSFGNLVKLHYLNLSNNQFSR----GIPIKLEELIHLSELDLSHNFL 655
N L + F + +L L +SNN+ G PI L LDLSHN L
Sbjct: 258 NELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPT-----LKVLDLSHNHL 307
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 35/289 (12%)
Query: 356 SLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATL 414
+ Y + LY+ N++ P N+ L++L L N LS S+P + N L TL
Sbjct: 88 AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146
Query: 415 DLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG-SI 473
+ +N+L F SL L L N+L+ + +L + + Y N LS +I
Sbjct: 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY---NLLSTLAI 203
Query: 474 PGEIGNLRSISN---------------LALNNNKLSGSIPQSLGNLSNLVILYLYNNSLF 518
P + L + N L L +N L+ + L N LV + L N L
Sbjct: 204 PIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELE 261
Query: 519 DSIPSELGNLRSLSMLSFAYNKLSG------SIPHSLGVLDLSSNHIVGEIPTELGKLNF 572
+ ++ L L + N+L IP +L VLDLS NH++ + + +
Sbjct: 262 KIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP-TLKVLDLSHNHLL-HVERNQPQFDR 319
Query: 573 LIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLS-NSIPKSFGNLVK 620
L L L N + ++ KL + L++L LS N NS+ F N+ +
Sbjct: 320 LENLYLDHNSI---VTLKLSTHHTLKNLTLSHNDWDCNSLRALFRNVAR 365
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 22/184 (11%)
Query: 161 IPPSL-GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNL 219
+PP + N+ L L L N LS F N L+ LS+ N + T+L
Sbjct: 108 LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 167
Query: 220 ATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSG-SIPHSLGNL-------------- 264
L L +N L +L + SL ++ YN LS +IP ++ L
Sbjct: 168 QNLQLSSNRL---THVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPV 224
Query: 265 -TNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNN 323
L L L N+L+ + + N L ++L YN+L I+ H + L LYI NN
Sbjct: 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 282
Query: 324 SLSG 327
L
Sbjct: 283 RLVA 286
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 105/270 (38%), Gaps = 34/270 (12%)
Query: 242 SLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKL 301
++ L +G+N + PH N+ L L L N LS F N L+ L++ N L
Sbjct: 94 TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNL 153
Query: 302 NGIIPHSLGNLTNLATLYIHNNSLSGS----IPSEIXXXXXXXXXXXXXXXXXXXIPPSL 357
I + T+L L + +N L+ IPS IP ++
Sbjct: 154 ERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPS------LFHANVSYNLLSTLAIPIAV 207
Query: 358 GYLS---------------NLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIP 402
L L L L N+L D+ + L N L + L YN+L +
Sbjct: 208 EELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMY 265
Query: 403 HSLGNLTNLATLDLYDNSLSGSIPSEFGN-LRSLSTLSLGYNKLSGSIPHSLGNLTNLDA 461
H + L L + +N L + +G + +L L L +N L + + L+
Sbjct: 266 HPFVKMQRLERLYISNNRLVAL--NLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLEN 322
Query: 462 LYLYDNSLSGSIPGEIGNLRSISNLALNNN 491
LYL NS+ + ++ ++ NL L++N
Sbjct: 323 LYLDHNSI---VTLKLSTHHTLKNLTLSHN 349
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 91/228 (39%), Gaps = 66/228 (28%)
Query: 516 SLFDSIPS-ELGNLRSLSM-----LSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGK 569
+L DS EL NL L + +FAY H++ L + N I P
Sbjct: 63 ALLDSFRQVELLNLNDLQIEEIDTYAFAY-------AHTIQKLYMGFNAIRYLPPHVFQN 115
Query: 570 LNFLIKLILAQNQLSG------QLSPKLGSLAQ------------------LEHLDLSSN 605
+ L L+L +N LS +PKL +L+ L++L LSSN
Sbjct: 116 VPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 175
Query: 606 RLSNS----IPKSFGNLVKLHYLNLSNNQFSR-GIPIKLEELIHLSELDLSHN---FLRE 657
RL++ IP F + N+S N S IPI +EEL D SHN +R
Sbjct: 176 RLTHVDLSLIPSLF-------HANVSYNLLSTLAIPIAVEEL------DASHNSINVVRG 222
Query: 658 AIPSQICIMQXXXXXXXXXXXXVGLIPSCFEKMHGLLRIDISYNELQG 705
+ ++ I++ + GL+ +D+SYNEL+
Sbjct: 223 PVNVELTILKLQHNNLTDTAWLLN--------YPGLVEVDLSYNELEK 262
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 79/204 (38%), Gaps = 23/204 (11%)
Query: 285 FGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXX 344
F ++ L +G+N + + PH N+ L L + N LS S+P I
Sbjct: 89 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147
Query: 345 XXXXXXXXIP-PSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSG-SIP 402
I + ++L L L SN L +L + SL ++ YN LS +IP
Sbjct: 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRL---THVDLSLIPSLFHANVSYNLLSTLAIP 204
Query: 403 HSLGNL---------------TNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSG 447
++ L L L L N+L+ + + N L + L YN+L
Sbjct: 205 IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEK 262
Query: 448 SIPHSLGNLTNLDALYLYDNSLSG 471
+ H + L+ LY+ +N L
Sbjct: 263 IMYHPFVKMQRLERLYISNNRLVA 286
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 165 LGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYL 224
L + ++ L+L D + + F ++ L +G+N PH N+ L L L
Sbjct: 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124
Query: 225 HNNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPS 283
N L S+P + N L+ LS+ N L + T+L L L N L+
Sbjct: 125 ERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH---V 180
Query: 284 EFGNLRSLSMLNLGYNKLNGI-IPHSLGNL 312
+ + SL N+ YN L+ + IP ++ L
Sbjct: 181 DLSLIPSLFHANVSYNLLSTLAIPIAVEEL 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 930 IVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV 986
+VHRD+ +N+LL + ++DFG+A ++ D W AGT GY++PE+
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 987 TEKCDVYSFGVLALEVIKGKHP 1008
+ D+++ GV+ ++ G P
Sbjct: 184 GKPVDIWACGVILYILLVGYPP 205
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 36/269 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN--IVKFY 880
IG GG V++ +I A+K + T + NE+ L +++ + I++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 122
Query: 881 GFCSHVRHSLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
+ ++ ++ N K + R + K + +A+ +H IVH
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 179
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVTEK-- 989
D+ N L+ D + DFGIA ++PD+++ + GT Y+ PE M + +
Sbjct: 180 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 238
Query: 990 ---------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCI 1040
DV+S G + + GK P I +N L ++DP
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPD 291
Query: 1041 VQDKLISIVEVAISCLDENPESRPTMPKV 1069
+ +K + +V CL +P+ R ++P++
Sbjct: 292 IPEK--DLQDVLKCCLKRDPKQRISIPEL 318
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 12/239 (5%)
Query: 400 SIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNL 459
++P + T L LDL +N +S +F L+ L L L NK+S + L L
Sbjct: 47 AVPKEISPDTTL--LDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKL 104
Query: 460 DALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFD 519
LY+ N L IP + + S+ L +++N++ L N+ + + N L +
Sbjct: 105 QKLYISKNHLV-EIPPNLPS--SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN 161
Query: 520 S--IPSELGNLRSLSMLSFAYNKLSG---SIPHSLGVLDLSSNHIVGEIPTELGKLNFLI 574
S P L+ L+ L + KL+G +P +L L L N I +L + + L
Sbjct: 162 SGFEPGAFDGLK-LNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLY 220
Query: 575 KLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSR 633
+L L NQ+ + L L L L L +N+LS +P +L L + L N ++
Sbjct: 221 RLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK 278
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 10/227 (4%)
Query: 174 LHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSI 233
L L +N +S+ +F L+ L L L NK S + L L LY+ N L + I
Sbjct: 59 LDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE-I 117
Query: 234 PSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSL--SGSIPSEFGNLRSL 291
P L + SL L + N++ L N+ + + N L SG P F L+ L
Sbjct: 118 PPNLPS--SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLK-L 174
Query: 292 SMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXX 351
+ L + KL G IP L N L++ +N + ++
Sbjct: 175 NYLRISEAKLTG-IPKDLPETLN--ELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231
Query: 352 XIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLS 398
SL +L L L+L +N L +P+ L +L+ L ++ L N ++
Sbjct: 232 IENGSLSFLPTLRELHLDNNKL-SRVPAGLPDLKLLQVVYLHTNNIT 277
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 35/216 (16%)
Query: 820 EHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIV 877
E +G+G V L + + AVK PG + + EV+ L + + HRN++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHI--RSRVFREVEMLYQCQGHRNVL 74
Query: 878 ----------KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+FY +R ILS+ + V++ ++ AL ++HN
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRG--GSILSHIHKRRHFNELEASVVVQDVASALDFLHNK-- 130
Query: 928 PPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSS----NWTEL---AGTYGYVA 977
I HRD+ +N+L + N+ + DFG+ +K + + EL G+ Y+A
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 978 PEL--AYTMKVT---EKCDVYSFGVLALEVIKGKHP 1008
PE+ A++ + + ++CD++S GV+ ++ G P
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex
With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 36/269 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN--IVKFY 880
IG GG V++ +I A+K + T + NE+ L +++ + I++ Y
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 74
Query: 881 GFCSHVRHSLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
+ ++ ++ N K + R + K + +A+ +H IVH
Sbjct: 75 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 131
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVTEK-- 989
D+ N L+ D + DFGIA ++PD+++ + GT Y+ PE M + +
Sbjct: 132 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 190
Query: 990 ---------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCI 1040
DV+S G + + GK P I +N L ++DP
Sbjct: 191 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPD 243
Query: 1041 VQDKLISIVEVAISCLDENPESRPTMPKV 1069
+ +K + +V CL +P+ R ++P++
Sbjct: 244 IPEK--DLQDVLKCCLKRDPKQRISIPEL 270
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK------FLKPDSSNWTELAGTYGYVAPELAYTM 984
+HRD++++NVL+ DN ++DFG+A+ + K ++ + ++APE +
Sbjct: 157 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDR 212
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 213 IYTHQSDVWSFGVLLWEI 230
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK------FLKPDSSNWTELAGTYGYVAPELAYTM 984
+HRD++++NVL+ DN ++DFG+A+ + K ++ + ++APE +
Sbjct: 165 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDR 220
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 221 IYTHQSDVWSFGVLLWEI 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK------FLKPDSSNWTELAGTYGYVAPELAYTM 984
+HRD++++NVL+ DN ++DFG+A+ + K ++ + ++APE +
Sbjct: 164 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDR 219
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 220 IYTHQSDVWSFGVLLWEI 237
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK------FLKPDSSNWTELAGTYGYVAPELAYTM 984
+HRD++++NVL+ DN ++DFG+A+ + K ++ + ++APE +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDR 227
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 228 IYTHQSDVWSFGVLLWEI 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK------FLKPDSSNWTELAGTYGYVAPELAYTM 984
+HRD++++NVL+ DN ++DFG+A+ + K ++ + ++APE +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDR 227
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 228 IYTHQSDVWSFGVLLWEI 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 61/280 (21%), Positives = 108/280 (38%), Gaps = 45/280 (16%)
Query: 823 IGKGGQGSVYKA---ELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G VY+ ++ GE VAVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 877 VKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISDA 918
V+ G S + +L ++ NN + + I+D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG--YV 976
++Y++ F VHRD++++N ++ D + DFG+ + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 977 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALD-EMLDPRL 1034
APE T D++SFGV+ E+ + P + L +D LD
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV----LKFVMDGGYLDQPD 255
Query: 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
P + ++ C NP RPT ++ LLK
Sbjct: 256 NCPE--------RVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK------FLKPDSSNWTELAGTYGYVAPELAYTM 984
+HRD++++NVL+ DN ++DFG+A+ + K ++ + ++APE +
Sbjct: 161 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDR 216
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 217 IYTHQSDVWSFGVLLWEI 234
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAK------FLKPDSSNWTELAGTYGYVAPELAYTM 984
+HRD++++NVL+ DN ++DFG+A+ + K ++ + ++APE +
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPEALFDR 227
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 228 IYTHQSDVWSFGVLLWEI 245
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 235 VYTHQSDVWSFGVLMWEI 252
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG+G G+V+KA+ + EIVA+K+ E L E+ L E++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHD 68
Query: 882 FCSHVRHSLAMILSN---------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVH 932
H L ++ ++ DL + + + L + H+ ++H
Sbjct: 69 VL-HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLH 124
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV-TEKCD 991
RD+ +N+L++ + E +++FG+A+ ++ T Y P++ + K+ + D
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 992 VYSFGVLALEVIKGKHP 1008
++S G + E+ P
Sbjct: 185 MWSAGCIFAELANAGRP 201
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 166 IHRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 221
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 222 VYTHQSDVWSFGVLMWEI 239
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN-LSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN+L+ +P L N L NL L L NSL+ +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N+L+ L L NL TL L ENSL +IP F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 191
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N+L + L L NL TL + NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 512 LYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLN 571
LY SL +P +L ++ G++P LG LDLS N + +P L
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-VLGTLDLSHNQL-QSLPLLGQTLP 100
Query: 572 FLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQF 631
L L ++ N+L+ L L +L+ L L N L P KL L+L+NNQ
Sbjct: 101 ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQL 160
Query: 632 SR 633
+
Sbjct: 161 TE 162
Score = 29.6 bits (65), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 57/141 (40%), Gaps = 5/141 (3%)
Query: 49 RVNSINLTSIGLKGMLHDFSFSSFPHLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNL 108
R+ +NL L + D + P L LDL HNQL ++P + L LD+S N
Sbjct: 56 RLTQLNLDRCELTKLQVD---GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNR 111
Query: 109 FFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNL 168
+ L L+ L L N+L P + +L L L
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGL 171
Query: 169 SNLDTLHLYDNSLSDSIPSEF 189
NLDTL L +NSL +IP F
Sbjct: 172 ENLDTLLLQENSLY-TIPKGF 191
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 36/269 (13%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN--IVKFY 880
IG GG V++ +I A+K + T + NE+ L +++ + I++ Y
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQHSDKIIRLY 94
Query: 881 GFCSHVRHSLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
+ ++ ++ N K + R + K + +A+ +H IVH
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHS 151
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVTEK-- 989
D+ N L+ D + DFGIA ++PD+++ + GT Y+ PE M + +
Sbjct: 152 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG 210
Query: 990 ---------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCI 1040
DV+S G + + GK P I +N L ++DP
Sbjct: 211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPD 263
Query: 1041 VQDKLISIVEVAISCLDENPESRPTMPKV 1069
+ +K + +V CL +P+ R ++P++
Sbjct: 264 IPEK--DLQDVLKCCLKRDPKQRISIPEL 290
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT------YGYVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 225 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 280
Query: 985 KVTEKCDVYSFGVLALEVI 1003
T + DV+SFGVL E+
Sbjct: 281 VYTHQSDVWSFGVLMWEIF 299
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 61/280 (21%), Positives = 110/280 (39%), Gaps = 45/280 (16%)
Query: 823 IGKGGQGSVYKA---ELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G VY+ ++ GE VAVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 877 VKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISDA 918
V+ G S + +L ++ NN + + I+D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG--YV 976
++Y++ F VHRD++++N ++ D + DFG+ + + + G ++
Sbjct: 143 MAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 977 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALD-EMLDPRL 1034
APE T D++SFGV+ E+ + P + L +D LD
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV----LKFVMDGGYLDQPD 255
Query: 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
P + ++ C NP+ RPT ++ LLK
Sbjct: 256 NCPE--------RVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882
IGKG G VY GE VA++ E + F EV A + RH N+V F G
Sbjct: 41 IGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKA-FKREVMAYRQTRHENVVLFMGA 97
Query: 883 CSHVRH-----------SLAMILSNNAAAKDLGWTRRM--NVIKGISDALSYMHNDCFPP 929
C H +L ++ + D+ TR++ ++KG + Y+H
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG----MGYLHAK---G 150
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGI 955
I+H+D+ SKNV D + + ++DFG+
Sbjct: 151 ILHKDLKSKNVFYD-NGKVVITDFGL 175
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 171 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 226
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 227 VYTHQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 168 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 223
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 224 VYTHQSDVWSFGVLMWEI 241
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 235 VYTHQSDVWSFGVLMWEI 252
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 235 VYTHQSDVWSFGVLMWEI 252
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 235 VYTHQSDVWSFGVLMWEI 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 235 VYTHQSDVWSFGVLMWEI 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG------YVAPELAYTM 984
+HRD++++NVL+ +N ++DFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 985 KVTEKCDVYSFGVLALEV 1002
T + DV+SFGVL E+
Sbjct: 235 VYTHQSDVWSFGVLMWEI 252
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN+L+ L L NL L L NSL+ +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N+L+ L L NL TL L ENSL +IP F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 191
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N+L + L L NL TL + NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 512 LYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLN 571
LY SL +P +L ++ G++P LG LDLS N + +P L
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-VLGTLDLSHNQL-QSLPLLGQTLP 100
Query: 572 FLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQF 631
L L ++ N+L+ L L +L+ L L N L P KL L+L+NNQ
Sbjct: 101 ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQL 160
Query: 632 SR 633
+
Sbjct: 161 TE 162
Score = 29.6 bits (65), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 57/141 (40%), Gaps = 5/141 (3%)
Query: 49 RVNSINLTSIGLKGMLHDFSFSSFPHLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNL 108
R+ +NL L + D + P L LDL HNQL ++P + L LD+S N
Sbjct: 56 RLTQLNLDRCELTKLQVD---GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNR 111
Query: 109 FFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNL 168
+ L L+ L L N+L P + +L L L
Sbjct: 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGL 171
Query: 169 SNLDTLHLYDNSLSDSIPSEF 189
NLDTL L +NSL +IP F
Sbjct: 172 ENLDTLLLQENSLY-TIPKGF 191
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA------HVSDFGIAKFLKPDSS 964
V+ I+ + Y+H +VHRD+ N+L + +E+ + DFG AK L+ ++
Sbjct: 121 VLFTITKTVEYLHAQ---GVVHRDLKPSNIL--YVDESGNPESIRICDFGFAKQLRAENG 175
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
T +VAPE+ CD++S GVL ++ G P
Sbjct: 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRRM--NVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 161 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 217
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 218 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH 873
+ FD +G G G V + SG A+K ++ + LNE + L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 874 RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIK---------GISDALSYMHN 924
+VK F +L M++ A + RR+ I Y+H+
Sbjct: 101 PFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 925 DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM 984
+++RD+ +N+L+D V+DFG AK +K W L GT +APE+ +
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEALAPEIILSK 213
Query: 985 KVTEKCDVYSFGVLALEVIKGKHP 1008
+ D ++ GVL E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 20/237 (8%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A + VA+KK P + T + E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLN 128
Query: 882 FCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ + L M L + +L R ++ + + ++H+ I
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 185
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 186 IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 991 DVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 902 DLGWTRRM--NVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R ++K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 155 DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 212 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 89
Query: 880 YGFCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ + L M L + +L R ++ + + ++H+
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 146
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 206 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNN 227
L+NL L L DN ++D P NL ++ L L N ++ L ++ TL L +
Sbjct: 68 LNNLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTST 123
Query: 228 SLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287
+ D P L L +L +L L N+++ P L LTNL L + N ++ P N
Sbjct: 124 QITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTP--LAN 177
Query: 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIP 330
L L+ L NK++ I P L +L NL +++ +N +S P
Sbjct: 178 LSKLTTLRADDNKISDISP--LASLPNLIEVHLKDNQISDVSP 218
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 164 SLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLY 223
++ L ++ TL L ++D P L +L +L L N+ + P L LTNL L
Sbjct: 108 AIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLS 163
Query: 224 LHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPS 283
+ NN + D P L NL L+ L NK+S P L +L NL ++L +N +S P
Sbjct: 164 IGNNQVNDLTP--LANLSKLTTLRADDNKISDISP--LASLPNLIEVHLKDNQISDVSP- 218
Query: 284 EFGNLRSLSMLNL 296
NL +L ++ L
Sbjct: 219 -LANLSNLFIVTL 230
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 43/225 (19%)
Query: 235 SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSML 294
++L + +LS + G + G + L NL L L +N ++ P NL ++ L
Sbjct: 44 ADLDGIATLSAFNTGVTTIEG-----IQYLNNLIGLELKDNQITDLTP--LKNLTKITEL 96
Query: 295 NLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXIP 354
L N L + ++ L ++ TL + + ++ P
Sbjct: 97 ELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVTP------------------------ 130
Query: 355 PSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATL 414
L LSNL LYL N + + P L L +L LS+G N+++ P L NL+ L TL
Sbjct: 131 --LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTP--LANLSKLTTL 184
Query: 415 DLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNL 459
DN +S P +L +L + L N++S P L NL+NL
Sbjct: 185 RADDNKISDISP--LASLPNLIEVHLKDNQISDVSP--LANLSNL 225
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 432 LRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNN 491
L +L L L N+++ P L NLT + L L N L I L+SI L L +
Sbjct: 68 LNNLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTST 123
Query: 492 KLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIP----H 547
+++ P L LSNL +LYL N + + P L L +L LS N+++ P
Sbjct: 124 QITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTPLANLS 179
Query: 548 SLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHL 600
L L N I P L L LI++ L NQ+S +SP LA L +L
Sbjct: 180 KLTTLRADDNKISDISP--LASLPNLIEVHLKDNQIS-DVSP----LANLSNL 225
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 93 IGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRXXXXXXXXX 152
I + +K LDL+S P + LS L+ L L NQ+ P +
Sbjct: 109 IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 164
Query: 153 XXXXXEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHS 212
DL P L NLS L TL DN +SD P +L +L + L N+ S P
Sbjct: 165 GNNQVNDLTP--LANLSKLTTLRADDNKISDISP--LASLPNLIEVHLKDNQISDVSP-- 218
Query: 213 LGNLTNL 219
L NL+NL
Sbjct: 219 LANLSNL 225
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 36/161 (22%)
Query: 504 LSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIP----HSLGVLDLSSNHI 559
L+NL+ L L +N + D P L NL ++ L + N L S+ LDL+S I
Sbjct: 68 LNNLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQI 125
Query: 560 VGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLV 619
P L L+ L+ L L N+++N P L
Sbjct: 126 TDVTP--------------------------LAGLSNLQVLYLDLNQITNISP--LAGLT 157
Query: 620 KLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660
L YL++ NNQ + P L L L+ L N + + P
Sbjct: 158 NLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISP 196
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole
Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 87
Query: 880 YGFCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ + L M L + +L R ++ + + ++H+
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 144
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 145 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 203
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 204 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 262
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN-LSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN+L+ +P L N L NL L L NSL+ +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N+L+ L L NL TL L ENSL +IP F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 191
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N+L + L L NL TL + NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 512 LYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLN 571
LY SL +P +L ++ G++P LG LDLS N + +P L
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-VLGTLDLSHNQL-QSLPLLGQTLP 100
Query: 572 FLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQF 631
L L ++ N+L+ L L +L+ L L N L P KL L+L+NNQ
Sbjct: 101 ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQL 160
Query: 632 SR 633
+
Sbjct: 161 TE 162
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 89
Query: 880 YGFCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ + L M L + +L R ++ + + ++H+
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 146
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 206 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 912 IKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTE 968
I I ++++++H IVHRD+ +N+LL + ++DFG+A ++ + W
Sbjct: 136 IHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
AGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN-LSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN+L+ +P L N L NL L L NSL+ +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N+L+ L L NL TL L ENSL +IP F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 191
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N+L + L L NL TL + NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 512 LYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLN 571
LY SL +P +L ++ G++P LG LDLS N + +P L
Sbjct: 43 LYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLP-VLGTLDLSHNQL-QSLPLLGQTLP 100
Query: 572 FLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQF 631
L L ++ N+L+ L L +L+ L L N L P KL L+L+NNQ
Sbjct: 101 ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQL 160
Query: 632 SR 633
+
Sbjct: 161 TE 162
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp
Length = 423
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 126
Query: 880 YGFCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ + L M L + +L R ++ + + ++H+
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 183
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 243 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A 1-Aryl-3,4-
Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
Length = 364
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 88
Query: 880 YGFCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ + L M L + +L R ++ + + ++H+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 145
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYG---YVAPELAYTMKVTE 988
HRD+ +N+L+ D+ A++ DFGIA T+L T G Y APE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 989 KCDVYSFGVLALEVIKGKHP 1008
+ D+Y+ + E + G P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR 872
++++D + +GKG V + +G A K ++ FQ+ E + +++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 86
Query: 873 HRNIVKFYGFCSHVR-HSLAM-------ILSNNAAAKDLGWTRRMNVIKGISDALSYMHN 924
H NIV+ + H L + + A + + I+ I ++++Y H+
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 925 DCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
+ IVHR++ +N+LL + ++DFG+A + DS W AGT GY++PE+
Sbjct: 147 N---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVL 202
Query: 982 YTMKVTEKCDVYSFGVL 998
++ D+++ GV+
Sbjct: 203 KKDPYSKPVDIWACGVI 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 24/239 (10%)
Query: 823 IGKGGQGSV---YKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKF 879
IG G QG V Y A L VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISL 88
Query: 880 YGFCSHVRH-------SLAMILSN----NAAAKDLGWTRRMNVIKGISDALSYMHNDCFP 928
+ + L M L + +L R ++ + + ++H+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---A 145
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTE 988
I+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 989 KCDVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E+++ K P RD+I L E + PT V+++
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 92
Query: 882 FCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ V + ++ +N +L R ++ + + ++H+ I
Sbjct: 93 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 149
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T Y APE+ M E
Sbjct: 150 IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMVPFVVTRYYRAPEVILGMGYKENV 208
Query: 991 DVYSFGVLALEVIKG 1005
D++S G + E+IKG
Sbjct: 209 DIWSVGCIMGEMIKG 223
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain
Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain
Phosphorylated On Ser172
Length = 319
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 40/216 (18%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEF---LNEVKALTEIRHRNIVK 878
+G+G +V++ +G++ A+K F++ ++F + + E + L ++ H+NIVK
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNN-----ISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 879 FYGFCSH--VRH-----------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHND 925
+ RH SL +L + A L + + V++ + ++++ +
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 926 CFPPIVHRDISSKNVLL----DFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA 981
IVHR+I N++ D + ++DFG A+ L+ D + L GT Y+ P++
Sbjct: 132 ---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDM- 186
Query: 982 YTMKVTEK---------CDVYSFGVLALEVIKGKHP 1008
Y V K D++S GV G P
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
ND + IG+G G V KA + + A+K+ + ++F E++ L ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 72
Query: 872 -RHRNIVKFYGFCSH-------------------VRHSLAM-----ILSNNAAAKDLGWT 906
H NI+ G C H +R S + N+ A L
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ ++ + Y+ F +HRD++++N+L+ + A ++DFG+++
Sbjct: 133 QLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------GQE 183
Query: 967 TELAGTYG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVI 1003
+ T G ++A E L Y++ T DV+S+GVL E++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 225
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
ND + IG+G G V KA + + A+K+ + ++F E++ L ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 82
Query: 872 -RHRNIVKFYGFCSH-------------------VRHSLAM-----ILSNNAAAKDLGWT 906
H NI+ G C H +R S + N+ A L
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ ++ + Y+ F +HRD++++N+L+ + A ++DFG+++
Sbjct: 143 QLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR------GQE 193
Query: 967 TELAGTYG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVI 1003
+ T G ++A E L Y++ T DV+S+GVL E++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 235
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA------HVSDFGIAKFLKPDSS 964
V+ I+ + Y+H +VHRD+ N+L + +E+ + DFG AK L+ ++
Sbjct: 121 VLFTITKTVEYLHAQ---GVVHRDLKPSNIL--YVDESGNPESIRICDFGFAKQLRAENG 175
Query: 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
T +VAPE+ CD++S GVL + G P
Sbjct: 176 LLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 95/247 (38%), Gaps = 58/247 (23%)
Query: 797 SVLTFEGKIVYEEIIRATND-FDDEHCIGKGGQGSVY-KAELASGEIVAVKKFHSPLPGE 854
S+++ +E R D F E G+G G+V E ++G VA+KK + +
Sbjct: 4 SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKK----VIQD 59
Query: 855 MTFQQEFLNEVKALTEIRHRNIVK----FYGFCSHVRHSLAMILSNNAAAKDLGWTRRMN 910
F+ L ++ L + H NIV+ FY R + + +
Sbjct: 60 PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV---------------- 103
Query: 911 VIKGISDAL-----SYMHNDCFPP------------------------IVHRDISSKNVL 941
V++ + D L +Y PP + HRDI NVL
Sbjct: 104 VMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL 163
Query: 942 L-DFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLA 999
+ + D + DFG AK L P N + Y Y APEL + T D++S G +
Sbjct: 164 VNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-YRAPELIFGNQHYTTAVDIWSVGCIF 222
Query: 1000 LEVIKGK 1006
E++ G+
Sbjct: 223 AEMMLGE 229
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA-GTYGYVAPELAYTMKVTE- 988
VHRDI N+LLD ++DFG L+ D + + +A GT Y++PE+ +
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPG 243
Query: 989 ------KCDVYSFGVLALEVIKGKHP 1008
+CD ++ GV A E+ G+ P
Sbjct: 244 TGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 429 FGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLAL 488
F ++ L +G+N + PH N+ L L L N LS G N ++ L++
Sbjct: 95 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154
Query: 489 NNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSG-SIPH 547
+NN L + ++L L L +N L +L + SL + +YN LS +IP
Sbjct: 155 SNNNLERIEDDTFQATTSLQNLQLSSNRL---THVDLSLIPSLFHANVSYNLLSTLAIPI 211
Query: 548 SLGVLDLSSNHI---VGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSS 604
++ LD S N I G + EL L L N L+ + L + L +DLS
Sbjct: 212 AVEELDASHNSINVVRGPVNVELTILK------LQHNNLTD--TAWLLNYPGLVEVDLSY 263
Query: 605 NRLSNSIPKSFGNLVKLHYLNLSNNQFSR----GIPIKLEELIHLSELDLSHNFL 655
N L + F + +L L +SNN+ G PI L LDLSHN L
Sbjct: 264 NELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPT-----LKVLDLSHNHL 313
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 35/289 (12%)
Query: 356 SLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATL 414
+ Y + LY+ N++ P N+ L++L L N LS S+P + N L TL
Sbjct: 94 AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 152
Query: 415 DLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSG-SI 473
+ +N+L F SL L L N+L+ + +L + + Y N LS +I
Sbjct: 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY---NLLSTLAI 209
Query: 474 PGEIGNLRSISN---------------LALNNNKLSGSIPQSLGNLSNLVILYLYNNSLF 518
P + L + N L L +N L+ + L N LV + L N L
Sbjct: 210 PIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTA--WLLNYPGLVEVDLSYNELE 267
Query: 519 DSIPSELGNLRSLSMLSFAYNKLSG------SIPHSLGVLDLSSNHIVGEIPTELGKLNF 572
+ ++ L L + N+L IP +L VLDLS NH++ + + +
Sbjct: 268 KIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP-TLKVLDLSHNHLL-HVERNQPQFDR 325
Query: 573 LIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLS-NSIPKSFGNLVK 620
L L L N + ++ KL + L++L LS N NS+ F N+ +
Sbjct: 326 LENLYLDHNSI---VTLKLSTHHTLKNLTLSHNDWDCNSLRALFRNVAR 371
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 75/182 (41%), Gaps = 22/182 (12%)
Query: 161 IPPSL-GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNL 219
+PP + N+ L L L N LS F N L+ LS+ N + T+L
Sbjct: 114 LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 173
Query: 220 ATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSG-SIPHSLGNL-------------- 264
L L +N L +L + SL ++ YN LS +IP ++ L
Sbjct: 174 QNLQLSSNRL---THVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPV 230
Query: 265 -TNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNN 323
L L L N+L+ + + N L ++L YN+L I+ H + L LYI NN
Sbjct: 231 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 288
Query: 324 SL 325
L
Sbjct: 289 RL 290
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 242 SLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKL 301
++ L +G+N + PH N+ L L L N LS F N L+ L++ N L
Sbjct: 100 TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNL 159
Query: 302 NGIIPHSLGNLTNLATLYIHNNSLS 326
I + T+L L + +N L+
Sbjct: 160 ERIEDDTFQATTSLQNLQLSSNRLT 184
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 23/202 (11%)
Query: 285 FGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXX 344
F ++ L +G+N + + PH N+ L L + N LS S+P I
Sbjct: 95 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 153
Query: 345 XXXXXXXXIP-PSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSG-SIP 402
I + ++L L L SN L +L + SL ++ YN LS +IP
Sbjct: 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRL---THVDLSLIPSLFHANVSYNLLSTLAIP 210
Query: 403 HSLGNL---------------TNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSG 447
++ L L L L N+L+ + + N L + L YN+L
Sbjct: 211 IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEK 268
Query: 448 SIPHSLGNLTNLDALYLYDNSL 469
+ H + L+ LY+ +N L
Sbjct: 269 IMYHPFVKMQRLERLYISNNRL 290
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 14/154 (9%)
Query: 165 LGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYL 224
L + ++ L+L D + + F ++ L +G+N PH N+ L L L
Sbjct: 71 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130
Query: 225 HNNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGS--- 280
N L S+P + N L+ LS+ N L + T+L L L N L+
Sbjct: 131 ERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLS 189
Query: 281 -IPSEFGNLRSLSMLNLGYNKLNGI-IPHSLGNL 312
IPS F N+ YN L+ + IP ++ L
Sbjct: 190 LIPSLFH-------ANVSYNLLSTLAIPIAVEEL 216
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 92/227 (40%), Gaps = 66/227 (29%)
Query: 516 SLFDSIPS-ELGNLRSLSM-----LSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGK 569
+L DS EL NL L + +FAY H++ L + N I P
Sbjct: 69 ALLDSFRQVELLNLNDLQIEEIDTYAFAY-------AHTIQKLYMGFNAIRYLPPHVFQN 121
Query: 570 LNFLIKLILAQNQLSG------QLSPKLGSLAQ------------------LEHLDLSSN 605
+ L L+L +N LS +PKL +L+ L++L LSSN
Sbjct: 122 VPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 181
Query: 606 RLSNS----IPKSFGNLVKLHYLNLSNNQFSR-GIPIKLEELIHLSELDLSHN---FLRE 657
RL++ IP F + N+S N S IPI +EEL D SHN +R
Sbjct: 182 RLTHVDLSLIPSLF-------HANVSYNLLSTLAIPIAVEEL------DASHNSINVVRG 228
Query: 658 AIPSQICIMQXXXXXXXXXXXXVGLIPSCFEKMHGLLRIDISYNELQ 704
+ ++ I++ + P GL+ +D+SYNEL+
Sbjct: 229 PVNVELTILKLQHNNLTDTAWLLN-YP-------GLVEVDLSYNELE 267
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 94 GNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRXXXXXXXXXX 153
IS +LD S+NL T+ GHL+ L+TL L NQL E+ +
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-----ELSK---------- 365
Query: 154 XXXXEDLIPPSLGNLSNLDTLHLYDNSLS-DSIPSEFGNLRSLSMLSLGYNKFSGSIPHS 212
I + +L L + NS+S D + +SL L++ N + +I
Sbjct: 366 -------IAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC 418
Query: 213 LGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL-GNLTNLATLY 271
L + L LH+N + SIP ++ L +L L++ N+L S+P + LT+L ++
Sbjct: 419 LP--PRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTSLQKIW 474
Query: 272 LYENSLSGSIP 282
L+ N S P
Sbjct: 475 LHTNPWDCSCP 485
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 174 LHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFS--GSIPHSLGNLTNLATLYLHNNSL-F 230
L +N L+D++ G+L L L L N+ I + +L L + NS+ +
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 231 DSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRS 290
D + +SL L++ N L+ +I L + L L+ N + SIP + L +
Sbjct: 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKI-KSIPKQVVKLEA 445
Query: 291 LSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIP 330
L LN+ N+L + LT+L +++H N S P
Sbjct: 446 LQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLS--GSIPQSLGNLSNLVILYLYNNSL-FDSIP 522
+N L+ ++ G+L + L L N+L I + + +L L + NS+ +D
Sbjct: 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK 392
Query: 523 SELGNLRSLSMLSFAYNKLSGSI----PHSLGVLDLSSNHIVGEIPTELGKLNFLIKLIL 578
+ +SL L+ + N L+ +I P + VLDL SN I IP ++ KL L +L +
Sbjct: 393 GDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKI-KSIPKQVVKLEALQELNV 451
Query: 579 AQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPK 613
A NQL L L+ + L +N S P+
Sbjct: 452 ASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 28/183 (15%)
Query: 294 LNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIXXXXXXXXXXXXXXXXXXXI 353
L+ N L + + G+LT L TL + N L I
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKE----------------------LSKI 366
Query: 354 PPSLGYLSNLATLYLYSNSL-FDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLA 412
+ +L L + NS+ +D + +SL L++ N L+ +I L +
Sbjct: 367 AEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIK 424
Query: 413 TLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSL-GNLTNLDALYLYDNSLSG 471
LDL+ N + SIP + L +L L++ N+L S+P + LT+L ++L+ N
Sbjct: 425 VLDLHSNKI-KSIPKQVVKLEALQELNVASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDC 482
Query: 472 SIP 474
S P
Sbjct: 483 SCP 485
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 485 NLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGS 544
+L +NN L+ ++ ++ G+L+ L L L ++ L+ LS ++ ++
Sbjct: 328 HLDFSNNLLTDTVFENCGHLTELETLIL-----------QMNQLKELSKIAEMTTQMK-- 374
Query: 545 IPHSLGVLDLSSNHI-VGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLS 603
SL LD+S N + E + L+ L ++ N L+ + L +++ LDL
Sbjct: 375 ---SLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLH 429
Query: 604 SNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIP 636
SN++ SIPK L L LN+++NQ + +P
Sbjct: 430 SNKIK-SIPKQVVKLEALQELNVASNQL-KSVP 460
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 38/312 (12%)
Query: 362 NLATLYLYSNSLFDSIP--SELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDN 419
NL L L N+ FD++P E GN+ L L L L S + +L N++ + L
Sbjct: 91 NLKHLDLSFNA-FDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHL-NISKVLLVLG 148
Query: 420 SLSGSIPSEFG----NLRSLSTLSLGYNKLSGSIPHSLGNLTNLD----ALYLYDNSLSG 471
G G N SL + + + S+ + NL+ L DN S
Sbjct: 149 ETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSY 208
Query: 472 --SIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLR 529
SI ++ +SNL LNN I + + ++ L + + SI N++
Sbjct: 209 FLSILAKLQTNPKLSNLTLNN------IETTWNSFIRILQLVWHTTVWYFSI----SNVK 258
Query: 530 SLSMLSFAYNKLSGSIPHSLGVLDLSSN------HIVGEIPTELGKLNFLIKLILAQNQL 583
L F SG+ +L + + S+ + EI + + NF + + ++
Sbjct: 259 LQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTV----SGTRM 314
Query: 584 SGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSR--GIPIKLEE 641
L P ++ HLD S+N L++++ ++ G+L +L L L NQ I +
Sbjct: 315 VHMLCP--SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ 372
Query: 642 LIHLSELDLSHN 653
+ L +LD+S N
Sbjct: 373 MKSLQQLDISQN 384
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 817 FDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH-- 873
+D +G G G V++ E A+G A K +P + ++ E++ ++ +RH
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPT 215
Query: 874 -----------RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYM 922
+V Y F S + +N ++D V KG L +M
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG----LCHM 271
Query: 923 HNDCFPPIVHRDISSKNVLL--DFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 980
H + + VH D+ +N++ NE + DFG+ L P S GT + APE+
Sbjct: 272 HENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-TTGTAEFAAPEV 327
Query: 981 AYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
A V D++S GVL+ ++ G P
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 40/271 (14%)
Query: 823 IGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN--IVKFY 880
IG GG V++ +I A+K + T + NE+ L +++ + I++ Y
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD-SYRNEIAYLNKLQQHSDKIIRLY 122
Query: 881 GFCSHVRHSLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHR 933
+ ++ ++ N K + R + K + +A+ +H IVH
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHS 179
Query: 934 DISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE--LAGTYGYVAPELAYTMKVTEK-- 989
D+ N L+ D + DFGIA ++PD+++ + G Y+ PE M + +
Sbjct: 180 DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENG 238
Query: 990 ---------CDVYSFGVLALEVIKGKHPRDFIXXXXXXXLNLNIALDEMLDP--RLPTPS 1038
DV+S G + + GK P I +N L ++DP + P
Sbjct: 239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAIIDPNHEIEFPD 291
Query: 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKV 1069
+D + +V CL +P+ R ++P++
Sbjct: 292 IPEKD----LQDVLKCCLKRDPKQRISIPEL 318
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 44/218 (20%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHS-----PLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G +V++ +G++ A+K F++ P+ +M E + L ++ H+NI
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM-------REFEVLKKLNHKNI 69
Query: 877 VKFYGFCSH--VRH-----------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMH 923
VK + RH SL +L + A L + + V++ + ++++
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 924 NDCFPPIVHRDISSKNVLL----DFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979
+ IVHR+I N++ D + ++DFG A+ L+ D + L GT Y+ P+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPD 185
Query: 980 LAYTMKVTEK---------CDVYSFGVLALEVIKGKHP 1008
+ Y V K D++S GV G P
Sbjct: 186 M-YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 927 FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT---YGYVAPELAYT 983
F VHRD++++NVL+ + DFG+A+ + D SN+ ++APE +
Sbjct: 190 FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD-SNYVVRGNARLPVKWMAPESLFE 248
Query: 984 MKVTEKCDVYSFGVLALEV 1002
T K DV+S+G+L E+
Sbjct: 249 GIYTIKSDVWSYGILLWEI 267
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%)
Query: 405 LGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYL 464
G L +L L+L N L+G P+ F + L LG NK+ L L L L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 465 YDNSLSGSIPGEIGNLRSISNLALNNN 491
YDN +S +PG +L S+++L L +N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 567 LGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNL 626
G+L L+KL L +NQL+G + ++ L L N++ K F L +L LNL
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 627 SNNQFSRGIPIKLEELIHLSELDLSHN 653
+NQ S +P E L L+ L+L+ N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%)
Query: 357 LGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDL 416
G L +L L L N L P+ + L LG NK+ L L TL+L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 417 YDNSLSGSIPSEFGNLRSLSTLSLGYN 443
YDN +S +P F +L SL++L+L N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%)
Query: 213 LGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYL 272
G L +L L L N L P+ + L LG NK+ L L TL L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 273 YENSLSGSIPSEFGNLRSLSMLNLGYNKLN 302
Y+N +S +P F +L SL+ LNL N N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 541 LSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHL 600
L G +PH L L+L N + G P + + +L L +N++ + L QL+ L
Sbjct: 49 LFGRLPH-LVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTL 107
Query: 601 DLSSNRLSNSIPKSFGNLVKLHYLNLSNNQF 631
+L N++S +P SF +L L LNL++N F
Sbjct: 108 NLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 65/156 (41%), Gaps = 31/156 (19%)
Query: 52 SINLTSIGLKGMLHDFSFSSFPHLAYLDLWHNQLYGNIPPQ--IGNISRLKYLDLSSNLF 109
+++ T GLK + D H L L N+L G I G + L L+L N
Sbjct: 12 TVDCTGRGLKEIPRDIPL----HTTELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQL 66
Query: 110 FGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRXXXXXXXXXXXXXXEDLIPPSLGNLS 169
G P S+++ LQL EN++ EI LG L
Sbjct: 67 TGIEPNAFEGASHIQELQLGENKIK-----EISNKMF------------------LG-LH 102
Query: 170 NLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKF 205
L TL+LYDN +S +P F +L SL+ L+L N F
Sbjct: 103 QLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 37.0 bits (84), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 237 LGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNL 296
G L L L L N+L+G P++ +++ L L EN + F L L LNL
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 297 GYNKLNGIIPHSLGNLTNLATLYIHNN 323
N+++ ++P S +L +L +L + +N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Query: 416 LYDNSLSGSIPSE--FGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSI 473
L DN L G I S+ FG L L L L N+L+G P++ +++ L L +N +
Sbjct: 36 LNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK--- 91
Query: 474 PGEIGN-----LRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNN 515
EI N L + L L +N++S +P S +L++L L L +N
Sbjct: 92 --EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 261 LGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYI 320
G L +L L L N L+G P+ F + L LG NK+ I L L TL +
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 321 HNNSLSGSIP 330
++N +S +P
Sbjct: 110 YDNQISCVMP 119
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%)
Query: 453 LGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYL 512
G L +L L L N L+G P I L L NK+ + L L L L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 513 YNNSLFDSIPSELGNLRSLSMLSFAYN 539
Y+N + +P +L SL+ L+ A N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 27/128 (21%)
Query: 270 LYLYENSLSGSIPSE--FGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSG 327
L L +N L G I S+ FG L L L L N+L GI P++ +++ L + N +
Sbjct: 34 LLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI-- 90
Query: 328 SIPSEIXXXXXXXXXXXXXXXXXXXIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSL 387
EI LG L L TL LY N + +P +L SL
Sbjct: 91 ---KEISNKMF------------------LG-LHQLKTLNLYDNQISCVMPGSFEHLNSL 128
Query: 388 SMLSLGYN 395
+ L+L N
Sbjct: 129 TSLNLASN 136
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein
Kinase And Immunoglobulin Domains
Length = 491
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 817 FDDEHCIGKGGQGSVYK-AELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH-- 873
+D +G G G V++ E A+G A K +P + ++ E++ ++ +RH
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD---KETVRKEIQTMSVLRHPT 109
Query: 874 -----------RNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYM 922
+V Y F S + +N ++D V KG L +M
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG----LCHM 165
Query: 923 HNDCFPPIVHRDISSKNVLL--DFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 980
H + + VH D+ +N++ NE + DFG+ L P S GT + APE+
Sbjct: 166 HENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-TTGTAEFAAPEV 221
Query: 981 AYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
A V D++S GVL+ ++ G P
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 911 VIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970
+IK + ++ SY+HN+ I HRD+ N+L+D + +SDFG ++++ +
Sbjct: 156 IIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR-- 211
Query: 971 GTYGYVAPEL-----AYTMKVTEKCDVYSFGV 997
GTY ++ PE +Y K D++S G+
Sbjct: 212 GTYEFMPPEFFSNESSYN---GAKVDIWSLGI 240
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGTYG 974
A+ Y+H + I+HRD+ +NVLL E ++DFG +K L ++S L GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 181
Query: 975 YVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y+APE+ T D +S GV+ + G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGTYG 974
A+ Y+H + I+HRD+ +NVLL E ++DFG +K L ++S L GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 181
Query: 975 YVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y+APE+ T D +S GV+ + G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex
With Inhibitor Pv1533
Length = 322
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGTYG 974
A+ Y+H + I+HRD+ +NVLL E ++DFG +K L ++S L GT
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 180
Query: 975 YVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y+APE+ T D +S GV+ + G P
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And Potentiation
Of Cytotoxic Drugs By Novel Chk2 Inhibitor Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGTYG 974
A+ Y+H + I+HRD+ +NVLL E ++DFG +K L ++S L GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 181
Query: 975 YVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y+APE+ T D +S GV+ + G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound To
The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 918 ALSYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGTYG 974
A+ Y+H + I+HRD+ +NVLL E ++DFG +K L ++S L GT
Sbjct: 132 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 187
Query: 975 YVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHP 1008
Y+APE+ T D +S GV+ + G P
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 823 IGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY- 880
+G G G V+K E A+G +A K + M ++E NE+ + ++ H N+++ Y
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 881 GFCSHVRHSLAMILSNNAAAKDLGWTRRMNV--------IKGISDALSYMHNDCFPPIVH 932
F S L M + D N+ +K I + + +MH I+H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILH 210
Query: 933 RDISSKNVL-LDFD-NEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
D+ +N+L ++ D + + DFG+A+ KP GT ++APE+ V+
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVSFPT 269
Query: 991 DVYSFGVLALEVIKGKHP 1008
D++S GV+A ++ G P
Sbjct: 270 DMWSVGVIAYMLLSGLSP 287
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 109/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E ++++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKLNHQ 108
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 281
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 282 PKNCPGP----------VYRIMTQCWQHQPEDRP 305
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 208
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 266
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 267 PKNCPGP----------VYRIMTQCWQHQPEDRP 290
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN-LSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN L+ +P L N L NL L L NSL+ +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNDLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N L+ L L NL TL L ENSL +IP F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 191
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N L + L L NL TL + NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN-LSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN L+ +P L N L NL L L NSL+ +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N L+ L L NL TL L ENSL +IP F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 191
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N L + L L NL TL + NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMK--- 985
IVHRD+ +N+LLD D ++DFG + L P + GT Y+APE + +M
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSVCGTPSYLAPEIIECSMNDNH 203
Query: 986 --VTEKCDVYSFGVLALEVIKGKHP 1008
++ D++S GV+ ++ G P
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN-LSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN L+ +P L N L NL L L NSL+ +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N L+ L L NL TL L ENSL +IP F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 191
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N L + L L NL TL + NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 109/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E ++++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKLNHQ 94
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 209
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 267
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 268 PKNCPGP----------VYRIMTQCWQHQPEDRP 291
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 20/237 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 84
Query: 882 FCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ V + ++ +N +L R ++ + + ++H+ I
Sbjct: 85 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 141
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 991 DVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E++ K P RD+I L E + PT V+++
Sbjct: 201 DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 257
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 20/237 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 95
Query: 882 FCS---------HVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ V + ++ +N +L R ++ + + ++H+ I
Sbjct: 96 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 152
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ S T T Y APE+ M E
Sbjct: 153 IHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 211
Query: 991 DVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E++ K P RD+I L E + PT V+++
Sbjct: 212 DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 268
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 823 IGKGGQGSVYKAELAS--GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY 880
+G+G G VY+ + GE + V + +++F++E + + H +IVK
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 881 GFCSHVRHSLAMILSNNAAAKDLG--WTRRMNVIK---------GISDALSYMHN-DCFP 928
G + I+ +LG R N +K I A++Y+ + +C
Sbjct: 92 GI---IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC-- 146
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD---SSNWTELAGTYGYVAPELAYTMK 985
VHRDI+ +N+L+ + DFG++++++ + ++ T L +++PE +
Sbjct: 147 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRR 202
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
T DV+ F V E++ GK P F + + D + P L P
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQP--FFWLENKDVIGVLEKGDRLPKPDLCPP------- 253
Query: 1045 LISIVEVAISCLDENPESRP 1064
+ + C D +P RP
Sbjct: 254 --VLYTLMTRCWDYDPSDRP 271
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 823 IGKGGQGSVYKAELAS--GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY 880
+G+G G VY+ + GE + V + +++F++E + + H +IVK
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 881 GFCSHVRHSLAMILSNNAAAKDLG--WTRRMNVIK---------GISDALSYMHN-DCFP 928
G + I+ +LG R N +K I A++Y+ + +C
Sbjct: 76 GI---IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC-- 130
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD---SSNWTELAGTYGYVAPELAYTMK 985
VHRDI+ +N+L+ + DFG++++++ + ++ T L +++PE +
Sbjct: 131 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRR 186
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
T DV+ F V E++ GK P F + + D + P L P
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQP--FFWLENKDVIGVLEKGDRLPKPDLCPP------- 237
Query: 1045 LISIVEVAISCLDENPESRP 1064
+ + C D +P RP
Sbjct: 238 --VLYTLMTRCWDYDPSDRP 255
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 823 IGKGGQGSVYKAELAS--GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY 880
+G+G G VY+ + GE + V + +++F++E + + H +IVK
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 881 GFCSHVRHSLAMILSNNAAAKDLG--WTRRMNVIK---------GISDALSYMHN-DCFP 928
G + I+ +LG R N +K I A++Y+ + +C
Sbjct: 80 GI---IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC-- 134
Query: 929 PIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD---SSNWTELAGTYGYVAPELAYTMK 985
VHRDI+ +N+L+ + DFG++++++ + ++ T L +++PE +
Sbjct: 135 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRR 190
Query: 986 VTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
T DV+ F V E++ GK P F + + D + P L P
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQP--FFWLENKDVIGVLEKGDRLPKPDLCPP------- 241
Query: 1045 LISIVEVAISCLDENPESRP 1064
+ + C D +P RP
Sbjct: 242 --VLYTLMTRCWDYDPSDRP 259
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 20/237 (8%)
Query: 823 IGKGGQGSVYKAELASGEI-VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV---- 877
IG G QG V A A E VA+KK P + T + E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 878 -----KFYGFCSHVRHSLAMILSN--NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930
K V + ++ +N +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKC 990
+HRD+ N+++ D + DFG+A+ E+ Y Y APE+ M E
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVILGMGYKENV 206
Query: 991 DVYSFGVLALEVIKGK--HP-RDFIXXXXXXXLNLNIALDEMLDPRLPTPSCIVQDK 1044
D++S G + E++ K P RD+I L E + PT V+++
Sbjct: 207 DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
Length = 400
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 902 DLGWTRRM--NVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV---SDFGIA 956
D +T R + K I +A+ Y+H+ I HRD+ +N+L + +DFG A
Sbjct: 155 DQAFTEREASEIXKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
Query: 957 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
K +S T Y YVAPE+ K + CD +S GV+ ++ G P
Sbjct: 212 KETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 75 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 133
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN-LSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN L+ +P L N L NL L L NSL+ +IP
Sbjct: 134 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 190
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 75 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 133
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N L+ L L NL TL L ENSL +IP F
Sbjct: 134 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 192
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 75 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 133
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N L + L L NL TL + NSL
Sbjct: 134 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 185
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 108
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 281
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 282 PKNCPGP----------VYRIMTQCWQHQPEDRP 305
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGN-LSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN L+ +P L N L NL L L NSL+ +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N L+ L L NL TL L ENSL +IP F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 191
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N L + L L NL TL + NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 406 GNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLY 465
G L L TLDL N L S+P L +L+ L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 466 DNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPS 523
N L PG + + L+L NN L+ L L NL L L NSL+ +IP
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPK 189
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 166 GNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLH 225
G L L TL L N L S+P L +L++L + +N+ + +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 226 NNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEF 285
N L P L L LSL N L+ L L NL TL L ENSL +IP F
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGF 191
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 214 GNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273
G L L TL L +N L S+P L +L++L + +N+L+ +L L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQL-QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSL 325
N L P L L+L N L + L L NL TL + NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex
With Crizotinib (Pf-02341066)
Length = 327
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 208
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 266
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 267 PKNCPGP----------VYRIMTQCWQHQPEDRP 290
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 60/282 (21%), Positives = 111/282 (39%), Gaps = 49/282 (17%)
Query: 823 IGKGGQGSVYKA---ELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G VY+ ++ GE VAVK + + + EFLNE + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 82
Query: 877 VKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISDA 918
V+ G S + +L ++ NN + + I+D
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----YG 974
++Y++ F VHR+++++N ++ D + DFG+ + + +++ G
Sbjct: 143 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 197
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALD-EMLDP 1032
++APE T D++SFGV+ E+ + P + L +D LD
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV----LKFVMDGGYLDQ 253
Query: 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
P + ++ C NP RPT ++ LLK
Sbjct: 254 PDNCPE--------RVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 60/282 (21%), Positives = 111/282 (39%), Gaps = 49/282 (17%)
Query: 823 IGKGGQGSVYKA---ELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876
+G+G G VY+ ++ GE VAVK + + + EFLNE + ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHV 83
Query: 877 VKFYGFCSHVRHSLAMI------------------LSNNAAAKDLGWTRRMNVIKGISDA 918
V+ G S + +L ++ NN + + I+D
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 919 LSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT----YG 974
++Y++ F VHR+++++N ++ D + DFG+ + + +++ G
Sbjct: 144 MAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 198
Query: 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALD-EMLDP 1032
++APE T D++SFGV+ E+ + P + L +D LD
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV----LKFVMDGGYLDQ 254
Query: 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074
P + ++ C NP RPT ++ LLK
Sbjct: 255 PDNCPE--------RVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine
Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 59/285 (20%), Positives = 111/285 (38%), Gaps = 42/285 (14%)
Query: 808 EEIIRATNDFDDEHCIGKGGQGSVYKAELASGE----IVAVKKFHSPLPGEMTFQQEFLN 863
E+++ F +GKG GSV +A+L + VAVK + + + EFL
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE-EFLR 74
Query: 864 EVKALTEIRHRNIVKFYGFCSHVR--------------------HSLAMILSNNAAAKDL 903
E + E H ++ K G R H+ + +L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 904 GWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963
+ + I+ + Y+ + F +HRD++++N +L D V+DFG+++ +
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 964 SNWTELAGTY--GYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFIXXXXXXXL 1020
A ++A E T DV++FGV E++ +G+ P +
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP--YAGIENAEIY 249
Query: 1021 NLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT 1065
N I + + P P C+ + + ++ C +P+ RP+
Sbjct: 250 NYLIGGNRLKQP----PECMEE-----VYDLMYQCWSADPKQRPS 285
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 858 QQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM--------ILSNNAAAKDLGWTRRM 909
Q+ E + ++H NIV+ + S H + + + A +
Sbjct: 65 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS 124
Query: 910 NVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA---HVSDFGIAKFLKPDSSNW 966
+ I+ I +A+ + H +VHRD+ +N+LL + ++DFG+A ++ + W
Sbjct: 125 HCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 181
Query: 967 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
AGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVYSEQDELDFLMEALIISKFNHQ 108
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 281
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 282 PKNCPGP----------VYRIMTQCWQHQPEDRP 305
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 85
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 146 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 200
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 258
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 259 PKNCPGP----------VYRIMTQCWQHQPEDRP 282
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 823 IGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
IG G QG V A + G VAVKK P + T + E+ L + H+NI+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ-THAKRAYRELVLLKCVNHKNIISLLN 90
Query: 882 FCSHVRH-------SLAMILSNNAAAK----DLGWTRRMNVIKGISDALSYMHNDCFPPI 930
+ + L M L + + +L R ++ + + ++H+ I
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGI 147
Query: 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW--TELAGTYGYVAPELAYTMKVTE 988
+HRD+ N+++ D + DFG+A + +N+ T T Y APE+ M
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLA---RTACTNFMMTPYVVTRYYRAPEVILGMGYAA 204
Query: 989 KCDVYSFGVLALEVIKG 1005
D++S G + E++KG
Sbjct: 205 NVDIWSVGCIMGELVKG 221
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 120
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 181 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 235
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 293
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 294 PKNCPGP----------VYRIMTQCWQHQPEDRP 317
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 208 SIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNL 267
S+ SL NL L + H F+ I + L +L L M + + +P L NL
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE--NFLPDIFTELRNL 472
Query: 268 ATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSG 327
L L + L P+ F +L SL +LN+ N+L + LT+L +++H N
Sbjct: 473 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532
Query: 328 SIP 330
S P
Sbjct: 533 SCP 535
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 384 LRSLSMLSLGYNKLSGS-IPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGY 442
L SL +L + N + +P L NL LDL L P+ F +L SL L++
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503
Query: 443 NKLSGSIPHSL-GNLTNLDALYLYDNSLSGSIP 474
N+L S+P + LT+L ++L+ N S P
Sbjct: 504 NQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 95/237 (40%), Gaps = 31/237 (13%)
Query: 384 LRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLS---GSIPSEFGNLRSLSTLSL 440
L+SL L+ NK G S +L +L LDL N LS S+FG SL L L
Sbjct: 324 LKSLKRLTFTSNK--GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGT-TSLKYLDL 380
Query: 441 GYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQS 500
+N G I S N L+ L D S NL+ +S S+ S
Sbjct: 381 SFN---GVITMS-SNFLGLEQLEHLDFQHS--------NLKQMSEF---------SVFLS 419
Query: 501 LGNLSNLVILYLYNNSLFDSIPSELGNLRSLSML--SFAYNKLSGSIP--HSLGVLDLSS 556
L NL L I + + F+ I + L +L L M SF N L +L LDLS
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 557 NHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPK 613
+ PT L+ L L +A NQL L L+ + L +N S P+
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 390 LSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSI 449
L L +N L +S + L LDL + + +L LSTL L N +
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 450 PHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKL-SGSIPQSLGNLSNLV 508
+ L++L L + +L+ IG+L+++ L + +N + S +P+ NL+NL
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE 152
Query: 509 ILYLYNNSL 517
L L +N +
Sbjct: 153 HLDLSSNKI 161
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 479 NLRSISNLALNNNKLS--GSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSF 536
+L S+ L L+ N LS G QS ++L L L N + ++ S L L L F
Sbjct: 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDF 403
Query: 537 AYNKLSGSIPHSLGV-------LDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSP 589
++ L S+ + LD+S H L+ L L +A N P
Sbjct: 404 QHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 463
Query: 590 KLGS-LAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIP 636
+ + L L LDLS +L P +F +L L LN+++NQ + +P
Sbjct: 464 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL-KSVP 510
Score = 30.4 bits (67), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 537 AYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQ 596
AY LS L L L+ N I L+ L KL+ + L+ + +G L
Sbjct: 71 AYQSLS-----HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 597 LEHLDLSSNRL-SNSIPKSFGNLVKLHYLNLSNNQ 630
L+ L+++ N + S +P+ F NL L +L+LS+N+
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase
In Complex With Ch5424802
Length = 344
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 110
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 171 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 225
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 283
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 284 PKNCPGP----------VYRIMTQCWQHQPEDRP 307
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind
E804
Length = 324
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 823 IGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881
+G+G +VYK + + +VA+K+ L E + EV L +++H NIV +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 882 FCSHVRHSLAMILSN-----NAAAKDLGWTRRMNVIK----GISDALSYMHNDCFPPIVH 932
H SL ++ D G M+ +K + L+Y H ++H
Sbjct: 68 II-HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLH 123
Query: 933 RDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE-LAYTMKVTEKCD 991
RD+ +N+L++ E ++DFG+A+ + + T Y P+ L + + + D
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQID 183
Query: 992 VYSFGVLALEVIKGK 1006
++ G + E+ G+
Sbjct: 184 MWGVGCIFYEMATGR 198
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 209
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 267
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 268 PKNCPGP----------VYRIMTQCWQHQPEDRP 291
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 100
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 161 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 215
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 273
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 274 PKNCPGP----------VYRIMTQCWQHQPEDRP 297
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 820 EHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIV 877
E +G+G V L + + AVK PG + + EV+ L + + HRN++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHI--RSRVFREVEMLYQCQGHRNVL 74
Query: 878 ----------KFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCF 927
+FY +R ILS+ + V++ ++ AL ++HN
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRG--GSILSHIHKRRHFNELEASVVVQDVASALDFLHNK-- 130
Query: 928 PPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSS----NWTEL---AGTYGYVA 977
I HRD+ +N+L + N+ + DF + +K + + EL G+ Y+A
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 978 PEL--AYTMKVT---EKCDVYSFGVLALEVIKGKHP 1008
PE+ A++ + + ++CD++S GV+ ++ G P
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY--RASYYRKGGCAMLP 209
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 267
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 268 PKNCPGP----------VYRIMTQCWQHQPEDRP 291
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 815 NDFDDEHCIGKGGQGSVYKAELASGEI---VAVKKFHSPLPGEMTFQQEFLNEVKALTEI 871
ND + IG+G G V KA + + A+K+ + ++F E++ L ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 79
Query: 872 -RHRNIVKFYGFCSH-------------------VRHSLAM-----ILSNNAAAKDLGWT 906
H NI+ G C H +R S + N+ A L
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 907 RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966
+ ++ ++ + Y+ F +HR+++++N+L+ + A ++DFG+++
Sbjct: 140 QLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSR------GQE 190
Query: 967 TELAGTYG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVI 1003
+ T G ++A E L Y++ T DV+S+GVL E++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 232
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 107/274 (39%), Gaps = 53/274 (19%)
Query: 823 IGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQE--FLNEVKALTEIRHR 874
+G G G VY+ +++ S VAVK LP + Q E FL E +++ H+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 111
Query: 875 NIVKFYGFC--SHVRHSLAMILSNNAAAKDLGWTRR-------------MNVIKGISDAL 919
NIV+ G S R L +++ L TR ++V + I+
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 920 SYMHNDCFPPIVHRDISSKNVLLDFDNE---AHVSDFGIAKFLKPDSSNWTELAGT---- 972
Y+ + F +HRDI+++N LL A + DFG+A+ + + + G
Sbjct: 172 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLP 226
Query: 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIXXXXXXXLNLNIALDEMLD 1031
++ PE T K D +SFGVL E+ G P + L + M
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDP 284
Query: 1032 PR-LPTPSCIVQDKLISIVEVAISCLDENPESRP 1064
P+ P P + + C PE RP
Sbjct: 285 PKNCPGP----------VYRIMTQCWQHQPEDRP 308
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 844 VKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS-------- 895
+KK S ++E EV L ++ H NI+ + + R + +IL
Sbjct: 45 IKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-RTDVVLILELVSGGELF 103
Query: 896 NNAAAKD-LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN----EAHV 950
+ A K+ L + IK I D ++Y+H I H D+ +N++L N +
Sbjct: 104 DFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 951 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008
DFG+A ++ D + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 161 IDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 385 RSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNK 444
S+ +L+L N L+GS+ L + LDL++N + SIP + +L++L L++ N+
Sbjct: 428 ESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQ 484
Query: 445 LSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNL 504
L LT+L ++L+DN + PG +R +S NK SG + S G++
Sbjct: 485 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG----IRYLSEWI---NKHSGVVRNSAGSV 537
Query: 505 S 505
+
Sbjct: 538 A 538
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 160 LIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSL--GNLT 217
+ PPS S+ L+ N +DS+ L+ L L L N +L N++
Sbjct: 347 VCPPSP---SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMS 403
Query: 218 NLATLYLHNNSL-FDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENS 276
+L TL + NSL + S+ +L+L N L+GS+ L + L L+ N
Sbjct: 404 SLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNR 461
Query: 277 LSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIP 330
+ SIP + +L++L LN+ N+L + LT+L +++H+N + P
Sbjct: 462 I-MSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 354 PPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSL--GNLTNL 411
PPS S+ L N DS+ L+ L L L N L +L N+++L
Sbjct: 349 PPSP---SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSL 405
Query: 412 ATLDLYDNSL-SGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLS 470
TLD+ NSL S + S+ L+L N L+GS+ L + L L++N +
Sbjct: 406 ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRI- 462
Query: 471 GSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRS 530
SIP ++ +L+++ L + +N+L L++L ++L++N + P
Sbjct: 463 MSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------G 515
Query: 531 LSMLSFAYNKLSGSIPHSLG 550
+ LS NK SG + +S G
Sbjct: 516 IRYLSEWINKHSGVVRNSAG 535
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 482 SISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSL--FDSIPSELGNLRSLSMLSFAYN 539
S + L N + S+ Q L L L L N L F + N+ SL L + N
Sbjct: 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLN 413
Query: 540 KL-------SGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLG 592
L + + S+ VL+LSSN + G + L +K++ N + +
Sbjct: 414 SLNSHAYDRTCAWAESILVLNLSSNMLTGSV---FRCLPPKVKVLDLHNNRIMSIPKDVT 470
Query: 593 SLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIP 636
L L+ L+++SN+L + F L L Y+ L +N + P
Sbjct: 471 HLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 33.1 bits (74), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 594 LAQLEHLDLSSNRLSN-SIPKSFGNLVKLHYLNLSNNQFSR 633
+A L HLDLS N + K FGNL KL +L LS +F +
Sbjct: 120 MASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 864 EVKALTEIRHRNIVKFYG-FCSHVRHSLAMILS----------NNAAAKDLGWTRRMNVI 912
E++ L +RH+N+++ + + + M++ ++ K +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 913 KGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--ELA 970
+ D L Y+H+ IVH+DI N+LL +S G+A+ L P +++ T
Sbjct: 116 CQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 971 GTYGYVAPELAYTMKVTE--KCDVYSFGVLALEVIKGKHP 1008
G+ + PE+A + K D++S GV + G +P
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 438 LSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSI 497
L L N+++ P +L NL LY N L+ G L ++ L LN+N L SI
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK-SI 96
Query: 498 PQ-SLGNLSNLVILYLYNN 515
P+ + NL +L +YLYNN
Sbjct: 97 PRGAFDNLKSLTHIYLYNN 115
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 246 LSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGII 305
L L N+++ P +L NL LY N L+ F L L+ L+L N L I
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIP 97
Query: 306 PHSLGNLTNLATLYIHNN 323
+ NL +L +Y++NN
Sbjct: 98 RGAFDNLKSLTHIYLYNN 115
Score = 37.4 bits (85), Expect = 0.051, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 409 TNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNS 468
T+ L L +N ++ P F +L +L L NKL+ LT L L L DN
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92
Query: 469 LSGSIPGEIGNLRSISNLALNNN 491
L G NL+S++++ L NN
Sbjct: 93 LKSIPRGAFDNLKSLTHIYLYNN 115
Score = 36.6 bits (83), Expect = 0.081, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 366 LYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSI 425
L+L +N + P +L +L L NKL+ LT L LDL DN L
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIP 97
Query: 426 PSEFGNLRSLSTLSLGYN 443
F NL+SL+ + L YN
Sbjct: 98 RGAFDNLKSLTHIYL-YN 114
Score = 35.4 bits (80), Expect = 0.19, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 545 IPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSS 604
IP L L++N I P L L +L N+L+ + L QL LDL+
Sbjct: 31 IPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90
Query: 605 NRLSNSIPK-SFGNLVKLHYLNLSNN 629
N L SIP+ +F NL L ++ L NN
Sbjct: 91 NHL-KSIPRGAFDNLKSLTHIYLYNN 115
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 198 LSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGS 256
L L N+ + P +L NL LY ++N L +IP+ + L L+ L L N L S
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKL-TAIPTGVFDKLTQLTQLDLNDNHLK-S 95
Query: 257 IPH-SLGNLTNLATLYLYEN 275
IP + NL +L +YLY N
Sbjct: 96 IPRGAFDNLKSLTHIYLYNN 115
Score = 34.7 bits (78), Expect = 0.26, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 217 TNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENS 276
T+ L+L+NN + P +L +L L NKL+ LT L L L +N
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92
Query: 277 LSGSIPSEFGNLRSLSMLNLGYN 299
L F NL+SL+ + L YN
Sbjct: 93 LKSIPRGAFDNLKSLTHIYL-YN 114
Score = 34.7 bits (78), Expect = 0.29, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 390 LSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSI 449
L L N+++ P +L NL L N L+ F L L+ L L N L SI
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK-SI 96
Query: 450 PH-SLGNLTNLDALYLYDN 467
P + NL +L +YLY+N
Sbjct: 97 PRGAFDNLKSLTHIYLYNN 115
Score = 33.1 bits (74), Expect = 0.87, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 457 TNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNS 516
T+ L+L +N ++ PG +L ++ L N+NKL+ L+ L L L +N
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92
Query: 517 LFDSIP-SELGNLRSLSMLSFAYN 539
L SIP NL+SL+ + + YN
Sbjct: 93 L-KSIPRGAFDNLKSLTHI-YLYN 114
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 160 LIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPH-SLGNLTN 218
L P +L NL L+ N L+ F L L+ L L N SIP + NL +
Sbjct: 48 LEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK-SIPRGAFDNLKS 106
Query: 219 LATLYLHNN 227
L +YL+NN
Sbjct: 107 LTHIYLYNN 115
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 174 LHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSI 233
L L +N ++ P F +L +L L NK + LT L L L++N L SI
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL-KSI 96
Query: 234 P-SELGNLRSLSMLSLGYN 251
P NL+SL+ + L YN
Sbjct: 97 PRGAFDNLKSLTHIYL-YN 114
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 810 IIRATNDFDDEHCIGKG--GQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKA 867
I+ ++ +D IG G G + + +L + E+VAVK + Q+E +N
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINH--- 70
Query: 868 LTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDLGWTRRMNVIKGISD---------- 917
+RH NIV+F H LA+I+ A+ +L + R N + D
Sbjct: 71 -RSLRHPNIVRFKEVILTPTH-LAIIM-EYASGGEL-YERICNAGRFSEDEARFFFQQLL 126
Query: 918 -ALSYMHNDCFPPIVHRDISSKNVLLDFDNEAH--VSDFGIAK----FLKPDSSNWTELA 970
+SY H+ I HRD+ +N LLD + DFG +K +P S+
Sbjct: 127 SGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----V 178
Query: 971 GTYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHP 1008
GT Y+APE+ + K DV+S GV ++ G +P
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,717,150
Number of Sequences: 62578
Number of extensions: 1218838
Number of successful extensions: 6628
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 400
Number of HSP's that attempted gapping in prelim test: 2784
Number of HSP's gapped (non-prelim): 2069
length of query: 1075
length of database: 14,973,337
effective HSP length: 109
effective length of query: 966
effective length of database: 8,152,335
effective search space: 7875155610
effective search space used: 7875155610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)