Query 042958
Match_columns 1075
No_of_seqs 1130 out of 6979
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 11:21:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042958.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042958hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-109 2E-114 1072.7 65.0 903 2-1074 29-949 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.9E-61 4E-66 623.9 32.0 496 48-660 93-588 (968)
3 KOG1187 Serine/threonine prote 100.0 1.6E-44 3.4E-49 402.9 24.7 269 802-1074 62-350 (361)
4 KOG0472 Leucine-rich repeat pr 100.0 4.6E-45 1E-49 378.0 -6.0 468 218-704 46-541 (565)
5 KOG0472 Leucine-rich repeat pr 100.0 7.1E-46 1.5E-50 384.0 -14.3 483 168-680 44-541 (565)
6 KOG0575 Polo-like serine/threo 100.0 1.9E-41 4.2E-46 373.0 18.8 242 815-1071 18-268 (592)
7 KOG0581 Mitogen-activated prot 100.0 2.6E-41 5.6E-46 352.0 18.6 245 816-1071 80-334 (364)
8 KOG0192 Tyrosine kinase specif 100.0 2.8E-41 6.1E-46 373.1 18.8 245 815-1074 41-301 (362)
9 KOG4194 Membrane glycoprotein 100.0 1.5E-42 3.3E-47 374.3 5.0 366 99-466 80-448 (873)
10 KOG4194 Membrane glycoprotein 100.0 7.8E-42 1.7E-46 368.9 6.4 365 171-537 80-447 (873)
11 KOG0615 Serine/threonine prote 100.0 1.1E-40 2.4E-45 348.4 12.5 247 813-1071 170-436 (475)
12 KOG0591 NIMA (never in mitosis 100.0 5.3E-41 1.2E-45 333.0 9.5 244 815-1069 19-278 (375)
13 KOG1026 Nerve growth factor re 100.0 3.5E-39 7.7E-44 369.3 17.1 244 815-1074 486-760 (774)
14 KOG0197 Tyrosine kinases [Sign 100.0 5.1E-39 1.1E-43 351.3 16.3 239 817-1074 208-459 (468)
15 KOG0598 Ribosomal protein S6 k 100.0 8.3E-39 1.8E-43 333.4 15.4 237 813-1064 23-269 (357)
16 KOG0593 Predicted protein kina 100.0 5.5E-39 1.2E-43 322.0 12.2 253 815-1071 2-283 (396)
17 KOG0193 Serine/threonine prote 100.0 2.4E-38 5.3E-43 346.0 13.9 254 808-1074 385-651 (678)
18 KOG0618 Serine/threonine phosp 100.0 8E-40 1.7E-44 372.6 -0.3 506 127-677 4-510 (1081)
19 KOG0595 Serine/threonine-prote 100.0 2.9E-37 6.4E-42 323.9 17.3 194 813-1011 8-216 (429)
20 KOG0597 Serine-threonine prote 100.0 8E-38 1.7E-42 337.0 11.6 241 815-1071 2-250 (808)
21 KOG0592 3-phosphoinositide-dep 100.0 2.6E-37 5.7E-42 334.0 15.3 245 811-1071 69-337 (604)
22 KOG0659 Cdk activating kinase 100.0 4.9E-37 1.1E-41 303.4 15.5 254 815-1072 2-281 (318)
23 KOG0196 Tyrosine kinase, EPH ( 100.0 5.6E-38 1.2E-42 350.4 9.2 241 817-1074 631-889 (996)
24 KOG0618 Serine/threonine phosp 100.0 2.4E-39 5.2E-44 368.7 -1.8 506 78-653 3-510 (1081)
25 KOG0600 Cdc2-related protein k 100.0 4.6E-37 1E-41 329.4 13.6 254 814-1071 116-399 (560)
26 KOG0661 MAPK related serine/th 100.0 7.3E-37 1.6E-41 325.4 11.8 255 812-1072 7-291 (538)
27 KOG0198 MEKK and related serin 100.0 1.8E-36 3.9E-41 323.7 14.5 244 814-1072 16-276 (313)
28 KOG0582 Ste20-like serine/thre 100.0 6.1E-36 1.3E-40 315.9 17.7 252 813-1071 24-292 (516)
29 KOG0578 p21-activated serine/t 100.0 2.6E-36 5.7E-41 330.0 14.1 243 814-1071 272-522 (550)
30 KOG0201 Serine/threonine prote 100.0 2.9E-36 6.2E-41 318.7 12.0 242 814-1071 12-262 (467)
31 KOG4721 Serine/threonine prote 100.0 1.9E-36 4.2E-41 325.7 9.9 232 818-1075 127-367 (904)
32 KOG1095 Protein tyrosine kinas 100.0 1.7E-35 3.6E-40 352.0 18.6 244 814-1074 691-959 (1025)
33 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.8E-35 3.9E-40 335.8 18.0 247 813-1074 5-332 (338)
34 KOG0583 Serine/threonine prote 100.0 5.2E-35 1.1E-39 327.0 21.0 245 812-1071 14-274 (370)
35 KOG0616 cAMP-dependent protein 100.0 4.5E-35 9.7E-40 293.8 15.6 230 815-1063 44-283 (355)
36 KOG0194 Protein tyrosine kinas 100.0 2.4E-35 5.3E-40 328.7 14.2 247 813-1074 155-418 (474)
37 KOG0444 Cytoskeletal regulator 100.0 3.7E-37 7.9E-42 334.0 -1.0 337 288-631 6-351 (1255)
38 KOG4257 Focal adhesion tyrosin 100.0 6.1E-35 1.3E-39 317.4 16.0 244 814-1074 388-647 (974)
39 KOG0694 Serine/threonine prote 100.0 5.8E-35 1.2E-39 325.5 15.9 240 812-1066 365-613 (694)
40 KOG3653 Transforming growth fa 100.0 1.9E-34 4.2E-39 306.8 18.6 251 815-1073 210-500 (534)
41 KOG0580 Serine/threonine prote 100.0 2E-35 4.3E-40 288.0 10.1 241 813-1071 20-272 (281)
42 KOG0585 Ca2+/calmodulin-depend 100.0 1.5E-34 3.3E-39 307.0 16.6 247 812-1071 94-371 (576)
43 KOG0444 Cytoskeletal regulator 100.0 3E-37 6.5E-42 334.6 -4.2 365 144-517 6-374 (1255)
44 PHA02988 hypothetical protein; 100.0 4.7E-34 1E-38 314.7 20.5 237 820-1074 25-277 (283)
45 KOG0660 Mitogen-activated prot 100.0 1.1E-34 2.3E-39 301.2 13.5 256 812-1071 19-309 (359)
46 KOG0663 Protein kinase PITSLRE 100.0 2E-34 4.3E-39 293.4 14.8 254 814-1071 75-360 (419)
47 KOG1094 Discoidin domain recep 100.0 5.5E-34 1.2E-38 308.6 19.0 250 814-1073 537-801 (807)
48 KOG0588 Serine/threonine prote 100.0 2.8E-34 6.2E-39 316.6 16.7 241 815-1071 12-262 (786)
49 cd05631 STKc_GRK4 Catalytic do 100.0 3.6E-34 7.9E-39 316.6 17.7 244 816-1071 1-260 (285)
50 cd05571 STKc_PKB Catalytic dom 100.0 6E-34 1.3E-38 320.5 18.3 235 821-1071 1-250 (323)
51 cd05096 PTKc_DDR1 Catalytic do 100.0 1.9E-33 4.1E-38 314.2 21.8 250 815-1074 5-303 (304)
52 KOG0605 NDR and related serine 100.0 4.7E-34 1E-38 309.5 15.6 243 813-1070 139-443 (550)
53 KOG2345 Serine/threonine prote 100.0 2E-34 4.3E-39 282.0 10.3 251 812-1074 18-298 (302)
54 KOG0658 Glycogen synthase kina 100.0 5.6E-34 1.2E-38 296.5 14.1 246 815-1071 24-305 (364)
55 PLN00034 mitogen-activated pro 100.0 1.4E-33 3E-38 321.7 18.6 244 815-1072 74-328 (353)
56 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-33 2.8E-38 316.3 17.8 233 823-1071 1-246 (312)
57 KOG1025 Epidermal growth facto 100.0 3.7E-34 8E-39 320.6 13.0 241 817-1073 698-954 (1177)
58 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-33 2.3E-38 313.7 16.5 238 815-1071 1-253 (291)
59 KOG0589 Serine/threonine prote 100.0 4.4E-34 9.4E-39 312.2 13.0 244 814-1072 3-258 (426)
60 PTZ00263 protein kinase A cata 100.0 1.4E-33 3.1E-38 318.2 17.2 238 815-1071 18-270 (329)
61 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.6E-33 5.6E-38 312.8 18.9 252 814-1071 4-287 (303)
62 KOG0611 Predicted serine/threo 100.0 4.7E-34 1E-38 295.8 11.8 240 814-1071 52-302 (668)
63 PHA03212 serine/threonine kina 100.0 3.1E-33 6.6E-38 321.1 19.8 246 814-1071 91-375 (391)
64 cd05593 STKc_PKB_gamma Catalyt 100.0 3.5E-33 7.6E-38 314.6 19.9 235 821-1071 1-250 (328)
65 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-33 3.5E-38 294.4 15.8 255 814-1072 10-302 (323)
66 cd05595 STKc_PKB_beta Catalyti 100.0 3E-33 6.4E-38 314.7 19.0 235 821-1071 1-250 (323)
67 KOG2052 Activin A type IB rece 100.0 2.2E-33 4.9E-38 296.4 16.6 253 813-1073 209-500 (513)
68 KOG0599 Phosphorylase kinase g 100.0 8.4E-34 1.8E-38 280.0 12.5 247 813-1071 15-282 (411)
69 cd07862 STKc_CDK6 Catalytic do 100.0 3.1E-33 6.7E-38 310.4 18.7 252 815-1071 1-286 (290)
70 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2E-33 4.3E-38 319.5 17.5 251 816-1071 1-289 (338)
71 cd08228 STKc_Nek6 Catalytic do 100.0 6.5E-33 1.4E-37 303.9 21.0 249 815-1074 2-263 (267)
72 cd05106 PTKc_CSF-1R Catalytic 100.0 3.4E-33 7.4E-38 319.9 19.4 248 811-1074 34-370 (374)
73 cd05108 PTKc_EGFR Catalytic do 100.0 9.3E-33 2E-37 310.3 22.3 245 814-1074 6-266 (316)
74 KOG0033 Ca2+/calmodulin-depend 100.0 4.5E-35 9.7E-40 284.9 2.9 245 813-1071 9-266 (355)
75 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.3E-33 9.4E-38 308.5 19.2 251 815-1071 5-284 (288)
76 cd05054 PTKc_VEGFR Catalytic d 100.0 2.5E-33 5.5E-38 316.6 17.5 246 814-1074 6-331 (337)
77 cd05104 PTKc_Kit Catalytic dom 100.0 5.3E-33 1.1E-37 318.7 19.6 246 813-1074 33-372 (375)
78 cd07848 STKc_CDKL5 Catalytic d 100.0 4.1E-33 8.8E-38 309.0 16.9 252 815-1071 1-283 (287)
79 cd05589 STKc_PKN Catalytic dom 100.0 7.9E-33 1.7E-37 311.7 19.1 239 817-1071 1-256 (324)
80 cd05048 PTKc_Ror Catalytic Dom 100.0 1.2E-32 2.6E-37 304.6 20.1 244 815-1074 5-281 (283)
81 cd05618 STKc_aPKC_iota Catalyt 100.0 6E-33 1.3E-37 312.9 17.9 238 821-1066 1-250 (329)
82 cd05594 STKc_PKB_alpha Catalyt 100.0 4.8E-33 1E-37 313.6 16.7 235 821-1071 1-251 (325)
83 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.1E-33 1.1E-37 314.7 16.8 247 815-1072 1-257 (333)
84 PTZ00426 cAMP-dependent protei 100.0 5.8E-33 1.3E-37 313.6 17.1 239 814-1071 29-283 (340)
85 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.5E-32 3.3E-37 300.5 19.9 243 814-1074 4-263 (266)
86 cd05588 STKc_aPKC Catalytic do 100.0 7.2E-33 1.6E-37 312.4 17.8 243 821-1071 1-261 (329)
87 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-32 2.4E-37 302.0 18.8 249 815-1074 2-263 (267)
88 cd05608 STKc_GRK1 Catalytic do 100.0 8.3E-33 1.8E-37 304.8 17.7 238 823-1071 1-256 (280)
89 cd06649 PKc_MEK2 Catalytic dom 100.0 2.4E-32 5.1E-37 308.7 21.7 250 814-1072 4-301 (331)
90 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-32 2.8E-37 309.6 19.2 235 821-1071 2-255 (323)
91 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-32 3.3E-37 314.1 20.1 254 813-1071 19-314 (359)
92 cd05091 PTKc_Ror2 Catalytic do 100.0 1.2E-32 2.6E-37 304.5 18.1 243 816-1074 6-281 (283)
93 KOG4278 Protein tyrosine kinas 100.0 8.6E-34 1.9E-38 307.5 8.5 249 808-1074 260-521 (1157)
94 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.3E-32 7.2E-37 296.2 21.2 240 815-1074 4-256 (256)
95 cd05591 STKc_nPKC_epsilon Cata 100.0 1.3E-32 2.8E-37 309.6 18.2 235 821-1071 1-253 (321)
96 cd05590 STKc_nPKC_eta Catalyti 100.0 1.5E-32 3.2E-37 308.6 18.5 230 821-1066 1-241 (320)
97 PF07714 Pkinase_Tyr: Protein 100.0 5.1E-33 1.1E-37 302.6 14.0 237 820-1073 4-259 (259)
98 KOG1989 ARK protein kinase fam 100.0 8.1E-33 1.8E-37 319.3 16.2 242 814-1073 36-308 (738)
99 cd05587 STKc_cPKC Catalytic do 100.0 2.6E-32 5.7E-37 307.4 19.7 235 816-1066 1-246 (324)
100 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.3E-32 5.1E-37 298.4 18.7 245 812-1074 3-259 (261)
101 KOG0574 STE20-like serine/thre 100.0 2.2E-34 4.8E-39 287.3 2.4 238 817-1071 35-282 (502)
102 cd05592 STKc_nPKC_theta_delta 100.0 2.6E-32 5.6E-37 306.0 19.4 234 821-1070 1-246 (316)
103 cd05049 PTKc_Trk Catalytic dom 100.0 2.6E-32 5.6E-37 301.4 19.0 244 814-1074 4-279 (280)
104 cd05616 STKc_cPKC_beta Catalyt 100.0 2.6E-32 5.7E-37 307.3 19.2 235 816-1066 1-246 (323)
105 cd05116 PTKc_Syk Catalytic dom 100.0 4.9E-32 1.1E-36 295.0 20.6 238 822-1074 2-253 (257)
106 cd07874 STKc_JNK3 Catalytic do 100.0 2E-32 4.4E-37 312.8 18.4 255 812-1071 14-310 (355)
107 cd05111 PTK_HER3 Pseudokinase 100.0 4.9E-32 1.1E-36 298.7 20.7 244 815-1074 7-266 (279)
108 KOG0032 Ca2+/calmodulin-depend 100.0 3.7E-32 7.9E-37 303.4 19.8 247 813-1071 33-292 (382)
109 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.3E-32 1.4E-36 293.8 21.2 241 815-1074 4-256 (256)
110 cd05605 STKc_GRK4_like Catalyt 100.0 2E-32 4.3E-37 302.7 17.5 244 816-1071 1-260 (285)
111 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.3E-32 1.8E-36 295.1 22.3 249 815-1074 2-263 (267)
112 cd05072 PTKc_Lyn Catalytic dom 100.0 3.5E-32 7.6E-37 297.0 19.3 242 814-1074 5-259 (261)
113 PTZ00283 serine/threonine prot 100.0 1.7E-32 3.8E-37 323.6 18.1 246 812-1072 29-297 (496)
114 cd05062 PTKc_IGF-1R Catalytic 100.0 3.4E-32 7.5E-37 299.8 18.8 245 813-1074 4-276 (277)
115 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.6E-32 1.4E-36 294.6 20.8 243 814-1074 5-258 (260)
116 cd05626 STKc_LATS2 Catalytic d 100.0 2.6E-32 5.5E-37 314.4 18.4 244 816-1071 2-304 (381)
117 cd07868 STKc_CDK8 Catalytic do 100.0 5.2E-32 1.1E-36 304.6 20.4 184 820-1011 6-218 (317)
118 cd05570 STKc_PKC Catalytic dom 100.0 2.9E-32 6.3E-37 306.1 18.3 235 821-1071 1-251 (318)
119 KOG0983 Mitogen-activated prot 100.0 2.2E-32 4.9E-37 270.4 15.1 239 817-1071 94-348 (391)
120 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.7E-33 1.7E-37 316.1 13.7 243 815-1072 1-285 (350)
121 cd05033 PTKc_EphR Catalytic do 100.0 8E-32 1.7E-36 295.0 21.1 243 814-1074 3-263 (266)
122 KOG0577 Serine/threonine prote 100.0 1.1E-32 2.3E-37 298.2 13.7 238 817-1071 28-277 (948)
123 PRK13184 pknD serine/threonine 100.0 3.5E-32 7.7E-37 327.0 19.8 246 815-1073 2-287 (932)
124 KOG0199 ACK and related non-re 100.0 1.8E-32 3.8E-37 302.1 15.5 238 818-1072 113-368 (1039)
125 cd05582 STKc_RSK_N N-terminal 100.0 1.2E-32 2.6E-37 309.6 14.5 231 821-1068 2-245 (318)
126 KOG1024 Receptor-like protein 100.0 1.4E-32 3E-37 284.4 13.6 250 807-1073 276-552 (563)
127 cd05090 PTKc_Ror1 Catalytic do 100.0 7.3E-32 1.6E-36 298.2 20.3 242 815-1074 5-281 (283)
128 cd05599 STKc_NDR_like Catalyti 100.0 2E-32 4.4E-37 314.1 16.4 242 815-1071 1-295 (364)
129 cd05109 PTKc_HER2 Catalytic do 100.0 6.8E-32 1.5E-36 297.8 19.9 245 814-1074 6-266 (279)
130 cd05575 STKc_SGK Catalytic dom 100.0 3.2E-32 7E-37 306.6 17.6 231 821-1067 1-242 (323)
131 cd05628 STKc_NDR1 Catalytic do 100.0 3.6E-32 7.8E-37 311.2 18.2 241 815-1071 1-292 (363)
132 cd05093 PTKc_TrkB Catalytic do 100.0 7.2E-32 1.6E-36 298.9 20.0 243 814-1074 4-277 (288)
133 cd05068 PTKc_Frk_like Catalyti 100.0 7.9E-32 1.7E-36 294.2 20.0 244 813-1074 4-259 (261)
134 KOG0596 Dual specificity; seri 100.0 1.6E-32 3.5E-37 296.5 14.3 245 812-1071 358-626 (677)
135 cd05620 STKc_nPKC_delta Cataly 100.0 5E-32 1.1E-36 303.7 18.8 234 821-1070 1-246 (316)
136 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 9.8E-32 2.1E-36 293.2 20.6 242 814-1074 5-258 (260)
137 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.1E-32 1.3E-36 310.3 19.9 247 813-1074 35-395 (400)
138 cd05619 STKc_nPKC_theta Cataly 100.0 5.5E-32 1.2E-36 303.2 18.9 234 821-1070 1-246 (316)
139 cd05596 STKc_ROCK Catalytic do 100.0 2.4E-32 5.2E-37 312.6 16.3 245 813-1071 41-303 (370)
140 cd05043 PTK_Ryk Pseudokinase d 100.0 4.8E-32 1E-36 299.2 18.2 246 813-1074 4-274 (280)
141 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.5E-32 9.8E-37 303.7 18.1 251 815-1071 6-285 (309)
142 cd05075 PTKc_Axl Catalytic dom 100.0 1.1E-31 2.4E-36 295.0 20.9 242 817-1074 1-269 (272)
143 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-31 2.7E-36 291.6 21.1 237 822-1074 2-253 (257)
144 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8.8E-32 1.9E-36 297.5 20.2 251 817-1074 6-279 (283)
145 cd07853 STKc_NLK Catalytic dom 100.0 3.4E-32 7.3E-37 312.7 17.5 252 816-1071 1-287 (372)
146 cd06619 PKc_MKK5 Catalytic dom 100.0 1.5E-31 3.3E-36 294.8 21.4 247 815-1072 1-253 (279)
147 cd07875 STKc_JNK1 Catalytic do 100.0 5.7E-32 1.2E-36 310.0 18.6 254 813-1071 22-317 (364)
148 cd08529 STKc_FA2-like Catalyti 100.0 1.3E-31 2.9E-36 291.5 20.6 242 816-1072 1-253 (256)
149 cd05621 STKc_ROCK2 Catalytic d 100.0 3.2E-32 7E-37 311.0 16.3 247 812-1072 40-304 (370)
150 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.4E-32 2E-36 303.0 19.8 238 821-1067 1-249 (327)
151 cd06650 PKc_MEK1 Catalytic dom 100.0 1.2E-31 2.6E-36 302.8 20.6 249 814-1071 4-298 (333)
152 PTZ00036 glycogen synthase kin 100.0 4.4E-32 9.6E-37 316.6 17.3 247 814-1071 65-350 (440)
153 cd05071 PTKc_Src Catalytic dom 100.0 1.5E-31 3.2E-36 291.9 20.4 242 814-1074 5-258 (262)
154 cd05052 PTKc_Abl Catalytic dom 100.0 1.4E-31 2.9E-36 292.6 20.1 242 815-1074 6-260 (263)
155 KOG0667 Dual-specificity tyros 100.0 3.2E-32 7E-37 304.3 15.3 186 816-1011 187-390 (586)
156 cd05051 PTKc_DDR Catalytic dom 100.0 1.8E-31 4E-36 297.2 21.4 251 814-1074 4-295 (296)
157 cd06637 STKc_TNIK Catalytic do 100.0 4.8E-32 1E-36 297.9 16.4 243 812-1071 3-268 (272)
158 cd05059 PTKc_Tec_like Catalyti 100.0 1.6E-31 3.5E-36 290.8 20.3 241 815-1074 4-256 (256)
159 PTZ00267 NIMA-related protein 100.0 9.6E-32 2.1E-36 317.6 20.0 238 816-1071 68-322 (478)
160 cd05629 STKc_NDR_like_fungal C 100.0 3.6E-32 7.8E-37 313.1 16.1 243 815-1072 1-305 (377)
161 PHA03211 serine/threonine kina 100.0 7.2E-32 1.6E-36 312.7 18.5 247 814-1072 168-455 (461)
162 cd05601 STKc_CRIK Catalytic do 100.0 2.2E-32 4.8E-37 309.2 13.9 240 815-1071 1-262 (330)
163 KOG0579 Ste20-like serine/thre 100.0 3.8E-33 8.3E-38 303.0 7.3 241 816-1071 33-288 (1187)
164 PTZ00284 protein kinase; Provi 100.0 5.8E-32 1.3E-36 319.6 17.9 253 809-1071 123-437 (467)
165 cd05614 STKc_MSK2_N N-terminal 100.0 8.9E-32 1.9E-36 304.5 18.6 244 816-1071 1-266 (332)
166 cd05045 PTKc_RET Catalytic dom 100.0 1.6E-31 3.6E-36 296.5 20.3 242 816-1074 1-284 (290)
167 cd05603 STKc_SGK2 Catalytic do 100.0 7E-32 1.5E-36 303.7 17.6 231 821-1067 1-242 (321)
168 cd05604 STKc_SGK3 Catalytic do 100.0 4.3E-32 9.3E-37 305.9 15.7 231 821-1067 1-242 (325)
169 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-31 2.7E-36 295.0 19.0 237 823-1071 1-249 (277)
170 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.5E-32 1.4E-36 307.1 17.2 254 811-1071 11-297 (343)
171 cd07863 STKc_CDK4 Catalytic do 100.0 1E-31 2.2E-36 298.0 18.1 251 816-1071 1-284 (288)
172 cd06646 STKc_MAP4K5 Catalytic 100.0 1.8E-31 3.9E-36 292.4 19.9 245 814-1073 8-266 (267)
173 cd08223 STKc_Nek4 Catalytic do 100.0 2.4E-31 5.2E-36 289.7 20.7 241 816-1071 1-253 (257)
174 cd05069 PTKc_Yes Catalytic dom 100.0 2.3E-31 5.1E-36 290.2 20.6 241 815-1074 6-258 (260)
175 KOG4279 Serine/threonine prote 100.0 1.4E-32 3.1E-37 301.7 10.9 235 821-1071 581-831 (1226)
176 cd05084 PTKc_Fes Catalytic dom 100.0 2E-31 4.4E-36 289.3 20.0 237 821-1074 1-251 (252)
177 cd05103 PTKc_VEGFR2 Catalytic 100.0 1E-31 2.2E-36 305.0 18.3 246 814-1074 6-337 (343)
178 cd05035 PTKc_Axl_like Catalyti 100.0 2.8E-31 6E-36 292.0 21.3 243 817-1074 1-270 (273)
179 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-31 3.1E-36 291.1 18.7 241 816-1072 1-252 (255)
180 cd05094 PTKc_TrkC Catalytic do 100.0 1.9E-31 4.1E-36 296.1 20.0 242 815-1074 5-280 (291)
181 cd05602 STKc_SGK1 Catalytic do 100.0 6.5E-32 1.4E-36 304.4 16.4 232 821-1068 1-243 (325)
182 cd06612 STKc_MST1_2 Catalytic 100.0 2.1E-31 4.6E-36 290.0 19.8 239 815-1071 3-252 (256)
183 cd05632 STKc_GRK5 Catalytic do 100.0 1.5E-31 3.2E-36 295.7 18.8 243 817-1071 2-260 (285)
184 cd05615 STKc_cPKC_alpha Cataly 100.0 1.3E-31 2.8E-36 301.4 18.4 235 816-1066 1-246 (323)
185 cd07867 STKc_CDC2L6 Catalytic 100.0 2E-31 4.4E-36 300.0 20.0 184 820-1011 6-218 (317)
186 cd06654 STKc_PAK1 Catalytic do 100.0 3.4E-31 7.4E-36 294.4 21.2 243 814-1072 19-270 (296)
187 cd05625 STKc_LATS1 Catalytic d 100.0 7.8E-32 1.7E-36 310.9 16.6 241 816-1071 2-304 (382)
188 cd07861 STKc_CDK1_euk Catalyti 100.0 1.5E-31 3.2E-36 296.2 18.2 251 816-1071 1-281 (285)
189 cd05092 PTKc_TrkA Catalytic do 100.0 2.2E-31 4.7E-36 293.7 19.3 242 814-1074 4-279 (280)
190 cd06625 STKc_MEKK3_like Cataly 100.0 2.9E-31 6.3E-36 290.1 20.1 244 815-1072 2-260 (263)
191 cd06643 STKc_SLK Catalytic dom 100.0 4.1E-31 8.9E-36 292.0 21.4 240 817-1071 7-261 (282)
192 cd05095 PTKc_DDR2 Catalytic do 100.0 4.1E-31 8.8E-36 294.2 21.5 250 814-1074 4-295 (296)
193 PHA02882 putative serine/threo 100.0 2E-31 4.3E-36 295.9 18.9 253 814-1074 11-294 (294)
194 cd05032 PTKc_InsR_like Catalyt 100.0 4E-31 8.7E-36 291.4 21.2 243 814-1074 5-276 (277)
195 cd05060 PTKc_Syk_like Catalyti 100.0 4E-31 8.7E-36 287.9 20.7 238 821-1074 1-253 (257)
196 cd05622 STKc_ROCK1 Catalytic d 100.0 9.8E-32 2.1E-36 307.5 16.6 251 808-1072 36-304 (371)
197 cd05097 PTKc_DDR_like Catalyti 100.0 3.8E-31 8.3E-36 294.2 20.9 250 814-1074 4-294 (295)
198 PF00069 Pkinase: Protein kina 100.0 3E-32 6.5E-37 297.3 11.7 246 817-1071 1-256 (260)
199 KOG4717 Serine/threonine prote 100.0 7.2E-32 1.6E-36 287.3 14.1 239 815-1071 18-269 (864)
200 cd05598 STKc_LATS Catalytic do 100.0 5.5E-32 1.2E-36 311.6 14.4 243 816-1071 2-300 (376)
201 cd05085 PTKc_Fer Catalytic dom 100.0 6.2E-31 1.3E-35 285.1 21.8 237 821-1074 1-249 (250)
202 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.3E-31 7.1E-36 293.2 19.8 252 815-1074 4-281 (284)
203 PHA03207 serine/threonine kina 100.0 2.6E-31 5.7E-36 306.8 19.8 247 814-1071 91-374 (392)
204 cd05110 PTKc_HER4 Catalytic do 100.0 6E-31 1.3E-35 293.7 21.7 245 814-1074 6-266 (303)
205 cd05053 PTKc_FGFR Catalytic do 100.0 2.2E-31 4.8E-36 296.0 18.2 246 811-1074 8-289 (293)
206 cd06655 STKc_PAK2 Catalytic do 100.0 4.6E-31 1E-35 293.2 20.6 242 815-1071 19-268 (296)
207 cd05050 PTKc_Musk Catalytic do 100.0 3.7E-31 7.9E-36 293.4 19.8 245 814-1074 4-287 (288)
208 PHA03209 serine/threonine kina 100.0 1.3E-31 2.9E-36 305.3 16.6 185 812-1009 63-256 (357)
209 cd05082 PTKc_Csk Catalytic dom 100.0 4.8E-31 1.1E-35 287.0 20.1 238 814-1074 5-254 (256)
210 cd06644 STKc_STK10_LOK Catalyt 100.0 1.1E-30 2.4E-35 290.2 23.1 241 815-1071 12-268 (292)
211 cd05630 STKc_GRK6 Catalytic do 100.0 2.7E-31 5.8E-36 293.5 17.9 244 816-1071 1-260 (285)
212 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.7E-31 8.1E-36 303.5 19.5 245 812-1074 34-397 (401)
213 cd05089 PTKc_Tie1 Catalytic do 100.0 4.7E-31 1E-35 293.7 19.8 241 815-1074 2-273 (297)
214 KOG1035 eIF-2alpha kinase GCN2 100.0 1.1E-31 2.5E-36 314.6 15.3 244 813-1071 477-870 (1351)
215 cd06624 STKc_ASK Catalytic dom 100.0 6.3E-31 1.4E-35 288.3 20.2 246 810-1071 3-264 (268)
216 KOG0584 Serine/threonine prote 100.0 4.3E-32 9.4E-37 299.7 10.8 238 818-1071 43-295 (632)
217 cd05066 PTKc_EphR_A Catalytic 100.0 6.7E-31 1.5E-35 287.8 20.3 242 815-1074 4-264 (267)
218 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.3E-31 9.2E-36 291.0 18.7 244 813-1074 4-276 (277)
219 cd05061 PTKc_InsR Catalytic do 100.0 4.9E-31 1.1E-35 292.2 19.3 246 812-1074 3-276 (288)
220 cd08217 STKc_Nek2 Catalytic do 100.0 7.5E-31 1.6E-35 287.1 20.5 242 816-1072 1-262 (265)
221 cd05058 PTKc_Met_Ron Catalytic 100.0 9.7E-31 2.1E-35 285.8 21.3 238 821-1074 1-257 (262)
222 PTZ00266 NIMA-related protein 100.0 1.2E-31 2.6E-36 323.5 15.3 246 812-1071 10-294 (1021)
223 cd06609 STKc_MST3_like Catalyt 100.0 4.4E-31 9.6E-36 290.5 18.5 241 815-1071 1-250 (274)
224 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.2E-31 9.1E-36 294.8 18.4 251 815-1071 6-285 (301)
225 cd06616 PKc_MKK4 Catalytic dom 100.0 4.6E-31 1E-35 292.7 18.5 244 816-1071 5-266 (288)
226 cd05088 PTKc_Tie2 Catalytic do 100.0 3.4E-31 7.4E-36 295.5 17.5 242 814-1074 6-278 (303)
227 cd06651 STKc_MEKK3 Catalytic d 100.0 7.1E-31 1.5E-35 287.5 19.7 243 815-1071 2-260 (266)
228 cd06628 STKc_MAPKKK_Byr2_like 100.0 8E-31 1.7E-35 287.3 20.1 241 816-1071 1-263 (267)
229 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.3E-30 2.8E-35 284.4 21.4 230 821-1074 1-262 (262)
230 cd08218 STKc_Nek1 Catalytic do 100.0 6E-31 1.3E-35 286.3 18.8 241 816-1071 1-252 (256)
231 cd05039 PTKc_Csk_like Catalyti 100.0 1E-30 2.2E-35 284.5 20.6 238 814-1074 5-254 (256)
232 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.8E-31 1.5E-35 293.6 19.7 245 812-1074 12-294 (304)
233 cd06613 STKc_MAP4K3_like Catal 100.0 1.2E-30 2.6E-35 285.0 21.2 242 815-1071 3-259 (262)
234 cd05055 PTKc_PDGFR Catalytic d 100.0 5.9E-31 1.3E-35 293.3 19.1 246 813-1074 33-299 (302)
235 cd06656 STKc_PAK3 Catalytic do 100.0 6.5E-31 1.4E-35 292.3 19.2 242 814-1071 18-268 (297)
236 cd08221 STKc_Nek9 Catalytic do 100.0 1.2E-30 2.7E-35 283.9 20.8 243 816-1073 1-254 (256)
237 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 9.7E-31 2.1E-35 289.3 20.2 251 815-1074 4-281 (284)
238 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-30 2.7E-35 285.9 20.6 244 814-1074 4-265 (268)
239 cd06638 STKc_myosinIIIA Cataly 100.0 8.1E-31 1.8E-35 290.4 19.3 252 806-1073 9-284 (286)
240 cd06639 STKc_myosinIIIB Cataly 100.0 9.5E-31 2.1E-35 290.6 19.8 249 807-1071 14-286 (291)
241 cd07847 STKc_CDKL1_4 Catalytic 100.0 6.8E-31 1.5E-35 291.1 18.5 252 815-1071 1-282 (286)
242 cd06645 STKc_MAP4K3 Catalytic 100.0 6E-31 1.3E-35 288.3 17.9 243 815-1071 9-264 (267)
243 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.7E-31 1.7E-35 293.5 19.1 244 814-1074 17-297 (307)
244 cd07839 STKc_CDK5 Catalytic do 100.0 4.3E-31 9.2E-36 292.3 16.8 252 816-1071 1-280 (284)
245 cd05073 PTKc_Hck Catalytic dom 100.0 1.3E-30 2.8E-35 284.4 20.2 243 814-1074 5-258 (260)
246 cd00192 PTKc Catalytic domain 100.0 1.2E-30 2.6E-35 285.0 20.0 236 821-1074 1-262 (262)
247 cd06607 STKc_TAO Catalytic dom 100.0 2.5E-30 5.4E-35 289.4 23.0 241 815-1072 15-267 (307)
248 cd05057 PTKc_EGFR_like Catalyt 100.0 2.6E-30 5.7E-35 285.1 22.8 244 814-1074 6-266 (279)
249 cd05040 PTKc_Ack_like Catalyti 100.0 8.3E-31 1.8E-35 285.4 18.5 239 821-1074 1-256 (257)
250 cd05099 PTKc_FGFR4 Catalytic d 100.0 1E-30 2.3E-35 293.3 19.8 243 814-1074 11-291 (314)
251 cd05034 PTKc_Src_like Catalyti 100.0 2.2E-30 4.7E-35 282.8 21.7 242 813-1074 4-259 (261)
252 cd05627 STKc_NDR2 Catalytic do 100.0 2.3E-31 4.9E-36 304.4 14.5 242 815-1071 1-292 (360)
253 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.9E-30 4.1E-35 284.6 21.2 241 821-1074 1-268 (269)
254 cd05112 PTKc_Itk Catalytic dom 100.0 2E-30 4.4E-35 282.2 21.2 240 815-1074 4-256 (256)
255 cd06631 STKc_YSK4 Catalytic do 100.0 2.8E-30 6.1E-35 282.6 22.2 243 816-1071 1-261 (265)
256 cd07860 STKc_CDK2_3 Catalytic 100.0 5.7E-31 1.2E-35 291.3 16.8 252 816-1071 1-280 (284)
257 cd05586 STKc_Sck1_like Catalyt 100.0 2.5E-31 5.5E-36 300.4 14.2 234 823-1071 1-252 (330)
258 cd05056 PTKc_FAK Catalytic dom 100.0 2.9E-30 6.3E-35 283.3 22.1 244 814-1074 5-263 (270)
259 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.9E-31 1.7E-35 289.8 17.8 249 806-1071 7-278 (282)
260 cd06640 STKc_MST4 Catalytic do 100.0 2E-30 4.4E-35 285.6 20.9 241 815-1072 4-253 (277)
261 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2E-30 4.4E-35 287.9 20.9 253 813-1071 3-287 (291)
262 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.1E-30 4.7E-35 287.0 21.0 250 815-1071 1-265 (287)
263 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 7.5E-31 1.6E-35 290.2 17.2 249 815-1072 5-266 (284)
264 cd06615 PKc_MEK Catalytic doma 100.0 3.1E-30 6.6E-35 288.5 22.3 249 815-1072 1-287 (308)
265 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.4E-31 1.2E-35 290.3 15.8 239 816-1071 5-252 (277)
266 cd06611 STKc_SLK_like Catalyti 100.0 1.8E-30 3.8E-35 286.7 19.9 242 814-1071 4-261 (280)
267 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.9E-30 4.1E-35 285.4 20.0 242 817-1074 1-270 (273)
268 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.5E-30 5.5E-35 286.2 21.1 251 815-1074 4-281 (284)
269 cd05041 PTKc_Fes_like Catalyti 100.0 2.7E-30 5.8E-35 280.3 20.7 238 821-1074 1-250 (251)
270 cd05065 PTKc_EphR_B Catalytic 100.0 2.8E-30 6.1E-35 283.3 21.0 243 815-1074 4-266 (269)
271 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-30 2.3E-35 289.7 17.7 240 817-1072 24-272 (292)
272 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-30 3E-35 294.0 19.0 249 819-1071 2-306 (327)
273 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.9E-30 6.4E-35 282.8 21.0 246 815-1071 1-263 (267)
274 cd05083 PTKc_Chk Catalytic dom 100.0 1.4E-30 3E-35 283.0 18.0 237 815-1074 6-252 (254)
275 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.3E-31 1.6E-35 290.8 15.9 252 815-1071 1-282 (286)
276 cd06659 STKc_PAK6 Catalytic do 100.0 8.7E-31 1.9E-35 291.2 16.2 237 819-1071 25-270 (297)
277 cd06608 STKc_myosinIII_like Ca 100.0 1.9E-30 4.1E-35 285.7 18.8 244 812-1071 3-271 (275)
278 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.9E-30 4.2E-35 293.8 19.2 243 814-1074 11-291 (334)
279 KOG0610 Putative serine/threon 100.0 1.3E-30 2.8E-35 273.8 16.2 244 815-1071 77-391 (459)
280 cd05042 PTKc_Aatyk Catalytic d 100.0 2.3E-30 5.1E-35 283.9 19.1 240 822-1074 2-268 (269)
281 cd05597 STKc_DMPK_like Catalyt 100.0 1.4E-30 3.1E-35 294.0 17.9 244 815-1071 1-265 (331)
282 cd08528 STKc_Nek10 Catalytic d 100.0 3E-30 6.5E-35 283.1 19.8 246 816-1074 1-268 (269)
283 KOG0690 Serine/threonine prote 100.0 2.3E-31 5E-36 268.7 9.9 237 813-1064 166-411 (516)
284 cd05574 STKc_phototropin_like 100.0 2.9E-30 6.2E-35 290.3 19.9 244 815-1071 1-288 (316)
285 cd06605 PKc_MAPKK Catalytic do 100.0 1.4E-30 3E-35 285.1 16.7 244 815-1071 1-256 (265)
286 cd06652 STKc_MEKK2 Catalytic d 100.0 5.8E-30 1.3E-34 280.1 21.5 244 815-1072 2-261 (265)
287 cd07844 STKc_PCTAIRE_like Cata 100.0 2.1E-30 4.6E-35 287.8 18.1 251 815-1071 5-287 (291)
288 cd05580 STKc_PKA Catalytic dom 100.0 3.7E-30 8.1E-35 285.5 20.0 238 815-1071 1-253 (290)
289 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3E-30 6.5E-35 285.8 19.0 243 815-1071 1-261 (286)
290 cd06626 STKc_MEKK4 Catalytic d 100.0 8E-30 1.7E-34 278.9 22.1 243 816-1071 1-260 (264)
291 cd07843 STKc_CDC2L1 Catalytic 100.0 2E-30 4.4E-35 288.3 17.6 253 815-1071 5-289 (293)
292 cd07841 STKc_CDK7 Catalytic do 100.0 2.3E-30 5.1E-35 288.5 18.1 253 816-1072 1-282 (298)
293 PHA03210 serine/threonine kina 100.0 9.6E-31 2.1E-35 309.9 15.9 256 813-1071 146-453 (501)
294 cd06635 STKc_TAO1 Catalytic do 100.0 8.7E-30 1.9E-34 286.1 22.6 240 816-1072 26-277 (317)
295 cd07845 STKc_CDK10 Catalytic d 100.0 1.9E-30 4.1E-35 290.7 17.2 254 814-1071 6-289 (309)
296 cd07835 STKc_CDK1_like Catalyt 100.0 2.2E-30 4.7E-35 286.5 17.1 251 817-1071 1-279 (283)
297 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.6E-30 1.2E-34 281.2 19.8 230 822-1074 2-274 (274)
298 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.5E-30 1.2E-34 283.3 19.9 243 815-1071 1-260 (283)
299 KOG0986 G protein-coupled rece 100.0 3.5E-31 7.5E-36 279.5 9.6 241 813-1065 183-434 (591)
300 cd06917 STKc_NAK1_like Catalyt 100.0 4.8E-30 1E-34 282.8 19.2 241 816-1072 2-255 (277)
301 cd06648 STKc_PAK_II Catalytic 100.0 1.1E-29 2.3E-34 280.9 21.9 241 816-1071 20-268 (285)
302 cd06647 STKc_PAK_I Catalytic d 100.0 5.4E-30 1.2E-34 284.4 19.5 243 814-1072 18-269 (293)
303 cd05624 STKc_MRCK_beta Catalyt 100.0 2.4E-30 5.3E-35 292.1 16.8 244 815-1071 1-265 (331)
304 KOG1006 Mitogen-activated prot 100.0 2.4E-32 5.2E-37 269.4 0.4 242 819-1072 68-327 (361)
305 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.6E-30 1.2E-34 281.4 19.3 247 816-1072 2-269 (272)
306 cd05047 PTKc_Tie Catalytic dom 100.0 7.5E-30 1.6E-34 280.0 20.2 235 821-1074 1-266 (270)
307 cd06641 STKc_MST3 Catalytic do 100.0 8.9E-30 1.9E-34 280.5 20.9 240 815-1071 4-252 (277)
308 smart00219 TyrKc Tyrosine kina 100.0 1.2E-29 2.5E-34 276.5 21.5 241 817-1073 1-258 (258)
309 cd05623 STKc_MRCK_alpha Cataly 100.0 3E-30 6.6E-35 291.6 17.5 244 815-1071 1-265 (332)
310 cd07833 STKc_CDKL Catalytic do 100.0 2.8E-30 6.2E-35 286.4 16.8 253 815-1072 1-285 (288)
311 cd05046 PTK_CCK4 Pseudokinase 100.0 6.4E-30 1.4E-34 281.5 19.5 245 815-1074 5-274 (275)
312 cd06623 PKc_MAPKK_plant_like C 100.0 8.8E-30 1.9E-34 278.6 20.3 245 815-1072 1-256 (264)
313 cd05609 STKc_MAST Catalytic do 100.0 5.1E-30 1.1E-34 286.6 18.8 247 815-1073 1-271 (305)
314 cd05044 PTKc_c-ros Catalytic d 100.0 4.6E-30 1E-34 281.6 18.0 236 821-1074 1-268 (269)
315 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6.6E-30 1.4E-34 278.7 19.1 230 821-1074 1-259 (259)
316 cd06632 STKc_MEKK1_plant Catal 100.0 6.3E-30 1.4E-34 278.7 18.8 241 816-1071 1-254 (258)
317 cd07850 STKc_JNK Catalytic dom 100.0 8.9E-30 1.9E-34 290.6 20.7 254 813-1071 14-310 (353)
318 cd07849 STKc_ERK1_2_like Catal 100.0 2E-30 4.4E-35 293.9 15.3 254 814-1072 4-292 (336)
319 cd06630 STKc_MEKK1 Catalytic d 100.0 1E-29 2.2E-34 278.8 20.2 246 816-1071 1-263 (268)
320 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.9E-30 1.7E-34 279.4 19.3 240 822-1074 2-267 (268)
321 cd07837 STKc_CdkB_plant Cataly 100.0 4.9E-30 1.1E-34 285.5 18.0 253 815-1071 1-290 (295)
322 cd08220 STKc_Nek8 Catalytic do 100.0 8.3E-30 1.8E-34 277.4 19.0 239 816-1071 1-252 (256)
323 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.3E-30 9.2E-35 279.8 16.6 230 821-1074 1-258 (258)
324 KOG0607 MAP kinase-interacting 100.0 2.3E-30 4.9E-35 261.4 13.2 254 807-1071 75-360 (463)
325 cd07852 STKc_MAPK15 Catalytic 100.0 4.7E-30 1E-34 291.2 17.3 256 813-1072 5-295 (337)
326 cd06618 PKc_MKK7 Catalytic dom 100.0 1E-29 2.2E-34 282.9 19.7 246 813-1072 13-273 (296)
327 cd08225 STKc_Nek5 Catalytic do 100.0 4.8E-30 1E-34 279.4 16.6 242 816-1072 1-254 (257)
328 cd06614 STKc_PAK Catalytic dom 100.0 1.3E-29 2.8E-34 280.7 19.8 243 813-1072 17-270 (286)
329 PLN00009 cyclin-dependent kina 100.0 6.1E-30 1.3E-34 284.5 17.2 252 815-1071 2-283 (294)
330 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.6E-30 9.9E-35 291.0 16.3 255 814-1072 4-291 (337)
331 cd07842 STKc_CDK8_like Catalyt 100.0 6.7E-30 1.5E-34 287.6 17.5 252 816-1071 1-312 (316)
332 KOG4645 MAPKKK (MAP kinase kin 100.0 4.3E-31 9.3E-36 311.2 7.9 244 814-1071 1234-1493(1509)
333 cd05122 PKc_STE Catalytic doma 100.0 4.2E-29 9E-34 271.0 22.5 240 816-1071 1-250 (253)
334 cd06633 STKc_TAO3 Catalytic do 100.0 1.9E-29 4.1E-34 282.7 20.4 238 817-1071 23-272 (313)
335 cd07864 STKc_CDK12 Catalytic d 100.0 1.7E-29 3.7E-34 282.2 19.7 256 812-1071 4-298 (302)
336 cd07879 STKc_p38delta_MAPK13 C 100.0 6.5E-30 1.4E-34 290.2 16.5 251 814-1071 14-296 (342)
337 cd05578 STKc_Yank1 Catalytic d 100.0 8.3E-30 1.8E-34 277.7 16.6 243 816-1071 1-254 (258)
338 cd07836 STKc_Pho85 Catalytic d 100.0 8E-30 1.7E-34 282.2 16.3 251 816-1071 1-280 (284)
339 cd07838 STKc_CDK4_6_like Catal 100.0 3.1E-29 6.7E-34 277.9 21.0 246 817-1071 1-283 (287)
340 cd06634 STKc_TAO2 Catalytic do 100.0 1.4E-29 3E-34 283.3 18.1 241 815-1072 15-267 (308)
341 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.5E-29 3.2E-34 287.5 18.6 258 807-1071 9-299 (345)
342 cd07832 STKc_CCRK Catalytic do 100.0 1.5E-29 3.2E-34 280.3 17.9 251 816-1071 1-281 (286)
343 cd07855 STKc_ERK5 Catalytic do 100.0 8.7E-30 1.9E-34 288.4 16.2 254 814-1071 4-293 (334)
344 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.7E-29 5.9E-34 274.6 19.1 244 815-1072 2-261 (264)
345 cd06657 STKc_PAK4 Catalytic do 100.0 1.7E-29 3.8E-34 279.9 17.6 236 821-1071 26-269 (292)
346 cd05577 STKc_GRK Catalytic dom 100.0 1.9E-29 4.1E-34 277.9 17.7 236 823-1071 1-253 (277)
347 cd05572 STKc_cGK_PKG Catalytic 100.0 5E-29 1.1E-33 272.2 20.9 234 823-1071 1-251 (262)
348 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.8E-29 3.8E-34 284.5 17.7 255 811-1072 6-288 (328)
349 cd07865 STKc_CDK9 Catalytic do 100.0 2.7E-29 5.9E-34 281.8 19.0 254 814-1071 11-306 (310)
350 KOG0200 Fibroblast/platelet-de 100.0 1.3E-29 2.7E-34 304.4 17.2 247 811-1074 292-577 (609)
351 cd07840 STKc_CDK9_like Catalyt 100.0 3.4E-29 7.3E-34 277.6 19.2 252 817-1072 1-284 (287)
352 cd06627 STKc_Cdc7_like Catalyt 100.0 3.9E-29 8.5E-34 271.7 18.9 240 816-1071 1-250 (254)
353 cd07831 STKc_MOK Catalytic dom 100.0 2.9E-29 6.2E-34 277.4 18.1 248 817-1071 1-278 (282)
354 cd08215 STKc_Nek Catalytic dom 100.0 5.4E-29 1.2E-33 271.2 20.0 240 816-1071 1-254 (258)
355 cd07866 STKc_BUR1 Catalytic do 100.0 1.1E-29 2.4E-34 285.1 14.7 254 814-1071 7-307 (311)
356 cd05611 STKc_Rim15_like Cataly 100.0 3.3E-29 7.2E-34 273.3 17.9 237 821-1073 2-249 (260)
357 cd06606 STKc_MAPKKK Catalytic 100.0 1E-28 2.2E-33 269.2 21.5 242 816-1071 1-256 (260)
358 cd08530 STKc_CNK2-like Catalyt 100.0 4E-29 8.6E-34 272.0 18.1 239 816-1072 1-253 (256)
359 cd05633 STKc_GRK3 Catalytic do 100.0 3.8E-29 8.3E-34 275.4 18.1 236 822-1072 1-255 (279)
360 KOG0666 Cyclin C-dependent kin 100.0 3.7E-30 8E-35 259.1 8.9 195 813-1011 22-242 (438)
361 cd05118 STKc_CMGC Catalytic do 100.0 4.5E-29 9.8E-34 276.0 18.5 251 817-1071 1-279 (283)
362 cd07834 STKc_MAPK Catalytic do 100.0 2E-29 4.4E-34 285.3 16.0 252 816-1071 1-288 (330)
363 cd05579 STKc_MAST_like Catalyt 100.0 2.7E-29 5.9E-34 274.8 16.5 237 823-1073 1-255 (265)
364 KOG4236 Serine/threonine prote 100.0 3.4E-30 7.3E-35 275.2 8.8 236 820-1070 569-817 (888)
365 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.4E-29 9.6E-34 283.3 17.4 255 810-1071 10-297 (343)
366 KOG0604 MAP kinase-activated p 100.0 1.4E-29 3E-34 254.1 11.1 243 813-1071 59-321 (400)
367 KOG0586 Serine/threonine prote 100.0 2.2E-29 4.8E-34 278.3 13.4 242 813-1071 54-305 (596)
368 cd07857 STKc_MPK1 Catalytic do 100.0 8E-29 1.7E-33 280.3 17.6 252 816-1071 1-291 (332)
369 cd05581 STKc_PDK1 Catalytic do 100.0 6.7E-29 1.4E-33 274.2 16.5 241 815-1071 1-276 (280)
370 PTZ00024 cyclin-dependent prot 100.0 7.2E-29 1.6E-33 281.3 17.0 252 815-1071 8-312 (335)
371 cd08216 PK_STRAD Pseudokinase 100.0 1.3E-28 2.7E-33 276.8 17.8 248 820-1072 7-295 (314)
372 cd08226 PK_STRAD_beta Pseudoki 100.0 2.7E-28 5.9E-33 275.4 20.4 245 821-1071 4-307 (328)
373 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-28 2.3E-33 272.9 16.3 250 817-1071 1-278 (282)
374 cd05606 STKc_beta_ARK Catalyti 100.0 4.3E-28 9.3E-33 267.0 21.0 235 822-1071 1-254 (278)
375 cd07854 STKc_MAPK4_6 Catalytic 100.0 6.7E-29 1.5E-33 281.9 15.1 251 814-1071 4-299 (342)
376 cd05583 STKc_MSK_N N-terminal 100.0 2E-28 4.3E-33 271.5 17.8 247 816-1074 1-265 (288)
377 cd08222 STKc_Nek11 Catalytic d 100.0 1.5E-28 3.3E-33 268.1 16.6 241 816-1071 1-256 (260)
378 cd05123 STKc_AGC Catalytic dom 100.0 4E-28 8.7E-33 263.1 18.8 234 823-1071 1-246 (250)
379 KOG0695 Serine/threonine prote 100.0 6.5E-29 1.4E-33 251.6 11.6 245 814-1065 249-503 (593)
380 KOG1151 Tousled-like protein k 100.0 2.8E-29 6.2E-34 262.9 9.0 252 813-1071 461-740 (775)
381 KOG0662 Cyclin-dependent kinas 100.0 8.9E-29 1.9E-33 229.6 10.8 250 816-1071 3-282 (292)
382 cd07830 STKc_MAK_like Catalyti 100.0 5.6E-28 1.2E-32 267.3 19.3 250 817-1072 1-280 (283)
383 cd07851 STKc_p38 Catalytic dom 100.0 9.1E-29 2E-33 280.9 13.3 252 813-1071 13-297 (343)
384 cd05613 STKc_MSK1_N N-terminal 100.0 3.4E-28 7.3E-33 270.0 17.5 244 816-1071 1-267 (290)
385 KOG4250 TANK binding protein k 100.0 9.1E-29 2E-33 276.8 11.8 241 818-1064 16-296 (732)
386 KOG0696 Serine/threonine prote 100.0 2.7E-29 6E-34 261.1 7.0 237 813-1065 347-594 (683)
387 PHA03390 pk1 serine/threonine- 100.0 1.4E-27 3E-32 261.2 19.6 240 808-1071 7-261 (267)
388 KOG0603 Ribosomal protein S6 k 100.0 2.9E-28 6.4E-33 271.0 13.5 231 814-1071 321-562 (612)
389 cd05610 STKc_MASTL Catalytic d 100.0 1.1E-27 2.3E-32 292.7 19.4 140 814-957 3-152 (669)
390 KOG0669 Cyclin T-dependent kin 100.0 1.2E-29 2.6E-34 248.1 0.9 254 814-1071 16-314 (376)
391 KOG0614 cGMP-dependent protein 99.9 6.8E-29 1.5E-33 264.9 6.0 236 815-1065 420-665 (732)
392 KOG0984 Mitogen-activated prot 99.9 4.4E-28 9.5E-33 230.8 8.4 195 811-1010 42-253 (282)
393 KOG0587 Traf2- and Nck-interac 99.9 3.6E-27 7.8E-32 268.8 16.0 249 807-1072 11-282 (953)
394 KOG4237 Extracellular matrix p 99.9 3.4E-29 7.4E-34 260.5 -0.9 403 98-515 68-498 (498)
395 KOG0671 LAMMER dual specificit 99.9 3.4E-28 7.5E-33 253.3 5.7 257 805-1071 79-405 (415)
396 KOG4237 Extracellular matrix p 99.9 1.1E-28 2.5E-33 256.6 0.6 421 174-629 51-498 (498)
397 KOG0664 Nemo-like MAPK-related 99.9 6.4E-28 1.4E-32 238.3 5.8 252 817-1072 55-343 (449)
398 KOG0612 Rho-associated, coiled 99.9 1.9E-27 4.2E-32 277.0 7.9 247 809-1070 69-336 (1317)
399 cd05576 STKc_RPK118_like Catal 99.9 2.3E-26 5.1E-31 246.7 15.3 210 826-1066 4-223 (237)
400 PLN03225 Serine/threonine-prot 99.9 3.2E-26 7E-31 272.2 17.8 253 813-1071 130-449 (566)
401 smart00220 S_TKc Serine/Threon 99.9 7.1E-26 1.5E-30 244.0 17.1 231 827-1071 1-240 (244)
402 KOG1027 Serine/threonine prote 99.9 5.6E-27 1.2E-31 266.0 8.2 233 817-1071 511-766 (903)
403 KOG1290 Serine/threonine prote 99.9 2E-25 4.3E-30 238.6 15.2 124 814-943 77-222 (590)
404 PLN03224 probable serine/threo 99.9 4.3E-25 9.2E-30 255.2 18.0 254 813-1071 143-499 (507)
405 KOG0668 Casein kinase II, alph 99.9 1.1E-25 2.3E-30 217.5 8.9 249 813-1071 36-321 (338)
406 KOG0608 Warts/lats-like serine 99.9 2.1E-25 4.6E-30 243.6 10.2 204 807-1014 618-876 (1034)
407 KOG0665 Jun-N-terminal kinase 99.9 4.3E-25 9.3E-30 224.8 11.3 251 815-1071 17-309 (369)
408 PLN03210 Resistant to P. syrin 99.9 8.5E-24 1.8E-28 273.1 24.7 363 49-444 533-904 (1153)
409 KOG1152 Signal transduction se 99.9 2.5E-25 5.5E-30 241.6 6.5 195 811-1010 557-770 (772)
410 PLN03210 Resistant to P. syrin 99.9 1.3E-23 2.9E-28 271.2 22.5 306 219-539 591-903 (1153)
411 KOG0670 U4/U6-associated splic 99.9 3.4E-25 7.3E-30 237.5 5.0 263 800-1071 417-745 (752)
412 KOG1345 Serine/threonine kinas 99.9 8.7E-25 1.9E-29 216.7 5.5 246 813-1072 22-284 (378)
413 cd00180 PKc Catalytic domain o 99.9 6.5E-23 1.4E-27 215.5 19.5 202 823-1073 1-215 (215)
414 KOG0576 Mitogen-activated prot 99.9 2.3E-24 5.1E-29 238.2 5.2 244 814-1071 14-270 (829)
415 PRK15387 E3 ubiquitin-protein 99.9 4.1E-23 9E-28 246.2 13.8 266 362-689 202-467 (788)
416 PRK15387 E3 ubiquitin-protein 99.9 2.8E-22 6.2E-27 239.1 14.9 224 241-501 242-465 (788)
417 smart00750 KIND kinase non-cat 99.9 2.7E-22 5.8E-27 204.5 12.5 155 900-1074 11-167 (176)
418 smart00221 STYKc Protein kinas 99.9 1.1E-21 2.5E-26 208.6 16.7 189 817-1010 1-201 (225)
419 KOG1167 Serine/threonine prote 99.9 1.3E-22 2.9E-27 215.1 7.9 194 808-1010 29-279 (418)
420 PLN00181 protein SPA1-RELATED; 99.9 2.5E-22 5.5E-27 252.2 9.0 156 900-1071 74-264 (793)
421 PRK15370 E3 ubiquitin-protein 99.8 1.2E-20 2.5E-25 227.3 15.3 280 98-415 179-463 (754)
422 PRK15370 E3 ubiquitin-protein 99.8 1.2E-20 2.5E-25 227.3 9.8 246 194-494 179-428 (754)
423 KOG1165 Casein kinase (serine/ 99.8 3.8E-19 8.3E-24 181.9 16.6 246 814-1072 27-295 (449)
424 PRK09188 serine/threonine prot 99.8 1.3E-19 2.8E-24 200.9 13.8 165 811-984 14-195 (365)
425 KOG1164 Casein kinase (serine/ 99.8 1.1E-18 2.4E-23 195.2 16.2 245 816-1073 19-294 (322)
426 KOG0195 Integrin-linked kinase 99.8 4.1E-20 8.8E-25 183.2 4.0 238 819-1074 194-444 (448)
427 KOG1163 Casein kinase (serine/ 99.8 3.7E-19 7.9E-24 174.1 8.0 249 813-1074 13-282 (341)
428 KOG1240 Protein kinase contain 99.8 4.2E-19 9E-24 207.2 8.6 238 816-1072 24-291 (1431)
429 KOG0590 Checkpoint kinase and 99.8 3.7E-19 8.1E-24 210.6 6.3 247 818-1071 321-584 (601)
430 PF14531 Kinase-like: Kinase-l 99.8 2.9E-18 6.3E-23 181.4 10.7 225 817-1063 14-288 (288)
431 COG0515 SPS1 Serine/threonine 99.7 3.6E-17 7.8E-22 185.7 20.2 249 817-1071 2-274 (384)
432 KOG0617 Ras suppressor protein 99.7 2.8E-20 6.2E-25 172.2 -4.7 177 336-518 32-212 (264)
433 cd00116 LRR_RI Leucine-rich re 99.7 9E-20 2E-24 205.4 -2.8 113 591-703 189-319 (319)
434 cd00116 LRR_RI Leucine-rich re 99.7 1.3E-19 2.9E-24 204.0 -3.3 260 382-679 20-319 (319)
435 KOG0617 Ras suppressor protein 99.7 1.4E-19 3.1E-24 167.6 -2.8 155 358-517 30-185 (264)
436 KOG4158 BRPK/PTEN-induced prot 99.7 2.8E-17 6.2E-22 171.9 8.1 158 902-1072 337-510 (598)
437 KOG0603 Ribosomal protein S6 k 99.7 1.2E-17 2.5E-22 186.9 4.7 218 822-1066 1-232 (612)
438 PRK12274 serine/threonine prot 99.7 1.7E-16 3.7E-21 159.0 11.6 185 818-1010 5-208 (218)
439 PRK10359 lipopolysaccharide co 99.7 3.6E-17 7.7E-22 168.1 6.4 180 806-1003 20-216 (232)
440 cd05147 RIO1_euk RIO kinase fa 99.7 1.5E-16 3.4E-21 162.4 9.6 136 820-960 2-168 (190)
441 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.4E-17 7.4E-22 179.8 4.8 142 909-1070 362-510 (516)
442 cd05145 RIO1_like RIO kinase f 99.6 8.6E-16 1.9E-20 157.8 12.5 137 820-961 2-169 (190)
443 KOG1023 Natriuretic peptide re 99.6 5.6E-16 1.2E-20 174.4 10.3 200 868-1074 1-222 (484)
444 KOG0606 Microtubule-associated 99.6 4.8E-16 1E-20 182.2 7.1 207 814-1064 82-304 (1205)
445 KOG1166 Mitotic checkpoint ser 99.6 3.3E-15 7.1E-20 179.7 8.8 240 809-1074 692-951 (974)
446 PLN03150 hypothetical protein; 99.6 9.4E-15 2E-19 176.4 11.7 148 2-155 372-525 (623)
447 PRK10345 hypothetical protein; 99.5 7.2E-14 1.6E-18 143.8 12.0 131 817-957 4-157 (210)
448 smart00090 RIO RIO-like kinase 99.5 4.9E-14 1.1E-18 149.0 10.9 140 814-960 27-199 (237)
449 cd05144 RIO2_C RIO kinase fami 99.5 5.2E-14 1.1E-18 146.0 10.9 147 808-960 8-176 (198)
450 PLN03150 hypothetical protein; 99.5 5.6E-14 1.2E-18 169.7 10.9 120 596-739 419-539 (623)
451 cd05119 RIO RIO kinase family, 99.4 9.5E-13 2.1E-17 135.4 9.5 135 820-961 2-166 (187)
452 KOG0532 Leucine-rich repeat (L 99.4 3.7E-14 8.1E-19 155.6 -1.3 175 311-494 73-247 (722)
453 PRK09605 bifunctional UGMP fam 99.4 2E-12 4.4E-17 154.9 13.1 139 814-959 332-477 (535)
454 TIGR03724 arch_bud32 Kae1-asso 99.4 2.3E-12 5E-17 134.0 10.5 131 822-959 1-139 (199)
455 KOG0532 Leucine-rich repeat (L 99.3 5E-14 1.1E-18 154.6 -2.8 172 266-446 76-247 (722)
456 PRK14879 serine/threonine prot 99.3 5.2E-12 1.1E-16 132.7 12.0 130 821-958 2-143 (211)
457 KOG0590 Checkpoint kinase and 99.3 3.6E-13 7.7E-18 160.0 1.9 247 814-1071 19-285 (601)
458 COG4886 Leucine-rich repeat (L 99.3 2.3E-12 5E-17 149.4 8.6 195 221-424 97-292 (394)
459 COG4886 Leucine-rich repeat (L 99.3 1.8E-12 4E-17 150.2 7.7 198 245-451 97-295 (394)
460 cd05120 APH_ChoK_like Aminogly 99.3 1.1E-11 2.3E-16 122.8 11.0 133 819-958 2-138 (155)
461 PRK01723 3-deoxy-D-manno-octul 99.2 3.2E-11 6.9E-16 128.0 11.3 136 820-959 36-192 (239)
462 KOG1909 Ran GTPase-activating 99.2 8.4E-13 1.8E-17 137.6 -5.9 250 69-349 26-310 (382)
463 KOG1259 Nischarin, modulator o 99.1 8.1E-12 1.8E-16 126.6 0.5 132 381-518 280-412 (490)
464 KOG1259 Nischarin, modulator o 99.1 1.1E-11 2.3E-16 125.7 0.3 133 189-327 280-413 (490)
465 KOG1909 Ran GTPase-activating 99.1 1.9E-12 4E-17 135.0 -5.4 170 482-656 93-283 (382)
466 KOG0531 Protein phosphatase 1, 99.1 1.6E-11 3.5E-16 142.3 0.4 151 191-350 70-221 (414)
467 KOG0531 Protein phosphatase 1, 99.1 2E-11 4.4E-16 141.4 1.1 219 94-326 69-290 (414)
468 KOG0601 Cyclin-dependent kinas 99.1 1.3E-10 2.8E-15 131.3 6.4 240 816-1071 115-378 (524)
469 PF14580 LRR_9: Leucine-rich r 99.0 2E-10 4.3E-15 113.5 5.6 124 571-698 19-147 (175)
470 KOG3207 Beta-tubulin folding c 99.0 3.1E-11 6.8E-16 129.3 -0.7 158 145-302 121-284 (505)
471 TIGR01982 UbiB 2-polyprenylphe 99.0 2.6E-09 5.5E-14 123.5 14.6 137 821-960 123-308 (437)
472 KOG3207 Beta-tubulin folding c 99.0 4.5E-11 9.8E-16 128.1 -0.5 210 166-398 118-339 (505)
473 PF14580 LRR_9: Leucine-rich r 99.0 1.8E-10 3.9E-15 113.8 2.4 66 165-230 60-126 (175)
474 KOG4658 Apoptotic ATPase [Sign 98.9 7.5E-10 1.6E-14 136.5 6.9 131 70-203 520-652 (889)
475 KOG1243 Protein kinase [Genera 98.9 1.2E-08 2.5E-13 116.5 13.9 161 835-1006 33-200 (690)
476 KOG4658 Apoptotic ATPase [Sign 98.9 9.5E-10 2.1E-14 135.6 4.8 299 191-514 521-828 (889)
477 cd05151 ChoK Choline Kinase (C 98.9 5.9E-09 1.3E-13 105.3 8.8 128 821-958 4-136 (170)
478 KOG1266 Protein kinase [Signal 98.9 2.9E-09 6.3E-14 110.1 6.1 188 868-1071 121-330 (458)
479 COG4248 Uncharacterized protei 98.8 2E-07 4.3E-12 100.1 17.8 244 818-1073 14-297 (637)
480 PF13855 LRR_8: Leucine rich r 98.8 6.5E-09 1.4E-13 84.4 3.8 61 595-655 1-61 (61)
481 PF13855 LRR_8: Leucine rich r 98.7 6.7E-09 1.5E-13 84.3 3.1 58 411-468 3-60 (61)
482 KOG0601 Cyclin-dependent kinas 98.7 1.1E-08 2.4E-13 115.9 5.7 239 812-1072 262-514 (524)
483 PRK04750 ubiB putative ubiquin 98.7 2.7E-07 5.9E-12 107.8 17.1 143 814-960 119-315 (537)
484 PF08263 LRRNT_2: Leucine rich 98.7 2E-08 4.3E-13 74.4 3.7 41 2-45 3-43 (43)
485 cd05146 RIO3_euk RIO kinase fa 98.7 2.1E-07 4.6E-12 94.0 12.1 135 820-961 2-176 (197)
486 KOG1859 Leucine-rich repeat pr 98.6 2.5E-09 5.5E-14 121.0 -3.8 126 549-680 166-292 (1096)
487 KOG1859 Leucine-rich repeat pr 98.6 4.9E-10 1.1E-14 126.6 -9.8 127 193-326 164-292 (1096)
488 KOG0606 Microtubule-associated 98.6 2.3E-08 5E-13 118.8 2.6 243 813-1067 802-1084(1205)
489 KOG2137 Protein kinase [Signal 98.5 2.8E-08 6.1E-13 113.9 1.9 150 913-1072 106-265 (700)
490 cd05154 ACAD10_11_like Acyl-Co 98.4 1.5E-06 3.3E-11 92.0 12.4 136 821-958 4-206 (223)
491 COG3642 Mn2+-dependent serine/ 98.4 6E-07 1.3E-11 87.1 7.2 132 821-958 2-140 (204)
492 KOG2982 Uncharacterized conser 98.4 4.2E-08 9.1E-13 100.2 -1.0 186 72-278 70-262 (418)
493 KOG3087 Serine/threonine prote 98.4 2.1E-06 4.4E-11 82.8 9.4 136 819-958 11-165 (229)
494 KOG2982 Uncharacterized conser 98.3 8E-08 1.7E-12 98.3 -0.2 186 264-470 70-262 (418)
495 KOG4579 Leucine-rich repeat (L 98.3 5.5E-08 1.2E-12 88.2 -2.8 59 434-494 78-136 (177)
496 KOG3741 Poly(A) ribonuclease s 98.3 1.8E-05 4E-10 87.9 15.3 205 827-1072 288-521 (655)
497 PF01163 RIO1: RIO1 family; I 98.2 8.4E-06 1.8E-10 82.3 10.9 124 830-960 1-157 (188)
498 COG0478 RIO-like serine/threon 98.2 9.3E-06 2E-10 83.8 10.6 138 817-960 93-253 (304)
499 KOG4579 Leucine-rich repeat (L 98.2 9.1E-08 2E-12 86.8 -3.5 109 363-476 29-141 (177)
500 COG5238 RNA1 Ran GTPase-activa 98.2 1.4E-07 3.1E-12 95.3 -2.6 187 71-278 28-255 (388)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1e-109 Score=1072.70 Aligned_cols=903 Identities=36% Similarity=0.583 Sum_probs=563.6
Q ss_pred hhHHHHHHHHHhccCCCCCCCcCCCCcCCCCCCCCCccceEEeCCCCceeEEEecccccccccCCcccCCCCCccEEEcc
Q 042958 2 EEAHALLRWKTSLQNHNNGSLLSSWTLNNVTKTSPCAWVGIHCNRGGRVNSINLTSIGLKGMLHDFSFSSFPHLAYLDLW 81 (1075)
Q Consensus 2 ~~~~all~~k~~~~~~~~~~~l~sw~~~~~~~~~~c~w~gv~C~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~ 81 (1075)
+|++||++||+++.++ . +.+.+|+. .+.+|.|.||+|+..++|+.++++++++.|.+++. +..+++|++|||+
T Consensus 29 ~~~~~l~~~~~~~~~~-~-~~~~~w~~----~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~-~~~l~~L~~L~Ls 101 (968)
T PLN00113 29 EELELLLSFKSSINDP-L-KYLSNWNS----SADVCLWQGITCNNSSRVVSIDLSGKNISGKISSA-IFRLPYIQTINLS 101 (968)
T ss_pred HHHHHHHHHHHhCCCC-c-ccCCCCCC----CCCCCcCcceecCCCCcEEEEEecCCCccccCChH-HhCCCCCCEEECC
Confidence 6899999999999654 3 46789962 23359999999987788888877776666665443 5566666666666
Q ss_pred CCCccCCCCcccc-ccCCCceeecccCcccccCCCCCCCCCCCcEEEccCcccCCCCCccccccCCcceeecccccccCC
Q 042958 82 HNQLYGNIPPQIG-NISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRLSSLNYLALYSNYLEDL 160 (1075)
Q Consensus 82 ~n~l~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 160 (1075)
+|+++|.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|+|++|.+++.+|
T Consensus 102 ~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p---------------------- 157 (968)
T PLN00113 102 NNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIP---------------------- 157 (968)
T ss_pred CCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCC----------------------
Confidence 6666555555443 455555555555555444442 223334444443333333222
Q ss_pred CCCCCCCCCCCCEEEcCCCCCCCCCCccccCccccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCC
Q 042958 161 IPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNL 240 (1075)
Q Consensus 161 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 240 (1075)
..++++++|++|+|++|.+.+.+|..|+++++|++|+|++|.+.+.+ |..++.+
T Consensus 158 --~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~------------------------p~~l~~l 211 (968)
T PLN00113 158 --NDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQI------------------------PRELGQM 211 (968)
T ss_pred --hHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcC------------------------ChHHcCc
Confidence 22444444555555555554444444444444444444444444444 4444444
Q ss_pred CCCCeEeccCCCCCCccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceec
Q 042958 241 RSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYI 320 (1075)
Q Consensus 241 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 320 (1075)
++|++|+|++|.+++.+|..++++++|++|++++|.+++.+|..|+++++|+.|++++|++.+..|..+.++++|++|++
T Consensus 212 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 291 (968)
T PLN00113 212 KSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDL 291 (968)
T ss_pred CCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEEC
Confidence 44444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred ccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCccccCCCcccceeeecccccccc
Q 042958 321 HNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGS 400 (1075)
Q Consensus 321 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 400 (1075)
++|.+.+.+|..+.++++|+.|++++|.+.+.+|.. +..+++|+.|++++|++.+.
T Consensus 292 s~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~------------------------~~~l~~L~~L~L~~n~l~~~ 347 (968)
T PLN00113 292 SDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA------------------------LTSLPRLQVLQLWSNKFSGE 347 (968)
T ss_pred cCCeeccCCChhHcCCCCCcEEECCCCccCCcCChh------------------------HhcCCCCCEEECcCCCCcCc
Confidence 444444444444444444444444444444333333 34444444444444444444
Q ss_pred CChhhccCCCCCeEEeeccccccccccccccccccceecccccccccCCCCCCccccccccccccCCccccCCCccccCc
Q 042958 401 IPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNL 480 (1075)
Q Consensus 401 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 480 (1075)
+|..++.+++|+.|++++|++++..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|..|..+
T Consensus 348 ~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l 427 (968)
T PLN00113 348 IPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKL 427 (968)
T ss_pred CChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcC
Confidence 44445555555555555555555555555555555555666666655566666666666666666666666666666666
Q ss_pred CCCCEEeCCCCcccCCCcccccCCCccceeeccCCCCCCCCCccccCccccccccccccccccccCCcccccccCCCccc
Q 042958 481 RSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIV 560 (1075)
Q Consensus 481 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~L~Ls~N~l~ 560 (1075)
+.|+.|++++|.+++.+|..+..+++|+.|+|++|++.+.+|..+
T Consensus 428 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~----------------------------------- 472 (968)
T PLN00113 428 PLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF----------------------------------- 472 (968)
T ss_pred CCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-----------------------------------
Confidence 777777777777766666666566666666666665543222111
Q ss_pred cccchhhhhhhHhHHHhhcccccccccccccCcccccceeecCCCcccCcccccccccccceEEEccccccccccchhcc
Q 042958 561 GEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLE 640 (1075)
Q Consensus 561 ~~~p~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 640 (1075)
..++|+.|||++|++++.+|..|..+++|++|+|++|++++.+|..+.
T Consensus 473 --------------------------------~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 520 (968)
T PLN00113 473 --------------------------------GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELS 520 (968)
T ss_pred --------------------------------ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHc
Confidence 123567777777777777777777788888888888888888888888
Q ss_pred cccccceeeeccccccCchhhhhccccccceeecCCCccccCChhhhcccccccEEeecCCccCCCCCCCcccccccccc
Q 042958 641 ELIHLSELDLSHNFLREAIPSQICIMQSLENLNLSHNSLVGLIPSCFEKMHGLLRIDISYNELQGPIPNSIAFRDAPIEA 720 (1075)
Q Consensus 641 ~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~~s~N~~~~~~p~~~~~~~~~~~~ 720 (1075)
.+.+|++|+|++|.+++.+|..+..+++|+.|++++|+++|.+|..+..++.|+.+|+++|++.|.+|...+|..+...+
T Consensus 521 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~ 600 (968)
T PLN00113 521 SCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASA 600 (968)
T ss_pred CccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhh
Confidence 88888888888888888888888888888888999999988999999999999999999999999999988888888888
Q ss_pred ccCCccccCCCC--CCCcccccccccccceeEEEEEehhHHHHHHHHHHHHHHHhhhheecccccccCCCCCCcccccee
Q 042958 721 LQGNKGLCGDVK--GLPSCKTLKSNKQALRKIWVVVVFPLLGIVALLISLIGLFFKFQRRNNDLQTQQSSPGNTRGLLSV 798 (1075)
Q Consensus 721 ~~~n~~lcg~~~--~l~~c~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 798 (1075)
+.+|+.+||..+ +.++|.... +. ..+.++++++++++++++++++++++++||++. +.++.+..........
T Consensus 601 ~~~n~~lc~~~~~~~~~~c~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 674 (968)
T PLN00113 601 VAGNIDLCGGDTTSGLPPCKRVR----KT-PSWWFYITCTLGAFLVLALVAFGFVFIRGRNNL-ELKRVENEDGTWELQF 674 (968)
T ss_pred hcCCccccCCccccCCCCCcccc----cc-ceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccc
Confidence 999999999653 356775321 11 122233333333333333322233333332221 1111111110000000
Q ss_pred ec--ccccccHHHHHHHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCc
Q 042958 799 LT--FEGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN 875 (1075)
Q Consensus 799 ~~--~~~~~~~~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 875 (1075)
.. ....+.++++ ...|+..+.||+|+||.||+|.. .+|+.||||++..... ....|++.+++++|||
T Consensus 675 ~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~Hpn 744 (968)
T PLN00113 675 FDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPN 744 (968)
T ss_pred cccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCC
Confidence 00 0112233333 34677888999999999999976 5799999999864321 1234688899999999
Q ss_pred eeeEEEEeeccccchhheecCcccc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCce
Q 042958 876 IVKFYGFCSHVRHSLAMILSNNAAA------KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAH 949 (1075)
Q Consensus 876 iv~l~~~~~~~~~~l~~~~~~~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 949 (1075)
||+++|+|.+....+ +++++...+ ..++|.++.+++.|||+|++|||..+.++|+||||||+||+++.++.++
T Consensus 745 Iv~~~~~~~~~~~~~-lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~ 823 (968)
T PLN00113 745 IVKLIGLCRSEKGAY-LIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPH 823 (968)
T ss_pred cceEEEEEEcCCCCE-EEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceE
Confidence 999999998765432 333322211 3479999999999999999999977666999999999999999999888
Q ss_pred EeccccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccc--hh----hhh
Q 042958 950 VSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSS--SL----NLN 1023 (1075)
Q Consensus 950 l~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~--~~----~~~ 1023 (1075)
+. ||.+...... ....+++.|+|||++.+..++.++|||||||++|||+||+.||+........ .. ...
T Consensus 824 ~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 898 (968)
T PLN00113 824 LR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD 898 (968)
T ss_pred EE-eccccccccC----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc
Confidence 76 6665443221 2236789999999999999999999999999999999999998643221110 00 001
Q ss_pred hhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1024 IALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.....+.++.+........++..++.+++.+||+.||++||||+||++.|+
T Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~ 949 (968)
T PLN00113 899 CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLE 949 (968)
T ss_pred cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHH
Confidence 112334455443333344566778999999999999999999999999885
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.9e-61 Score=623.94 Aligned_cols=496 Identities=41% Similarity=0.598 Sum_probs=326.7
Q ss_pred CceeEEEecccccccccCCcccCCCCCccEEEccCCCccCCCCccccccCCCceeecccCcccccCCCCCCCCCCCcEEE
Q 042958 48 GRVNSINLTSIGLKGMLHDFSFSSFPHLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQ 127 (1075)
Q Consensus 48 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 127 (1075)
.++..|+|+++.+.|.++...+..+++|++|||++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|+
T Consensus 93 ~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 170 (968)
T PLN00113 93 PYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLD 170 (968)
T ss_pred CCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEE
Confidence 46788999999999999887667999999999999999999985 6799999999999999999999999999999999
Q ss_pred ccCcccCCCCCccccccCCcceeecccccccCCCCCCCCCCCCCCEEEcCCCCCCCCCCccccCccccceEeeecccccc
Q 042958 128 LFENQLNGSIPYEIGRLSSLNYLALYSNYLEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSG 207 (1075)
Q Consensus 128 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 207 (1075)
|++|.+.+.+|.. ++++++|++|+|++|.+++.+|..|+++++|++|+|++|++++
T Consensus 171 L~~n~l~~~~p~~------------------------~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 226 (968)
T PLN00113 171 LGGNVLVGKIPNS------------------------LTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG 226 (968)
T ss_pred CccCcccccCChh------------------------hhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCC
Confidence 9999998777655 6778889999999999999999999999999999999999998
Q ss_pred ccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCCCCcccccccccccccccCcCCCCcccCC
Q 042958 208 SIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGN 287 (1075)
Q Consensus 208 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 287 (1075)
.+|..++++++|++|++++|.+++.+|..++.+++|++|++++|++.+.+|..+.++++|++|++++|.+++.+|..+.+
T Consensus 227 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 306 (968)
T PLN00113 227 EIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQ 306 (968)
T ss_pred cCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcC
Confidence 88888888888888888888888888888888888888888888887777777777777777777777776666666666
Q ss_pred CccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceee
Q 042958 288 LRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLY 367 (1075)
Q Consensus 288 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~ 367 (1075)
+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..++.+++|+.|++++|+
T Consensus 307 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~------------------- 367 (968)
T PLN00113 307 LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNN------------------- 367 (968)
T ss_pred CCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCe-------------------
Confidence 6666666666666666555555555555555555555554444444444444444444444
Q ss_pred ccccccCCCCccccCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccccccccccccccccceeccccccccc
Q 042958 368 LYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSG 447 (1075)
Q Consensus 368 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 447 (1075)
+.+.+|..+..+.+|+.|++++|++.+.+|..+..+++|+.|++++|++++..|..|..+++|+.|++++|.+++
T Consensus 368 -----l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 442 (968)
T PLN00113 368 -----LTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQG 442 (968)
T ss_pred -----eEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccC
Confidence 433444444444445555555555555555555555555555555555555455555555555555555555554
Q ss_pred CCCCCCccccccccccccCCccccCCCccccCcCCCCEEeCCCCcccCCCcccccCCCccceeeccCCCCCCCCCccccC
Q 042958 448 SIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGN 527 (1075)
Q Consensus 448 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 527 (1075)
.+|..+..+++|+.|+|++|++.+.+|.. ++ .++|+.|++++|++++.+|..+.+
T Consensus 443 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~------------------------~~-~~~L~~L~ls~n~l~~~~~~~~~~ 497 (968)
T PLN00113 443 RINSRKWDMPSLQMLSLARNKFFGGLPDS------------------------FG-SKRLENLDLSRNQFSGAVPRKLGS 497 (968)
T ss_pred ccChhhccCCCCcEEECcCceeeeecCcc------------------------cc-cccceEEECcCCccCCccChhhhh
Confidence 44444444444444444444444443332 21 234455555555444333333322
Q ss_pred ccccccccccccccccccCCcccccccCCCccccccchhhhhhhHhHHHhhcccccccccccccCcccccceeecCCCcc
Q 042958 528 LRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRL 607 (1075)
Q Consensus 528 l~~L~~L~l~~N~l~~~~p~~l~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 607 (1075)
+++|+.|++++|++ ++.+|..+..+++|++|+|++|.+
T Consensus 498 l~~L~~L~Ls~N~l------------------------------------------~~~~p~~~~~l~~L~~L~Ls~N~l 535 (968)
T PLN00113 498 LSELMQLKLSENKL------------------------------------------SGEIPDELSSCKKLVSLDLSHNQL 535 (968)
T ss_pred hhccCEEECcCCcc------------------------------------------eeeCChHHcCccCCCEEECCCCcc
Confidence 22222222211111 112223334445555666666666
Q ss_pred cCcccccccccccceEEEccccccccccchhcccccccceeeeccccccCchh
Q 042958 608 SNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIP 660 (1075)
Q Consensus 608 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~ 660 (1075)
++.+|..|+.+++|+.|+|++|++++.+|..+..+..|+.|++++|++.+.+|
T Consensus 536 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 536 SGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred cccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 65555555555555555555555555555555555555555555555555444
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-44 Score=402.89 Aligned_cols=269 Identities=40% Similarity=0.677 Sum_probs=219.3
Q ss_pred cccccHHHHHHHhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEE
Q 042958 802 EGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYG 881 (1075)
Q Consensus 802 ~~~~~~~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 881 (1075)
...+++.|+..||++|...+.||+|+||.||+|...+|+.||||++....... .++|..|++++.+++|||+|+++|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE
Confidence 44689999999999999999999999999999999999999999886543221 356999999999999999999999
Q ss_pred Eeecccc-chhhe-ecCc--------cccC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceE
Q 042958 882 FCSHVRH-SLAMI-LSNN--------AAAK-DLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV 950 (1075)
Q Consensus 882 ~~~~~~~-~l~~~-~~~~--------~~~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 950 (1075)
||.+.+. .+.++ +... .... .++|.+|++||.++|+||+|||+.+.|+||||||||+|||+|+++++||
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 9998773 32222 2111 1112 7899999999999999999999999889999999999999999999999
Q ss_pred eccccccccCCCCCceecc-ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccc------cc-hhhh
Q 042958 951 SDFGIAKFLKPDSSNWTEL-AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMS------SS-SLNL 1022 (1075)
Q Consensus 951 ~DfGla~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~------~~-~~~~ 1022 (1075)
+|||+|+............ .||.+|+|||++..+..+.|+|||||||+++|++||+.|.+...... +. ....
T Consensus 219 sDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 219 SDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred cCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 9999997655312222222 89999999999999999999999999999999999999887543111 11 1112
Q ss_pred hhhhhhccCCCCCCCCcCcH-HHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1023 NIALDEMLDPRLPTPSCIVQ-DKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.....+++|+++... .+.. .+...+..++.+|++.+|++||+|.||+++|+
T Consensus 299 ~~~~~eiiD~~l~~~-~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEG-EYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred CcchhheeCCCccCC-CCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 226788899987632 2232 67778999999999999999999999999874
No 4
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.6e-45 Score=377.98 Aligned_cols=468 Identities=34% Similarity=0.488 Sum_probs=272.2
Q ss_pred CcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEcc
Q 042958 218 NLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLG 297 (1075)
Q Consensus 218 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 297 (1075)
.|+.+.+++|.++. +-+.+.++..|.+|++++|++. ..|.+++.+..++.|+.++|+++ .+|..+..+.+|+.|+++
T Consensus 46 ~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 34444444444432 2223444444444444444444 33444444444444444444444 344444444444444444
Q ss_pred CCCCCCCcCCCCCccccccceecccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCC
Q 042958 298 YNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSI 377 (1075)
Q Consensus 298 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 377 (1075)
+|.+. ..|+.++.+..|+.++..+|+++ ..|..+..+.+|..|++.+|++... |+..-.++.|++|+..+|-+ +.+
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~N~L-~tl 198 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNSNLL-ETL 198 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccchhhh-hcC
Confidence 44444 33444444444444444444444 3444444444444444444444422 22222244444555444444 344
Q ss_pred ccccCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccccccccccccccccceecccccccccCCCCCCcccc
Q 042958 378 PSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLT 457 (1075)
Q Consensus 378 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 457 (1075)
|..++.+.+|+-|+|..|+|. ..| .|.++..|++|+++.|+|.....+...++++|..|||.+|++. ..|+.++.+.
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLr 275 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLR 275 (565)
T ss_pred ChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhh
Confidence 444455555555555555553 333 4444445555555555554222222224555555555555554 4455555555
Q ss_pred ccccccccCCccccCCCccccCcCCCCEEeCCCCcccCCCcccccCC--Cccceee-------ccCCC---------CCC
Q 042958 458 NLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNL--SNLVILY-------LYNNS---------LFD 519 (1075)
Q Consensus 458 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~-------L~~N~---------l~~ 519 (1075)
+|++||+++|.|+ .+|.+++++ .|+.|-+.+|++..+-.+.+..= .-|++|. ++.-. ..+
T Consensus 276 sL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~ 353 (565)
T KOG0472|consen 276 SLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSE 353 (565)
T ss_pred hhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCC
Confidence 5555555555555 344445555 45555555555432111111000 0011110 00000 000
Q ss_pred CCCccccCccccccccccccccccccCC---------cccccccCCCccccccchhhhhhhHhH-HHhhccccccccccc
Q 042958 520 SIPSELGNLRSLSMLSFAYNKLSGSIPH---------SLGVLDLSSNHIVGEIPTELGKLNFLI-KLILAQNQLSGQLSP 589 (1075)
Q Consensus 520 ~~~~~l~~l~~L~~L~l~~N~l~~~~p~---------~l~~L~Ls~N~l~~~~p~~~~~~~~l~-~L~l~~n~l~~~~~~ 589 (1075)
..| ....+...++|+++.-+++ .+|. -+...++++|++. ++|..+..+..++ .+.+++|.+. .+|.
T Consensus 354 ~~~-~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~ 429 (565)
T KOG0472|consen 354 SFP-DIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPL 429 (565)
T ss_pred ccc-chhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchH
Confidence 011 1234455566666666665 3443 1567889999998 8899888887665 4555555555 7788
Q ss_pred ccCcccccceeecCCCcccCcccccccccccceEEEccccccccccchhcccccccceeeeccccccCchhhhhcccccc
Q 042958 590 KLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIPSQICIMQSL 669 (1075)
Q Consensus 590 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L 669 (1075)
.++.+++|+.|+|++|.+. .+|.+++.+..|+.||+|.|+|. .+|..+..+..|+.+-.++|++..+.|+.+.+|..|
T Consensus 430 ~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL 507 (565)
T KOG0472|consen 430 ELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNL 507 (565)
T ss_pred HHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhc
Confidence 8999999999999999997 89999999999999999999996 699999999999999999999999888889999999
Q ss_pred ceeecCCCccccCChhhhcccccccEEeecCCccC
Q 042958 670 ENLNLSHNSLVGLIPSCFEKMHGLLRIDISYNELQ 704 (1075)
Q Consensus 670 ~~L~ls~N~l~~~~p~~~~~~~~l~~l~~s~N~~~ 704 (1075)
..|||.+|.|. .||+.+++|.+|+.|++++|+|+
T Consensus 508 ~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 508 TTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 99999999998 67899999999999999999987
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=7.1e-46 Score=384.01 Aligned_cols=483 Identities=33% Similarity=0.442 Sum_probs=344.5
Q ss_pred CCCCCEEEcCCCCCCCCCCccccCccccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEe
Q 042958 168 LSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLS 247 (1075)
Q Consensus 168 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 247 (1075)
-..|+.|.+++|.++...+ .+.++..|.+|++++|+++ ..|.+++.+..++.++.++|++. .+|+.++.+.+|..|+
T Consensus 44 qv~l~~lils~N~l~~l~~-dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~ 120 (565)
T KOG0472|consen 44 QVDLQKLILSHNDLEVLRE-DLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLD 120 (565)
T ss_pred hcchhhhhhccCchhhccH-hhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhh
Confidence 3456677777777764443 3677777788888888877 66777777777888888888776 5677777778888888
Q ss_pred ccCCCCCCccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceecccccccC
Q 042958 248 LGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSG 327 (1075)
Q Consensus 248 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 327 (1075)
.++|.+. .+|+.++.+-.|+.|+..+|+++ ..|.++..+.+|..+++.+|+++...|..+. ++.|++|+...|.+.
T Consensus 121 ~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~- 196 (565)
T KOG0472|consen 121 CSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE- 196 (565)
T ss_pred cccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-
Confidence 8888877 66777777777888888888887 4677777777778888888887755444444 777888887777777
Q ss_pred CCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCcccc-CCCcccceeeeccccccccCChhhc
Q 042958 328 SIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSEL-GNLRSLSMLSLGYNKLSGSIPHSLG 406 (1075)
Q Consensus 328 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~ 406 (1075)
.+|..++.+.+|+.|++.+|++. ..| .|..+..|++|+++.|++ ..+|.+. .++.++..|||..|++. ..|+.+.
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i-~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQI-EMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHH-HhhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 57777777888888888888877 455 777777777777777777 4455443 47777777777777775 6777777
Q ss_pred cCCCCCeEEeeccccccccccccccccccceecccccccccCCCCCCccc--cccccccc--cCCccccCCCccccCcCC
Q 042958 407 NLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNL--TNLDALYL--YDNSLSGSIPGEIGNLRS 482 (1075)
Q Consensus 407 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L--~~N~l~~~~p~~~~~l~~ 482 (1075)
-+.+|++||+|+|.|+ ..|.+++++ .|+.|-+.+|.+..+--+.+.+= .-|++|.= ..-.++..-- +.
T Consensus 273 lLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~---~~--- 344 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEG---GT--- 344 (565)
T ss_pred HhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcc---cc---
Confidence 7777777777777777 355567777 77777777777753211111110 11233321 1111110000 00
Q ss_pred CCEEeCCCCcccCCCcccccCCCccceeeccCCCCCCCCCccccCccc---cccccccccccccccCCcc-------ccc
Q 042958 483 ISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRS---LSMLSFAYNKLSGSIPHSL-------GVL 552 (1075)
Q Consensus 483 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~---L~~L~l~~N~l~~~~p~~l-------~~L 552 (1075)
-..-++ .. ........+.+.+.|++++-+++. +|.+...... ...++++.|++. .+|+.+ +.+
T Consensus 345 e~~~t~----~~-~~~~~~~~~i~tkiL~~s~~qlt~-VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l 417 (565)
T KOG0472|consen 345 ETAMTL----PS-ESFPDIYAIITTKILDVSDKQLTL-VPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDL 417 (565)
T ss_pred cccCCC----CC-Ccccchhhhhhhhhhccccccccc-CCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHH
Confidence 000000 00 111123335566677777766653 4444433333 566777777775 455543 346
Q ss_pred ccCCCccccccchhhhhhhHhHHHhhcccccccccccccCcccccceeecCCCcccCcccccccccccceEEEccccccc
Q 042958 553 DLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFS 632 (1075)
Q Consensus 553 ~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 632 (1075)
++++|.++ .+|..++.+++++.|+|++|-+. .+|..++.+..|+.||+|.|+|. .+|..+..+..|+.+--++|++.
T Consensus 418 ~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~ 494 (565)
T KOG0472|consen 418 VLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIG 494 (565)
T ss_pred HhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccc
Confidence 77777776 89999999999999999999998 78899999999999999999997 89999888888998888889998
Q ss_pred cccchhcccccccceeeeccccccCchhhhhccccccceeecCCCccc
Q 042958 633 RGIPIKLEELIHLSELDLSHNFLREAIPSQICIMQSLENLNLSHNSLV 680 (1075)
Q Consensus 633 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~ 680 (1075)
...|..+.++.+|++|||.+|.+.. +|..+++|.+|++|++++|++.
T Consensus 495 ~vd~~~l~nm~nL~tLDL~nNdlq~-IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 495 SVDPSGLKNMRNLTTLDLQNNDLQQ-IPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccChHHhhhhhhcceeccCCCchhh-CChhhccccceeEEEecCCccC
Confidence 8888889999999999999999985 8889999999999999999998
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-41 Score=373.05 Aligned_cols=242 Identities=26% Similarity=0.426 Sum_probs=207.8
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.+|...+.||+|+|+.||+++. .+|+.||+|++.+.......+++.+.+|+++.++++|||||+++++|++....+.+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 6799999999999999999965 889999999998766566667889999999999999999999999999877654433
Q ss_pred -ec-------CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 -LS-------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 -~~-------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
+. .....+.+++.+.+.+..||+.|+.|||+. +|+|||||..|++++++.++||+|||+|..+..+...
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 21 123467899999999999999999999999 9999999999999999999999999999999988777
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
..+.+|||.|+|||++....++..+||||+|||||.|+.|++||+. ....+....+.......|. ..+
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet--------k~vkety~~Ik~~~Y~~P~----~ls 242 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET--------KTVKETYNKIKLNEYSMPS----HLS 242 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc--------chHHHHHHHHHhcCccccc----ccC
Confidence 8889999999999999999999999999999999999999999972 2233344444444444332 344
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+..++|.+++++||.+|||+++|++
T Consensus 243 ~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 243 AEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 46889999999999999999999985
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-41 Score=352.00 Aligned_cols=245 Identities=25% Similarity=0.396 Sum_probs=198.5
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc--chhh
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH--SLAM 892 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~l~~ 892 (1075)
+.+..+.||+|..|+|||+.++ +++.+|+|++... .+...++++.+|++++++.+||+||.+||.|..... .+.|
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 3455688999999999999765 7999999999543 445567899999999999999999999999987663 3444
Q ss_pred eecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 893 ILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 893 ~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
.+++.+ ..+.+++...-+|+.+|++||.|||+.. +||||||||+|||++..|++||||||.++.+... .
T Consensus 158 EYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~ 233 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--I 233 (364)
T ss_pred hhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh--h
Confidence 443332 2345788888999999999999999732 9999999999999999999999999999987654 4
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
..+.+||..|||||.+.+..|+.++||||||++++|+.+|+.||.... .........+..+.+...|.... ...+
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~---~~~~~~~~Ll~~Iv~~ppP~lP~--~~fS 308 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN---PPYLDIFELLCAIVDEPPPRLPE--GEFS 308 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC---CCCCCHHHHHHHHhcCCCCCCCc--ccCC
Confidence 567899999999999999999999999999999999999999987541 11223344455666543332211 1366
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.++..++..|+++||.+|||++|+++
T Consensus 309 ~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 309 PEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 77999999999999999999999875
No 8
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=373.11 Aligned_cols=245 Identities=28% Similarity=0.523 Sum_probs=195.0
Q ss_pred cCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc--chhh
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH--SLAM 892 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~l~~ 892 (1075)
.+....+.+|+|+||+||+|.++....||||++......... .++|.+|+.+|.+++|||||+++|+|..... .+++
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 334445669999999999999994444999999876544444 7899999999999999999999999998763 2333
Q ss_pred eecCc--------c-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEEecCCCCCeeeCCCC-CceEeccccccccCC
Q 042958 893 ILSNN--------A-AAKDLGWTRRMNVIKGISDALSYMHNDCFPP-IVHRDISSKNVLLDFDN-EAHVSDFGIAKFLKP 961 (1075)
Q Consensus 893 ~~~~~--------~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~ 961 (1075)
.+... . ....+++..+++||.|||+||+|||++ + ||||||||+|||++.++ ++||+|||+++....
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 22211 1 256799999999999999999999999 7 99999999999999998 999999999987664
Q ss_pred CCCceeccccccCccCccccc--cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhcc-CCCCCCCC
Q 042958 962 DSSNWTELAGTYGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEML-DPRLPTPS 1038 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1038 (1075)
.....+...||+.|||||++. ...|+.|+||||||+++|||+||+.||........ ...... ..+...+.
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~-------~~~v~~~~~Rp~~p~ 269 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV-------ASAVVVGGLRPPIPK 269 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH-------HHHHHhcCCCCCCCc
Confidence 434445578999999999999 56899999999999999999999999985543211 111111 12222221
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.++..+..++..||+.||++||++.|++..|+
T Consensus 270 ----~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 270 ----ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred ----cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 24556999999999999999999999999875
No 9
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=374.34 Aligned_cols=366 Identities=26% Similarity=0.274 Sum_probs=283.4
Q ss_pred CceeecccCcccccCCCCCCCCCCCcEEEccCcccCCCCCccccccCCcceeecccccccCCCCCCCCCCCCCCEEEcCC
Q 042958 99 LKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRLSSLNYLALYSNYLEDLIPPSLGNLSNLDTLHLYD 178 (1075)
Q Consensus 99 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 178 (1075)
-+.||+|+|.++..-+..|-++++|++++|.+|.++ .+|.......+|+.|+|.+|.|..+..+.++.++.|+.||||.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 345777777776666666777777777777777776 5666555566677777777777777777777788888888888
Q ss_pred CCCCCCCCccccCccccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccC
Q 042958 179 NSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIP 258 (1075)
Q Consensus 179 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 258 (1075)
|.|+.+.-..|..-.++++|+|++|.|+..-.+.|..+.+|..|.|++|+++...+..|.++++|+.|+|..|+|.-.--
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh
Confidence 88877766677766778888888888887777788888888888888888887666777788888888888888874335
Q ss_pred CCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCCCcccccccc
Q 042958 259 HSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRS 338 (1075)
Q Consensus 259 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 338 (1075)
-.|.++++|+.|.|..|.++..-..+|..+.++++|+|+.|++...-..++.+|+.|+.|+||+|.|..+.++.+.-.++
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftqk 318 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQK 318 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhccc
Confidence 67888888888888888888766778888888888888888888777778888888888888888888888888888888
Q ss_pred cccccccCCcccccCCCcCCCCCCcceeeccccccCCCCccccCCCcccceeeeccccccccCCh---hhccCCCCCeEE
Q 042958 339 LSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPH---SLGNLTNLATLD 415 (1075)
Q Consensus 339 L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~ 415 (1075)
|++|+|++|+|+...+++|..+..|++|.|++|.+...-...|..+++|+.|||++|.++..+.+ .|.++++|+.|+
T Consensus 319 L~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~ 398 (873)
T KOG4194|consen 319 LKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLR 398 (873)
T ss_pred ceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhee
Confidence 88888888888877777788888888888888888666666777888888888888888765543 566778888888
Q ss_pred eeccccccccccccccccccceecccccccccCCCCCCccccccccccccC
Q 042958 416 LYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYD 466 (1075)
Q Consensus 416 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 466 (1075)
|.+|+|..+.-.+|.++..|++|||.+|.|..+-|++|..+ +|+.|.+..
T Consensus 399 l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 399 LTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred ecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcc
Confidence 88888876666778888888888888888877777788777 777776554
No 10
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-42 Score=368.89 Aligned_cols=365 Identities=27% Similarity=0.270 Sum_probs=224.9
Q ss_pred CCEEEcCCCCCCCCCCccccCccccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccC
Q 042958 171 LDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGY 250 (1075)
Q Consensus 171 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 250 (1075)
-+.||+++|.++.+-+..|.++++|+++++.+|.++ .+|.......+|+.|+|.+|.|+.+-.+.++.++.|+.||||.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 345666666666666666666666666666666665 5555544455566666666666655555566666666666666
Q ss_pred CCCCCccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCCC
Q 042958 251 NKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIP 330 (1075)
Q Consensus 251 N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 330 (1075)
|.|+.+.-.+|..-.++++|+|++|.|+..-...|..+.+|..|.|+.|+++..++.+|.+|++|+.|+|..|+|.-..-
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh
Confidence 66664444455555566666666666665555566666666666666666665555666666666666666666653334
Q ss_pred cccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCccccCCCcccceeeeccccccccCChhhccCCC
Q 042958 331 SEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTN 410 (1075)
Q Consensus 331 ~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 410 (1075)
-.|.++++|+.|.|..|++...-...|..+.++++|+|..|++......++.+++.|+.|+||+|.|..+.+++....++
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftqk 318 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQK 318 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhccc
Confidence 45666666666666666666555556666666666666666665555556666666666666666666666666666666
Q ss_pred CCeEEeeccccccccccccccccccceecccccccccCCCCCCccccccccccccCCccccCCCc---cccCcCCCCEEe
Q 042958 411 LATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPG---EIGNLRSISNLA 487 (1075)
Q Consensus 411 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~ 487 (1075)
|++|+|++|+|+...++.|..+..|++|+|++|+|...-..+|..+.+|+.|+|++|.|+..+.. .|..+++|+.|+
T Consensus 319 L~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~ 398 (873)
T KOG4194|consen 319 LKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLR 398 (873)
T ss_pred ceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhee
Confidence 66666666666666666666666666666666666655555666666666666666666654432 355566666666
Q ss_pred CCCCcccCCCcccccCCCccceeeccCCCCCCCCCccccCcccccccccc
Q 042958 488 LNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFA 537 (1075)
Q Consensus 488 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~ 537 (1075)
|.+|+++.+.-..|.++.+|++|||.+|.|..+-|+.|..+ .|+.|-+.
T Consensus 399 l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 399 LTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred ecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 66666665555556666666666666666666666666665 55555443
No 11
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-40 Score=348.37 Aligned_cols=247 Identities=26% Similarity=0.338 Sum_probs=200.9
Q ss_pred HhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCc----hhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGE----MTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
..+.|.+.+.+|+|+||.|-+| ..++|+.||||++.+..... ......+.+|+++|++++|||||++.+++..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3467788899999999999999 66789999999998754332 122344679999999999999999999998876
Q ss_pred cchhheecCccc---------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC---CCceEecccc
Q 042958 888 HSLAMILSNNAA---------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD---NEAHVSDFGI 955 (1075)
Q Consensus 888 ~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfGl 955 (1075)
.. +|+++...+ .+.+.+.....+++|++.|+.|||+. ||+||||||+|||+..+ ..+||+|||+
T Consensus 250 s~-YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 250 SS-YMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred ce-EEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccch
Confidence 64 333433333 33456666788999999999999999 99999999999999766 6799999999
Q ss_pred ccccCCCCCceeccccccCccCccccccCCC---CcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCC
Q 042958 956 AKFLKPDSSNWTELAGTYGYVAPELAYTMKV---TEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDP 1032 (1075)
Q Consensus 956 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1075)
|+..+ ..+.+.+.+||+.|.|||++.+..+ ..++|+||+||++|-+++|.+||..... .....+++..+
T Consensus 326 AK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~-------~~sl~eQI~~G 397 (475)
T KOG0615|consen 326 AKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT-------DPSLKEQILKG 397 (475)
T ss_pred hhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC-------CccHHHHHhcC
Confidence 99887 5567888999999999999986653 3478999999999999999999974322 12234556666
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1033 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
++......+.+.+.+..++|.+|+..||++|||++|+++
T Consensus 398 ~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 398 RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 666655677888889999999999999999999999975
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-41 Score=333.01 Aligned_cols=244 Identities=24% Similarity=0.352 Sum_probs=195.2
Q ss_pred cCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEe-eccccchhh
Q 042958 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFC-SHVRHSLAM 892 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~l~~ 892 (1075)
.+|++.++||+|.||+|||+ ...+|..||.|.+.-.. -+...+++...|+.++++++|||||+++++- .+....+..
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 34677789999999999999 66789999999987433 3344578899999999999999999999843 333332333
Q ss_pred eecC-------------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 893 ILSN-------------NAAAKDLGWTRRMNVIKGISDALSYMHNDCF-PPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 893 ~~~~-------------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
+++. ..+...+++...++++.|+++||.++|.... ..|.||||||.||+++++|.+|++|||++++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 3222 2345668999999999999999999999422 1399999999999999999999999999999
Q ss_pred cCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 959 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
+........+.+|||.||+||.+.+.+|++||||||+||++|||+.-+.||.+.. ......++.....+.
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--------~~~L~~KI~qgd~~~-- 247 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--------LLSLCKKIEQGDYPP-- 247 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--------HHHHHHHHHcCCCCC--
Confidence 9887777788999999999999999999999999999999999999999997532 112223333333332
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKV 1069 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 1069 (1075)
.....++.++.+++..|+..||+.||+.-.+
T Consensus 248 ~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~ 278 (375)
T KOG0591|consen 248 LPDEHYSTDLRELINMCIAVDPEQRPDTVPY 278 (375)
T ss_pred CcHHHhhhHHHHHHHHHccCCcccCCCcchH
Confidence 1235677889999999999999999984333
No 13
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.5e-39 Score=369.33 Aligned_cols=244 Identities=25% Similarity=0.427 Sum_probs=196.3
Q ss_pred cCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
.+....+.||+|+||+||+|+.. +.+.||||.++.. .+.+.+++|.+|+++++.++|||||+++|+|...+.
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 44555688999999999999653 3457999999875 444568999999999999999999999999988766
Q ss_pred chhheecCc------------------cccCC----CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC
Q 042958 889 SLAMILSNN------------------AAAKD----LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN 946 (1075)
Q Consensus 889 ~l~~~~~~~------------------~~~~~----l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 946 (1075)
.++++.+.. ..+.+ ++..+.+.||.|||.|++||-++ .+|||||..+|+|+.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 544332110 12333 88999999999999999999999 899999999999999999
Q ss_pred CceEeccccccccCCCCC-cee-ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhh
Q 042958 947 EAHVSDFGIAKFLKPDSS-NWT-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLN 1023 (1075)
Q Consensus 947 ~~kl~DfGla~~~~~~~~-~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~ 1023 (1075)
.+||+|||+++..-..++ ... ...-+++|||||.|..++|+.+||||||||||||+++ |+.||.+... +
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn--------~ 712 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN--------Q 712 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--------H
Confidence 999999999997543322 211 2234689999999999999999999999999999998 9999976544 2
Q ss_pred hhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1024 IALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+.++.+.++++- ..++.++.+++++|..||+..|++||+++||-..|+
T Consensus 713 EVIe~i~~g~lL---~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 713 EVIECIRAGQLL---SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred HHHHHHHcCCcc---cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 334444455442 234566778999999999999999999999988774
No 14
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-39 Score=351.34 Aligned_cols=239 Identities=27% Similarity=0.453 Sum_probs=191.0
Q ss_pred CCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-chhheec
Q 042958 817 FDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-SLAMILS 895 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~l~~~~~ 895 (1075)
++..+.||+|.||+||.|.++....||+|.++.... ..++|.+|+++|++++|++||+++|+|..++. .+.+.+.
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m 283 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYM 283 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEec
Confidence 344578999999999999999777999999976422 24789999999999999999999999988662 2222221
Q ss_pred Cc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 896 NN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 896 ~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
.. ..+..+...+.+.++.|||+|++||+++ ++|||||.++|||++++..+||+|||+|+...++....
T Consensus 284 ~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~ 360 (468)
T KOG0197|consen 284 PKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA 360 (468)
T ss_pred ccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence 11 2456678888999999999999999999 99999999999999999999999999999655443322
Q ss_pred e-ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhc-cCCCCCCCCcCcHH
Q 042958 967 T-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEM-LDPRLPTPSCIVQD 1043 (1075)
Q Consensus 967 ~-~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 1043 (1075)
+ ...-++.|.|||.+...+++.|||||||||+||||+| |+.||......+ .++.+ ...+++.|..
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e--------v~~~le~GyRlp~P~~---- 428 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE--------VLELLERGYRLPRPEG---- 428 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--------HHHHHhccCcCCCCCC----
Confidence 2 2334679999999999999999999999999999998 999987443311 11111 2345665543
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
++..+.++|..||+.+|++|||++.+...++
T Consensus 429 CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 429 CPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred CCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 4556999999999999999999998887764
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-39 Score=333.39 Aligned_cols=237 Identities=26% Similarity=0.345 Sum_probs=195.1
Q ss_pred HhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
..++|++.++||+|+||+||.++. ++++.+|+|++++...-+....+....|..++.+++||.||+++-.|++.+..+.
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 357899999999999999999954 5799999999988766555557889999999999999999999988877655433
Q ss_pred heecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 892 MILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 892 ~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+ +... .....+++.+..-++..|+.||.|||+. +|||||+||+|||+|++|+++|+|||+++.....
T Consensus 103 V-ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 103 V-LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred E-EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 2 2222 2245678888888999999999999999 9999999999999999999999999999976666
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
.....+.+||+.|||||++.+..|+.++|+||+|+++|||++|.+||.... .....+.+...+.+.+...
T Consensus 179 ~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~--------~~~~~~~I~~~k~~~~p~~-- 248 (357)
T KOG0598|consen 179 GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED--------VKKMYDKILKGKLPLPPGY-- 248 (357)
T ss_pred CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc--------HHHHHHHHhcCcCCCCCcc--
Confidence 666777899999999999999999999999999999999999999997432 2333444444443333222
Q ss_pred HHHHHHHHHHHHccCCCCCCCC
Q 042958 1043 DKLISIVEVAISCLDENPESRP 1064 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RP 1064 (1075)
...+..+++.+.+++||++|-
T Consensus 249 -ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 249 -LSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -CCHHHHHHHHHHhccCHHHhc
Confidence 223588999999999999995
No 16
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.5e-39 Score=322.03 Aligned_cols=253 Identities=22% Similarity=0.372 Sum_probs=195.9
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
+.|+...++|+|+||.|||++.+ +|+.||||++.... .+....+-.++|++++++++|||+|.++++|...+....++
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 56788889999999999999665 69999999997643 34555677899999999999999999998886654432221
Q ss_pred -ecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 -LSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 -~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
+.+. .....++.+...++.+|++.|+.|+|++ +++||||||+||+++.++.+|+||||+|+.+..+...
T Consensus 81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~ 157 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDN 157 (396)
T ss_pred eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCcch
Confidence 1111 1233467888899999999999999999 9999999999999999999999999999999877788
Q ss_pred eeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh------hhhhhhhccC-------
Q 042958 966 WTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN------LNIALDEMLD------- 1031 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~------~~~~~~~~~~------- 1031 (1075)
++..+.|.+|+|||.+.+ ..|...+||||.||++.||++|.+-|.+.++.+.-... ..-...+++.
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G 237 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG 237 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence 889999999999998887 78999999999999999999999998765554311100 0000111111
Q ss_pred CCCCCCCc------CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1032 PRLPTPSC------IVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1032 ~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
-++|.+.. ........+.++++.|++.||.+|++.+|++.
T Consensus 238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 12222211 11223456889999999999999999999874
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=345.99 Aligned_cols=254 Identities=26% Similarity=0.410 Sum_probs=195.3
Q ss_pred HHHHHHhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 808 EEIIRATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 808 ~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
+++.+..+++.+...||+|.||+||+|.|. | .||||++.......+ +.+.|+.|+..+++-+|.||+-|+|||..+.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 445555566777899999999999999887 3 589999987765544 6789999999999999999999999998877
Q ss_pred cchhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 888 HSLAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 888 ~~l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
..++..+.+. .....+...+...||.|||+|+.|||.+ +|||||||..||++.+++++||+|||++..-
T Consensus 462 ~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 462 LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeee
Confidence 6322222111 1224467778889999999999999999 9999999999999999999999999998642
Q ss_pred C--CCCCceeccccccCccCccccccC---CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCC
Q 042958 960 K--PDSSNWTELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRL 1034 (1075)
Q Consensus 960 ~--~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1075)
. ..........|...|||||+++.+ +|++.+||||||+|+|||++|..||. +...+ +...+.-...-.
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~d------qIifmVGrG~l~ 611 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRD------QIIFMVGRGYLM 611 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChh------heEEEecccccC
Confidence 2 222334456788999999999754 58999999999999999999999997 22211 111111111112
Q ss_pred CCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1035 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+........+..++.+++..||..++++||.+.+|+..|+
T Consensus 612 pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 612 PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 2222233455668999999999999999999999999664
No 18
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=8e-40 Score=372.64 Aligned_cols=506 Identities=30% Similarity=0.360 Sum_probs=352.5
Q ss_pred EccCcccCCCCCccccccCCcceeecccccccCCCCCCCCCCCCCCEEEcCCCCCCCCCCccccCccccceEeeeccccc
Q 042958 127 QLFENQLNGSIPYEIGRLSSLNYLALYSNYLEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFS 206 (1075)
Q Consensus 127 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 206 (1075)
|++..++. .||..+..-..|+.|+++.|.+...+-+...+.-+|+.|++++|+++ ..|..+..+.+|+.|+++.|-|.
T Consensus 4 d~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~ 81 (1081)
T KOG0618|consen 4 DASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR 81 (1081)
T ss_pred ccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh
Confidence 33333333 33433333333555555555544433334445556999999999987 56777888999999999999998
Q ss_pred cccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCCCCcccccccccccccccCcCCCCcccC
Q 042958 207 GSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFG 286 (1075)
Q Consensus 207 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 286 (1075)
..|.+..++.+|++|.|.+|.++ ..|..+..+++|++||+|+|++. .+|..+..++.++.+..++|..... ++
T Consensus 82 -~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg 154 (1081)
T KOG0618|consen 82 -SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR----LG 154 (1081)
T ss_pred -hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh----hc
Confidence 77888999999999999999986 68999999999999999999998 7899999999999999999933322 22
Q ss_pred CCccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCccee
Q 042958 287 NLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATL 366 (1075)
Q Consensus 287 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L 366 (1075)
... ++.+++..|.+.+.++..+..++. .|+|..|.+. -..+..+.+|+.|....|++... --..++|+.|
T Consensus 155 ~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L 224 (1081)
T KOG0618|consen 155 QTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSEL----EISGPSLTAL 224 (1081)
T ss_pred ccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceE----EecCcchhee
Confidence 222 888999999999888888888777 7999999987 23567788999999999998732 2234789999
Q ss_pred eccccccCCCCccccCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccccccccccccccccceecccccccc
Q 042958 367 YLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLS 446 (1075)
Q Consensus 367 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 446 (1075)
+.++|.+....+. ..-.+|+++++++|+++ .+|.++..+.+|+.|+..+|+++ ..|..+....+|+.|++.+|.+.
T Consensus 225 ~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~ 300 (1081)
T KOG0618|consen 225 YADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE 300 (1081)
T ss_pred eeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh
Confidence 9999999744332 23367999999999998 56699999999999999999997 67888888999999999999998
Q ss_pred cCCCCCCccccccccccccCCccccCCCccccCcCC-CCEEeCCCCcccCCCcccccCCCccceeeccCCCCCCCCCccc
Q 042958 447 GSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRS-ISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSEL 525 (1075)
Q Consensus 447 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 525 (1075)
.+|....+++.|++|+|..|+|....+..+..+.. |..|+.+.|++....-..=..++.|+.|++.+|.+++..-+.+
T Consensus 301 -yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l 379 (1081)
T KOG0618|consen 301 -YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVL 379 (1081)
T ss_pred -hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhh
Confidence 67888888999999999999998544444444433 6777778888764332222346678888888888888777777
Q ss_pred cCccccccccccccccccccCCcccccccCCCccccccchhhhhhhHhHHHhhcccccccccccccCcccccceeecCCC
Q 042958 526 GNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSN 605 (1075)
Q Consensus 526 ~~l~~L~~L~l~~N~l~~~~p~~l~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N 605 (1075)
.+...|+.|+|+||+|. ..+...+.++..|+.|+|++|+|+ .+|..+..++.|++|...+|
T Consensus 380 ~~~~hLKVLhLsyNrL~------------------~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN 440 (1081)
T KOG0618|consen 380 VNFKHLKVLHLSYNRLN------------------SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSN 440 (1081)
T ss_pred ccccceeeeeecccccc------------------cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCC
Confidence 77777777777777664 233344555555555555555555 34455555555555555555
Q ss_pred cccCcccccccccccceEEEccccccccccchhcccccccceeeeccccccCchhhhhccccccceeecCCC
Q 042958 606 RLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIPSQICIMQSLENLNLSHN 677 (1075)
Q Consensus 606 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~N 677 (1075)
+|. ..| ++..++.|+.+|+|.|+|+...-.....-++|+.|||++|.-....-..+-.++++...+++-|
T Consensus 441 ~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 441 QLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred cee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 554 344 4455555555555555554321111111144555555555432222333333344444444433
No 19
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=323.88 Aligned_cols=194 Identities=28% Similarity=0.470 Sum_probs=163.7
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
...+|...+.||+|+||+||+|+++ ++..||||.+..... ....++.+..|+.+++.++|||||++++++..++..+.
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 3467888889999999999999665 689999999976543 23346778999999999999999999999987765432
Q ss_pred h-eecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC------CCceEecccccc
Q 042958 892 M-ILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD------NEAHVSDFGIAK 957 (1075)
Q Consensus 892 ~-~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~------~~~kl~DfGla~ 957 (1075)
+ .+...+ ..+.+++...+.++.|+|.|+++||++ +||||||||.|||++.. -.+||+|||+|+
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 2 222211 134678888999999999999999999 99999999999999875 358999999999
Q ss_pred ccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCc
Q 042958 958 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 1011 (1075)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~ 1011 (1075)
.+.+. ....+.+|++-|||||+++.++|+.|+|+||+|+++||+++|+.||+.
T Consensus 164 ~L~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 164 FLQPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hCCch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 98743 445668999999999999999999999999999999999999999983
No 20
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=8e-38 Score=336.97 Aligned_cols=241 Identities=24% Similarity=0.352 Sum_probs=201.6
Q ss_pred cCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|.+.+.||+|.||.|||| +..+.+.||+|.+.+....+.+ .+.+.+|++++++++|||||.++++|+...+.+.+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~-l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKE-LKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHH-HHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 57888899999999999999 5557999999999876655443 577999999999999999999999998877764443
Q ss_pred ec-------CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 894 LS-------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 894 ~~-------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
.+ .......++++..+.+++++..||.|||+. +|.|||+||.||+++..+.+|+||||+|+.+.......
T Consensus 81 e~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl 157 (808)
T KOG0597|consen 81 EYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL 157 (808)
T ss_pred hhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence 21 123456689999999999999999999999 99999999999999999999999999999998877777
Q ss_pred eccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 967 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
+...|||.|||||...++.|+..+|.||+||++||+++|++||... ......+.+.....+.| ...+.
T Consensus 158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--------si~~Lv~~I~~d~v~~p----~~~S~ 225 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--------SITQLVKSILKDPVKPP----STASS 225 (808)
T ss_pred eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--------HHHHHHHHHhcCCCCCc----ccccH
Confidence 8889999999999999999999999999999999999999998521 11222333333333322 35566
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1047 SIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+..++...+.+||.+|.|..+++.
T Consensus 226 ~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 226 SFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHHHHHhhcChhhcccHHHHhc
Confidence 7999999999999999999998864
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=333.95 Aligned_cols=245 Identities=26% Similarity=0.376 Sum_probs=199.9
Q ss_pred HHHhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeecccc
Q 042958 811 IRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 811 ~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 888 (1075)
.+...+|..++.||+|+|++||+| +..+++.||||++.+...-.+...+.+..|-.+|.+| +||.|++++-.|.+..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~- 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE- 147 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc-
Confidence 344578999999999999999999 5568999999999765544444567788999999999 9999999998887744
Q ss_pred chhheecCcccc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 889 SLAMILSNNAAA---------KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 889 ~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
.+++.++....+ +.+++...+.+|.+|+.|++|||++ |||||||||+|||+|+||++||+|||.|+.+
T Consensus 148 sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence 455555444433 4466777788999999999999999 9999999999999999999999999999987
Q ss_pred CCCCC-----------c--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhh
Q 042958 960 KPDSS-----------N--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIAL 1026 (1075)
Q Consensus 960 ~~~~~-----------~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 1026 (1075)
.+... . ....+||..|.+||++.....++.+|+|+|||++|+|+.|++||... +.....
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~--------NeyliF 296 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA--------NEYLIF 296 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc--------cHHHHH
Confidence 65321 1 14578999999999999999999999999999999999999999743 233445
Q ss_pred hhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1027 DEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+++++-.+..+.... ..+.+++++.+..||.+|+|++||.+
T Consensus 297 qkI~~l~y~fp~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 297 QKIQALDYEFPEGFP----EDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHHhcccCCCCCC----HHHHHHHHHHHccCccccccHHHHhh
Confidence 555555554443333 45899999999999999999999875
No 22
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.9e-37 Score=303.41 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=194.6
Q ss_pred cCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|...+++|+|.||.||+| +..+|+.||||+++.....+. ......+|++.++.++|+||+.++++|.+.+..-.++
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG-i~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG-INRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC-ccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 46777889999999999999 567899999999987643322 2356789999999999999999999997765432222
Q ss_pred ec-C-------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 LS-N-------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 ~~-~-------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
.+ . ......++-.+...++.++.+|++|+|++ .|+||||||.|+|++++|.+||+|||+|+.+.+....
T Consensus 81 Efm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 81 EFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred EeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 11 1 12345678889999999999999999999 9999999999999999999999999999999987776
Q ss_pred eeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh--------hhh-----hhhhccC
Q 042958 966 WTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN--------LNI-----ALDEMLD 1031 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~--------~~~-----~~~~~~~ 1031 (1075)
.+..+.|.+|+|||.+.|. .|+..+||||.||++.||+-|.+-|.+.++.+.-... .+. .+..+..
T Consensus 158 ~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~ 237 (318)
T KOG0659|consen 158 QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVK 237 (318)
T ss_pred cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHH
Confidence 6667899999999988765 5899999999999999999999877654443210000 000 0000000
Q ss_pred -CCCCCC--CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1032 -PRLPTP--SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1032 -~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...|.+ ......+..+..+++.+++..||.+|+|+.|+++.
T Consensus 238 ~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 238 IQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 011111 11333445567999999999999999999999864
No 23
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-38 Score=350.44 Aligned_cols=241 Identities=25% Similarity=0.468 Sum_probs=195.2
Q ss_pred CCCCceecccCceEEEEEEECC----CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccch--
Q 042958 817 FDDEHCIGKGGQGSVYKAELAS----GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSL-- 890 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l-- 890 (1075)
..+.++||.|.||+||+|+++- ...||||.++.. ..+.++.+|+.|+.+|.++.||||+++.|+....+...
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 3456899999999999997752 357999999875 34456789999999999999999999999987654431
Q ss_pred hheecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 891 AMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 891 ~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
..+++.. ...+.+++.+...+.++||.|++||.+. ++|||||.++|||++.+..+||+|||+++.+.++.
T Consensus 709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 1222221 1234588899999999999999999999 99999999999999999999999999999887665
Q ss_pred C-ceecccc--ccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhcc-CCCCCCCC
Q 042958 964 S-NWTELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEML-DPRLPTPS 1038 (1075)
Q Consensus 964 ~-~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1038 (1075)
. .+++..| +++|.|||.+..++++.+|||||||+||||.|+ |..||...+. ++.+..+. +-++|.|
T Consensus 786 ~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--------QdVIkaIe~gyRLPpP- 856 (996)
T KOG0196|consen 786 EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------QDVIKAIEQGYRLPPP- 856 (996)
T ss_pred CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--------HHHHHHHHhccCCCCC-
Confidence 3 3444444 479999999999999999999999999999997 9999874433 12222222 3466665
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+++..+.++|..||++|-.+||+++||+..|+
T Consensus 857 ---mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lD 889 (996)
T KOG0196|consen 857 ---MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLD 889 (996)
T ss_pred ---CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 466778999999999999999999999998874
No 24
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=368.73 Aligned_cols=506 Identities=34% Similarity=0.418 Sum_probs=362.2
Q ss_pred EEccCCCccCCCCccccccCCCceeecccCcccccCCCCCCCCCCCcEEEccCcccCCCCCccccccCCcceeecccccc
Q 042958 78 LDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRLSSLNYLALYSNYL 157 (1075)
Q Consensus 78 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 157 (1075)
+|.+..++. .||..+-.-..++.|+++.|.+....-+.+.+.-+|+.|||++|+++ ..|..+..+++|+.|.++.|.|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 567777776 78888877777999999999876322233344445999999999998 7899999999999999999999
Q ss_pred cCCCCCCCCCCCCCCEEEcCCCCCCCCCCccccCccccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccc
Q 042958 158 EDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSEL 237 (1075)
Q Consensus 158 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 237 (1075)
..++ ...+++.+|++|.|.+|.+. ..|..+..+.+|++|++++|++. .+|..+..++.+..+..++|..... +
T Consensus 81 ~~vp-~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----l 153 (1081)
T KOG0618|consen 81 RSVP-SSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR----L 153 (1081)
T ss_pred hhCc-hhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh----h
Confidence 8764 67888899999999998887 57788899999999999999997 7888888889999999998832222 2
Q ss_pred cCCCCCCeEeccCCCCCCccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccc
Q 042958 238 GNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLAT 317 (1075)
Q Consensus 238 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 317 (1075)
+... ++.+++..|.+.+.++..+..++. .|+|.+|.+. . ..+..+.+|+.|....|++.... ...++|+.
T Consensus 154 g~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~ 223 (1081)
T KOG0618|consen 154 GQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELE----ISGPSLTA 223 (1081)
T ss_pred cccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceEE----ecCcchhe
Confidence 2222 788888888888888877777665 6888888887 2 34667778888888888877432 22367888
Q ss_pred eecccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCccccCCCcccceeeeccccc
Q 042958 318 LYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKL 397 (1075)
Q Consensus 318 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 397 (1075)
|+.++|.++...+. ..-.+|+++++++|+++ .+|++++.+.+|+.+...+|++ ..+|..+....+|+.|++.+|++
T Consensus 224 L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l-~~lp~ri~~~~~L~~l~~~~nel 299 (1081)
T KOG0618|consen 224 LYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRL-VALPLRISRITSLVSLSAAYNEL 299 (1081)
T ss_pred eeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhH-HhhHHHHhhhhhHHHHHhhhhhh
Confidence 88888887733222 22356777777777777 3557777777777777777777 55666666677777777777777
Q ss_pred cccCChhhccCCCCCeEEeeccccccccccccccccc-cceecccccccccCCCCCCccccccccccccCCccccCCCcc
Q 042958 398 SGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRS-LSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGE 476 (1075)
Q Consensus 398 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 476 (1075)
. -+|.....++.|++|+|..|+|...++..|.-+.. |..|+.+.|++. ..| .++
T Consensus 300 ~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp-~~~---------------------- 354 (1081)
T KOG0618|consen 300 E-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLP-SYE---------------------- 354 (1081)
T ss_pred h-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc-ccc-ccc----------------------
Confidence 5 55556666677777777777776333323333322 555555555554 222 111
Q ss_pred ccCcCCCCEEeCCCCcccCCCcccccCCCccceeeccCCCCCCCCCccccCccccccccccccccccccCCcccccccCC
Q 042958 477 IGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSS 556 (1075)
Q Consensus 477 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~L~Ls~ 556 (1075)
=.....|+.|++.+|.|+...-+.+.+...|++|+|++|++.......+.++..|++|++|+|+++
T Consensus 355 e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-------------- 420 (1081)
T KOG0618|consen 355 ENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-------------- 420 (1081)
T ss_pred chhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh--------------
Confidence 112334555555566665555556666777777777777765444445667777777777777665
Q ss_pred CccccccchhhhhhhHhHHHhhcccccccccccccCcccccceeecCCCcccC-cccccccccccceEEEcccccccccc
Q 042958 557 NHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSN-SIPKSFGNLVKLHYLNLSNNQFSRGI 635 (1075)
Q Consensus 557 N~l~~~~p~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~ 635 (1075)
.+|.++..+..|+.|....|++. ..| .+..+++|+.+|+|.|.|+. .+|..... ++|++|||++|.-...-
T Consensus 421 -----~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~l~~d 492 (1081)
T KOG0618|consen 421 -----TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTRLVFD 492 (1081)
T ss_pred -----hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcccccc
Confidence 67889999999999999999998 556 79999999999999999986 44444443 89999999999743334
Q ss_pred chhcccccccceeeeccc
Q 042958 636 PIKLEELIHLSELDLSHN 653 (1075)
Q Consensus 636 p~~~~~l~~L~~L~ls~N 653 (1075)
-..|..+.++...++.-|
T Consensus 493 ~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 493 HKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhhhHHhhhhhheecccC
Confidence 456667777777777666
No 25
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-37 Score=329.40 Aligned_cols=254 Identities=26% Similarity=0.388 Sum_probs=194.1
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecc-ccchh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHV-RHSLA 891 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~l~ 891 (1075)
.+.|+..++||+|.||.||+| +..+|+.||+|++...... .....-..+||.+|+++.||||+++.+...+. ...++
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 456777788999999999999 6678999999999765432 33356678999999999999999999988776 33444
Q ss_pred heecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 892 MILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 892 ~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+++++.. .+..++..++..+++|++.||+|+|.+ +|+|||||.+|||+|.+|.+||+|||+|+++...
T Consensus 195 lVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 195 LVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 4443322 244689999999999999999999999 9999999999999999999999999999988766
Q ss_pred CC-ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchh--------hhhh----hhh-
Q 042958 963 SS-NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSL--------NLNI----ALD- 1027 (1075)
Q Consensus 963 ~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~--------~~~~----~~~- 1027 (1075)
.. .++..+.|.+|+|||.+.|. .|+.++|+||.|||+.||+.|++.|.+-...+.... .... .+.
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~ 351 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH 351 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence 54 47888999999999988865 699999999999999999999999875433211000 0000 000
Q ss_pred -hccCCCCCCCC---cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 -EMLDPRLPTPS---CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 -~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+..+... +.....+....+++..++..||.+|.||.++++
T Consensus 352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 01111111000 011122456789999999999999999999875
No 26
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-37 Score=325.43 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=198.4
Q ss_pred HHhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccc
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 889 (1075)
...++|...++||.|.||.||+| ...+|+.||||+++..... ++ .-.=.+|+..++++. |||||++.+++.+.+..
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~e-e~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WE-ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HH-HHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 34577888999999999999999 5568999999999875433 22 233468999999998 99999999999887643
Q ss_pred hhheecC---------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 890 LAMILSN---------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 890 l~~~~~~---------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
+..+++. ......+++..++.|++||++||+|+|++ |+.|||+||+|||+.....+||+|||+|+.+.
T Consensus 85 L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 85 LYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred EeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 3333221 12377899999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCceeccccccCccCcccc-ccCCCCcccchHhHHHHHHHHHhCCCCCCccCcccc-------------chhhhhhhh
Q 042958 961 PDSSNWTELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSS-------------SSLNLNIAL 1026 (1075)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~-------------~~~~~~~~~ 1026 (1075)
. ...++..+.|.+|+|||++ +.+-|+.+.|+||+|||++|+.+-++-|.+.+..+. ........+
T Consensus 162 S-kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 162 S-KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred c-CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence 4 3557788999999999976 466789999999999999999999988876544321 111111222
Q ss_pred hhccCCCCCCCCc-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1027 DEMLDPRLPTPSC-----IVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1027 ~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...+.-+++.... .....+.+..+++.+|++.||++||||+|.++.
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 3333333333211 122356789999999999999999999999874
No 27
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=323.69 Aligned_cols=244 Identities=27% Similarity=0.433 Sum_probs=185.5
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-chh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-SLA 891 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~l~ 891 (1075)
..++...+.||+|+||.||++... +|+..|||.+...... ..+.+.+|+.+|++++|||||+++|....... .+.
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~---~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP---TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccch---hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 345677899999999999999554 5999999998765211 15678999999999999999999997444333 334
Q ss_pred heecCccc----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC-CCCceEeccccccccC
Q 042958 892 MILSNNAA----------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF-DNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 892 ~~~~~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~ 960 (1075)
.++++..+ +..+++...++++.||++||+|||++ +||||||||+|||++. ++.+||+|||.++...
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 44443321 12689999999999999999999999 9999999999999999 7999999999998766
Q ss_pred CC---CCceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCC
Q 042958 961 PD---SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPT 1036 (1075)
Q Consensus 961 ~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1075)
.. ........||+.|||||++..+ ...+++||||+||++.||+||+.||... .... ............|
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~----~~~~~ig~~~~~P- 242 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEA----EALLLIGREDSLP- 242 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchH----HHHHHHhccCCCC-
Confidence 31 1223457899999999999853 3446999999999999999999998742 0000 1111111111122
Q ss_pred CCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1037 PSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1037 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..+...+.+..+++.+|+++||++||||+|+++-
T Consensus 243 --~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 243 --EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred --CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 1223345568999999999999999999999864
No 28
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-36 Score=315.93 Aligned_cols=252 Identities=25% Similarity=0.356 Sum_probs=192.4
Q ss_pred HhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
..++|+..+.||.|..++||+| ....++.||||++........ .+.+.+|+..|+.++||||++++..|...+..+.
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 3578999999999999999999 456789999999987654432 6889999999999999999999998877665544
Q ss_pred heecC-cc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 892 MILSN-NA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 892 ~~~~~-~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+.-.. .+ -...+.+..+..|.+++++||.|||++ |.||||||+.|||++.+|.+||+|||.+..+..
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 33111 11 022377888889999999999999999 999999999999999999999999999877665
Q ss_pred CCCce----eccccccCccCcccccc--CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCC
Q 042958 962 DSSNW----TELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLP 1035 (1075)
Q Consensus 962 ~~~~~----~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1075)
..... ...+||+.|||||++.. ..|+.|+||||||++..|+.+|+.||...++...-....+...........
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~- 257 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGL- 257 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccC-
Confidence 54322 44689999999999543 469999999999999999999999998666543211111111000000000
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+.+........+.+++..|+++||++|||++++++
T Consensus 258 -~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 258 -DKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred -ChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 11112234457999999999999999999999875
No 29
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=329.95 Aligned_cols=243 Identities=23% Similarity=0.392 Sum_probs=196.8
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
...|+...+||+|+.|.||.| +..+++.||||++....... ++-+..|+.+|+..+|+|||.+++.|...+..+.+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 357788889999999999999 56689999999997654332 46688999999999999999999977665544333
Q ss_pred e-ecCcc------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 893 I-LSNNA------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 893 ~-~~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
+ +.+.+ ....+++.++..|++++++||+|||.. +|+|||||.+|||++.+|.+||+|||++..+......
T Consensus 349 MEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K 425 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK 425 (550)
T ss_pred EeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccCc
Confidence 2 22221 123467889999999999999999999 9999999999999999999999999999999888778
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
..+.+||++|||||+.....|++|+||||+|++++||+.|.+||-...+...-. .+..--.+++. .....+
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly-----LIa~ng~P~lk----~~~klS 496 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----LIATNGTPKLK----NPEKLS 496 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHH-----HHhhcCCCCcC----CccccC
Confidence 888999999999999999999999999999999999999999986433221111 11111112222 233455
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+.+|+.+|++.||++||++.|+++
T Consensus 497 ~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 497 PELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 67999999999999999999999986
No 30
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=318.73 Aligned_cols=242 Identities=25% Similarity=0.416 Sum_probs=194.9
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
...|+..+.||+|.||.||+| +..+++.||+|++...... ...+++.+|+.++.+.+++||.++||.+......+..
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~--deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE--DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcc--hhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence 456777899999999999999 6668999999999876433 3467889999999999999999999988765543332
Q ss_pred e-ecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 893 I-LSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 893 ~-~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+ +...+ .+..+.+....-|..++..|+.|+|.+ +.+|||||+.||++.++|.+|++|||.+..+.....
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence 2 22211 123346666677899999999999999 999999999999999999999999999998877666
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
...+.+||+.|||||++.+..|+.|+||||+|++.+||.+|.+|+....++. ..-.+....| |. .....
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr---------vlflIpk~~P-P~-L~~~~ 235 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR---------VLFLIPKSAP-PR-LDGDF 235 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce---------EEEeccCCCC-Cc-ccccc
Confidence 6678999999999999999899999999999999999999999987554421 1111122222 11 22356
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+..+.+++..|+.+||+.||+|.++++
T Consensus 236 S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 236 SPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 677999999999999999999999986
No 31
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=325.72 Aligned_cols=232 Identities=30% Similarity=0.504 Sum_probs=188.2
Q ss_pred CCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc
Q 042958 818 DDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN 897 (1075)
Q Consensus 818 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~ 897 (1075)
...+.+|.|+-|.||.|+++ ++.||||+++. .-+.+|+-|++++||||+.|.|+|.... .+++++++.
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsP-cyCIiMEfC 194 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSP-CYCIIMEFC 194 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCc-eeEEeeecc
Confidence 44578999999999999998 89999998742 2246899999999999999999997643 333443332
Q ss_pred c---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceec
Q 042958 898 A---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE 968 (1075)
Q Consensus 898 ~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 968 (1075)
. .+..+.-.....|.++||.|+.|||.+ .|||||||+-|||++.+..+||+|||-++....- +..-.
T Consensus 195 a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMS 270 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMS 270 (904)
T ss_pred ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhh
Confidence 2 245567777789999999999999999 9999999999999999999999999999876644 44455
Q ss_pred cccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHH
Q 042958 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048 (1075)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1048 (1075)
++||..|||||+++..+.++|+||||||||||||+||..||...+............+ .++-| ..++..+
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL------~LpvP----stcP~Gf 340 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSL------HLPVP----STCPDGF 340 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcc------cccCc----ccCchHH
Confidence 8999999999999999999999999999999999999999986655433322222111 22332 3445568
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhhhcC
Q 042958 1049 VEVAISCLDENPESRPTMPKVSQLLKI 1075 (1075)
Q Consensus 1049 ~~li~~cl~~dP~~RPs~~evl~~L~i 1075 (1075)
.-++++||+..|..||++.+++.-|+|
T Consensus 341 klL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 341 KLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 999999999999999999999998876
No 32
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=351.96 Aligned_cols=244 Identities=25% Similarity=0.428 Sum_probs=192.3
Q ss_pred hcCCCCCceecccCceEEEEEEEC--CCC----EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA--SGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~--~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
....+..+.||+|+||.||+|... +|. .||||.+... .+.+...+|.+|..+|+.++|||||+++|+|.+..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 345556788999999999999664 343 4899988764 44556789999999999999999999999998844
Q ss_pred cchhheecCcc----------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEe
Q 042958 888 HSLAMILSNNA----------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVS 951 (1075)
Q Consensus 888 ~~l~~~~~~~~----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 951 (1075)
..+. ++++.. +...++..+...++.|||+|+.||++. ++|||||.++|+|+++...+||+
T Consensus 769 ~~~i-~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 769 PPLI-LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred CcEE-EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 4322 222211 134577888899999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCcee-cc-ccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhh
Q 042958 952 DFGIAKFLKPDSSNWT-EL-AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDE 1028 (1075)
Q Consensus 952 DfGla~~~~~~~~~~~-~~-~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1075)
|||+|+.+...+.... .. .-..+|||||++..+.++.|+|||||||++||++| |..||...+. .+.....
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-------~~v~~~~ 917 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-------FEVLLDV 917 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-------HHHHHHH
Confidence 9999996544333222 12 23579999999999999999999999999999998 9999864332 1222234
Q ss_pred ccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
....+++.|..++. .++++|.+||+.+|++||++..+++.++
T Consensus 918 ~~ggRL~~P~~CP~----~ly~lM~~CW~~~pe~RP~F~~i~~q~~ 959 (1025)
T KOG1095|consen 918 LEGGRLDPPSYCPE----KLYQLMLQCWKHDPEDRPSFRTIVEQDP 959 (1025)
T ss_pred HhCCccCCCCCCCh----HHHHHHHHHccCChhhCccHHHHHhhhh
Confidence 44557777654444 5899999999999999999999998653
No 33
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.8e-35 Score=335.83 Aligned_cols=247 Identities=23% Similarity=0.378 Sum_probs=186.9
Q ss_pred HhcCCCCCceecccCceEEEEEEE------CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeec
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL------ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH 885 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 885 (1075)
..++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++.+ +||||++++++|..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 457899999999999999999953 235789999987532 223356789999999999 89999999998876
Q ss_pred cccchhheecCccc------------------------------------------------------------------
Q 042958 886 VRHSLAMILSNNAA------------------------------------------------------------------ 899 (1075)
Q Consensus 886 ~~~~l~~~~~~~~~------------------------------------------------------------------ 899 (1075)
....+.+++++...
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 54433222211110
Q ss_pred -----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc--eeccccc
Q 042958 900 -----AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGT 972 (1075)
Q Consensus 900 -----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt 972 (1075)
...+++.+..+++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .....++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 13477888899999999999999999 9999999999999999999999999999865433221 1233456
Q ss_pred cCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHH
Q 042958 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEV 1051 (1075)
Q Consensus 973 ~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 1051 (1075)
+.|+|||++.+..++.++||||||+++|||++ |+.||........ ....+.+...... ....+..+.++
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-------~~~~~~~~~~~~~---~~~~~~~l~~l 309 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-------FCQRLKDGTRMRA---PENATPEIYRI 309 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-------HHHHHhcCCCCCC---CCCCCHHHHHH
Confidence 78999999999899999999999999999997 9999875332110 0111111111110 11234468999
Q ss_pred HHHccCCCCCCCCCHHHHHhhhc
Q 042958 1052 AISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1052 i~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+.+||+.||++|||+.||++.|+
T Consensus 310 i~~cl~~dp~~RPs~~el~~~l~ 332 (338)
T cd05102 310 MLACWQGDPKERPTFSALVEILG 332 (338)
T ss_pred HHHHccCChhhCcCHHHHHHHHH
Confidence 99999999999999999999885
No 34
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=327.02 Aligned_cols=245 Identities=21% Similarity=0.349 Sum_probs=197.7
Q ss_pred HHhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCC-c-hhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccc
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPG-E-MTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVR 887 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~-~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 887 (1075)
.....|...+.||+|+||+||.| ...+|+.||+|++...... . ....+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34578999999999999999999 4457899999977653211 1 123456778999999998 999999999998877
Q ss_pred cchhheecCccc---------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC-CCceEecccccc
Q 042958 888 HSLAMILSNNAA---------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIAK 957 (1075)
Q Consensus 888 ~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla~ 957 (1075)
. +++++++..+ ...+.+.+..+++.|++.|++|+|++ +|+||||||+||+++.+ +++||+|||++.
T Consensus 94 ~-~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 94 K-IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred e-EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 6 4444444333 35678888999999999999999999 99999999999999999 999999999999
Q ss_pred ccCCCCCceeccccccCccCccccccCC-CC-cccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCC
Q 042958 958 FLKPDSSNWTELAGTYGYVAPELAYTMK-VT-EKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLP 1035 (1075)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1075)
..........+.+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+... .......+....+.
T Consensus 170 ~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~--------~~~l~~ki~~~~~~ 241 (370)
T KOG0583|consen 170 ISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN--------VPNLYRKIRKGEFK 241 (370)
T ss_pred ccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc--------HHHHHHHHhcCCcc
Confidence 8753445667789999999999999987 86 78999999999999999999998522 12222334444444
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.|.... +.++..++.+|+..||.+|+|+.||++
T Consensus 242 ~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 242 IPSYLL---SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred CCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 443221 556999999999999999999999973
No 35
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=293.81 Aligned_cols=230 Identities=24% Similarity=0.337 Sum_probs=193.1
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||.|+||.|..++.+ +|..+|+|++.+...-...+.+....|..+++.+.||+++++++.|.+.+. +.++
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~-lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSN-LYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCe-EEEE
Confidence 56888899999999999999665 688999999988766666677889999999999999999999998887554 4455
Q ss_pred ecCcccc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNAAA---------KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++...++ ++++....+-+|.||+.|++|||+. .|++||+||+|||+|.+|.+||+|||.|+.....
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-- 197 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-- 197 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc--
Confidence 5444443 4566677788999999999999999 9999999999999999999999999999987643
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
.-+.+|||.|+|||.+...++..++|.|||||++|||+.|..||..... -...+++...++..|.....
T Consensus 198 -T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~v~fP~~fs~-- 266 (355)
T KOG0616|consen 198 -TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGKVKFPSYFSS-- 266 (355)
T ss_pred -EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCcccCCcccCH--
Confidence 4568999999999999999999999999999999999999999974333 23445666666665544333
Q ss_pred HHHHHHHHHHccCCCCCCC
Q 042958 1045 LISIVEVAISCLDENPESR 1063 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~R 1063 (1075)
++.+++...++.|-.+|
T Consensus 267 --~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 267 --DAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --HHHHHHHHHHhhhhHhh
Confidence 48999999999999888
No 36
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=328.67 Aligned_cols=247 Identities=27% Similarity=0.418 Sum_probs=190.5
Q ss_pred HhcCCCCCceecccCceEEEEEEECC--C---CEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELAS--G---EIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
.-++....++||+|+||.||+|+++. + ..||||..+...........+|..|+++|+.++|||||++||++....
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 34455566899999999999996543 3 238999988644345667899999999999999999999999998765
Q ss_pred cchhh-eecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 888 HSLAM-ILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 888 ~~l~~-~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
..+.+ .+...+ ....++..++.+++.++|.||+|||+. +++||||.++|+|++.++.+||+|||+++.
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccC
Confidence 54333 332221 123589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhc-c-CCCCC
Q 042958 959 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEM-L-DPRLP 1035 (1075)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 1035 (1075)
............-+.+|+|||.+....|++++|||||||++||+++ |..||...... .....+ . ..+.+
T Consensus 312 ~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--------~v~~kI~~~~~r~~ 383 (474)
T KOG0194|consen 312 GSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--------EVKAKIVKNGYRMP 383 (474)
T ss_pred CcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--------HHHHHHHhcCccCC
Confidence 4311111112235689999999999999999999999999999998 89998754332 111222 1 12222
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+. ..+..+..++.+||..||++||+|.++.+.++
T Consensus 384 ~~~----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 384 IPS----KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CCC----CCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 222 34456899999999999999999999999875
No 37
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.7e-37 Score=333.97 Aligned_cols=337 Identities=30% Similarity=0.430 Sum_probs=224.7
Q ss_pred CccCcEEEccCCCCC-CCcCCCCCccccccceecccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCccee
Q 042958 288 LRSLSMLNLGYNKLN-GIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATL 366 (1075)
Q Consensus 288 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L 366 (1075)
++-.+-.|+++|.++ +..|.....+++++.|.|...++. .+|+.++.+.+|++|.+++|++. .+...++.++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 344556677777777 456777777777888877777777 67788888888888888888877 566677788888888
Q ss_pred eccccccCCC-CccccCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccccccccccccccccceeccccccc
Q 042958 367 YLYSNSLFDS-IPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKL 445 (1075)
Q Consensus 367 ~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 445 (1075)
.+..|++... +|..+..+..|+.||||+|++. ..|..+..-+++-.|+||+|+|..++...|.++..|-.||||+|++
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh
Confidence 8888887544 6777788888888888888886 7788888888888888888888866666778888888888888888
Q ss_pred ccCCCCCCccccccccccccCCccccCCCccccCcCCCCEEeCCCCccc-CCCcccccCCCccceeeccCCCCCCCCCcc
Q 042958 446 SGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLS-GSIPQSLGNLSNLVILYLYNNSLFDSIPSE 524 (1075)
Q Consensus 446 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 524 (1075)
. .+|..+.+|..|+.|.|++|.+...--..+..+++|+.|++++.+=+ ..+|.++..+.+|..+|||.|.+. .+|+.
T Consensus 163 e-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPec 240 (1255)
T KOG0444|consen 163 E-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPEC 240 (1255)
T ss_pred h-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHH
Confidence 7 66777788888888888888776544455566777777787776532 346777777777777777777773 56677
Q ss_pred ccCcccccccccccccccc-----ccCCcccccccCCCccccccchhhhhhhHhHHHhhccccccc-ccccccCcccccc
Q 042958 525 LGNLRSLSMLSFAYNKLSG-----SIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSG-QLSPKLGSLAQLE 598 (1075)
Q Consensus 525 l~~l~~L~~L~l~~N~l~~-----~~p~~l~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~ 598 (1075)
+.++++|+.|+||+|+|+. ..-..+++|+||+|+++ .+|.++++++.|++|.+.+|+++- -+|..++.+.+|+
T Consensus 241 ly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Le 319 (1255)
T KOG0444|consen 241 LYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLE 319 (1255)
T ss_pred HhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhH
Confidence 7777777777777776652 01123444444444444 444444444444444444444441 1333344444444
Q ss_pred eeecCCCcccCcccccccccccceEEEcccccc
Q 042958 599 HLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQF 631 (1075)
Q Consensus 599 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 631 (1075)
.+..++|.+. ..|+.+..+.+|+.|.|++|++
T Consensus 320 vf~aanN~LE-lVPEglcRC~kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 320 VFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRL 351 (1255)
T ss_pred HHHhhccccc-cCchhhhhhHHHHHhcccccce
Confidence 4444444443 3444444444444444444443
No 38
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-35 Score=317.38 Aligned_cols=244 Identities=25% Similarity=0.406 Sum_probs=196.0
Q ss_pred hcCCCCCceecccCceEEEEEEECC---CC--EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELAS---GE--IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~---g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
.+..+..++||+|-||.||+|.+.+ |+ .||||+.+..- ..+..+.|..|..+|+.++||||++++|+|.+...
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~ 465 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPM 465 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeeccce
Confidence 3445566899999999999995532 33 58999988643 23346889999999999999999999999998887
Q ss_pred chhheecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 SLAMILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 ~l~~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
.+.|.+...+ ....++......+++||+.||+|||+. .+|||||..+|||+.....+|++|||+++.+.
T Consensus 466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 7777665432 234567777788999999999999999 99999999999999999999999999999988
Q ss_pred CCCCce-eccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhcc-CCCCCCC
Q 042958 961 PDSSNW-TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEML-DPRLPTP 1037 (1075)
Q Consensus 961 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1037 (1075)
.+.... +...-++.|||||.+.-++++.++|||.|||+|||++. |..||.+....+.. ..+. ..++|.|
T Consensus 543 d~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI--------~~iEnGeRlP~P 614 (974)
T KOG4257|consen 543 DDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI--------GHIENGERLPCP 614 (974)
T ss_pred ccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE--------EEecCCCCCCCC
Confidence 665432 22334679999999999999999999999999999996 99999865543221 1111 2345544
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+.+++.++.++.+||++||.+||.+.|+...|.
T Consensus 615 ----~nCPp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 615 ----PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred ----CCCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 345567999999999999999999999988763
No 39
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-35 Score=325.47 Aligned_cols=240 Identities=21% Similarity=0.293 Sum_probs=199.1
Q ss_pred HHhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccc
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 889 (1075)
...++|...++||+|.||+|+.|..+ +++.+|||++++...-..+..+..+.|.+++... +||.++.++..|+..++.
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34578999999999999999999665 6899999999987666666678889999998888 599999999998887665
Q ss_pred hhheecC-------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 890 LAMILSN-------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 890 l~~~~~~-------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+.++.+- ....+.++..+..-+|..|+.||.|||++ +|||||||.+|||+|.+|.+||+|||+++.-...
T Consensus 445 ~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCCC
Confidence 4333221 12245678888999999999999999999 9999999999999999999999999999976655
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
.....+.+||+.|||||++.++.|+.++|.|||||+||||+.|+.||.+.+. .+..+.++......| .
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE--------ee~FdsI~~d~~~yP----~ 589 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE--------EEVFDSIVNDEVRYP----R 589 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHhcCCCCCC----C
Confidence 5667789999999999999999999999999999999999999999974332 334445544444433 3
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH
Q 042958 1043 DKLISIVEVAISCLDENPESRPTM 1066 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~ 1066 (1075)
..+.+.+.++++++.++|++|--+
T Consensus 590 ~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 590 FLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred cccHHHHHHHHHHhccCcccccCC
Confidence 345568999999999999999866
No 40
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=306.78 Aligned_cols=251 Identities=26% Similarity=0.408 Sum_probs=183.0
Q ss_pred cCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC--CcCceeeEEEEeeccccc---
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI--RHRNIVKFYGFCSHVRHS--- 889 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~--- 889 (1075)
...+..+++|+|.||.||||.+. ++.||||++.. +..+.|..|.++++.. +|+||++|+++-......
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 44555678999999999999987 69999999853 2356788888887765 899999999987554421
Q ss_pred --hhheecCc------cccCCCCHHHHHHHHHHHHHHHHHHHhCCC------CCeEEecCCCCCeeeCCCCCceEecccc
Q 042958 890 --LAMILSNN------AAAKDLGWTRRMNVIKGISDALSYMHNDCF------PPIVHRDISSKNVLLDFDNEAHVSDFGI 955 (1075)
Q Consensus 890 --l~~~~~~~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~------~~ivH~Dlk~~Nill~~~~~~kl~DfGl 955 (1075)
++..++.. -....++|....+|+..+++||+|||+... |+|+|||||++|||+..|+++.|+|||+
T Consensus 283 ywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 12222221 235668999999999999999999998643 7899999999999999999999999999
Q ss_pred ccccCCCCC--ceeccccccCccCccccccCCC------CcccchHhHHHHHHHHHhCCCCCCc--cCcc----------
Q 042958 956 AKFLKPDSS--NWTELAGTYGYVAPELAYTMKV------TEKCDVYSFGVLALEVIKGKHPRDF--ISSM---------- 1015 (1075)
Q Consensus 956 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~------~~~~Dv~s~G~vl~elltg~~p~~~--~~~~---------- 1015 (1075)
|..+.+... .....+||.+|||||++.+..- -.+.||||+|.|+|||++.-.-++. .+..
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 998876543 2334789999999999987531 2368999999999999985543321 1110
Q ss_pred -ccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1016 -SSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1016 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
............+-..|.++...... .....+.+.+..||..||+.|.|+.-|.+.+
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 01111111222233334444332222 4456799999999999999999999887754
No 41
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-35 Score=287.97 Aligned_cols=241 Identities=27% Similarity=0.394 Sum_probs=197.3
Q ss_pred HhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
+-++|++++.||+|-||.||.|+. +++-.||+|++.+..........++.+|+++-+.++||||+++|+||.+....+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 347899999999999999999955 5688999999977655555556789999999999999999999999987654332
Q ss_pred heecCc-----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 892 MILSNN-----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 892 ~~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
. +++. .....++......++.|+|.|+.|+|.. +|+||||||+|+|++.++..|++|||.+....
T Consensus 100 i-lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 100 I-LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred E-EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 2 2222 1345577778889999999999999999 99999999999999999999999999998644
Q ss_pred CCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcC
Q 042958 961 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCI 1040 (1075)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1075)
.....+.+||..|.|||...+..++.++|+|++|++.||++.|.+||.... ..+..+++...++..|.
T Consensus 176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--------~~etYkrI~k~~~~~p~-- 243 (281)
T KOG0580|consen 176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--------HSETYKRIRKVDLKFPS-- 243 (281)
T ss_pred --CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--------hHHHHHHHHHccccCCc--
Confidence 455677899999999999999999999999999999999999999997322 22233344434444332
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+.+..++|.+|+.++|.+|.+..||++
T Consensus 244 --~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 244 --TISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred --ccChhHHHHHHHHhccCccccccHHHHhh
Confidence 23345899999999999999999999986
No 42
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=306.99 Aligned_cols=247 Identities=23% Similarity=0.339 Sum_probs=191.9
Q ss_pred HHhcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCC-------c----hhHHHHHHHHHHHHhcCCcCceeeE
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPG-------E----MTFQQEFLNEVKALTEIRHRNIVKF 879 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~-------~----~~~~~~~~~E~~~l~~l~h~niv~l 879 (1075)
..-++|++.+.||+|.||.|-+|+ ..+++.||||++.+.... . ....+...+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 445789999999999999999994 457999999998653210 0 1113578899999999999999999
Q ss_pred EEEeeccccc-hhheecCcc--------ccCC-CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCce
Q 042958 880 YGFCSHVRHS-LAMILSNNA--------AAKD-LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAH 949 (1075)
Q Consensus 880 ~~~~~~~~~~-l~~~~~~~~--------~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 949 (1075)
+++-.++... +++++++.. .... ++..+.++++.++..||+|||.+ +||||||||+|+|++++|++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEE
Confidence 9988665432 333332221 1223 88999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCC-----CCceeccccccCccCccccccCC----CCcccchHhHHHHHHHHHhCCCCCCccCccccchh
Q 042958 950 VSDFGIAKFLKPD-----SSNWTELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSL 1020 (1075)
Q Consensus 950 l~DfGla~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~ 1020 (1075)
|+|||.+...... .......+|||.|+|||...+.. .+.+.||||+||++|.++.|+.||-...
T Consensus 251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~------- 323 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF------- 323 (576)
T ss_pred eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch-------
Confidence 9999999876322 22234478999999999887632 3568899999999999999999986321
Q ss_pred hhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1021 NLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.....++++...+..|. ..+....+.+++++++.+||++|.+..||..
T Consensus 324 -~~~l~~KIvn~pL~fP~--~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 324 -ELELFDKIVNDPLEFPE--NPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred -HHHHHHHHhcCcccCCC--cccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 23345566665554442 2345567999999999999999999999864
No 43
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3e-37 Score=334.64 Aligned_cols=365 Identities=30% Similarity=0.447 Sum_probs=282.0
Q ss_pred cCCcceeeccccccc-CCCCCCCCCCCCCCEEEcCCCCCCCCCCccccCccccceEeeeccccccccCCCCcCCCCcCce
Q 042958 144 LSSLNYLALYSNYLE-DLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATL 222 (1075)
Q Consensus 144 l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 222 (1075)
|+-.+-.|+++|.++ +..|.....+++++.|.|.+.++. .+|+.++.+.+|++|.+++|++. .+...++.++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 334456678888887 566777788888888888888886 47777888888888888888887 566677788888888
Q ss_pred eccccCCCC-CCcccccCCCCCCeEeccCCCCCCccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCC
Q 042958 223 YLHNNSLFD-SIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKL 301 (1075)
Q Consensus 223 ~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 301 (1075)
.+.+|++.. -+|..+..+..|++||||+|+++ ..|..+...+++-.|+|++|+|..++...|.+++.|-+||||+|++
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchh
Confidence 888887742 36777778888888888888888 7788888888888888888888854445667788888888888888
Q ss_pred CCCcCCCCCccccccceecccccccCCCCcccccccccccccccCCccc-ccCCCcCCCCCCcceeeccccccCCCCccc
Q 042958 302 NGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLS-GSIPPSLGYLSNLATLYLYSNSLFDSIPSE 380 (1075)
Q Consensus 302 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~ 380 (1075)
. .+|.....+.+|++|+|++|.+....-..+..+++|+.|.+++.+-+ ..+|.++..+.+|..+|++.|.+ ..+|+.
T Consensus 163 e-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~L-p~vPec 240 (1255)
T KOG0444|consen 163 E-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNL-PIVPEC 240 (1255)
T ss_pred h-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCC-CcchHH
Confidence 7 45667778888888888888876555555666777888888876533 35777888888888888888887 567888
Q ss_pred cCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccccccccccccccccceecccccccc-cCCCCCCcccccc
Q 042958 381 LGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLS-GSIPHSLGNLTNL 459 (1075)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L 459 (1075)
+.++++|+.|+||+|+|+ .+.-..+.+.+|++|+||.|+++ ..|+++..+++|+.|++.+|+++ .-+|..+++|.+|
T Consensus 241 ly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~L 318 (1255)
T KOG0444|consen 241 LYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQL 318 (1255)
T ss_pred HhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhh
Confidence 888888888888888886 55556667778888888888887 67788888888888888888876 2367788888888
Q ss_pred ccccccCCccccCCCccccCcCCCCEEeCCCCcccCCCcccccCCCccceeeccCCCC
Q 042958 460 DALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSL 517 (1075)
Q Consensus 460 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 517 (1075)
+++..++|.+. .+|+.++.+..|+.|.|+.|++. .+|+.+.-++.|+.|||.+|.=
T Consensus 319 evf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 319 EVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred HHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 88888888887 77888888888888888888876 5788888888888888887754
No 44
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=314.68 Aligned_cols=237 Identities=22% Similarity=0.323 Sum_probs=184.6
Q ss_pred CceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeec--ccc-chhheecC
Q 042958 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH--VRH-SLAMILSN 896 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~-~l~~~~~~ 896 (1075)
...||+|++|.||+|.. +|+.||||++...........+.|.+|+.++++++||||++++|++.+ .+. .+.++++.
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999988 499999999986544444446788999999999999999999999876 222 22222222
Q ss_pred cc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee
Q 042958 897 NA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT 967 (1075)
Q Consensus 897 ~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 967 (1075)
.. ....++|..+.+++.|++.|+.|||+.. +++||||||+||+++.++.+||+|||+++.+.... .
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---~ 178 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---F 178 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---c
Confidence 11 2346789999999999999999999842 77899999999999999999999999998654321 2
Q ss_pred ccccccCccCcccccc--CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhcc--CCCCCCCCcCcHH
Q 042958 968 ELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEML--DPRLPTPSCIVQD 1043 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 1043 (1075)
...|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+. ..+.+.+ ..
T Consensus 179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~~~~~----~~ 246 (283)
T PHA02988 179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--------EIYDLIINKNNSLKLP----LD 246 (283)
T ss_pred cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcCCCCCCC----Cc
Confidence 3468899999999876 67899999999999999999999999743221 1111111 1122211 13
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+..+.+++.+||+.||++|||++||++.|+
T Consensus 247 ~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 247 CPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred CcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 4556999999999999999999999999886
No 45
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=301.25 Aligned_cols=256 Identities=26% Similarity=0.360 Sum_probs=191.6
Q ss_pred HHhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc--
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-- 888 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 888 (1075)
.....|...+.||+|+||.|+.| ...+|+.||||++..+... ....++..+|+++++.++|+||+.+.+.+..+..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~-~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFEN-QIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhc-hHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 34456666788999999999999 5568999999999765433 3345778899999999999999999998865211
Q ss_pred ----chhheecC------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 889 ----SLAMILSN------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 889 ----~l~~~~~~------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
++++.+.+ ...+..++......+.+|+++||+|+|+. +|+|||+||+|++++++..+||+|||+|+.
T Consensus 98 f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred cceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceee
Confidence 11111211 12345588899999999999999999999 999999999999999999999999999998
Q ss_pred cCCC--CCceeccccccCccCccccc-cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchh---------------
Q 042958 959 LKPD--SSNWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSL--------------- 1020 (1075)
Q Consensus 959 ~~~~--~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~--------------- 1020 (1075)
..+. ...++..+.|.+|+|||.+. ...|+.+.||||.||++.||++|+.-|.+.+....-..
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~ 254 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQK 254 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHH
Confidence 8642 34467788999999999764 56799999999999999999999999876543321000
Q ss_pred hhhhhhhhccC--CCCCC-C-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1021 NLNIALDEMLD--PRLPT-P-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1021 ~~~~~~~~~~~--~~~~~-~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
........++. +..+. + ....+...+...+++.+|+..||.+|+|++|.++
T Consensus 255 i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 255 IRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred hccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000111111 11111 1 1122344567899999999999999999999875
No 46
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-34 Score=293.36 Aligned_cols=254 Identities=22% Similarity=0.260 Sum_probs=189.9
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc---c
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH---S 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~ 889 (1075)
.++|+..+.|++|+||.||+| +.++++.||+|+++.....+ -..-.-.+|+.++.+.+|||||.+-++...... +
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-GFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccC-CCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 456788899999999999999 55689999999998654222 222346799999999999999999887654332 2
Q ss_pred hhheecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 890 LAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 890 l~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
++|.+.+. ...+++...+..-++.|+++|++|||.. .|+|||||++|+|++..|.+||+|||+|+.++.+
T Consensus 154 ~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 154 IVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 22221111 2246788889999999999999999999 8999999999999999999999999999999988
Q ss_pred CCceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccch----------------hhhhhh
Q 042958 963 SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSS----------------LNLNIA 1025 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~----------------~~~~~~ 1025 (1075)
...++..+.|.+|+|||.+.+. .|+.+.|+||+|||+.|++++++-|.+.+..+... ...--.
T Consensus 231 ~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~ 310 (419)
T KOG0663|consen 231 LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPA 310 (419)
T ss_pred cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccch
Confidence 8888889999999999988775 58999999999999999999998887544332100 000000
Q ss_pred hhhccCCCCCCCC--cCcHH--HHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1026 LDEMLDPRLPTPS--CIVQD--KLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1026 ~~~~~~~~~~~~~--~~~~~--~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+..+..+... ..... -...-.+++...+..||++|.||+|.++
T Consensus 311 ~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 311 VKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred hhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0001111111000 00001 1245778999999999999999999875
No 47
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-34 Score=308.59 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=190.1
Q ss_pred hcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh-
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM- 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~- 892 (1075)
.....+.++||+|-||+|..+....+..||||+++... ....+.+|.+|+++|.+++|||||+++|+|..++....+
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 34556678999999999999988878999999998653 344468999999999999999999999999876654222
Q ss_pred -eecCccc--------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 -ILSNNAA--------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 -~~~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+++...- .....-....+|+.|||.|++||.+. .+||||+.++|+|+|.++++||+|||+++-+-..+
T Consensus 615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCC
Confidence 2222110 11123445578999999999999999 99999999999999999999999999999655443
Q ss_pred Cce--eccccccCccCccccccCCCCcccchHhHHHHHHHHHh--CCCCCCccCccccchhhhhhhhhhccCCC-CCCCC
Q 042958 964 SNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFISSMSSSSLNLNIALDEMLDPR-LPTPS 1038 (1075)
Q Consensus 964 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1038 (1075)
... ...+-+++|||||.+.-++++.++|||+||+++||+++ ...||...... +..+...++.+.. .....
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e-----~vven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE-----QVVENAGEFFRDQGRQVVL 766 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH-----HHHHhhhhhcCCCCcceec
Confidence 321 22345789999999999999999999999999999885 78898644332 2222222333221 11111
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
..+.-++..+++++..||..|-++||+++++...|
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~l 801 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFL 801 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHH
Confidence 12334556799999999999999999999998765
No 48
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-34 Score=316.63 Aligned_cols=241 Identities=24% Similarity=0.347 Sum_probs=198.0
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.-|..++.||+|+-|.|..|++ .+|+.+|||++.+...........+++|+-+|+-+.||||+++|++++...+.+..+
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4567788999999999999955 589999999998764444445677899999999999999999999998876655444
Q ss_pred ecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 LSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 ~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
.+..+ ..+.+.+.+..+++.||..|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|..-. ++.-
T Consensus 92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-~gkl 167 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV-PGKL 167 (786)
T ss_pred EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc-CCcc
Confidence 32222 245678888999999999999999999 99999999999999999999999999998644 3445
Q ss_pred eeccccccCccCccccccCCCC-cccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
..+.+|++.|.|||+++|.+|. .++||||.|||+|.++||+.||++. +....+.++..+.+..|. ..
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd--------Nir~LLlKV~~G~f~MPs----~I 235 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD--------NIRVLLLKVQRGVFEMPS----NI 235 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc--------cHHHHHHHHHcCcccCCC----cC
Confidence 5678999999999999999985 7899999999999999999999832 223334444445444432 33
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+.+..+++.+|+..||+.|.|++||.+
T Consensus 236 s~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 236 SSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred CHHHHHHHHHHhccCccccccHHHHhh
Confidence 446899999999999999999999986
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.6e-34 Score=316.57 Aligned_cols=244 Identities=23% Similarity=0.274 Sum_probs=185.3
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.|+..+.||+|+||.||+|.. .+|+.||+|.+.............+.+|++++++++|++|+++++++.+.+..+.++.
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999954 5799999999865432223334567899999999999999999998876554322221
Q ss_pred -cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 -SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 -~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
... .....+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-E 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-C
Confidence 111 1123578899999999999999999999 9999999999999999999999999999875432 2
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......||..|+|||++.+..++.++||||+||++|||++|+.||......... ............. .....
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~----~~~~~ 228 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR----EEVDRRVKEDQEE----YSEKF 228 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH----HHHHHHhhccccc----CCccC
Confidence 234457899999999999999999999999999999999999999743321100 1111111111111 12233
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPT-----MPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1071 (1075)
+..+.+++.+||+.||++||+ ++|+++
T Consensus 229 s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 229 SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 456899999999999999997 788875
No 50
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6e-34 Score=320.47 Aligned_cols=235 Identities=21% Similarity=0.269 Sum_probs=182.9
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc-
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA- 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~- 898 (1075)
+.||+|+||.||+|.. .+|+.||+|++.............+.+|+.++++++||||+++++++......+ ++++...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~-lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLC-FVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEE-EEEeCCCC
Confidence 4699999999999955 579999999987543223334567889999999999999999999887755432 2222211
Q ss_pred --------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccc
Q 042958 899 --------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970 (1075)
Q Consensus 899 --------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 970 (1075)
....+++.+...++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 156 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccccee
Confidence 234578889999999999999999999 999999999999999999999999999986543334445567
Q ss_pred cccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHH
Q 042958 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050 (1075)
Q Consensus 971 gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1050 (1075)
||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. ....++.+
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~~~~~~~~~p~----~~~~~~~~ 224 (323)
T cd05571 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEIRFPR----TLSPEAKS 224 (323)
T ss_pred cCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCCCCCCC----CCCHHHHH
Confidence 99999999999999999999999999999999999999863221 1111222222222221 23446899
Q ss_pred HHHHccCCCCCCCC-----CHHHHHh
Q 042958 1051 VAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1051 li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
++.+||+.||++|| ++.|+++
T Consensus 225 li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 225 LLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 99999999999999 7888875
No 51
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.9e-33 Score=314.20 Aligned_cols=250 Identities=21% Similarity=0.311 Sum_probs=182.8
Q ss_pred cCCCCCceecccCceEEEEEEECC-----------------CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCcee
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELAS-----------------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIV 877 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 877 (1075)
.+|++.+.||+|+||.||+|...+ +..||+|.+.... ......+|.+|++++++++||||+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCee
Confidence 578888999999999999996532 3479999987542 233457899999999999999999
Q ss_pred eEEEEeeccccchhheecCcc----------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 042958 878 KFYGFCSHVRHSLAMILSNNA----------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPP 929 (1075)
Q Consensus 878 ~l~~~~~~~~~~l~~~~~~~~----------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 929 (1075)
++++++......+ ++++... ....++|.+..+++.||+.|++|||+. +
T Consensus 83 ~~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ 158 (304)
T cd05096 83 RLLGVCVDEDPLC-MITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---N 158 (304)
T ss_pred EEEEEEecCCceE-EEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---C
Confidence 9999987654322 2211110 112467888999999999999999999 9
Q ss_pred eEEecCCCCCeeeCCCCCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh--C
Q 042958 930 IVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--G 1005 (1075)
Q Consensus 930 ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g 1005 (1075)
|+||||||+||+++.++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ +
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 999999999999999999999999999866443221 122345788999999988889999999999999999987 5
Q ss_pred CCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1006 KHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1006 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..||.......... ....................++..+.+++.+||+.||++|||++||.+.|+
T Consensus 239 ~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 239 EQPYGELTDEQVIE----NAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCCcCCHHHHHH----HHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 56765432211100 000000000000000011123346899999999999999999999999885
No 52
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.7e-34 Score=309.55 Aligned_cols=243 Identities=24% Similarity=0.294 Sum_probs=190.6
Q ss_pred HhcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
..++|+...+||+|+||+||.|+ ..+|+.+|+|++++...-...+.+.+..|..+|....+|.||+++-.|++.+..+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY- 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY- 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE-
Confidence 45899999999999999999995 4579999999999876666677888999999999999999999998888765543
Q ss_pred heecCccc---------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC-
Q 042958 892 MILSNNAA---------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP- 961 (1075)
Q Consensus 892 ~~~~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~- 961 (1075)
.++++..+ .+.|+....+.++.+.+-|++.+|+. |+|||||||+|+|+|..|++||+|||++..+..
T Consensus 218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 33333222 35678888899999999999999999 999999999999999999999999999953321
Q ss_pred ----------------------CCCc----e--------------------eccccccCccCccccccCCCCcccchHhH
Q 042958 962 ----------------------DSSN----W--------------------TELAGTYGYVAPELAYTMKVTEKCDVYSF 995 (1075)
Q Consensus 962 ----------------------~~~~----~--------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~ 995 (1075)
+... . ...+|||.|||||++.+..|+..+|+||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 0000 0 12469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCC--CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCC---HHHHH
Q 042958 996 GVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPR--LPTPSCIVQDKLISIVEVAISCLDENPESRPT---MPKVS 1070 (1075)
Q Consensus 996 G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl 1070 (1075)
|||||||+.|.+||....+. .....++..+ +..|. ..+...+..++|.+|+. ||++|-- ++||.
T Consensus 375 G~ImyEmLvGyPPF~s~tp~--------~T~rkI~nwr~~l~fP~--~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQ--------ETYRKIVNWRETLKFPE--EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhhhccCCC--cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 99999999999999754332 2222222222 22221 12233578999999999 9999985 55554
No 53
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=282.04 Aligned_cols=251 Identities=23% Similarity=0.339 Sum_probs=190.2
Q ss_pred HHhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc--
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-- 888 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 888 (1075)
...++|++.+.+|+|+|..||.+ ...+++.||+|++.-.. .+..+...+|++..++++||||+++++++.....
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 44678999999999999999999 46789999999987543 3446788999999999999999999987744322
Q ss_pred --chhheecC-------------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecc
Q 042958 889 --SLAMILSN-------------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953 (1075)
Q Consensus 889 --~l~~~~~~-------------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 953 (1075)
..+..+.+ ...+..+++.+.++|+.+|++||++||+. .|+++||||||.||++.+++.+++.||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence 11111111 12355789999999999999999999998 347999999999999999999999999
Q ss_pred ccccccCCCCC---------ceeccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh
Q 042958 954 GIAKFLKPDSS---------NWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN 1021 (1075)
Q Consensus 954 Gla~~~~~~~~---------~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~ 1021 (1075)
|.++...-.-. .......|..|+|||.+. +...++++||||+||++|+||.|..||+..-.. -...
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~-GgSl- 251 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ-GGSL- 251 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-CCeE-
Confidence 99976542211 122345789999999886 345689999999999999999999999743221 0000
Q ss_pred hhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1022 LNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.-.+..+.+..|.. ..++..+.++++.|++.||.+||++.|++..++
T Consensus 252 ----aLAv~n~q~s~P~~--~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 252 ----ALAVQNAQISIPNS--SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred ----EEeeeccccccCCC--CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 11122223322221 125667999999999999999999999998764
No 54
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-34 Score=296.49 Aligned_cols=246 Identities=25% Similarity=0.326 Sum_probs=182.1
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc----
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS---- 889 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 889 (1075)
-.|+..+++|.|+||.||+|... +++.||||+...... .--+|+++|+.+.|||||++.-+|......
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 34666789999999999999654 579999999864332 223799999999999999999887654332
Q ss_pred hhheecCc------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC-CCceEeccccc
Q 042958 890 LAMILSNN------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIA 956 (1075)
Q Consensus 890 l~~~~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla 956 (1075)
+..++++. ..+..++.....-+++||.+||.|||+. +|+||||||.|+|+|.+ |.+||||||.|
T Consensus 97 lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 97 LNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 11112111 1244556666677899999999999998 99999999999999987 89999999999
Q ss_pred cccCCCCCceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh-------hhhhh-
Q 042958 957 KFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL-------NIALD- 1027 (1075)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~-------~~~~~- 1027 (1075)
+.+.+.... .....|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.+..+...... .+.+.
T Consensus 174 K~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 174 KVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 998876555 556789999999988765 69999999999999999999999998655432111000 00011
Q ss_pred ------hccCCCCCCCC---cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 ------EMLDPRLPTPS---CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 ------~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+...+.+.... .......++..+++.++++++|.+|.++.|++.
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11112221111 123345567999999999999999999999875
No 55
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.4e-33 Score=321.73 Aligned_cols=244 Identities=23% Similarity=0.342 Sum_probs=182.9
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+++++.++|+||+++++++......+ ++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-lv 150 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQ-VL 150 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEE-EE
Confidence 45566788999999999999654 78999999986532 3334578999999999999999999999987655433 22
Q ss_pred ecCccc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceec
Q 042958 894 LSNNAA-----AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE 968 (1075)
Q Consensus 894 ~~~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 968 (1075)
+++... .....+.....++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.+.........
T Consensus 151 ~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 227 (353)
T PLN00034 151 LEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNS 227 (353)
T ss_pred EecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccccccc
Confidence 222211 22346777788999999999999999 9999999999999999999999999999876544333445
Q ss_pred cccccCccCcccccc-----CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHH
Q 042958 969 LAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQD 1043 (1075)
Q Consensus 969 ~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1075)
..||..|+|||++.. ...+.++|||||||++|||++|+.||.......... ..........+ .....
T Consensus 228 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~---~~~~~ 299 (353)
T PLN00034 228 SVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWAS-----LMCAICMSQPP---EAPAT 299 (353)
T ss_pred cccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHH-----HHHHHhccCCC---CCCCc
Confidence 679999999998743 234568999999999999999999997322111111 11111111111 11123
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1044 KLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...++.+++.+||+.||++|||++|+++.
T Consensus 300 ~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 300 ASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 34569999999999999999999999863
No 56
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.3e-33 Score=316.26 Aligned_cols=233 Identities=23% Similarity=0.284 Sum_probs=179.7
Q ss_pred ecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc----
Q 042958 823 IGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN---- 897 (1075)
Q Consensus 823 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~---- 897 (1075)
||+|+||.||+|... +++.||+|++.............+.+|+.++++++||||+++++++......+. +++..
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l-v~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYL-VLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEE-EEcCCCCCc
Confidence 699999999999654 688999999865322233345678899999999999999999998876554322 22211
Q ss_pred -----cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccccc
Q 042958 898 -----AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT 972 (1075)
Q Consensus 898 -----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt 972 (1075)
.....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.............||
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 156 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGT 156 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCC
Confidence 1234578899999999999999999999 99999999999999999999999999998654443344456799
Q ss_pred cCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHH
Q 042958 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVA 1052 (1075)
Q Consensus 973 ~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 1052 (1075)
+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+ ......+.+++
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~~~li 224 (312)
T cd05585 157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--------NEMYRKILQEPLRFP----DGFDRDAKDLL 224 (312)
T ss_pred cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH--------HHHHHHHHcCCCCCC----CcCCHHHHHHH
Confidence 999999999999999999999999999999999999964321 111222222222222 22344689999
Q ss_pred HHccCCCCCCCCC---HHHHHh
Q 042958 1053 ISCLDENPESRPT---MPKVSQ 1071 (1075)
Q Consensus 1053 ~~cl~~dP~~RPs---~~evl~ 1071 (1075)
.+||+.||++||+ +.|+++
T Consensus 225 ~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 225 IGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHcCCCHHHcCCCCCHHHHHc
Confidence 9999999999985 555543
No 57
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-34 Score=320.65 Aligned_cols=241 Identities=28% Similarity=0.478 Sum_probs=192.5
Q ss_pred CCCCceecccCceEEEEEEE-CCC----CEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-ASG----EIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-~~g----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
....++||+|+||+||+|.+ ..| -+||+|++...... ....++.+|+..|.+++|||+++++|+|......++
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~--~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP--KASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc--hhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHH
Confidence 34568899999999999954 334 36999998765433 335789999999999999999999999988764433
Q ss_pred heecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 892 MILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 892 ~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
..+... .....+.-+..+.|.+|||+||.|||++ ++|||||.++|||+.+...+||.|||+|+...++.
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 332221 1345577788899999999999999999 99999999999999999999999999999988776
Q ss_pred Cceecccc--ccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcC
Q 042958 964 SNWTELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCI 1040 (1075)
Q Consensus 964 ~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1075)
..+....| .+.|||-|.+....|+.++|||||||++||++| |..|++..+..+.... ++. ..+++.|.
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl-----le~--geRLsqPp-- 923 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL-----LEK--GERLSQPP-- 923 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH-----Hhc--cccCCCCC--
Confidence 66554444 679999999999999999999999999999998 9999986654332211 111 12355543
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
-+..+++-++.+||..|+..||+++++...+
T Consensus 924 --iCtiDVy~~mvkCwmid~~~rp~fkel~~~f 954 (1177)
T KOG1025|consen 924 --ICTIDVYMVMVKCWMIDADSRPTFKELAEEF 954 (1177)
T ss_pred --CccHHHHHHHHHHhccCcccCccHHHHHHHH
Confidence 3444589999999999999999999998765
No 58
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.1e-33 Score=313.72 Aligned_cols=238 Identities=24% Similarity=0.296 Sum_probs=185.9
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|... +|+.||+|++...........+.+.+|++++++++||||+++++++.+.... .++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~-~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFL-YML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeE-EEE
Confidence 46888999999999999999654 7999999998653322333456788999999999999999999888765433 222
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+++.. ....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence 22211 234578888899999999999999999 9999999999999999999999999999876432
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.+.......+. ..
T Consensus 155 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~~~~~~----~~ 221 (291)
T cd05612 155 -TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--------FGIYEKILAGKLEFPR----HL 221 (291)
T ss_pred -cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCcCCCc----cC
Confidence 2235789999999999998999999999999999999999999864322 1112222222222221 22
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPT-----MPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1071 (1075)
...+.+++.+|++.||.+||+ ++|+++
T Consensus 222 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 222 DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred CHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 346899999999999999995 888765
No 59
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-34 Score=312.20 Aligned_cols=244 Identities=21% Similarity=0.322 Sum_probs=202.8
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
.++|...+++|+|+||.++.++++ ++..||+|.+......+.. ++...+|+.++++++|||||.+.+.|...+..+.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 367888999999999999999554 6789999999876655544 45788999999999999999999999887775555
Q ss_pred eecCccc-----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 893 ILSNNAA-----------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 893 ~~~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
++.+..+ +..+++++..+|+.|++.|+.|||+. .|+|||||+.||+++.++.+|++|||+|+.+.+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 5443322 35578888999999999999999988 999999999999999999999999999999998
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
+.....+.+||+.||+||.+.+.+|..|+||||+||++|||++-+.+|...+. .....++......+ ..
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~~~~P---lp 227 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRGLYSP---LP 227 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhccCCC---CC
Confidence 87677788999999999999999999999999999999999999999974332 22223333333211 22
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..++.++..+++.|+..+|..||++.|++..
T Consensus 228 ~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 228 SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 3455679999999999999999999999874
No 60
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=318.17 Aligned_cols=238 Identities=25% Similarity=0.279 Sum_probs=186.6
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.++++++||||+++++++...+..+. +
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l-v 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF-L 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE-E
Confidence 57888899999999999999664 689999999865332233345678999999999999999999999877654332 2
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 172 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT- 172 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc-
Confidence 22211 234578888889999999999999999 99999999999999999999999999998764322
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+.+.......+.. .
T Consensus 173 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i~~~~~~~p~~----~ 238 (329)
T PTZ00263 173 --FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--------FRIYEKILAGRLKFPNW----F 238 (329)
T ss_pred --ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--------HHHHHHHhcCCcCCCCC----C
Confidence 235789999999999999999999999999999999999999864322 11122233333332222 2
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPT-----MPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1071 (1075)
...+.+++.+||+.||++||+ ++|+++
T Consensus 239 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 239 DGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 335889999999999999997 677764
No 61
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.6e-33 Score=312.83 Aligned_cols=252 Identities=19% Similarity=0.271 Sum_probs=184.2
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
.++|++.+.||+|+||.||+|... +++.||||++....... ....+.+|+.+++.++||||+++++++......+.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG--TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc--cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 478999999999999999999665 78999999987543222 234677899999999999999999998776543222
Q ss_pred eecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++.. .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 -~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 82 -FEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred -EECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 2211 1124578888999999999999999999 99999999999999999999999999997654333
Q ss_pred CceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhh--------------hh
Q 042958 964 SNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIAL--------------DE 1028 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~--------------~~ 1028 (1075)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||................. ..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence 33445678999999998865 4578899999999999999999999975432111000000000 00
Q ss_pred ccCCCCC--CCCcCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1029 MLDPRLP--TPSCIV-----QDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1029 ~~~~~~~--~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.....+. .+.... ......+.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000 000000 011245789999999999999999999985
No 62
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.7e-34 Score=295.80 Aligned_cols=240 Identities=22% Similarity=0.352 Sum_probs=197.9
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
..+|++.+.+|+|.||.|-+| .+..|+.||||.+++....+++..-.+.+|+++|+.++||||+.++++|+..+....
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi- 130 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI- 130 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE-
Confidence 356777788999999999999 557899999999998877777767789999999999999999999999987655332
Q ss_pred eecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++++. .....+++.+.+.++.||..|+.|+|.+ +|+|||||.+|||+|.++++||+|||++-.+.. .
T Consensus 131 vMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~-~ 206 (668)
T KOG0611|consen 131 VMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD-K 206 (668)
T ss_pred EEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc-c
Confidence 22222 2345688899999999999999999999 999999999999999999999999999987764 3
Q ss_pred CceeccccccCccCccccccCCCC-cccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 964 SNWTELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
....+++|++-|.+||.+.+.+|. +.+|-||+||++|.+..|..|||+.+. ...+.++..+.+..|..
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--------k~lvrQIs~GaYrEP~~--- 275 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--------KRLVRQISRGAYREPET--- 275 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--------HHHHHHhhcccccCCCC---
Confidence 456778999999999999999984 889999999999999999999985332 22334444444433321
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+....-+|++|+..+|++|.|+.||..
T Consensus 276 --PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 276 --PSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred --CchHHHHHHHHHhcCcccchhHHHHhh
Confidence 123567999999999999999999874
No 63
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.1e-33 Score=321.06 Aligned_cols=246 Identities=19% Similarity=0.292 Sum_probs=181.7
Q ss_pred hcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
..+|++.+.||+|+||.||+|. ..+++.||+|+.. .+.+.+|++++++++||||+++++++......+.+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 3679999999999999999994 4578999999743 24567899999999999999999988765543222
Q ss_pred eecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC-C
Q 042958 893 ILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS-S 964 (1075)
Q Consensus 893 ~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~-~ 964 (1075)
+.... .....+++.+++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+...... .
T Consensus 162 ~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 162 LPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 21111 1234578899999999999999999999 99999999999999999999999999997543222 2
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccc---hh------------------hhh
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSS---SL------------------NLN 1023 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~---~~------------------~~~ 1023 (1075)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .. ...
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 233467999999999999989999999999999999999999886422111000 00 000
Q ss_pred hhhh----hccC--CCCCCCC---cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1024 IALD----EMLD--PRLPTPS---CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1024 ~~~~----~~~~--~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.... .... ...+... ......+.++.+++.+|++.||++|||++|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 0000 0000000 011123557899999999999999999999985
No 64
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.5e-33 Score=314.61 Aligned_cols=235 Identities=22% Similarity=0.263 Sum_probs=183.0
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc-
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA- 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~- 898 (1075)
+.||+|+||.||++.. .+|+.||+|++.............+.+|+++++.++||||+++++++...+..+. ++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l-v~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCF-VMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEE-EEeCCCC
Confidence 4699999999999955 4799999999875433333445678899999999999999999998876554322 222211
Q ss_pred --------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccc
Q 042958 899 --------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970 (1075)
Q Consensus 899 --------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 970 (1075)
....+++.+...++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 156 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFC 156 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccccc
Confidence 134578899999999999999999999 999999999999999999999999999986543333344567
Q ss_pred cccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHH
Q 042958 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050 (1075)
Q Consensus 971 gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1050 (1075)
||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+ ...+.++.+
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--------~~~~~~~~~~~~~p----~~~~~~~~~ 224 (328)
T cd05593 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEDIKFP----RTLSADAKS 224 (328)
T ss_pred CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--------HHHHHhccCCccCC----CCCCHHHHH
Confidence 999999999999989999999999999999999999999643211 11112221222222 123446899
Q ss_pred HHHHccCCCCCCCC-----CHHHHHh
Q 042958 1051 VAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1051 li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
++.+|+++||++|| ++.|+++
T Consensus 225 li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 225 LLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 99999999999997 8998875
No 65
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=294.39 Aligned_cols=255 Identities=21% Similarity=0.287 Sum_probs=188.9
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCc-eeeEEEEeecccc---
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRN-IVKFYGFCSHVRH--- 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~--- 888 (1075)
...|+..++||+|+||+||+| ...+|+.||+|+++..... +-......+|+.++++++|+| ||++++++...+.
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 345666778999999999999 4568999999999865432 123456789999999999999 9999999977653
Q ss_pred --chhheecCc---------ccc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccc
Q 042958 889 --SLAMILSNN---------AAA---KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFG 954 (1075)
Q Consensus 889 --~l~~~~~~~---------~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 954 (1075)
.+.++++.. ... ..++-.....++.|+++|++|+|++ +|+||||||.||+++++|.+||+|||
T Consensus 89 ~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 89 IGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred cceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 332222211 001 3456678899999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccch--------hhhhhh
Q 042958 955 IAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSS--------LNLNIA 1025 (1075)
Q Consensus 955 la~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~--------~~~~~~ 1025 (1075)
+|+...-+...++..++|..|+|||++.+. .|+...||||+||+++||++++.-|.+....+... .....+
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 999777666667788999999999998876 68999999999999999999998887554321000 000000
Q ss_pred -----hhhc--cCCCCCCCCcCcH---HHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1026 -----LDEM--LDPRLPTPSCIVQ---DKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1026 -----~~~~--~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.... ..+..+.+..... .......+++.+|++.+|.+|.|++.+++.
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 0000 0011110111111 111368899999999999999999998863
No 66
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3e-33 Score=314.68 Aligned_cols=235 Identities=21% Similarity=0.269 Sum_probs=182.3
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc-
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA- 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~- 898 (1075)
+.||+|+||.||++.. .+|+.||+|++.............+.+|+++++.++||||+++++++...+..+ +++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~-lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC-FVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEE-EEEeCCCC
Confidence 4699999999999955 579999999987543223334567788999999999999999999887655432 2222211
Q ss_pred --------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccc
Q 042958 899 --------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970 (1075)
Q Consensus 899 --------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 970 (1075)
....+++...+.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 156 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 156 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccccc
Confidence 234578999999999999999999999 999999999999999999999999999886444333444567
Q ss_pred cccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHH
Q 042958 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050 (1075)
Q Consensus 971 gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1050 (1075)
||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+. ..+..+.+
T Consensus 157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--------~~~~~~~~~~~~~~p~----~~~~~~~~ 224 (323)
T cd05595 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEIRFPR----TLSPEAKS 224 (323)
T ss_pred CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCCCCCC----CCCHHHHH
Confidence 99999999999999999999999999999999999999863321 1111222222222221 23346899
Q ss_pred HHHHccCCCCCCCC-----CHHHHHh
Q 042958 1051 VAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1051 li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
++.+||++||++|| ++.|+++
T Consensus 225 li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 225 LLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 99999999999998 8888765
No 67
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=296.39 Aligned_cols=253 Identities=24% Similarity=0.367 Sum_probs=183.8
Q ss_pred HhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC--CcCceeeEEEEeeccccch
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI--RHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~l 890 (1075)
...+.+..+.||+|.||+||+|+|+ |+.||||++.... ++.+.+|.++++.. +|+||+.|++.-..++..+
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hhheeEEEEEecCccccceeecccc-CCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 3467788899999999999999999 9999999996531 25566777777765 9999999998776555442
Q ss_pred hhe---ecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEecCCCCCeeeCCCCCceEeccc
Q 042958 891 AMI---LSNNA--------AAKDLGWTRRMNVIKGISDALSYMHND-----CFPPIVHRDISSKNVLLDFDNEAHVSDFG 954 (1075)
Q Consensus 891 ~~~---~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 954 (1075)
..+ -.+.+ ....++....++++..+|.||+|||.+ ..|.|.|||||+.||++..++.+.|+|+|
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred EEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence 221 11221 234567788899999999999999965 34899999999999999999999999999
Q ss_pred cccccCCCCC----ceeccccccCccCccccccCC----C--CcccchHhHHHHHHHHHh----C------CCCCCccCc
Q 042958 955 IAKFLKPDSS----NWTELAGTYGYVAPELAYTMK----V--TEKCDVYSFGVLALEVIK----G------KHPRDFISS 1014 (1075)
Q Consensus 955 la~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~----~--~~~~Dv~s~G~vl~ellt----g------~~p~~~~~~ 1014 (1075)
+|........ .....+||-+|||||++...- + -..+||||||.|+||+.. | +.||.+.-+
T Consensus 362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP 441 (513)
T ss_pred eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence 9988765532 234578999999999986532 2 235899999999999985 2 356654322
Q ss_pred cc-cchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1015 MS-SSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1015 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
.+ ..+........+-..|..+..+ ...+....+.++|+.||..+|..|-|+--+.+.|
T Consensus 442 ~DPs~eeMrkVVCv~~~RP~ipnrW-~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl 500 (513)
T KOG2052|consen 442 SDPSFEEMRKVVCVQKLRPNIPNRW-KSDPALRVMAKLMKECWYANPAARLTALRIKKTL 500 (513)
T ss_pred CCCCHHHHhcceeecccCCCCCccc-ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHH
Confidence 21 1111111111111122222222 2345677899999999999999999998887765
No 68
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.4e-34 Score=280.03 Aligned_cols=247 Identities=21% Similarity=0.312 Sum_probs=197.7
Q ss_pred HhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCC-----CchhHHHHHHHHHHHHhcC-CcCceeeEEEEeec
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLP-----GEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH 885 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 885 (1075)
.-..|...+.+|+|..++|.++ ...+|..+|+|++..... ......++-.+|+.+++++ .||+|+++.++++.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3456777889999999999988 455789999998854321 1223455677899999999 89999999999987
Q ss_pred cccchhheec--------CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccc
Q 042958 886 VRHSLAMILS--------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957 (1075)
Q Consensus 886 ~~~~l~~~~~--------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 957 (1075)
+...+.++-. +......+++.+.++|+.|+.+|++|||.. .|||||+||+|||+|++.++||+|||+|+
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFAC 171 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceee
Confidence 6655444311 112344578889999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCceeccccccCccCcccccc------CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccC
Q 042958 958 FLKPDSSNWTELAGTYGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD 1031 (1075)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1075)
.+.+. ...+..+|||+|.|||.+.. ..|+..+|+|+.||+||.++.|.+||..- ..-..+..+..
T Consensus 172 ~l~~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--------kQmlMLR~Ime 242 (411)
T KOG0599|consen 172 QLEPG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--------KQMLMLRMIME 242 (411)
T ss_pred ccCCc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--------HHHHHHHHHHh
Confidence 88754 55677899999999998863 35788999999999999999999998511 11122344455
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1032 PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1032 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+++......+.+.+....+++.+|++.||.+|.|++|++.
T Consensus 243 GkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 243 GKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred cccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 5555555567788889999999999999999999999875
No 69
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.1e-33 Score=310.44 Aligned_cols=252 Identities=21% Similarity=0.350 Sum_probs=180.6
Q ss_pred cCCCCCceecccCceEEEEEEE-C-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC---CcCceeeEEEEeecc---
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-A-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI---RHRNIVKFYGFCSHV--- 886 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~--- 886 (1075)
.+|++.+.||+|+||.||+|.. . +|+.||+|++......+ .....+.+|+.+++.+ +||||++++++|...
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 3688999999999999999965 3 46889999987543222 2234556677776665 699999999988532
Q ss_pred -ccchhheecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccc
Q 042958 887 -RHSLAMILSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGI 955 (1075)
Q Consensus 887 -~~~l~~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 955 (1075)
...+.++++... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 80 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 122222222211 123478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhh-------hh--
Q 042958 956 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNI-------AL-- 1026 (1075)
Q Consensus 956 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~-------~~-- 1026 (1075)
++..... .......|++.|+|||++.+..++.++||||+||++|||++|+.||............... ..
T Consensus 157 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 157 ARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred eEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchh
Confidence 9876533 2334457899999999998888999999999999999999999999754322110000000 00
Q ss_pred -----hhccCCCCCCC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1027 -----DEMLDPRLPTP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1027 -----~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..........+ .....+.+..+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000000000 0001123456789999999999999999999986
No 70
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2e-33 Score=319.45 Aligned_cols=251 Identities=27% Similarity=0.368 Sum_probs=182.2
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc----ch
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH----SL 890 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~l 890 (1075)
+|++.+.||+|+||.||+|.. .+|+.||||++...... ......+.+|++++++++||||+++++++..... .+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 478889999999999999954 57999999998643222 2224578899999999999999999998754321 12
Q ss_pred hheecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 891 AMILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 891 ~~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+++++... ....+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 22222211 234578999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC---ceeccccccCccCcccccc--CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchh-----------------
Q 042958 963 SS---NWTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSL----------------- 1020 (1075)
Q Consensus 963 ~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~----------------- 1020 (1075)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 21 1234578999999999865 5789999999999999999999999964332110000
Q ss_pred --hhhhhhhhccCCCCCCC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1021 --NLNIALDEMLDPRLPTP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1021 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
........+.. ..+.+ ..........+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 237 NEKARRYLSSMRK-KQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred hhhHHHHHHhhcc-cCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000011111 11100 0001122346889999999999999999999985
No 71
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.5e-33 Score=303.91 Aligned_cols=249 Identities=21% Similarity=0.297 Sum_probs=191.8
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|.. .+++.||||.+.............+.+|+++++.++||||+++++++......+..+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5788999999999999999965 478999999886543344455677899999999999999999999887654432221
Q ss_pred e-cCc-----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 894 L-SNN-----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 894 ~-~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
. ... .....+++.....++.|++.|++|||+. +++|+||||+||+++.++.++++|||.+..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 1 111 1123467888899999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
.........+++.|+|||++.+..++.++||||+|+++|||++|+.||...... .......+.....+. ...
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~~--~~~ 230 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LFSLCQKIEQCDYPP--LPT 230 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc------HHHHHHHHhcCCCCC--CCh
Confidence 433334456889999999998888999999999999999999999998532211 011111111111111 112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+||+.+|++||++.||++.++
T Consensus 231 ~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~ 263 (267)
T cd08228 231 EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAK 263 (267)
T ss_pred hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHH
Confidence 234567999999999999999999999999875
No 72
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.4e-33 Score=319.87 Aligned_cols=248 Identities=24% Similarity=0.379 Sum_probs=185.2
Q ss_pred HHHhcCCCCCceecccCceEEEEEEE------CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEe
Q 042958 811 IRATNDFDDEHCIGKGGQGSVYKAEL------ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFC 883 (1075)
Q Consensus 811 ~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 883 (1075)
....++|++.+.||+|+||.||+|.. .++..||||++..... ....+.+.+|+++++.+ +|||||+++++|
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 34456899999999999999999853 2345799999975432 23356788999999999 899999999988
Q ss_pred eccccchhheecCc------------------------------------------------------------------
Q 042958 884 SHVRHSLAMILSNN------------------------------------------------------------------ 897 (1075)
Q Consensus 884 ~~~~~~l~~~~~~~------------------------------------------------------------------ 897 (1075)
......+.+ ++..
T Consensus 112 ~~~~~~~lv-~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 112 THGGPVLVI-TEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred cCCCCeEEe-HhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 765432111 1100
Q ss_pred -------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 898 -------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 898 -------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.....+++.+.++++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 0112478888999999999999999999 999999999999999999999999999986543322
Q ss_pred c--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 965 N--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 965 ~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
. .....++..|+|||++.+..++.++||||||+++|||++ |+.||........ ........... ..+.
T Consensus 268 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~----~~~~~~~~~~~--~~~~--- 338 (374)
T cd05106 268 YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK----FYKMVKRGYQM--SRPD--- 338 (374)
T ss_pred eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH----HHHHHHcccCc--cCCC---
Confidence 1 112335678999999998899999999999999999997 9999864322110 00111111111 1111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+.++.+++.+||+.||++|||+.||++.|+
T Consensus 339 -~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~ 370 (374)
T cd05106 339 -FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQ 370 (374)
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 12346999999999999999999999999875
No 73
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.3e-33 Score=310.25 Aligned_cols=245 Identities=24% Similarity=0.441 Sum_probs=186.5
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCC----EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
..+|+..+.||+|+||.||+|.+. +|+ .||+|++... ......+++..|+.+++.++||||++++|+|.....
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCc
Confidence 356899999999999999999653 344 3899998643 223345789999999999999999999999977544
Q ss_pred chhheecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 SLAMILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 ~l~~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
.+.+.+...+ ....+++...++++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccccc
Confidence 3333222211 133578888999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCcee--ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 961 PDSSNWT--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 961 ~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
....... ...++..|+|||++.+..++.++||||||+++||+++ |+.||+...... ....... ....+.+
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-----~~~~~~~--~~~~~~~ 233 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEK--GERLPQP 233 (316)
T ss_pred CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhC--CCCCCCC
Confidence 4433222 2234678999999999999999999999999999998 999987432211 0111111 1122222
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
. .+...+.+++.+||+.||.+||++.|++..+.
T Consensus 234 ~----~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 234 P----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred C----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2 22346899999999999999999999998763
No 74
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=284.89 Aligned_cols=245 Identities=22% Similarity=0.294 Sum_probs=193.9
Q ss_pred HhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
.++.|++.+.||+|.|+.||+. ...+|+.+|+|.+........ ..+++.+|+++-+.++|||||++.+.+......+.
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl 87 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 87 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence 3567788889999999999999 556899999998865433322 35789999999999999999999987765443332
Q ss_pred heecCcccc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC---CCceEecccccccc
Q 042958 892 MILSNNAAA---------KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD---NEAHVSDFGIAKFL 959 (1075)
Q Consensus 892 ~~~~~~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfGla~~~ 959 (1075)
++ +...++ ..+++...-..+.||++|+.|.|.+ +|||||+||+|+++-.. .-+|++|||+|..+
T Consensus 88 vF-e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 88 VF-DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EE-ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 22 222211 1234445566889999999999999 99999999999999643 36999999999998
Q ss_pred CCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCc
Q 042958 960 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSC 1039 (1075)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1075)
. +...+...+|||+|||||+.+..+|+..+|||+-||++|-++.|..||.+.+ .....+.+.......+..
T Consensus 164 ~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--------~~rlye~I~~g~yd~~~~ 234 (355)
T KOG0033|consen 164 N-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYEQIKAGAYDYPSP 234 (355)
T ss_pred C-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--------HHHHHHHHhccccCCCCc
Confidence 8 5556677899999999999999999999999999999999999999997422 223345555555554444
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1040 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
++....++..+++++|+..||.+|.|+.|.++
T Consensus 235 ~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 235 EWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 56667778999999999999999999999875
No 75
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.3e-33 Score=308.49 Aligned_cols=251 Identities=18% Similarity=0.234 Sum_probs=183.8
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|.. .+++.||+|+++..... .....+.+|++++++++||||+++++++...+.. .++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv 81 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCL-TLV 81 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeE-EEE
Confidence 5788999999999999999955 47899999998654322 1235678999999999999999999998765432 222
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.....++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 82 FEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred EeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 2211 1133468888999999999999999999 999999999999999999999999999986544333
Q ss_pred ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh----------------hhhhhh
Q 042958 965 NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN----------------LNIALD 1027 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~----------------~~~~~~ 1027 (1075)
......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+..... ......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR 238 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence 3445578999999998865 56889999999999999999999998643221100000 000000
Q ss_pred hccCCCCCCC--CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 EMLDPRLPTP--SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 ~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+..... .........+..+++.+|++.||.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0111110000 0001112346889999999999999999999985
No 76
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.5e-33 Score=316.61 Aligned_cols=246 Identities=25% Similarity=0.409 Sum_probs=185.5
Q ss_pred hcCCCCCceecccCceEEEEEEE------CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeecc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL------ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHV 886 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 886 (1075)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+..|+.++.++ +|+||++++++|...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 45789999999999999999943 235789999987532 222346788999999999 899999999988655
Q ss_pred ccchhheecCcc--------------------------------------------------------------------
Q 042958 887 RHSLAMILSNNA-------------------------------------------------------------------- 898 (1075)
Q Consensus 887 ~~~l~~~~~~~~-------------------------------------------------------------------- 898 (1075)
+..+..++++..
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 433222221110
Q ss_pred --ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc--eeccccccC
Q 042958 899 --AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYG 974 (1075)
Q Consensus 899 --~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~ 974 (1075)
....++|..+.+++.||++|++|||+. +|+||||||+||+++.++.+||+|||+++.+...... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 013678999999999999999999999 9999999999999999999999999999876433221 223455678
Q ss_pred ccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHH
Q 042958 975 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAI 1053 (1075)
Q Consensus 975 y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 1053 (1075)
|+|||++.+..++.++||||+||++|||++ |+.||......+. ............ .+ ......+.+++.
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~--~~----~~~~~~~~~l~~ 310 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE----FCRRLKEGTRMR--AP----EYATPEIYSIML 310 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH----HHHHHhccCCCC--CC----ccCCHHHHHHHH
Confidence 999999999999999999999999999998 9999864322110 001111111111 11 123346899999
Q ss_pred HccCCCCCCCCCHHHHHhhhc
Q 042958 1054 SCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1054 ~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+||+.+|++||++.||++.|+
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~ 331 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILG 331 (337)
T ss_pred HHccCChhhCcCHHHHHHHHH
Confidence 999999999999999999875
No 77
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.3e-33 Score=318.68 Aligned_cols=246 Identities=24% Similarity=0.408 Sum_probs=184.5
Q ss_pred HhcCCCCCceecccCceEEEEEEE------CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeec
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL------ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH 885 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 885 (1075)
..++|++.+.||+|+||.||+|+. .++..||||+++.... ....+.+.+|+++++.+ +||||++++++|..
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 345788999999999999999953 2466899999865322 22356788999999999 89999999999876
Q ss_pred cccchhheecCc--------------------------------------------------------------------
Q 042958 886 VRHSLAMILSNN-------------------------------------------------------------------- 897 (1075)
Q Consensus 886 ~~~~l~~~~~~~-------------------------------------------------------------------- 897 (1075)
....+.++ +..
T Consensus 111 ~~~~~lv~-E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 111 GGPTLVIT-EYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred CCcceeee-hhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 54432111 100
Q ss_pred ----------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 898 ----------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 898 ----------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
.....++|..+.+++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 0112478899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 962 DSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 962 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
.... .....++..|+|||++.+..++.++||||||+++|||++ |..||........ ......... +...+.
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~----~~~~~~~~~--~~~~~~ 340 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK----FYKMIKEGY--RMLSPE 340 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH----HHHHHHhCc--cCCCCC
Confidence 3221 112334678999999999999999999999999999998 8889864322110 001111110 111111
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+.++.+++.+||+.||++||||+||++.|+
T Consensus 341 ----~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~ 372 (375)
T cd05104 341 ----CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIE 372 (375)
T ss_pred ----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 12346899999999999999999999999886
No 78
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.1e-33 Score=308.98 Aligned_cols=252 Identities=23% Similarity=0.316 Sum_probs=187.1
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|+.+ +++.||+|++...... ....+.+.+|+.+++.++||||+++++++...+..+ ++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLY-LV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEE-EE
Confidence 46889999999999999999665 6889999998754322 233567889999999999999999999887655432 22
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 22111 124578889999999999999999999 999999999999999999999999999987653322
Q ss_pred -ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh-------hhhhhh-ccCC---
Q 042958 965 -NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL-------NIALDE-MLDP--- 1032 (1075)
Q Consensus 965 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~-------~~~~~~-~~~~--- 1032 (1075)
......|++.|+|||++.+..++.++||||+||++|||++|+.||............. ...... ..++
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 2334578999999999998889999999999999999999999997433211000000 000000 0000
Q ss_pred --CCCCC---C----cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1033 --RLPTP---S----CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1033 --~~~~~---~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+.. . ......+..+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 0 001123456999999999999999999999986
No 79
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=7.9e-33 Score=311.71 Aligned_cols=239 Identities=23% Similarity=0.308 Sum_probs=181.1
Q ss_pred CCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHH---hcCCcCceeeEEEEeeccccchhh
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKAL---TEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
|++.+.||+|+||.||+|.. .+|+.||||+++..........+.+..|++++ +.++||||+++++++......+ +
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~-l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC-F 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE-E
Confidence 56778999999999999965 47899999998753222222345666676654 5678999999999987665433 2
Q ss_pred eecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 893 ILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 893 ~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+++... ....+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 80 v~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 80 VMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 222211 134689999999999999999999999 999999999999999999999999999876544333
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+. ..
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~~~~p~----~~ 224 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--------EVFDSIVNDEVRYPR----FL 224 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC----CC
Confidence 444567999999999999999999999999999999999999999643221 111222222222221 22
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
+..+.+++.+|++.||.+|| ++.|+++
T Consensus 225 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 225 SREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 34588999999999999999 5666654
No 80
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.2e-32 Score=304.57 Aligned_cols=244 Identities=24% Similarity=0.405 Sum_probs=186.5
Q ss_pred cCCCCCceecccCceEEEEEEECC-C-----CEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELAS-G-----EIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~-g-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
++|++.+.||+|+||.||+|.... + ..||+|.+.... ......+|.+|++++++++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 468888999999999999996542 2 579999986442 33445779999999999999999999998876543
Q ss_pred chhhe-ecCc-----------------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC
Q 042958 889 SLAMI-LSNN-----------------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF 944 (1075)
Q Consensus 889 ~l~~~-~~~~-----------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 944 (1075)
.+.++ +... .....+++.+.+.++.|++.|++|||+. +++||||||+||+++.
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 22111 1100 0014578888999999999999999999 9999999999999999
Q ss_pred CCCceEeccccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhh
Q 042958 945 DNEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLN 1021 (1075)
Q Consensus 945 ~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~ 1021 (1075)
++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~------ 233 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ------ 233 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH------
Confidence 99999999999986543321 1233456788999999988889999999999999999998 99998643221
Q ss_pred hhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1022 LNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.....+.....+. .....+.++.+++.+||+.||.+||+++||++.|+
T Consensus 234 --~~~~~i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 234 --EVIEMIRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred --HHHHHHHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 1111221111111 12344567999999999999999999999999885
No 81
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6e-33 Score=312.86 Aligned_cols=238 Identities=22% Similarity=0.316 Sum_probs=179.3
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|.. .+++.||+|++...........+.+..|+.++.++ +||||+++++++......+. +++...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l-v~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF-VIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEE-EEeCCC
Confidence 4699999999999965 46889999998765333344456788899988877 89999999998876554322 222211
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (329)
T cd05618 80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF 156 (329)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccc
Confidence 234578889999999999999999999 99999999999999999999999999998644333334456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh-hhhhhhhccCCCCCCCCcCcHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN-LNIALDEMLDPRLPTPSCIVQDKLISI 1048 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 1048 (1075)
.||+.|+|||++.+..++.++||||||+++|||++|+.||+........... .......+.......+ ...+..+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~~ 232 (329)
T cd05618 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKA 232 (329)
T ss_pred cCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHHH
Confidence 7999999999999999999999999999999999999999643222111111 1111122222222222 2234468
Q ss_pred HHHHHHccCCCCCCCCCH
Q 042958 1049 VEVAISCLDENPESRPTM 1066 (1075)
Q Consensus 1049 ~~li~~cl~~dP~~RPs~ 1066 (1075)
.+++.+|++.||++||++
T Consensus 233 ~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 233 ASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHhcCCHHHcCCC
Confidence 899999999999999984
No 82
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.8e-33 Score=313.63 Aligned_cols=235 Identities=21% Similarity=0.265 Sum_probs=182.1
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc-
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA- 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~- 898 (1075)
+.||+|+||.||+|.. .+|+.||+|++.............+..|+++++.++||||+++++++......+. +++...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~l-v~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF-VMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEE-EEeCCCC
Confidence 4699999999999954 5799999999875433333345677889999999999999999998876554322 222211
Q ss_pred --------ccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 --------AAKDLGWTRRMNVIKGISDALSYMHN-DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 --------~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++.+...++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 156 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccc
Confidence 23457899999999999999999997 6 99999999999999999999999999998654433344456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. ....++.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--------~~~~~~i~~~~~~~p~----~~~~~~~ 224 (325)
T cd05594 157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEIRFPR----TLSPEAK 224 (325)
T ss_pred cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH--------HHHHHHHhcCCCCCCC----CCCHHHH
Confidence 799999999999999999999999999999999999999963221 1111122222222221 2334689
Q ss_pred HHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1050 EVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
+++.+|++.||++|+ +++|+++
T Consensus 225 ~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 225 SLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 999999999999996 8998875
No 83
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5.1e-33 Score=314.69 Aligned_cols=247 Identities=19% Similarity=0.236 Sum_probs=188.0
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|... +++.||||++...........+.+..|+++++.++||||+++++++......+. +
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~l-v 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYL-A 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEE-E
Confidence 36888999999999999999665 689999999875432333345678899999999999999999999877554322 2
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 2211 1234578889999999999999999999 999999999999999999999999999986543
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.... ..........+.... .....
T Consensus 154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~-i~~~~~~~~~~~~~~---~~~~~ 229 (333)
T cd05600 154 YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWEN-LKYWKETLQRPVYDD---PRFNL 229 (333)
T ss_pred ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHH-HHhccccccCCCCCc---ccccc
Confidence 23345789999999999999999999999999999999999999974332111000 000000001111110 01123
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
+.++.+++.+|+..+|++||+++|+++.
T Consensus 230 s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 230 SDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 4568999999999999999999999863
No 84
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.8e-33 Score=313.58 Aligned_cols=239 Identities=23% Similarity=0.273 Sum_probs=185.6
Q ss_pred hcCCCCCceecccCceEEEEEEEC-C-CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-S-GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
.++|++.+.||+|+||.||+|..+ + +..||+|++...........+.+.+|+++++.++||||+++++++.+....+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~- 107 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY- 107 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE-
Confidence 457888999999999999999654 3 3689999986533223334567889999999999999999999997765432
Q ss_pred heecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 892 MILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 892 ~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 2222211 234578888899999999999999999 9999999999999999999999999999876432
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+..
T Consensus 185 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~p~~--- 250 (340)
T PTZ00426 185 ---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--------LIYQKILEGIIYFPKF--- 250 (340)
T ss_pred ---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--------HHHHHHhcCCCCCCCC---
Confidence 23457999999999999988999999999999999999999999743221 1112222222222221
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1043 DKLISIVEVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
.+..+.+++.+|++.||++|+ +++|+++
T Consensus 251 -~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 251 -LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred -CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 233588999999999999995 8998875
No 85
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.5e-32 Score=300.49 Aligned_cols=243 Identities=21% Similarity=0.336 Sum_probs=185.9
Q ss_pred hcCCCCCceecccCceEEEEEEEC----CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
.++|++.+.||+|+||.||+|.++ .+..||+|+++... .....+.+.+|+..+++++||||+++++++......
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 356888899999999999999653 46789999987643 223356799999999999999999999998765443
Q ss_pred hhheecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 890 LAMILSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 890 l~~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
.++++... ....+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+...
T Consensus 82 -~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 82 -MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred -EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 22222211 124678999999999999999999999 9999999999999999999999999987654
Q ss_pred CCCCCc-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCCC
Q 042958 960 KPDSSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLPT 1036 (1075)
Q Consensus 960 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1036 (1075)
...... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||....... ..+.+.+. ..+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 229 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--------VIKAVEDGFRLPA 229 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------HHHHHHCCCCCCC
Confidence 322111 112334678999999999999999999999999999885 999986432211 11111111 1122
Q ss_pred CCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1037 PSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1037 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+ ...+..+.+++.+||+++|++||+++|+.+.|+
T Consensus 230 ~----~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 230 P----RNCPNLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred C----CCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 2 234456999999999999999999999999874
No 86
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.2e-33 Score=312.39 Aligned_cols=243 Identities=21% Similarity=0.311 Sum_probs=183.6
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|.. .+++.||||+++..........+.+..|..+++.+ +||||+++++++......+ ++++...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~-lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLF-FVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEE-EEEeCCC
Confidence 4699999999999965 46899999999764333334456788999999998 7999999999987655432 2222111
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (329)
T cd05588 80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTF 156 (329)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccc
Confidence 234688999999999999999999999 99999999999999999999999999997543333334456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh-hhhhhhhccCCCCCCCCcCcHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN-LNIALDEMLDPRLPTPSCIVQDKLISI 1048 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 1048 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||+........... .....+.+.......+. ..+..+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~ 232 (329)
T cd05588 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 232 (329)
T ss_pred cCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCC----CCCHHH
Confidence 7999999999999999999999999999999999999999743322111110 11112222222222222 223458
Q ss_pred HHHHHHccCCCCCCCCC------HHHHHh
Q 042958 1049 VEVAISCLDENPESRPT------MPKVSQ 1071 (1075)
Q Consensus 1049 ~~li~~cl~~dP~~RPs------~~evl~ 1071 (1075)
.+++.+|++.||.+||+ ++|+++
T Consensus 233 ~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 233 SSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 99999999999999997 567654
No 87
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.1e-32 Score=302.02 Aligned_cols=249 Identities=22% Similarity=0.320 Sum_probs=191.8
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|.. .+++.||||.+......+....+++.+|+.+++.++||||+++++++...+..+..+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999964 579999999886543334445578899999999999999999999887654332221
Q ss_pred -ecCc-----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 894 -LSNN-----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 894 -~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+... .....+++...+.++.|++.|++|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 1111 1234578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
.........++..|+|||++.+..++.++||||||+++|||++|+.||...... .............+. ...
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~--~~~ 230 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCDYPP--LPS 230 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch------HHHHhhhhhcCCCCC--CCc
Confidence 443334456889999999999888999999999999999999999998632211 001111111111111 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+||+.||++||||.+|++.++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 231 DHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 234557999999999999999999999988764
No 88
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.3e-33 Score=304.85 Aligned_cols=238 Identities=24% Similarity=0.287 Sum_probs=180.9
Q ss_pred ecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe-ecCc---
Q 042958 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-LSNN--- 897 (1075)
Q Consensus 823 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~-~~~~--- 897 (1075)
||+|+||+||++.. .+|+.||+|++...........+.+..|+++++.++||||+++.+++......+.++ +...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999955 478999999986543222233456788999999999999999998887654432221 1111
Q ss_pred --------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 898 --------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 898 --------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
.....+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||.+..+..........
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 1234578999999999999999999999 99999999999999999999999999998765544444456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||||+++|||++|+.||........ .............. .....+..+.
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~ 229 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQRILNDSVT----YPDKFSPASK 229 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh----HHHHHHhhcccCCC----CcccCCHHHH
Confidence 789999999999999999999999999999999999999974322110 11111122222111 1223445689
Q ss_pred HHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1050 EVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
+++.+|++.||++|| +++|+++
T Consensus 230 ~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 230 SFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 999999999999999 6777764
No 89
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.4e-32 Score=308.68 Aligned_cols=250 Identities=23% Similarity=0.316 Sum_probs=186.9
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
.++|++.+.||+|+||.||+|... +|..||+|.+.... .....+.+.+|++++++++||||+++++++...+..+ +
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-l 80 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-I 80 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE-E
Confidence 468999999999999999999654 78899999987542 2334578999999999999999999999987655432 2
Q ss_pred eecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+++... ....+++.....++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 157 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (331)
T ss_pred EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc-
Confidence 222211 1245788888999999999999999852 6999999999999999999999999999865432
Q ss_pred CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh---------------------
Q 042958 964 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL--------------------- 1022 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~--------------------- 1022 (1075)
......|++.|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 2234578999999999999999999999999999999999999996322110000000
Q ss_pred -----------------hhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1023 -----------------NIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1023 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
......+.....+. ........++.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPK--LPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcC--CCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000000000 0011234579999999999999999999999863
No 90
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-32 Score=309.64 Aligned_cols=235 Identities=23% Similarity=0.318 Sum_probs=180.8
Q ss_pred ceecccCceEEEEEEE----CCCCEEEEEEccCCCC-CchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 821 HCIGKGGQGSVYKAEL----ASGEIVAVKKFHSPLP-GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
+.||+|+||.||+++. .+++.||||++..... ........+..|+++++.++||||+++++++...+..+ ++++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~-lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLY-LILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEE-EEEe
Confidence 6799999999999964 3588999999864321 11222456788999999999999999999987765432 2222
Q ss_pred Ccc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 896 NNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 896 ~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
... ....+.+.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcc
Confidence 221 234467788888999999999999999 99999999999999999999999999997654433334
Q ss_pred eccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 967 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
....|++.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+.......+. ..+.
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~--------~~~~~~~~~~~~~~~~----~~~~ 225 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR--------KKTIDKILKGKLNLPP----YLTP 225 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCC----CCCH
Confidence 456799999999999988899999999999999999999999974322 1122233333332222 2234
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1047 SIVEVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
.+.+++.+|+++||++|| +++++++
T Consensus 226 ~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 226 EARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 589999999999999999 7888765
No 91
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-32 Score=314.10 Aligned_cols=254 Identities=22% Similarity=0.303 Sum_probs=186.6
Q ss_pred HhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc---
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH--- 888 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 888 (1075)
..++|++.+.||+|+||.||+|.. .+|+.||||++..... .......+.+|+.+++.++||||+++++++.....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 357899999999999999999955 5689999999875432 22335678899999999999999999998865432
Q ss_pred --chhheecCccc------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 --SLAMILSNNAA------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 --~l~~~~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
.++++++.... ...+++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 12222222211 23467888889999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchh--------------hhhhhh
Q 042958 961 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSL--------------NLNIAL 1026 (1075)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~--------------~~~~~~ 1026 (1075)
.. .......||+.|+|||++.+..++.++||||+|+++|||++|+.||........... ......
T Consensus 175 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 175 TN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred cC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 32 223345789999999999999999999999999999999999999974332110000 000000
Q ss_pred hhccC--CCCC--------------CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1027 DEMLD--PRLP--------------TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1027 ~~~~~--~~~~--------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..... +..+ ............+.+++.+|++.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000 0000 000011112346899999999999999999999986
No 92
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-32 Score=304.53 Aligned_cols=243 Identities=20% Similarity=0.315 Sum_probs=184.6
Q ss_pred CCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
+|++.+.||+|+||.||+|... +++.||+|++.... .....+.+..|+.+++.++||||+++++++......
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 4666788999999999999653 25789999987542 223456789999999999999999999988765442
Q ss_pred hhheecC------------------------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC
Q 042958 890 LAMILSN------------------------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD 945 (1075)
Q Consensus 890 l~~~~~~------------------------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 945 (1075)
...+... ......+++..+.+++.|+++||+|+|+. +|+||||||+||+++.+
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC
Confidence 2111100 01123478888999999999999999999 99999999999999999
Q ss_pred CCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhh
Q 042958 946 NEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNL 1022 (1075)
Q Consensus 946 ~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~ 1022 (1075)
+.+||+|||+++........ .....+++.|+|||++.+..++.++||||+|+++|||++ |..||.....
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------- 232 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------- 232 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence 99999999998866433221 123345789999999988889999999999999999998 8888764322
Q ss_pred hhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1023 NIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
....+.+....... ...+.+..+.+++.+||+.+|++||+++||++.|+
T Consensus 233 ~~~~~~i~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 233 QDVIEMIRNRQVLP---CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 11222222222211 12234456899999999999999999999999875
No 93
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-34 Score=307.47 Aligned_cols=249 Identities=24% Similarity=0.396 Sum_probs=194.4
Q ss_pred HHHHHHhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecc
Q 042958 808 EEIIRATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHV 886 (1075)
Q Consensus 808 ~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 886 (1075)
++++-...+.+..++||.|.||.||.|.|+ ..-.||||.++.. ....++|+.|+.+|+.++|||+|+++|+|...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 455555667888899999999999999876 3668999999753 33478999999999999999999999999876
Q ss_pred ccchhhe--ecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccc
Q 042958 887 RHSLAMI--LSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIA 956 (1075)
Q Consensus 887 ~~~l~~~--~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 956 (1075)
..++.+- +.+.. ....++-...+.+|.||+.|++||..+ .+|||||.++|+|+.++..+||+|||++
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchh
Confidence 5543332 11111 122234445578999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcee-ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCC
Q 042958 957 KFLKPDSSNWT-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRL 1034 (1075)
Q Consensus 957 ~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1075)
+.+..+..... ...-.+.|.|||.+....++.|+|||+|||++||+.| |-.||.+++... .+..++.- .++
T Consensus 413 RlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq-----VY~LLEkg--yRM 485 (1157)
T KOG4278|consen 413 RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYGLLEKG--YRM 485 (1157)
T ss_pred hhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH-----HHHHHhcc--ccc
Confidence 99876543221 1223689999999999999999999999999999998 888987654322 22222221 223
Q ss_pred CCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1035 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..| +.+++.++++|+.||+..|.+||+++|+-+.+|
T Consensus 486 ~~P----eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 486 DGP----EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred cCC----CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 332 345667999999999999999999999988775
No 94
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.3e-32 Score=296.17 Aligned_cols=240 Identities=24% Similarity=0.424 Sum_probs=185.3
Q ss_pred cCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
++|++.+.||+|+||.||+|+++++..+|+|.+..... ..+.+..|++++++++||||+++++++......+.+ +
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv-~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV-T 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE-E
Confidence 45788899999999999999988888999998764321 136788999999999999999999998765543222 2
Q ss_pred cCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 SNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 ~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+.. .....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 111 1123578999999999999999999999 999999999999999999999999999986543322
Q ss_pred c-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCCCCCcCc
Q 042958 965 N-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLPTPSCIV 1041 (1075)
Q Consensus 965 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 1041 (1075)
. .....++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+... +...+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--------~~~~~i~~~~~~~~~~--- 224 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--------EVVEMISRGFRLYRPK--- 224 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCCCCCCC---
Confidence 1 122335668999999998889999999999999999999 89998643221 111111111 111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+..+.+++.+||+.+|++||+++|+++.|.
T Consensus 225 -~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 225 -LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 12346899999999999999999999999873
No 95
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.3e-32 Score=309.60 Aligned_cols=235 Identities=21% Similarity=0.301 Sum_probs=181.2
Q ss_pred ceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|+.. +++.||||++...........+.+..|.++++.+ +||||+++++++...+..+. +++...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~l-v~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFF-VMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEE-EEeCCC
Confidence 46999999999999654 6889999998754322233345677899988866 89999999999877654322 222211
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05591 80 GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTF 156 (321)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccc
Confidence 234578888999999999999999999 99999999999999999999999999998654444444456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ....+.+.......+. ..+.++.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--------~~~~~~i~~~~~~~p~----~~~~~~~ 224 (321)
T cd05591 157 CGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--------DDLFESILHDDVLYPV----WLSKEAV 224 (321)
T ss_pred ccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCC----CCCHHHH
Confidence 799999999999998999999999999999999999999974332 1112222222222221 1234688
Q ss_pred HHHHHccCCCCCCCC-------CHHHHHh
Q 042958 1050 EVAISCLDENPESRP-------TMPKVSQ 1071 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RP-------s~~evl~ 1071 (1075)
+++.+|+++||++|| +++++++
T Consensus 225 ~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 225 SILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 999999999999999 7777764
No 96
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.5e-32 Score=308.57 Aligned_cols=230 Identities=23% Similarity=0.331 Sum_probs=177.5
Q ss_pred ceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecCc-
Q 042958 821 HCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNN- 897 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~~- 897 (1075)
+.||+|+||.||+|..+ +++.||||++...........+.+..|..++... +||||+++++++...+..+. ++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~i-v~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFF-VMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEE-EEcCCC
Confidence 46999999999999654 6899999998653222223356677888888876 79999999998876554322 22221
Q ss_pred --------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 898 --------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 898 --------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
.....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (320)
T cd05590 80 GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTF 156 (320)
T ss_pred CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccc
Confidence 1234578889999999999999999999 99999999999999999999999999988654333344456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. ..+.++.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~~~~----~~~~~~~ 224 (320)
T cd05590 157 CGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEVVYPT----WLSQDAV 224 (320)
T ss_pred ccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCCCCCCC----CCCHHHH
Confidence 799999999999998999999999999999999999999974322 1112222222222221 2234689
Q ss_pred HHHHHccCCCCCCCCCH
Q 042958 1050 EVAISCLDENPESRPTM 1066 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~ 1066 (1075)
+++.+|++.||++||++
T Consensus 225 ~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 225 DILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHcccCHHHCCCC
Confidence 99999999999999998
No 97
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.1e-33 Score=302.64 Aligned_cols=237 Identities=31% Similarity=0.525 Sum_probs=176.9
Q ss_pred CceecccCceEEEEEEEC-----CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 820 EHCIGKGGQGSVYKAELA-----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.+.||.|+||.||+|.+. .+..|+||+++.. ......+.|.+|++.+++++||||++++|+|...+.. .+++
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~-~lv~ 80 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPL-FLVM 80 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSE-EEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccccccccccccccccccccc-cccc
Confidence 468999999999999776 3568999999643 3333468899999999999999999999999854432 2222
Q ss_pred cCc-----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 895 SNN-----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 895 ~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+.. .....+++.++.+|+.||++||.|||+. +++|+||+++||+++.++.+||+|||++.......
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 211 1135789999999999999999999999 99999999999999999999999999998763222
Q ss_pred Cc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcC
Q 042958 964 SN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCI 1040 (1075)
Q Consensus 964 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1075)
.. .........|+|||.+.+..++.++||||||+++||+++ |+.||..... ......+.+..... .
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--------~~~~~~~~~~~~~~---~ 226 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--------EEIIEKLKQGQRLP---I 226 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--------HHHHHHHHTTEETT---S
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccce---e
Confidence 21 223456789999999999889999999999999999999 7889764322 11112222221111 1
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
....+..+.+++.+||+.||++||||.|+++.|
T Consensus 227 ~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 122344589999999999999999999999876
No 98
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-33 Score=319.27 Aligned_cols=242 Identities=22% Similarity=0.326 Sum_probs=188.3
Q ss_pred hcCCCCCceecccCceEEEEEEECCC-CEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEE-eecc---c
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASG-EIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGF-CSHV---R 887 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~~---~ 887 (1075)
..++++.++|.+|||+.||.|....+ ..||+|++... ++...+.+.+|+++|+.++ |||||.+++. .... .
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 45567779999999999999966554 99999998754 5566788999999999995 9999999993 2211 1
Q ss_pred cc----hhheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccc
Q 042958 888 HS----LAMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFG 954 (1075)
Q Consensus 888 ~~----l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 954 (1075)
.. +.|.+... .....|++.++++|++|+++|+++||.. .|+|||||||-+|||++.+++.||||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 11 12222221 1123488999999999999999999987 4589999999999999999999999999
Q ss_pred cccccCCCCCce---------eccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh
Q 042958 955 IAKFLKPDSSNW---------TELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL 1022 (1075)
Q Consensus 955 la~~~~~~~~~~---------~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~ 1022 (1075)
.|.......... -....|+.|+|||++. +...++|+|||++||+||-++....||+....
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------- 263 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------- 263 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------
Confidence 997544332111 1234789999999874 66789999999999999999999999974322
Q ss_pred hhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1023 NIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
-.+++.++..|. ...++..+.+||+.||+.||.+||++.||++.+
T Consensus 264 ----laIlng~Y~~P~--~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 264 ----LAILNGNYSFPP--FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred ----eeEEeccccCCC--CccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 234444444442 246777899999999999999999999998865
No 99
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.6e-32 Score=307.44 Aligned_cols=235 Identities=20% Similarity=0.278 Sum_probs=179.8
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcC-ceeeEEEEeeccccchhhe
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR-NIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~l~~~ 893 (1075)
+|++.+.||+|+||.||+|... +++.||||++...........+.+..|++++..++|+ +|+++++++...+.. +++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~-~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL-YFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEE-EEE
Confidence 5788899999999999999654 6789999998754322233356788899999999765 588888887665433 222
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 80 MEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC
Confidence 22211 234578899999999999999999999 999999999999999999999999999875433333
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. ..
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~~~~~~~----~~ 224 (324)
T cd05587 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--------DELFQSIMEHNVSYPK----SL 224 (324)
T ss_pred ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCC----CC
Confidence 44456799999999999999999999999999999999999999974322 1112222222222221 23
Q ss_pred HHHHHHHHHHccCCCCCCCCCH
Q 042958 1045 LISIVEVAISCLDENPESRPTM 1066 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~ 1066 (1075)
+..+.+++.+|+++||.+|+++
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 225 SKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CHHHHHHHHHHhhcCHHHcCCC
Confidence 3468899999999999999986
No 100
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.3e-32 Score=298.39 Aligned_cols=245 Identities=26% Similarity=0.454 Sum_probs=191.9
Q ss_pred HHhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
+...+|++.+.||+|+||.||+|...+++.||+|.+.... .....++..|+.+++.++||||+++++++......+.
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence 3456789999999999999999988879999999987532 2234678899999999999999999999876654332
Q ss_pred heecCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 892 MILSNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 892 ~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
++.... .....+++.++++++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+..+..
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 221111 1234678999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCCCCCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLPTPSC 1039 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1039 (1075)
.........++..|+|||...+..++.++||||||+++|+|++ |+.||...... .....+... +.+.+
T Consensus 157 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~-- 226 (261)
T cd05148 157 DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--------EVYDQITAGYRMPCP-- 226 (261)
T ss_pred ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHHhCCcCCCC--
Confidence 3332333446778999999988889999999999999999998 89998643321 111111111 11211
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1040 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+||+.||++|||++|+.+.|+
T Consensus 227 --~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 227 --AKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred --CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 233456899999999999999999999999886
No 101
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=287.33 Aligned_cols=238 Identities=28% Similarity=0.413 Sum_probs=193.0
Q ss_pred CCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecc-ccchhhee
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHV-RHSLAMIL 894 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~l~~~~ 894 (1075)
|.+.+++|+|+||.||+|.+ .+|+.||||.+... ...+++..|+.+|++.+.|+||++||.|... +..++|.+
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 45668899999999999944 57999999998543 2267899999999999999999999966543 44444444
Q ss_pred cCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 895 SNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 895 ~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
...+ ..+++.+.++..+....++||+|||.. .-+|||||+.|||++.+|.+|++|||.|..+.+.-...
T Consensus 110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR 186 (502)
T KOG0574|consen 110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR 186 (502)
T ss_pred cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence 3332 256788899999999999999999998 78999999999999999999999999998776555556
Q ss_pred eccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 967 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
.+..||+.|||||++..-.|..++||||+|++..||..|++||.++.+.... -++..+.|+....+..-+.
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI---------FMIPT~PPPTF~KPE~WS~ 257 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI---------FMIPTKPPPTFKKPEEWSS 257 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee---------EeccCCCCCCCCChHhhhh
Confidence 6789999999999999999999999999999999999999999876654321 1222222222233444566
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1047 SIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
++.++++.|+.+.|++|.|+.++++
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 8999999999999999999999876
No 102
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.6e-32 Score=306.01 Aligned_cols=234 Identities=24% Similarity=0.319 Sum_probs=176.3
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|.. .+++.||||+++..........+.+..|..++... +||||+++++++...... .++++...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~-~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHL-FFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEE-EEEEcCCC
Confidence 4699999999999965 46889999998754322223344566677777654 899999999988765543 22222211
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~ 156 (316)
T cd05592 80 GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTF 156 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccc
Confidence 234578888899999999999999999 99999999999999999999999999998654443444556
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+ .....++.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~~----~~~~~~~~ 224 (316)
T cd05592 157 CGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--------ELFDSILNDRPHFP----RWISKEAK 224 (316)
T ss_pred cCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCC----CCCCHHHH
Confidence 7999999999999989999999999999999999999999743221 11112222221111 12334588
Q ss_pred HHHHHccCCCCCCCCCHH-HHH
Q 042958 1050 EVAISCLDENPESRPTMP-KVS 1070 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~-evl 1070 (1075)
+++.+||+.||++||++. +++
T Consensus 225 ~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 225 DCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHHHccCCHHHcCCChHHHH
Confidence 999999999999999875 454
No 103
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.6e-32 Score=301.42 Aligned_cols=244 Identities=23% Similarity=0.423 Sum_probs=187.9
Q ss_pred hcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
.++|.+.+.||+|+||.||+|... +++.||||.+..... .+..+.+.+|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 356888899999999999999653 357899999875432 234578999999999999999999999987764
Q ss_pred cchhheecCc-----------------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC
Q 042958 888 HSLAMILSNN-----------------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF 944 (1075)
Q Consensus 888 ~~l~~~~~~~-----------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 944 (1075)
..+.+ ++.. .....+++.+...++.|++.|+.|||+. +++||||||+||+++.
T Consensus 82 ~~~lv-~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~ 157 (280)
T cd05049 82 PPIMV-FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGY 157 (280)
T ss_pred CeEEE-EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcC
Confidence 43222 2111 1123478889999999999999999999 9999999999999999
Q ss_pred CCCceEeccccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhh
Q 042958 945 DNEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLN 1021 (1075)
Q Consensus 945 ~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~ 1021 (1075)
++.+|++|||+++....... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||......
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~------ 231 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE------ 231 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH------
Confidence 99999999999986543321 1123345788999999999999999999999999999998 99998643221
Q ss_pred hhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1022 LNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+.+.....+.+ ....+..+.+++.+||++||++||+++||++.|+
T Consensus 232 --~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 --EVIECITQGRLLQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --HHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11122222222211 1223456999999999999999999999999885
No 104
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.6e-32 Score=307.30 Aligned_cols=235 Identities=20% Similarity=0.284 Sum_probs=181.0
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhhe
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
+|++.+.||+|+||.||+|... +++.||||++...........+.+..|..++... +|++|+++++++...+..+ ++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~-lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLY-FV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEE-EE
Confidence 5788899999999999999654 6889999998754322333345677788888877 5899999999887655432 22
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC
Confidence 22211 234578889999999999999999999 999999999999999999999999999986543333
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+. ..
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--------~~~~~~i~~~~~~~p~----~~ 224 (323)
T cd05616 157 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPK----SM 224 (323)
T ss_pred ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCC----cC
Confidence 44456799999999999999999999999999999999999999974322 1112222222222221 23
Q ss_pred HHHHHHHHHHccCCCCCCCCCH
Q 042958 1045 LISIVEVAISCLDENPESRPTM 1066 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~ 1066 (1075)
+.++.+++.+|+++||++|+++
T Consensus 225 s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 225 SKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CHHHHHHHHHHcccCHHhcCCC
Confidence 4468999999999999999985
No 105
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.9e-32 Score=295.02 Aligned_cols=238 Identities=26% Similarity=0.408 Sum_probs=181.1
Q ss_pred eecccCceEEEEEEE---CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc
Q 042958 822 CIGKGGQGSVYKAEL---ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 822 ~lG~G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
.||+|+||.||+|.+ .++..||+|+++... ......+++..|+.+++.++||||+++++++......+.+.+....
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCC
Confidence 589999999999954 357899999986543 2334567899999999999999999999998654433222221111
Q ss_pred -------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce---ec
Q 042958 899 -------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW---TE 968 (1075)
Q Consensus 899 -------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~---~~ 968 (1075)
....+++..+.+++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+....... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 224578899999999999999999999 99999999999999999999999999998765443221 12
Q ss_pred cccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHH
Q 042958 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047 (1075)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1075)
..++..|+|||.+....++.++||||||+++|||++ |+.||....... ......... ..+.+ ...+.+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~i~~~~--~~~~~----~~~~~~ 226 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-----VTQMIESGE--RMECP----QRCPPE 226 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHCCC--CCCCC----CCCCHH
Confidence 234578999999988889999999999999999998 999987432211 111111111 11111 123456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1048 IVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1048 l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+.+++.+||++||++||++++|++.|+
T Consensus 227 l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 227 MYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred HHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 899999999999999999999999875
No 106
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2e-32 Score=312.76 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=186.6
Q ss_pred HHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc--
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-- 888 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 888 (1075)
...++|+..+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC-hHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 3457899999999999999999954 46899999998764322 2335678899999999999999999998864332
Q ss_pred ---chhheecCccc------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 889 ---SLAMILSNNAA------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 889 ---~l~~~~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
..+++++.... ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 93 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred ccceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 11122211111 23467888899999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh--------------hhhh
Q 042958 960 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN--------------LNIA 1025 (1075)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~--------------~~~~ 1025 (1075)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||............ ....
T Consensus 170 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 170 GTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred CCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 432 2223457899999999999999999999999999999999999999743321100000 0000
Q ss_pred hhhccCC----------------CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1026 LDEMLDP----------------RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1026 ~~~~~~~----------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+... ..+............+.+++.+|++.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 0000000 000000011122346889999999999999999999986
No 107
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.9e-32 Score=298.65 Aligned_cols=244 Identities=25% Similarity=0.396 Sum_probs=182.9
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCC----EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
++|++.+.||+|+||.||+|.+. +|+ .||+|++... .......++..|+..++++.||||+++++++......
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccE
Confidence 57888899999999999999653 454 4788887533 2223346788899999999999999999998654332
Q ss_pred hhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 890 LAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 890 l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+.+..... .....+++.....++.||+.|++|||+. +++||||||+||++++++.+||+|||.++....
T Consensus 85 ~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 22221111 1234578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 962 DSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 962 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
... ......++..|+|||++.+..++.++||||||+++||+++ |+.||........ ....... ...+.+.
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~--~~~~~~~ 234 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-----PDLLEKG--ERLAQPQ 234 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCC--CcCCCCC
Confidence 322 1233456789999999998889999999999999999998 9999864322110 0111110 1111111
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+...+.+++.+||..||++|||+.|+++.|+
T Consensus 235 ----~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~ 266 (279)
T cd05111 235 ----ICTIDVYMVMVKCWMIDENVRPTFKELANEFT 266 (279)
T ss_pred ----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 12335788999999999999999999999774
No 108
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-32 Score=303.45 Aligned_cols=247 Identities=25% Similarity=0.331 Sum_probs=202.7
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccch
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~l 890 (1075)
..+.|+..+.||+|.||.||++..+ +|+.+|+|.+.+.........+.+.+|+.+|+++. |||||.++++|+.....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3467888899999999999999655 59999999998765544444678999999999997 999999999998766432
Q ss_pred -hheecCccc-----cC-CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC----CCceEecccccccc
Q 042958 891 -AMILSNNAA-----AK-DLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD----NEAHVSDFGIAKFL 959 (1075)
Q Consensus 891 -~~~~~~~~~-----~~-~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~DfGla~~~ 959 (1075)
.+.+...+. .. .+++.....++.|++.|+.|||+. +|+|||+||+|+++... +.+|++|||+|...
T Consensus 113 lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 222222111 11 288889999999999999999998 99999999999999644 47999999999998
Q ss_pred CCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCc
Q 042958 960 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSC 1039 (1075)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1075)
.. .......+||+.|+|||++....|+.++||||+||++|.|++|..||...... .....+....+.....
T Consensus 190 ~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~--------~~~~~i~~~~~~f~~~ 260 (382)
T KOG0032|consen 190 KP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF--------EIFLAILRGDFDFTSE 260 (382)
T ss_pred cC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh--------HHHHHHHcCCCCCCCC
Confidence 87 55677889999999999999999999999999999999999999999754322 2223444455544455
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1040 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+...+..+.+++..|+..||.+|+|+.++++
T Consensus 261 ~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 261 PWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 66777888999999999999999999999986
No 109
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.3e-32 Score=293.82 Aligned_cols=241 Identities=23% Similarity=0.394 Sum_probs=185.6
Q ss_pred cCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
++|++.+.||+|+||.||+|+..++..||+|.+..... ..+++.+|+.++++++||||+++++++......+ .++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIY-IVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcE-EEE
Confidence 45778899999999999999887777899999864322 1367899999999999999999999987655432 222
Q ss_pred cCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 SNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 ~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+.. .....+++.++++++.||+.|++|||+. +++|+||||+||+++.++.+||+|||.++.......
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 211 1123689999999999999999999999 999999999999999999999999999986654322
Q ss_pred c-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 965 N-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 965 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
. .....++..|+|||+..+..++.++||||||+++|||++ |+.||....... ....+........ ..
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~---~~ 224 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--------TVEKVSQGLRLYR---PH 224 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------HHHHHhcCCCCCC---CC
Confidence 1 112335678999999988889999999999999999998 999986433211 1111111111111 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+..+.+++.+||+.||++||++.++++.++
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 225 LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 12456899999999999999999999999875
No 110
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2e-32 Score=302.73 Aligned_cols=244 Identities=23% Similarity=0.271 Sum_probs=184.7
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.|+..+.||+|+||.||++.. .+++.||||++.............+.+|+.++++++||||+++++++......+..+.
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 477889999999999999965 4789999999865332222334567889999999999999999998876554322211
Q ss_pred -cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 -SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 -~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
... .....+++.....++.|++.|+.|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 111 1124578999999999999999999999 99999999999999999999999999998754322
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......|+..|+|||++.+..++.++||||+|+++|||++|+.||....... ........+...... .....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~----~~~~~ 228 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV----KREEVERRVKEDQEE----YSEKF 228 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh----HHHHHHHHhhhcccc----cCccc
Confidence 2234578999999999998889999999999999999999999997432211 000111111111111 12234
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
+..+.+++.+||+.||++|| +++++++
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 229 SEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred CHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 45689999999999999999 8888865
No 111
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=8.3e-32 Score=295.14 Aligned_cols=249 Identities=24% Similarity=0.326 Sum_probs=192.2
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|... +|+.||+|.++.....+....+.+.+|++++++++|+|++++++++.........+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999665 89999999887543334444678999999999999999999999887654332221
Q ss_pred e-cC-----------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 894 L-SN-----------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 894 ~-~~-----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
. .. ......+++.++..++.|+++|++|||+. +|+||||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 1 11 11234578899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
.........++..|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.......+.. ..
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~--~~ 230 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEKCDYPPL--PA 230 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc------HHHHHhhhhcCCCCCC--Ch
Confidence 433334456889999999999888999999999999999999999998532210 0111111111111111 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+||..+|++|||+.+|+++|+
T Consensus 231 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~ 263 (267)
T cd08224 231 DHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263 (267)
T ss_pred hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHH
Confidence 234456899999999999999999999999874
No 112
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.5e-32 Score=296.96 Aligned_cols=242 Identities=22% Similarity=0.365 Sum_probs=187.1
Q ss_pred hcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.++|++.++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+..+.+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv- 79 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII- 79 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE-
Confidence 46788899999999999999988888899999976422 2256889999999999999999999988765543222
Q ss_pred ecCc-----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 894 LSNN-----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 894 ~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
++.. .....+++.+++.++.|+++|++|||+. +++||||||+||+++.++.+|++|||.+......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 2111 1234578889999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcC
Q 042958 963 SSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCI 1040 (1075)
Q Consensus 963 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1075)
... .....++..|+|||++.+..++.++||||||+++|||++ |+.||....... ........ ...+..
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~~~~~--~~~~~~--- 226 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-----VMSALQRG--YRMPRM--- 226 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-----HHHHHHcC--CCCCCC---
Confidence 221 122345678999999988889999999999999999998 999986322111 11111111 111111
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+.++.+++.+||+.+|++||+++++.+.|+
T Consensus 227 -~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 227 -ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred -CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 123346899999999999999999999999886
No 113
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.7e-32 Score=323.55 Aligned_cols=246 Identities=23% Similarity=0.292 Sum_probs=188.3
Q ss_pred HHhcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc--
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-- 888 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 888 (1075)
...++|++.+.||+|+||+||+|. ..+|+.||||++...... ......+.+|+..+..++|+|++++++.+.....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 445799999999999999999995 457999999998754332 3345678899999999999999998876643221
Q ss_pred -----chhheecCcc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceE
Q 042958 889 -----SLAMILSNNA-------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV 950 (1075)
Q Consensus 889 -----~l~~~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 950 (1075)
.+.+++++.. ....+++.....++.|++.||+|+|+. +|+||||||+||+++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 1122222211 124578888899999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCC--CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhh
Q 042958 951 SDFGIAKFLKPDS--SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDE 1028 (1075)
Q Consensus 951 ~DfGla~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1075)
+|||+++.+.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--------~~~~~~ 256 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--------EEVMHK 256 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHH
Confidence 9999998765332 123346799999999999999999999999999999999999999964321 111122
Q ss_pred ccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
........ .....+.++.+++.+||+.||++||++.|+++.
T Consensus 257 ~~~~~~~~---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 TLAGRYDP---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HhcCCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 22221111 112234569999999999999999999999763
No 114
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.98 E-value=3.4e-32 Score=299.79 Aligned_cols=245 Identities=22% Similarity=0.346 Sum_probs=185.1
Q ss_pred HhcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecc
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHV 886 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 886 (1075)
+.++|+..+.||+|+||.||+|... ++..||||++.... ......++.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 5678999999999999999998643 35679999986432 223356789999999999999999999998765
Q ss_pred ccchhheecCcc-------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCC
Q 042958 887 RHSLAMILSNNA-------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE 947 (1075)
Q Consensus 887 ~~~l~~~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 947 (1075)
...+.+ ++... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.
T Consensus 82 ~~~~lv-~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~ 157 (277)
T cd05062 82 QPTLVI-MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 157 (277)
T ss_pred CCeEEE-EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCC
Confidence 443222 11110 012357788899999999999999998 9999999999999999999
Q ss_pred ceEeccccccccCCCCCce--eccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhh
Q 042958 948 AHVSDFGIAKFLKPDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNI 1024 (1075)
Q Consensus 948 ~kl~DfGla~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 1024 (1075)
++++|||+++......... ....+++.|+|||++.+..++.++||||||+++|||++ |..||...... .
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~ 229 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------Q 229 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------H
Confidence 9999999998654332211 12345778999999998889999999999999999999 78888643221 1
Q ss_pred hhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1025 ALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+.......+.. ....+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 230 ~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 230 VLRFVMEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1111112221111 1123346899999999999999999999999875
No 115
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.98 E-value=6.6e-32 Score=294.56 Aligned_cols=243 Identities=21% Similarity=0.378 Sum_probs=187.3
Q ss_pred hcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.++|++.++||+|+||.||+|..++++.||+|.+..... ..+++.+|+.++++++||||+++++++......+.+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e 80 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITE 80 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEE
Confidence 467888999999999999999888899999999875332 2467889999999999999999999875433222221
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.... .....+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 81 YMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred cCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 1111 1234578899999999999999999998 999999999999999999999999999987653222
Q ss_pred -ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 965 -NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 965 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
......++..|+|||++.+..++.++||||||+++||+++ |+.||....... ........ .+.+.+ .
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~--~~~~~~----~ 226 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-----VIQNLERG--YRMPRP----D 226 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-----HHHHHHcC--CCCCCC----C
Confidence 1223345678999999988889999999999999999999 999986432211 11111111 111111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+.++.+++.+||+.+|++||+++++.+.|+
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 227 NCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 23346999999999999999999999999886
No 116
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.98 E-value=2.6e-32 Score=314.43 Aligned_cols=244 Identities=20% Similarity=0.246 Sum_probs=181.0
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.|+..+.||+|+||.||+|.. .+++.||||++...........+.+.+|++++++++||||+++++++.+....+ +++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~-lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLY-FVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEE-EEE
Confidence 578889999999999999954 578999999987543333344567899999999999999999999998765432 222
Q ss_pred cCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC-
Q 042958 895 SNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS- 964 (1075)
Q Consensus 895 ~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~- 964 (1075)
+... ....+++.....++.||+.||+|||+. +|+||||||+||+++.++++||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 2221 134577888888999999999999999 999999999999999999999999999764311000
Q ss_pred ----------------------------------------------ceeccccccCccCccccccCCCCcccchHhHHHH
Q 042958 965 ----------------------------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVL 998 (1075)
Q Consensus 965 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~v 998 (1075)
.....+||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 0123469999999999998899999999999999
Q ss_pred HHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHH--ccCCCCCCCCCHHHHHh
Q 042958 999 ALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAIS--CLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 999 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~evl~ 1071 (1075)
+|||++|+.||........ .............+.. ...+.++.+++.+ |+..+|..||+++|+++
T Consensus 238 l~elltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~----~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTET----QLKVINWENTLHIPPQ----VKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHHHhCCCCCcCCCHHHH----HHHHHccccccCCCCC----CCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 9999999999974322110 0000000001112211 1233457888887 55667777999999975
No 117
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.98 E-value=5.2e-32 Score=304.63 Aligned_cols=184 Identities=20% Similarity=0.337 Sum_probs=145.8
Q ss_pred CceecccCceEEEEEEEC---CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc-hhheec
Q 042958 820 EHCIGKGGQGSVYKAELA---SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS-LAMILS 895 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-l~~~~~ 895 (1075)
.++||+|+||.||+|... +++.||+|.+..... ...+.+|++++++++||||+++++++...... +.++++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 468999999999999754 567899999864321 24577899999999999999999987543221 111111
Q ss_pred Cc-----------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeee----CCCCCceEeccc
Q 042958 896 NN-----------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLL----DFDNEAHVSDFG 954 (1075)
Q Consensus 896 ~~-----------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfG 954 (1075)
.. .....+++.....++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 81 YAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred ccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 11 1123478888999999999999999999 99999999999999 456789999999
Q ss_pred cccccCCCCC---ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCc
Q 042958 955 IAKFLKPDSS---NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDF 1011 (1075)
Q Consensus 955 la~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~ 1011 (1075)
+++.+..... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 9987654322 23346789999999998764 588999999999999999999999964
No 118
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.98 E-value=2.9e-32 Score=306.08 Aligned_cols=235 Identities=22% Similarity=0.286 Sum_probs=181.0
Q ss_pred ceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|... +++.||||+++............+..|.++++.+ +||||+++++++...+..+ ++++...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~-lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLF-FVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEE-EEEcCCC
Confidence 46999999999999654 6889999998754322233346677899998888 7999999999887655432 2222221
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (318)
T cd05570 80 GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTF 156 (318)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccce
Confidence 234688999999999999999999999 99999999999999999999999999997643333333445
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+ ...+..+.
T Consensus 157 ~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--------~~~~~i~~~~~~~~----~~~~~~~~ 224 (318)
T cd05570 157 CGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--------ELFQSILEDEVRYP----RWLSKEAK 224 (318)
T ss_pred ecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--------HHHHHHHcCCCCCC----CcCCHHHH
Confidence 7899999999999999999999999999999999999999743321 11122222222222 12334689
Q ss_pred HHHHHccCCCCCCCCCH-----HHHHh
Q 042958 1050 EVAISCLDENPESRPTM-----PKVSQ 1071 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~-----~evl~ 1071 (1075)
+++.+||+.||++||++ .++++
T Consensus 225 ~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 225 SILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 99999999999999999 77764
No 119
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-32 Score=270.35 Aligned_cols=239 Identities=24% Similarity=0.360 Sum_probs=184.4
Q ss_pred CCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccc-hhhe
Q 042958 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHS-LAMI 893 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~-l~~~ 893 (1075)
.+....+|.|..|.||+++.+ +|...|||.+.... ..+..++++..++++..- .+|+||+.+|||...... +.|.
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 344567999999999999665 68999999998653 344457788888886665 489999999999765443 3333
Q ss_pred ecC-------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 894 LSN-------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 894 ~~~-------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
+.. ....+++++.-.-++...+..||.||.+++ +|+|||+||+|||+|+.|++|+||||.+.++-+. ...
T Consensus 172 lMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-kAh 248 (391)
T KOG0983|consen 172 LMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-KAH 248 (391)
T ss_pred HHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecc-ccc
Confidence 221 112445777777789999999999999885 9999999999999999999999999999887644 334
Q ss_pred eccccccCccCccccccC---CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccC---CCCCCCCcC
Q 042958 967 TELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD---PRLPTPSCI 1040 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 1040 (1075)
+..+|-+.|||||.+... +|+.++||||||+.++|+.||+.||...... .+.+-.+.+ +.++.
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-------Fe~ltkvln~ePP~L~~---- 317 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-------FEVLTKVLNEEPPLLPG---- 317 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-------HHHHHHHHhcCCCCCCc----
Confidence 556889999999998643 6889999999999999999999999743221 111222222 33332
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....++.+.+++..|+++|+.+||...++++
T Consensus 318 ~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 318 HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 2235677999999999999999999999876
No 120
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.98 E-value=7.7e-33 Score=316.08 Aligned_cols=243 Identities=22% Similarity=0.291 Sum_probs=187.8
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|... +|+.||||++.............+..|+++++.++||||+++++++.+....+. +
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l-v 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYL-V 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEE-E
Confidence 46888999999999999999654 799999999875432232345678999999999999999999998876554322 2
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC-
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS- 963 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~- 963 (1075)
++... ....+++...+.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 22211 124678899999999999999999998 99999999999999999999999999998765433
Q ss_pred ----------------------------CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCcc
Q 042958 964 ----------------------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM 1015 (1075)
Q Consensus 964 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~ 1015 (1075)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 1223456899999999999999999999999999999999999999743321
Q ss_pred ccchhhhhhhhhhccC--CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHhh
Q 042958 1016 SSSSLNLNIALDEMLD--PRLPTPSCIVQDKLISIVEVAISCLDENPESRPT-MPKVSQL 1072 (1075)
Q Consensus 1016 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 1072 (1075)
.....+.. .....+.. ...+..+.+++.+|+. ||.+||+ ++|+++.
T Consensus 237 --------~~~~~i~~~~~~~~~p~~--~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 --------ETYNKIINWKESLRFPPD--PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred --------HHHHHHhccCCcccCCCC--CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11111111 11111111 1134568999999997 9999999 9999863
No 121
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.98 E-value=8e-32 Score=295.00 Aligned_cols=243 Identities=25% Similarity=0.423 Sum_probs=186.9
Q ss_pred hcCCCCCceecccCceEEEEEEEC----CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
.++|+..+.||+|+||.||+|.+. +...||||++.... ......+|.+|+.++++++||||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 357889999999999999999764 24579999987543 233456789999999999999999999988765443
Q ss_pred hhheecCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 890 LAMILSNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 890 l~~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
+. +++.. .....+++.++++++.|++.|++|||+. +|+||||||+||++++++.++++|||+++..
T Consensus 81 ~i-v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 81 MI-ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EE-EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 22 22211 1123678999999999999999999998 9999999999999999999999999999987
Q ss_pred CCCCCcee--ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCC
Q 042958 960 KPDSSNWT--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLP 1035 (1075)
Q Consensus 960 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1035 (1075)
........ ...++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+... ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 228 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--------DVIKAVEDGYRLP 228 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--------HHHHHHHcCCCCC
Confidence 53222222 2234678999999998899999999999999999998 99998532211 111111111 112
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+ ...+..+.+++.+||+.+|++||+++||++.|+
T Consensus 229 ~~----~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 229 PP----MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263 (266)
T ss_pred CC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11 233456899999999999999999999999875
No 122
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-32 Score=298.16 Aligned_cols=238 Identities=28% Similarity=0.421 Sum_probs=187.2
Q ss_pred CCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc-hhhee
Q 042958 817 FDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS-LAMIL 894 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-l~~~~ 894 (1075)
|+..+.||.|+||.||.| +.++.+.||||++........+...++..|++++.+++|||++.+-|+|...... ++|.+
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 455577999999999999 5568899999999776555555668899999999999999999999988654443 33333
Q ss_pred cCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee
Q 042958 895 SNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT 967 (1075)
Q Consensus 895 ~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 967 (1075)
.-.. ..+++...++..|..+.+.||+|||++ +.||||||+.|||+++.|.+|++|||.|..+.+. .
T Consensus 108 ClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA----n 180 (948)
T KOG0577|consen 108 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA----N 180 (948)
T ss_pred HhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch----h
Confidence 3222 245678888899999999999999999 9999999999999999999999999999887654 4
Q ss_pred ccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 968 ELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
.++|||+|||||++. .+.|+-|+||||+|++-.|+...++|.--...+. .-.-+..--.|-++ ..+-
T Consensus 181 sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-----ALYHIAQNesPtLq-----s~eW 250 (948)
T KOG0577|consen 181 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNESPTLQ-----SNEW 250 (948)
T ss_pred cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-----HHHHHHhcCCCCCC-----Cchh
Confidence 579999999999885 4579999999999999999999999964221111 00011111112222 2344
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+..+..|+..|+++-|.+|||.+++++
T Consensus 251 S~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 251 SDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 456999999999999999999999875
No 123
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.98 E-value=3.5e-32 Score=326.99 Aligned_cols=246 Identities=26% Similarity=0.389 Sum_probs=184.2
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.++||+|+||.||+|.. .+|+.||||++...........+++.+|++++++++||||+++++++.+.+..+..
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV- 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT- 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE-
Confidence 5788999999999999999965 46899999998765444444567899999999999999999999998765543222
Q ss_pred ecCcc--------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecc
Q 042958 894 LSNNA--------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953 (1075)
Q Consensus 894 ~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 953 (1075)
++... .....++...++++.||++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEec
Confidence 11110 112345677789999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCC------------------CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCcc
Q 042958 954 GIAKFLKPDS------------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM 1015 (1075)
Q Consensus 954 Gla~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~ 1015 (1075)
|+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9998762111 0112246899999999999999999999999999999999999999642221
Q ss_pred ccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHhhh
Q 042958 1016 SSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRP-TMPKVSQLL 1073 (1075)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L 1073 (1075)
... . ......+.... ...+.+..+.+++.+|++.||++|| +++++.+.|
T Consensus 238 ki~---~---~~~i~~P~~~~---p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~L 287 (932)
T PRK13184 238 KIS---Y---RDVILSPIEVA---PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDL 287 (932)
T ss_pred hhh---h---hhhccChhhcc---ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 100 0 01111111000 1123345689999999999999997 556666554
No 124
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-32 Score=302.13 Aligned_cols=238 Identities=24% Similarity=0.410 Sum_probs=187.8
Q ss_pred CCCceecccCceEEEEEEEC--CCC--EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 818 DDEHCIGKGGQGSVYKAELA--SGE--IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 818 ~~~~~lG~G~~g~Vy~~~~~--~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
...+.||+|+||.|++|.|+ .|+ .||||.++...... ...+|.+|+.+|.+++|||++++||+..+....+++.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~E 190 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFE 190 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhh
Confidence 34578999999999999775 344 58999998754332 4689999999999999999999999988754444443
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+... .....|-......++.|||.|+.||..+ +.||||+..+|+++-....+||+|||+.+-+..+..
T Consensus 191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 3221 2234456666778999999999999999 999999999999999999999999999998876655
Q ss_pred ceec---cccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhc-cCCCCCCCCc
Q 042958 965 NWTE---LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEM-LDPRLPTPSC 1039 (1075)
Q Consensus 965 ~~~~---~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1039 (1075)
.+.. ..-.+.|.|||.+...+++.++|||+|||++|||+| |..||-+..... .++.+ ...+++.+
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q--------IL~~iD~~erLpRP-- 337 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ--------ILKNIDAGERLPRP-- 337 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH--------HHHhccccccCCCC--
Confidence 4432 234678999999999999999999999999999998 889987554322 12222 12344444
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1040 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..++.+++++++.||...|.+|||+..+.+.
T Consensus 338 --k~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 338 --KYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred --CCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 3455679999999999999999999999743
No 125
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.98 E-value=1.2e-32 Score=309.56 Aligned_cols=231 Identities=23% Similarity=0.277 Sum_probs=179.2
Q ss_pred ceecccCceEEEEEEE----CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecC
Q 042958 821 HCIGKGGQGSVYKAEL----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSN 896 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~ 896 (1075)
+.||+|+||.||++.. .+|+.||+|++...... ......+..|++++++++||||+++++++......+ ++++.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLY-LILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEE-EEEcC
Confidence 5799999999999854 36899999998753221 122356778999999999999999999987755433 22222
Q ss_pred cc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee
Q 042958 897 NA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT 967 (1075)
Q Consensus 897 ~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 967 (1075)
.. ....+++.....++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee
Confidence 21 134578999999999999999999999 999999999999999999999999999987654434445
Q ss_pred ccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHH
Q 042958 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1075)
...|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+.......+. ..+..
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--------~~~~~~i~~~~~~~p~----~~~~~ 224 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--------KETMTMILKAKLGMPQ----FLSPE 224 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--------HHHHHHHHcCCCCCCC----CCCHH
Confidence 56799999999999988899999999999999999999999974322 1112222222222221 22345
Q ss_pred HHHHHHHccCCCCCCCCCHHH
Q 042958 1048 IVEVAISCLDENPESRPTMPK 1068 (1075)
Q Consensus 1048 l~~li~~cl~~dP~~RPs~~e 1068 (1075)
+.+++.+||++||++||++.+
T Consensus 225 ~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 225 AQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHhhcCHhHcCCCCC
Confidence 889999999999999999655
No 126
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-32 Score=284.44 Aligned_cols=250 Identities=20% Similarity=0.285 Sum_probs=197.6
Q ss_pred HHHHHHHhcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEE
Q 042958 807 YEEIIRATNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFY 880 (1075)
Q Consensus 807 ~~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 880 (1075)
..|+....++++....+.+|.||.||.|.|. +.+.|.||.++.. .+..+...+..|...+..+.|||+..+.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCcccee
Confidence 3556666788888899999999999999554 3456778888754 3445577899999999999999999999
Q ss_pred EEeeccccchhhe------------ec-----CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeC
Q 042958 881 GFCSHVRHSLAMI------------LS-----NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLD 943 (1075)
Q Consensus 881 ~~~~~~~~~l~~~------------~~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 943 (1075)
+++.+......+. +. +....+.++..+...++.|++.|++|||++ +|||.||.++|+++|
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 9987654332221 11 223345567788889999999999999999 999999999999999
Q ss_pred CCCCceEeccccccccCCCCCce--eccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchh
Q 042958 944 FDNEAHVSDFGIAKFLKPDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSL 1020 (1075)
Q Consensus 944 ~~~~~kl~DfGla~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~ 1020 (1075)
+..++|++|=.+++.+.+.+... ...-.+..||+||.+....|+.++|||||||+||||+| |+.||..+++.+..
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~-- 508 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME-- 508 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH--
Confidence 99999999999999888765432 23345789999999999999999999999999999998 99999766553322
Q ss_pred hhhhhhhhccC-CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1021 NLNIALDEMLD-PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1021 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
....| .++..|. .++.++..++..||+.+|++||+++|++.-|
T Consensus 509 ------~ylkdGyRlaQP~----NCPDeLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 509 ------HYLKDGYRLAQPF----NCPDELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred ------HHHhccceecCCC----CCcHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 12222 2344433 3455699999999999999999999998765
No 127
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=7.3e-32 Score=298.21 Aligned_cols=242 Identities=20% Similarity=0.349 Sum_probs=184.1
Q ss_pred cCCCCCceecccCceEEEEEEE-----CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
++|++.+.||+|+||.||+|.. .++..||+|.+.... ......++.+|++++++++||||+++++++......
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4678889999999999999964 356789999987532 233456789999999999999999999988765443
Q ss_pred hhheecCcc--------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeC
Q 042958 890 LAMILSNNA--------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLD 943 (1075)
Q Consensus 890 l~~~~~~~~--------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 943 (1075)
+.. ++... ....+++.+...++.|++.|++|||+. +++||||||+||+++
T Consensus 83 ~lv-~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~ 158 (283)
T cd05090 83 CML-FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIG 158 (283)
T ss_pred EEE-EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEc
Confidence 221 11110 023467888899999999999999999 999999999999999
Q ss_pred CCCCceEeccccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchh
Q 042958 944 FDNEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSL 1020 (1075)
Q Consensus 944 ~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~ 1020 (1075)
.++.+|++|||+++....... ......++..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~----- 233 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ----- 233 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----
Confidence 999999999999987643321 1223345678999999988889999999999999999998 99998643211
Q ss_pred hhhhhhhhccCCC-CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1021 NLNIALDEMLDPR-LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1021 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+...... .+.+ ...+..+.+++.+||++||++||++.+|.+.|+
T Consensus 234 ---~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 234 ---EVIEMVRKRQLLPCS----EDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred ---HHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 1111111111 1111 123456899999999999999999999999875
No 128
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.98 E-value=2e-32 Score=314.08 Aligned_cols=242 Identities=22% Similarity=0.267 Sum_probs=183.5
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|.. .+|+.||||++.............+.+|+++++.++||||+++++++.+....+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv- 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI- 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE-
Confidence 4788999999999999999965 47899999998753222233456788999999999999999999998876543322
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 2221 1234578999999999999999999999 999999999999999999999999999875432110
Q ss_pred --------------------------------------ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCC
Q 042958 965 --------------------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 1006 (1075)
Q Consensus 965 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~ 1006 (1075)
.....+||+.|+|||++.+..++.++||||+||++|||++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 001246899999999999999999999999999999999999
Q ss_pred CCCCccCccccchhhhhhhhhhccC--CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCC---HHHHHh
Q 042958 1007 HPRDFISSMSSSSLNLNIALDEMLD--PRLPTPSCIVQDKLISIVEVAISCLDENPESRPT---MPKVSQ 1071 (1075)
Q Consensus 1007 ~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1071 (1075)
.||....... ....+.. ..+..+. ....+..+.+++.+|+. +|.+|++ ++|+++
T Consensus 237 ~Pf~~~~~~~--------~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 237 PPFCSDNPQE--------TYRKIINWKETLQFPD--EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCHHH--------HHHHHHcCCCccCCCC--CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9997433211 1111111 1111111 11223468899999996 9999998 888865
No 129
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.98 E-value=6.8e-32 Score=297.76 Aligned_cols=245 Identities=24% Similarity=0.426 Sum_probs=185.7
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCC----EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
.++|+..+.||+|+||.||+|++ .+|+ .||+|++.... .....+++.+|+.+++.++||||+++++++.....
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTV 83 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCc
Confidence 46788889999999999999964 3555 48999986542 23345778999999999999999999999876443
Q ss_pred chhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 SLAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 ~l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
.+.+..... .....+++...+.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 322221111 1134588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCce--eccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 961 PDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 961 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
...... ....++..|+|||...+..++.++||||||+++||+++ |..||+...... ........ ...+.+
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~--~~~~~~ 233 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE-----IPDLLEKG--ERLPQP 233 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCC--CcCCCC
Confidence 433221 12234678999999998899999999999999999998 999986432211 11111111 111111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+||+.||++||++.|+++.|+
T Consensus 234 ----~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 234 ----PICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred ----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 123456899999999999999999999998764
No 130
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=3.2e-32 Score=306.61 Aligned_cols=231 Identities=23% Similarity=0.290 Sum_probs=174.1
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHH-HHhcCCcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVK-ALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||+||+|.. .+|+.||+|++............++..|.. +++.++||||+++++++...+..+ ++++...
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~-lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLY-FVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEE-EEEcCCC
Confidence 4699999999999965 479999999986532222222344555554 567899999999999887655432 2222211
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++.....++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTF 156 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccc
Confidence 234578888899999999999999999 99999999999999999999999999997644333334456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+.+.......+. ..+..+.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~~~~~----~~~~~~~ 224 (323)
T cd05575 157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--------AEMYDNILNKPLRLKP----NISVSAR 224 (323)
T ss_pred cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCCCCCCC----CCCHHHH
Confidence 799999999999999999999999999999999999999864321 1112222222222211 2244689
Q ss_pred HHHHHccCCCCCCCCCHH
Q 042958 1050 EVAISCLDENPESRPTMP 1067 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~ 1067 (1075)
+++.+|++.||++||++.
T Consensus 225 ~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 225 HLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHhhcCHHhCCCCC
Confidence 999999999999999984
No 131
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.98 E-value=3.6e-32 Score=311.20 Aligned_cols=241 Identities=22% Similarity=0.265 Sum_probs=179.3
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||+||+|.. .+++.||||++......+......+..|+.++.+++||||+++++++.+....+ ++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~-lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLY-LI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEE-EE
Confidence 4788999999999999999955 468999999986533223334567889999999999999999999987755432 22
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 22211 235678899999999999999999999 999999999999999999999999999976532110
Q ss_pred -----------------------------------ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCC
Q 042958 965 -----------------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 1009 (1075)
Q Consensus 965 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~ 1009 (1075)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 012347999999999999999999999999999999999999999
Q ss_pred CccCccccchhhhhhhhhhccC----CCCCCCCcCcHHHHHHHHHHHHHccC--CCCCCCCCHHHHHh
Q 042958 1010 DFISSMSSSSLNLNIALDEMLD----PRLPTPSCIVQDKLISIVEVAISCLD--ENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl~ 1071 (1075)
....... ....+.. ..++... ....++.+++.+++. .++..||+++||++
T Consensus 237 ~~~~~~~--------~~~~i~~~~~~~~~p~~~----~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 237 CSETPQE--------TYKKVMNWKETLIFPPEV----PISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCCCHHH--------HHHHHHcCcCcccCCCcC----CCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 7432211 1111111 1112111 122346777776443 34446789999976
No 132
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.98 E-value=7.2e-32 Score=298.92 Aligned_cols=243 Identities=22% Similarity=0.396 Sum_probs=185.4
Q ss_pred hcCCCCCceecccCceEEEEEEE------CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL------ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
..+|.+.+.||+|+||.||++.. .++..||+|.+... .....+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 46788899999999999999964 23566999988643 2233567999999999999999999999987654
Q ss_pred cchhheecCc----------------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC
Q 042958 888 HSLAMILSNN----------------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD 945 (1075)
Q Consensus 888 ~~l~~~~~~~----------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 945 (1075)
..+.++ +.. .....+++.++++++.|++.||+|||+. +++||||||+||+++.+
T Consensus 81 ~~~lv~-e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 81 PLIMVF-EYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred ccEEEE-EcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 432222 111 1122489999999999999999999999 99999999999999999
Q ss_pred CCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhh
Q 042958 946 NEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNL 1022 (1075)
Q Consensus 946 ~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~ 1022 (1075)
+.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~------- 229 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------- 229 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------
Confidence 99999999999865433211 122345778999999998899999999999999999998 89998643221
Q ss_pred hhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1023 NIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+.+........ ....+.++.+++.+||+.||.+|||+.||.+.|+
T Consensus 230 -~~~~~i~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 230 -EVIECITQGRVLQR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred -HHHHHHHcCCcCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 11122222221111 1123346999999999999999999999998875
No 133
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.98 E-value=7.9e-32 Score=294.17 Aligned_cols=244 Identities=23% Similarity=0.432 Sum_probs=187.1
Q ss_pred HhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
..++|++.+.||+|+||.||+|...+++.||+|.++.... ..+++.+|++++++++||||+++++++...+..+.+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIV 79 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeee
Confidence 3467888999999999999999877788999999865321 246788999999999999999999998766543222
Q ss_pred eecC-c---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 893 ILSN-N---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 893 ~~~~-~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+-.. . ..+..+++..+.+++.|++.|+.|||+. +++||||||+||++++++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 2111 0 1124588999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCc-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcC
Q 042958 963 SSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCI 1040 (1075)
Q Consensus 963 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1075)
... ......+..|+|||++.+..++.++||||||+++|||++ |+.||....... ........ ...+.+
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~~--~~~~~~--- 226 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-----VLQQVDQG--YRMPCP--- 226 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcC--CCCCCC---
Confidence 211 111223458999999999899999999999999999999 999986432110 00111111 111111
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+|++.+|++||+++++.+.|+
T Consensus 227 -~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 227 -PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred -CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 223456999999999999999999999999886
No 134
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1.6e-32 Score=296.50 Aligned_cols=245 Identities=25% Similarity=0.403 Sum_probs=192.6
Q ss_pred HHhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccch
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l 890 (1075)
.....|++.++||+||.+.||++...+.+.||+|++.... .+.....-|..|+..|.++ .|.+||++++|-.. +.++
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-d~~l 435 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-DGYL 435 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-CceE
Confidence 3457789999999999999999988888999999876543 3445578899999999999 69999999999876 5556
Q ss_pred hheecCccc----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 891 AMILSNNAA----------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 891 ~~~~~~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
+|+++.... .....| .++.+.+|++.|+.++|.+ ||||.||||.|+++- .|.+||+|||.|..+.
T Consensus 436 YmvmE~Gd~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 436 YMVMECGDIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQ 510 (677)
T ss_pred EEEeecccccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccC
Confidence 666654321 223345 6778899999999999999 999999999999985 6899999999999888
Q ss_pred CCCCc--eeccccccCccCccccccCC-----------CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhh
Q 042958 961 PDSSN--WTELAGTYGYVAPELAYTMK-----------VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALD 1027 (1075)
Q Consensus 961 ~~~~~--~~~~~gt~~y~aPE~~~~~~-----------~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 1027 (1075)
.+... ....+||+.||+||.+.... .++++||||+||++|+|+.|+.||..+.. ....+.
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~aKl~ 583 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QIAKLH 583 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HHHHHH
Confidence 77654 34578999999999886432 56789999999999999999999974322 334556
Q ss_pred hccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 EMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+.++....+..... ...++.++++.|++.||++||+..|+++
T Consensus 584 aI~~P~~~Iefp~~~-~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 584 AITDPNHEIEFPDIP-ENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hhcCCCccccccCCC-CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 666663321111111 1123899999999999999999999986
No 135
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.98 E-value=5e-32 Score=303.70 Aligned_cols=234 Identities=23% Similarity=0.280 Sum_probs=176.6
Q ss_pred ceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|..+ +|+.||+|+++..........+.+..|..++... +||||+++++++...+..+ ++++...
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~-lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLF-FVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEE-EEECCCC
Confidence 46999999999999654 6899999998753221122245567788887754 8999999999987765432 2222211
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (316)
T cd05620 80 GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTF 156 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceecc
Confidence 134578888899999999999999999 99999999999999999999999999987543333344556
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.......+. ....++.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~ 224 (316)
T cd05620 157 CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIRVDTPHYPR----WITKESK 224 (316)
T ss_pred CCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC----CCCHHHH
Confidence 7999999999999999999999999999999999999999643221 111111111111111 1234588
Q ss_pred HHHHHccCCCCCCCCCHH-HHH
Q 042958 1050 EVAISCLDENPESRPTMP-KVS 1070 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~-evl 1070 (1075)
+++.+|++.||++||++. ++.
T Consensus 225 ~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 225 DILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHccCCHHHcCCChHHHH
Confidence 999999999999999984 554
No 136
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.98 E-value=9.8e-32 Score=293.24 Aligned_cols=242 Identities=24% Similarity=0.424 Sum_probs=187.0
Q ss_pred hcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.++|++.+.||+|+||.||+|...++..||+|.+...... .+.+.+|+.++++++|++++++++++......+.+.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e 80 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTE 80 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEE
Confidence 3578889999999999999998888889999998753322 357899999999999999999999886543332222
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.... .....+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+..+.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 1111 1133578999999999999999999999 999999999999999999999999999987654322
Q ss_pred c-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCCCCCcCc
Q 042958 965 N-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLPTPSCIV 1041 (1075)
Q Consensus 965 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 1041 (1075)
. .....++..|+|||+..+..++.++||||||+++|||++ |+.||...... ...+.+... ..+. .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~----~ 225 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--------EVLEQVERGYRMPC----P 225 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCC----C
Confidence 1 122335668999999988889999999999999999999 89998643221 111111111 1111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+|++++|++|||++++.+.|+
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 226 QDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 233456999999999999999999999999886
No 137
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.98 E-value=6.1e-32 Score=310.26 Aligned_cols=247 Identities=22% Similarity=0.367 Sum_probs=185.0
Q ss_pred HhcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeec
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSH 885 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 885 (1075)
..++|++.+.||+|+||.||+|... .+..||||++.... .....+.+.+|+++++++. ||||++++++|..
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 3578889999999999999999642 23469999986542 2333578999999999995 9999999999876
Q ss_pred cccchhhe-ecCc-------------------------------------------------------------------
Q 042958 886 VRHSLAMI-LSNN------------------------------------------------------------------- 897 (1075)
Q Consensus 886 ~~~~l~~~-~~~~------------------------------------------------------------------- 897 (1075)
....+.++ +...
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 54322211 1000
Q ss_pred ------------------------------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCee
Q 042958 898 ------------------------------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVL 941 (1075)
Q Consensus 898 ------------------------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nil 941 (1075)
.....+++.++.+++.|+++|++|||+. +|+||||||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 0012477888899999999999999999 9999999999999
Q ss_pred eCCCCCceEeccccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccc
Q 042958 942 LDFDNEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSS 1018 (1075)
Q Consensus 942 l~~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~ 1018 (1075)
++.++.+||+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~- 348 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST- 348 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-
Confidence 99999999999999986543322 1223456788999999998889999999999999999997 9999864321100
Q ss_pred hhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1019 SLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
........ .+.+.+ ...+..+.+++.+||+.||++||++.+|.++|+
T Consensus 349 ---~~~~~~~~--~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~ 395 (400)
T cd05105 349 ---FYNKIKSG--YRMAKP----DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE 395 (400)
T ss_pred ---HHHHHhcC--CCCCCC----ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence 00011111 111111 233456899999999999999999999999875
No 138
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.98 E-value=5.5e-32 Score=303.17 Aligned_cols=234 Identities=22% Similarity=0.300 Sum_probs=176.5
Q ss_pred ceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|... +++.||||+++..........+.+..|..+++.. +||||+++++++.+.+..+ ++++...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~-lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLF-FVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEE-EEEeCCC
Confidence 46999999999999654 6889999998753221122235566788888764 9999999999987765432 2222221
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++.+...++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (316)
T cd05619 80 GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTF 156 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeee
Confidence 134578889999999999999999999 99999999999999999999999999997643333334456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ....++.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~~~ 224 (316)
T cd05619 157 CGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--------ELFQSIRMDNPCYPR----WLTREAK 224 (316)
T ss_pred cCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCc----cCCHHHH
Confidence 7999999999999989999999999999999999999999643211 111111111111111 1234588
Q ss_pred HHHHHccCCCCCCCCCHH-HHH
Q 042958 1050 EVAISCLDENPESRPTMP-KVS 1070 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~-evl 1070 (1075)
+++.+||++||++||++. ++.
T Consensus 225 ~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 225 DILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHhccCHhhcCCChHHHH
Confidence 999999999999999997 554
No 139
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.98 E-value=2.4e-32 Score=312.65 Aligned_cols=245 Identities=20% Similarity=0.251 Sum_probs=185.3
Q ss_pred HhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
..++|++.+.||+|+||.||+|.. .+++.||+|++...........+.+..|+.+++.++||||+++++++.+....+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~- 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY- 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE-
Confidence 356889999999999999999965 468999999986432222233456789999999999999999999887655432
Q ss_pred heecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 892 MILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 892 ~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++++... ....++......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 120 lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 2222211 123467788888999999999999999 99999999999999999999999999998765432
Q ss_pred C-ceeccccccCccCccccccC----CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCC--CCC
Q 042958 964 S-NWTELAGTYGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPR--LPT 1036 (1075)
Q Consensus 964 ~-~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 1036 (1075)
. ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+.... +..
T Consensus 197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~~~~~~~ 268 (370)
T cd05596 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMDHKNSLTF 268 (370)
T ss_pred cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcCCCcCCC
Confidence 2 22345799999999988654 3788999999999999999999999743321 1112222211 111
Q ss_pred CCcCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHh
Q 042958 1037 PSCIVQDKLISIVEVAISCLDENPES--RPTMPKVSQ 1071 (1075)
Q Consensus 1037 ~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1071 (1075)
+ .....+.++.+++.+|++.+|++ ||+++|+++
T Consensus 269 ~--~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 269 P--DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred C--CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 1 11123456899999999999988 999999975
No 140
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.98 E-value=4.8e-32 Score=299.19 Aligned_cols=246 Identities=21% Similarity=0.323 Sum_probs=188.3
Q ss_pred HhcCCCCCceecccCceEEEEEEECC-----CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELAS-----GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
..++|++.+.||+|+||.||+|.... +..||+|++... ......+.+.+|+.++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 35788889999999999999997654 688999998643 23344677899999999999999999999887643
Q ss_pred cchhheecC------------cc-----ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceE
Q 042958 888 HSLAMILSN------------NA-----AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV 950 (1075)
Q Consensus 888 ~~l~~~~~~------------~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 950 (1075)
.....+... .. ....+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|+
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEE
Confidence 322222111 11 114588999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhh
Q 042958 951 SDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALD 1027 (1075)
Q Consensus 951 ~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1027 (1075)
+|||+++.+...... .....++..|+|||++.+..++.++||||||+++||+++ |+.||....... ......
T Consensus 159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~ 233 (280)
T cd05043 159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-----MAAYLK 233 (280)
T ss_pred CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-----HHHHHH
Confidence 999999876543221 122345678999999998889999999999999999999 999987432211 111111
Q ss_pred hccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1028 EMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
. ....+.+ ...+.++.+++.+||+.||++|||+.||++.|+
T Consensus 234 ~--~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 234 D--GYRLAQP----INCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred c--CCCCCCC----CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1 1111111 123456899999999999999999999999875
No 141
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.98 E-value=4.5e-32 Score=303.74 Aligned_cols=251 Identities=17% Similarity=0.245 Sum_probs=183.8
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|+.+ +++.||+|++....... ....+.+|++++++++||||+++++++...+..+.+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv- 82 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV- 82 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC--cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE-
Confidence 57888999999999999999654 68899999987543222 234677899999999999999999998765543222
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.++.......
T Consensus 83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 2211 1133478888999999999999999999 999999999999999999999999999986544433
Q ss_pred ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh-------hhhh------hhcc
Q 042958 965 NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL-------NIAL------DEML 1030 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~-------~~~~------~~~~ 1030 (1075)
......+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+...... .... ....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 3444568899999998865 457899999999999999999999996433211100000 0000 0000
Q ss_pred CCCCCCCC-----cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1031 DPRLPTPS-----CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1031 ~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+...+... ......+.++.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00011000 001123446889999999999999999999986
No 142
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.98 E-value=1.1e-31 Score=295.04 Aligned_cols=242 Identities=25% Similarity=0.379 Sum_probs=181.3
Q ss_pred CCCCceecccCceEEEEEEECC-CC--EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-----
Q 042958 817 FDDEHCIGKGGQGSVYKAELAS-GE--IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH----- 888 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 888 (1075)
|.+.+.||+|+||.||+|...+ ++ .||+|.++.... .....+.+..|+++++.++||||++++++|.....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567889999999999997653 33 699998875432 23345788999999999999999999998753221
Q ss_pred chhheecCc---------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecc
Q 042958 889 SLAMILSNN---------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953 (1075)
Q Consensus 889 ~l~~~~~~~---------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 953 (1075)
...++++.. .....+++.....++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 111111111 1123478999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhcc
Q 042958 954 GIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEML 1030 (1075)
Q Consensus 954 Gla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1030 (1075)
|+++.+...... .....+++.|+|||+..+..++.++||||||+++|||++ |+.||....... ..+.+.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--------~~~~~~ 228 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE--------IYDYLR 228 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHHHH
Confidence 999876543221 122345678999999999999999999999999999999 888986432211 111111
Q ss_pred CC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1031 DP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1031 ~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.. ..+.+ ...+..+.+++.+||+.||++|||++|+++.|+
T Consensus 229 ~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 269 (272)
T cd05075 229 QGNRLKQP----PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELE 269 (272)
T ss_pred cCCCCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11 11111 123345899999999999999999999999875
No 143
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.98 E-value=1.2e-31 Score=291.57 Aligned_cols=237 Identities=23% Similarity=0.379 Sum_probs=179.2
Q ss_pred eecccCceEEEEEEEC---CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc-
Q 042958 822 CIGKGGQGSVYKAELA---SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN- 897 (1075)
Q Consensus 822 ~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~- 897 (1075)
.||+|+||.||+|.+. ++..||+|++.... .....+++.+|+.++++++||||+++++++......+.+.+...
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCC
Confidence 3899999999999653 35679999986542 23345679999999999999999999999865433333322211
Q ss_pred -------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee---
Q 042958 898 -------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT--- 967 (1075)
Q Consensus 898 -------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~--- 967 (1075)
.....+++.++++++.|++.|++|||+. +++||||||+||+++.++.+|++|||++...........
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 1234578999999999999999999999 999999999999999999999999999986554332211
Q ss_pred ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
...++..|+|||++.+..++.++||||||+++||+++ |+.||....... ........ .+... ....+.
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~--~~~~~----~~~~~~ 225 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-----VMSFIEQG--KRLDC----PAECPP 225 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-----HHHHHHCC--CCCCC----CCCCCH
Confidence 1223578999999988889999999999999999996 999986433211 00111111 11111 122345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1047 SIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
++.+++.+||+.||++||++.+|.+.|+
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~l~ 253 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEERMR 253 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 6899999999999999999999999886
No 144
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.98 E-value=8.8e-32 Score=297.55 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=184.5
Q ss_pred CCCCceecccCceEEEEEEE-----CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-ch
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-SL 890 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~l 890 (1075)
|+..+.||+|+||+||++.. .+++.||+|.+..... ....+.+.+|++++++++||||+++++++..... .+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 37889999999999987642 4678999999875421 2235678899999999999999999998865432 22
Q ss_pred hheecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 891 AMILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 891 ~~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
.++++... ....+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 84 ~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred EEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 23322211 123588999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc---eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccc-----h-hhhhhhhhhccCCC
Q 042958 963 SSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSS-----S-LNLNIALDEMLDPR 1033 (1075)
Q Consensus 963 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~-----~-~~~~~~~~~~~~~~ 1033 (1075)
... .....++..|+|||.+.+..++.++||||||+++|||++|+.||......... . ........+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG 240 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC
Confidence 221 12234567799999998888999999999999999999999998643211000 0 00000111111111
Q ss_pred CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1034 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+ .....+..+.+++.+||+.||++|||+++|++.|+
T Consensus 241 ~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~ 279 (283)
T cd05080 241 MRLP--CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279 (283)
T ss_pred CCCC--CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 1110 11233457999999999999999999999999875
No 145
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.98 E-value=3.4e-32 Score=312.72 Aligned_cols=252 Identities=21% Similarity=0.277 Sum_probs=184.1
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc----ch
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH----SL 890 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~l 890 (1075)
+|+..+.||+|+||.||+|.. .+|+.||||++..... .....+++.+|+++++.++||||+++++++..... .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478889999999999999965 5799999999865322 22335678899999999999999999999876541 11
Q ss_pred hheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 891 AMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 891 ~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+++++.. .....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 2222111 1235688999999999999999999999 9999999999999999999999999999865433
Q ss_pred CC-ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh--------------hhhh
Q 042958 963 SS-NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL--------------NIAL 1026 (1075)
Q Consensus 963 ~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~--------------~~~~ 1026 (1075)
.. ......+++.|+|||++.+. .++.++||||+||++|||++|+.||............. ....
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 22 23345678999999998774 47899999999999999999999997543221000000 0000
Q ss_pred hhccCCC-CCCC-----CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1027 DEMLDPR-LPTP-----SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1027 ~~~~~~~-~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+... ...+ .........++.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0000000 0000 0011122456889999999999999999999986
No 146
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.98 E-value=1.5e-31 Score=294.84 Aligned_cols=247 Identities=22% Similarity=0.323 Sum_probs=186.5
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|.. .+++.||+|++.... .....+++.+|++++++++||||+++++++...+.... +
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l-v 77 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISI-C 77 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEE-E
Confidence 4678889999999999999954 578999999986542 23345679999999999999999999999877554322 2
Q ss_pred ecCccc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceec
Q 042958 894 LSNNAA-----AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE 968 (1075)
Q Consensus 894 ~~~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 968 (1075)
++.... ...+++.....++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++...... ....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~ 152 (279)
T cd06619 78 TEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKT 152 (279)
T ss_pred EecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccC
Confidence 222211 23467888899999999999999999 9999999999999999999999999999865432 2234
Q ss_pred cccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHH
Q 042958 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048 (1075)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1048 (1075)
..|+..|+|||++.+..++.++||||||+++|||++|+.||.......... ..........+...+.. .....+.++
T Consensus 153 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~ 229 (279)
T cd06619 153 YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-MPLQLLQCIVDEDPPVL--PVGQFSEKF 229 (279)
T ss_pred CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-chHHHHHHHhccCCCCC--CCCcCCHHH
Confidence 578999999999999899999999999999999999999986432211110 00111111111111110 011233468
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1049 VEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1049 ~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.+++.+|++.+|++||+++|+++.
T Consensus 230 ~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 230 VHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHhhCChhhCCCHHHHhcC
Confidence 999999999999999999999864
No 147
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.98 E-value=5.7e-32 Score=310.03 Aligned_cols=254 Identities=21% Similarity=0.271 Sum_probs=185.9
Q ss_pred HhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc---
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH--- 888 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 888 (1075)
..++|+..+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+.+++.++||||+++++++.....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 457899999999999999999954 46899999998754322 2334678899999999999999999998754331
Q ss_pred --chhheecCccc------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 --SLAMILSNNAA------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 --~l~~~~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
.++++++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 12222222211 22467888899999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh--------------hhhh
Q 042958 961 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL--------------NIAL 1026 (1075)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~--------------~~~~ 1026 (1075)
.. .......+|+.|+|||++.+..++.++||||+||++|||++|+.||............. ....
T Consensus 178 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 178 TS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred CC-CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 32 22234578999999999999999999999999999999999999997433211000000 0000
Q ss_pred hhccCCC----------------CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1027 DEMLDPR----------------LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1027 ~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
......+ .+............+.+++.+|++.||.+|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 00000011112346889999999999999999999986
No 148
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.98 E-value=1.3e-31 Score=291.54 Aligned_cols=242 Identities=25% Similarity=0.360 Sum_probs=188.9
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|++|.||+|.. .+++.||+|.+...... ....+++.+|++++++++|||++++++++......+..+.
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 477789999999999999965 46899999998654322 3345789999999999999999999999876544322221
Q ss_pred cC-c---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 SN-N---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 ~~-~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.. . .....+++.++++++.|++.|+.|||+. +++||||||+||+++.++.++++|||+++.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 11 1 1134678899999999999999999999 999999999999999999999999999987765444
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......|++.|+|||+..+..++.++||||||+++|||++|+.||..... ............+.. ....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~---~~~~ 225 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--------GALILKIIRGVFPPV---SQMY 225 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCC---cccc
Confidence 34455788999999999998899999999999999999999999864331 111111222222111 1134
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...+.+++.+||+.+|++||++.|+++.
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 226 SQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 4569999999999999999999999864
No 149
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.98 E-value=3.2e-32 Score=311.05 Aligned_cols=247 Identities=19% Similarity=0.247 Sum_probs=184.4
Q ss_pred HHhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccch
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l 890 (1075)
...++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++......+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999664 68899999986432222233456889999999999999999999987655432
Q ss_pred hheecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 891 AMILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 891 ~~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
++++... ....+++.....++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|......
T Consensus 120 -lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 -MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred -EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 2222211 123467888899999999999999999 9999999999999999999999999999876533
Q ss_pred CC-ceeccccccCccCccccccCC----CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCC--CC
Q 042958 963 SS-NWTELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPR--LP 1035 (1075)
Q Consensus 963 ~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 1035 (1075)
.. ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .....+.... +.
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--------~~~~~i~~~~~~~~ 267 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--------GTYSKIMDHKNSLN 267 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCcccC
Confidence 22 223567999999999987543 778999999999999999999999743221 1122222211 11
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHhh
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPES--RPTMPKVSQL 1072 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 1072 (1075)
.+ .....+..+.+++..|+..++.+ ||+++|+++.
T Consensus 268 ~p--~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 FP--EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CC--CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11 11223446888999999855543 8899998763
No 150
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.98 E-value=9.4e-32 Score=303.05 Aligned_cols=238 Identities=21% Similarity=0.292 Sum_probs=179.8
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|.. .+++.||+|++...........+.+..|+.++.++ +||+|+++++++......+ ++++...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~-lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLF-LVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEE-EEEeCCC
Confidence 4699999999999965 46889999999764433334456788999999888 6999999999887655432 2222211
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (327)
T cd05617 80 GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTF 156 (327)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecc
Confidence 134688999999999999999999999 99999999999999999999999999998644333344556
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||+.......... .......+.......+. ..+..+.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~p~----~~~~~~~ 231 (327)
T cd05617 157 CGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNT-EDYLFQVILEKPIRIPR----FLSVKAS 231 (327)
T ss_pred cCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccccc-HHHHHHHHHhCCCCCCC----CCCHHHH
Confidence 799999999999999999999999999999999999999964332111100 01111222222222221 2234588
Q ss_pred HHHHHccCCCCCCCCCHH
Q 042958 1050 EVAISCLDENPESRPTMP 1067 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~ 1067 (1075)
+++.+|+++||++||++.
T Consensus 232 ~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 232 HVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred HHHHHHhccCHHHcCCCC
Confidence 999999999999999853
No 151
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.98 E-value=1.2e-31 Score=302.78 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=184.5
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
.++|++.+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|++++++++||||++++++|...+..+ +
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-I 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE-E
Confidence 478999999999999999999665 68899999886542 2234567999999999999999999999998755432 2
Q ss_pred eecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++++.. ....+++.....++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||++..+...
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~- 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-
Confidence 222211 1235778888899999999999999742 7999999999999999999999999999765432
Q ss_pred CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh---------h------------
Q 042958 964 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN---------L------------ 1022 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~---------~------------ 1022 (1075)
......|+..|+|||++.+..++.++|||||||++|||++|+.||............ .
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGR 236 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccc
Confidence 123356899999999999988999999999999999999999998643211000000 0
Q ss_pred ---------------hhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1023 ---------------NIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1023 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
......+.....+ .........++.+++.+||++||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 237 PLSSYGPDSRPPMAIFELLDYIVNEPPP--KLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred hhhhhcccccccccHHHHHHHHhcCCCc--cCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0000000000000 0000112346899999999999999999999975
No 152
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.98 E-value=4.4e-32 Score=316.58 Aligned_cols=247 Identities=23% Similarity=0.239 Sum_probs=178.2
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc-----
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR----- 887 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 887 (1075)
..+|++.+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 46799999999999999999965 468999999885321 23457999999999999999998764321
Q ss_pred --cchhheecCc------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-CceEec
Q 042958 888 --HSLAMILSNN------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-EAHVSD 952 (1075)
Q Consensus 888 --~~l~~~~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~D 952 (1075)
..+.++++.. .....+++...+.++.||+.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 138 ~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 138 KNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 1121222211 1235678888999999999999999999 999999999999999765 799999
Q ss_pred cccccccCCCCCceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------h
Q 042958 953 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------I 1024 (1075)
Q Consensus 953 fGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------~ 1024 (1075)
||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.............. .
T Consensus 215 FGla~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 215 FGSAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED 293 (440)
T ss_pred cccchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 99998765432 22345789999999988764 689999999999999999999999975332111000000 0
Q ss_pred hhh----hccCCCCCCCCc------CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1025 ALD----EMLDPRLPTPSC------IVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1025 ~~~----~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
... ...+..++.... .....+.++.+++.+||++||.+|||+.|+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000 000001111000 01112356899999999999999999999875
No 153
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.98 E-value=1.5e-31 Score=291.95 Aligned_cols=242 Identities=24% Similarity=0.391 Sum_probs=185.9
Q ss_pred hcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
..+|++.++||+|+||.||+|...++..||+|++..... ..+++.+|++++++++||||+++++++......+.+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e 80 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE 80 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEE
Confidence 356889999999999999999877677899999875322 2357899999999999999999999875543322222
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+... .....+++..+..++.|+++||+|+|+. +++||||||+||+++.++.+||+|||.++.+.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 1111 1123478899999999999999999999 999999999999999999999999999987654332
Q ss_pred c-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCCCCCcCc
Q 042958 965 N-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLPTPSCIV 1041 (1075)
Q Consensus 965 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 1041 (1075)
. .....++..|+|||+..+..++.++||||||+++||+++ |+.||...... ......... ..+ ..
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~~~~~~----~~ 225 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYRMP----CP 225 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhcCCCCC----Cc
Confidence 1 123346678999999988889999999999999999999 88888633211 111111111 111 12
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+.+..+.+++.+|+++||++||+++++.+.|+
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 234557899999999999999999999999885
No 154
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.98 E-value=1.4e-31 Score=292.59 Aligned_cols=242 Identities=25% Similarity=0.409 Sum_probs=184.3
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.+|++.+.||+|+||.||+|.. ++++.||+|++... ....+++.+|++++++++||||+++++++......+.++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 4577889999999999999954 46889999998643 122467889999999999999999999987654432221
Q ss_pred -ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 -LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 -~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+... .....+++..++.++.|+++|++|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 1111 1123578999999999999999999999 99999999999999999999999999998765432
Q ss_pred Cce-eccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 964 SNW-TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 964 ~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
... ....++..|+|||++.+..++.++||||||+++|||++ |..||....... ......... +... .
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~--~~~~----~ 227 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYELLEKGY--RMER----P 227 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHHCCC--CCCC----C
Confidence 211 11234568999999999999999999999999999998 999986432111 111111111 1111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+||+.||++||++.|+++.|+
T Consensus 228 ~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 228 EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 223456999999999999999999999999885
No 155
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.98 E-value=3.2e-32 Score=304.34 Aligned_cols=186 Identities=25% Similarity=0.353 Sum_probs=156.8
Q ss_pred CCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-c-----CceeeEEEEeecccc
Q 042958 816 DFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-H-----RNIVKFYGFCSHVRH 888 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~ 888 (1075)
+|.+.+.||+|+||.|.+| +.++++.||||+++.. .....+-..|+.+|..++ | -|+|++++||....+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 8899999999999999999 7778999999999853 445667788999999996 4 379999999988777
Q ss_pred chhheec---------CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC--CceEecccccc
Q 042958 889 SLAMILS---------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN--EAHVSDFGIAK 957 (1075)
Q Consensus 889 ~l~~~~~---------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~--~~kl~DfGla~ 957 (1075)
.+.++.. ....-..++....+.|+.||+.||.+||+. +|||+||||+|||+...+ .+||+|||.|+
T Consensus 263 lciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 263 LCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccc
Confidence 6443310 112234588999999999999999999999 999999999999997654 79999999999
Q ss_pred ccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCc
Q 042958 958 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 1011 (1075)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~ 1011 (1075)
+....-. ..+.+..|+|||++.|.+|+.+.||||||||++||++|.+-|.+
T Consensus 340 ~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 340 FESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred ccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 8654322 56778999999999999999999999999999999999776653
No 156
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.98 E-value=1.8e-31 Score=297.20 Aligned_cols=251 Identities=22% Similarity=0.332 Sum_probs=184.9
Q ss_pred hcCCCCCceecccCceEEEEEEECC-----------------CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCce
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELAS-----------------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 876 (1075)
..+|++.+.||+|+||.||+|.... +..||+|++.... .....+++.+|++++++++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCCE
Confidence 4678999999999999999985532 3468999987542 22346789999999999999999
Q ss_pred eeEEEEeeccccchhheecCcc--------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCC
Q 042958 877 VKFYGFCSHVRHSLAMILSNNA--------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDIS 936 (1075)
Q Consensus 877 v~l~~~~~~~~~~l~~~~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 936 (1075)
+++++++...+..+.++ +... ....+++...+.++.|++.|++|||+. +|+|||||
T Consensus 82 ~~~~~~~~~~~~~~lv~-e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlk 157 (296)
T cd05051 82 ARLLGVCTVDPPLCMIM-EYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLA 157 (296)
T ss_pred eEEEEEEecCCCcEEEE-ecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccc
Confidence 99999987754332222 1110 112578999999999999999999999 99999999
Q ss_pred CCCeeeCCCCCceEeccccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh--CCCCCCcc
Q 042958 937 SKNVLLDFDNEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFI 1012 (1075)
Q Consensus 937 ~~Nill~~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g~~p~~~~ 1012 (1075)
|+||+++.++.++++|||+++....... ......+++.|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999999999986543322 1223456778999999988889999999999999999998 66777532
Q ss_pred CccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1013 SSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..... .......................+.++.+++.+||+.||++|||+.||++.|+
T Consensus 238 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 238 TDQQV----IENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ChHHH----HHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 21110 00000110000100000011123356999999999999999999999999885
No 157
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.98 E-value=4.8e-32 Score=297.92 Aligned_cols=243 Identities=26% Similarity=0.388 Sum_probs=184.0
Q ss_pred HHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccc--
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVR-- 887 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-- 887 (1075)
.+++.|+..+.||+|+||.||+|.. .+++.||+|++..... ...++..|+.+++++ +||||+++++++....
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc----cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 3567788889999999999999965 4689999999865321 235788999999998 7999999999986532
Q ss_pred ---cchhheecCcc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecc
Q 042958 888 ---HSLAMILSNNA-----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953 (1075)
Q Consensus 888 ---~~l~~~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 953 (1075)
..+.++++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 11222222211 134578999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccCccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhh
Q 042958 954 GIAKFLKPDSSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDE 1028 (1075)
Q Consensus 954 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1075)
|++..............|+..|+|||++. +..++.++||||+||++|||++|+.||......... .....
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-----~~~~~ 230 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-----FLIPR 230 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-----HHHhc
Confidence 99987654433444567899999999886 345788999999999999999999998643321100 00011
Q ss_pred ccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...... .....+..+.+++.+||+.||.+|||++|+++
T Consensus 231 ~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NPAPRL-----KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCCC-----CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 001111 11123346899999999999999999999986
No 158
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.98 E-value=1.6e-31 Score=290.77 Aligned_cols=241 Identities=27% Similarity=0.443 Sum_probs=184.4
Q ss_pred cCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.+|++.+.||+|+||.||+|..+++..+|+|.+..... ....+.+|++++++++||||+++++++......+ +++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~-lv~ 78 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIF-IVT 78 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceE-EEE
Confidence 45788899999999999999887788899999864322 1357888999999999999999999887655432 222
Q ss_pred cCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 SNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 ~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+... ....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 2111 123578999999999999999999999 999999999999999999999999999986543221
Q ss_pred ce-eccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 965 NW-TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 965 ~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
.. ....++..|+|||.+.+..++.++||||||+++||+++ |+.||+.....+. ........ ....+ .
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~~~~~--~~~~~----~ 224 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV-----VESVSAGY--RLYRP----K 224 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH-----HHHHHcCC--cCCCC----C
Confidence 11 11223457999999998899999999999999999999 8999874332111 11111111 11111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 225 LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 23456999999999999999999999999873
No 159
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.98 E-value=9.6e-32 Score=317.57 Aligned_cols=238 Identities=21% Similarity=0.214 Sum_probs=183.9
Q ss_pred CCCCCceecccCceEEEEEEE-CC-CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-AS-GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.|.+.+.||+|+||.||+|.. .+ ++.||+|.+... .......+..|+.+++.++|||||+++++|...+..+.+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv- 143 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI- 143 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE-
Confidence 488889999999999999954 34 678899876432 233346778899999999999999999999776543322
Q ss_pred ecCcc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 894 LSNNA-------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 894 ~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
++... ....+++.+...++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 22211 123477888899999999999999999 99999999999999999999999999998765
Q ss_pred CCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 961 PDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 961 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...............
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--------~~~~~~~~~~~~~~~- 291 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--------REIMQQVLYGKYDPF- 291 (478)
T ss_pred CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCC-
Confidence 4322 23345699999999999999999999999999999999999999864221 111222222222111
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+..+.+++.+||++||++||+++|++.
T Consensus 292 --~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 292 --PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1123346899999999999999999999875
No 160
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.98 E-value=3.6e-32 Score=313.09 Aligned_cols=243 Identities=21% Similarity=0.256 Sum_probs=181.0
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|.. .+|+.||||++...........+.+.+|++++++++||||+++++++.+....+ ++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~-lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLY-LI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeE-EE
Confidence 4788899999999999999954 579999999986532223334567889999999999999999999998765432 22
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 22221 134577888889999999999999999 999999999999999999999999999964321100
Q ss_pred -----------------------------------------------ceeccccccCccCccccccCCCCcccchHhHHH
Q 042958 965 -----------------------------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGV 997 (1075)
Q Consensus 965 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~ 997 (1075)
.....+||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 001246899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCccCccccchhhhhhhhhhccC--CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCC---CCHHHHHhh
Q 042958 998 LALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD--PRLPTPSCIVQDKLISIVEVAISCLDENPESR---PTMPKVSQL 1072 (1075)
Q Consensus 998 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 1072 (1075)
++|||++|+.||....... ....+.. ..+..+. ....+.++.+++.+|+. +|.+| +++.|+++.
T Consensus 237 il~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 237 IMFECLIGWPPFCSENSHE--------TYRKIINWRETLYFPD--DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhhhcCCCCCCCCCHHH--------HHHHHHccCCccCCCC--CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 9999999999996432211 1111111 1111111 11233468899999997 66665 599998763
No 161
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=7.2e-32 Score=312.75 Aligned_cols=247 Identities=19% Similarity=0.244 Sum_probs=179.1
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
...|.+.+.||+|+||.||+|... +++.||||... ...+.+|++++++++|+|||++++++...+..+.+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 346889999999999999999654 68899999642 13456899999999999999999988765543322
Q ss_pred eecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 893 ILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 893 ~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+.... .....++|.+++.|+.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 239 ~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 239 LPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 21111 1123589999999999999999999999 999999999999999999999999999987643322
Q ss_pred --ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchh---hhhhhhhhcc--CCCC---
Q 042958 965 --NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSL---NLNIALDEML--DPRL--- 1034 (1075)
Q Consensus 965 --~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~---~~~~~~~~~~--~~~~--- 1034 (1075)
......||..|+|||++.+..++.++|||||||++|||++|..|+........... .....+.... ...+
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 12235699999999999999999999999999999999998876432211100000 0000000000 0000
Q ss_pred ------------------CC-CCcCcH---HHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1035 ------------------PT-PSCIVQ---DKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1035 ------------------~~-~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
+. ....+. .....+.+++.+|++.||++|||+.|+++.
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 000000 122368899999999999999999999874
No 162
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.98 E-value=2.2e-32 Score=309.20 Aligned_cols=240 Identities=22% Similarity=0.272 Sum_probs=184.6
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|.. .+|+.||+|+++..........+.+.+|+.+++.++||||+++++++...... +++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~-~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNL-YLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeE-EEE
Confidence 4688899999999999999955 47999999998764333334456788999999999999999999988765443 222
Q ss_pred ecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 LSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 ~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++... ....+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 22211 124678889999999999999999999 99999999999999999999999999998765443
Q ss_pred Cc-eeccccccCccCccccc------cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccC----C
Q 042958 964 SN-WTELAGTYGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD----P 1032 (1075)
Q Consensus 964 ~~-~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----~ 1032 (1075)
.. .....||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+.. .
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--------~~~~i~~~~~~~ 228 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK--------TYNNIMNFQRFL 228 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH--------HHHHHHcCCCcc
Confidence 32 23357899999999986 4567889999999999999999999996432211 1111111 1
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1033 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.++.. ...+..+.+++.+|++ +|++|||++++++
T Consensus 229 ~~~~~----~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 229 KFPED----PKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCC----CCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11211 1233468899999998 9999999999875
No 163
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-33 Score=303.00 Aligned_cols=241 Identities=24% Similarity=0.369 Sum_probs=187.6
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
-|.+...+|.|+||.||+|..+ ++-..|-|++... +.+..++|.-|+++++...||+||++++.|+..+..+.++.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 3455677999999999999554 4556777887543 33346789999999999999999999987666555444443
Q ss_pred cCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
+..+ -+..+...++.-+++|++.||.|||+. .|||||||+.|||++-+|.++++|||.+.........
T Consensus 110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk 186 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK 186 (1187)
T ss_pred ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence 3222 245689999999999999999999999 9999999999999999999999999998765444445
Q ss_pred eeccccccCccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcC
Q 042958 966 WTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCI 1040 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1075)
...+.|||+|||||+.. ..+|+.++||||||+++.||..+.+|......+. .-..+..--.+.+..|
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR-----VllKiaKSePPTLlqP--- 258 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-----VLLKIAKSEPPTLLQP--- 258 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH-----HHHHHhhcCCCcccCc---
Confidence 66789999999999864 5689999999999999999999999986443321 1111222222333333
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..-...+.+++++|+.++|..||+++++++
T Consensus 259 -S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 259 -SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred -chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 233446999999999999999999999986
No 164
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=5.8e-32 Score=319.64 Aligned_cols=253 Identities=17% Similarity=0.242 Sum_probs=179.7
Q ss_pred HHHHHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCc------CceeeEEE
Q 042958 809 EIIRATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH------RNIVKFYG 881 (1075)
Q Consensus 809 e~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~ 881 (1075)
++....++|++.+.||+|+||.||+|.. .+++.||||+++... ....++..|+++++.++| .+++++++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 3444568899999999999999999955 468899999986421 123445667777766654 45889999
Q ss_pred EeeccccchhheecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEecCCCCCeeeCCCC------
Q 042958 882 FCSHVRHSLAMILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHN-DCFPPIVHRDISSKNVLLDFDN------ 946 (1075)
Q Consensus 882 ~~~~~~~~l~~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~------ 946 (1075)
++......++++++..+ ....+++.....|+.||+.||+|||+ . +||||||||+||+++.++
T Consensus 199 ~~~~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 199 YFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred EEEcCCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccccc
Confidence 88765444333333221 23458889999999999999999997 5 899999999999998765
Q ss_pred ----------CceEeccccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccc
Q 042958 947 ----------EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMS 1016 (1075)
Q Consensus 947 ----------~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~ 1016 (1075)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~ 352 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE 352 (467)
T ss_pred cccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 49999999886432 22345679999999999999999999999999999999999999997543221
Q ss_pred cchhhhh---------------hhhhhccCC--CCC---CC----------CcCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 042958 1017 SSSLNLN---------------IALDEMLDP--RLP---TP----------SCIVQDKLISIVEVAISCLDENPESRPTM 1066 (1075)
Q Consensus 1017 ~~~~~~~---------------~~~~~~~~~--~~~---~~----------~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 1066 (1075)
....... .....+.+. .+. .+ ..........+.+|+.+|++.||++|||+
T Consensus 353 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta 432 (467)
T PTZ00284 353 HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNA 432 (467)
T ss_pred HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCH
Confidence 0000000 000000000 000 00 00000113457899999999999999999
Q ss_pred HHHHh
Q 042958 1067 PKVSQ 1071 (1075)
Q Consensus 1067 ~evl~ 1071 (1075)
+|+++
T Consensus 433 ~e~L~ 437 (467)
T PTZ00284 433 RQMTT 437 (467)
T ss_pred HHHhc
Confidence 99986
No 165
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=8.9e-32 Score=304.53 Aligned_cols=244 Identities=20% Similarity=0.272 Sum_probs=182.0
Q ss_pred CCCCCceecccCceEEEEEEE----CCCCEEEEEEccCCCC-CchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccc
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL----ASGEIVAVKKFHSPLP-GEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 889 (1075)
+|++.+.||+|+||.||+++. .+++.||+|++..... ......+.+..|+.+++.+ +||+|+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999854 3688999999864321 1222345688999999999 599999999988765443
Q ss_pred hhheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 890 LAMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 890 l~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
+ ++++... ....+++.+...++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 81 ~-lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 H-LILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred E-EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 2 2222211 234578899999999999999999999 99999999999999999999999999998654
Q ss_pred CCCC-ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 961 PDSS-NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 961 ~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......... .....+.....+.+
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~----~~~~~~~~~~~~~~- 231 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS----EVSRRILKCDPPFP- 231 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH----HHHHHHhcCCCCCC-
Confidence 3322 23345799999999998865 47889999999999999999999996433211111 11111221111111
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
...+..+.+++.+|++.||++|| +++|+++
T Consensus 232 ---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 232 ---SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ---CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 12334689999999999999999 6777764
No 166
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=1.6e-31 Score=296.46 Aligned_cols=242 Identities=25% Similarity=0.409 Sum_probs=182.5
Q ss_pred CCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
+|++.+.||+|+||.||+|... ....||+|.+.... .....+++.+|+.+++.++||||++++++|......
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 4778899999999999999542 23578999886542 223356789999999999999999999988765443
Q ss_pred hhheecCc---------------------------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCC
Q 042958 890 LAMILSNN---------------------------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDIS 936 (1075)
Q Consensus 890 l~~~~~~~---------------------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 936 (1075)
+.++ +.. .....+++...+.++.|++.|++|||+. +++|||||
T Consensus 79 ~lv~-e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dik 154 (290)
T cd05045 79 LLIV-EYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLA 154 (290)
T ss_pred EEEE-EecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhh
Confidence 2221 111 1123478899999999999999999999 99999999
Q ss_pred CCCeeeCCCCCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccC
Q 042958 937 SKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIS 1013 (1075)
Q Consensus 937 ~~Nill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~ 1013 (1075)
|+||+++.++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999865433221 122345678999999988889999999999999999998 999986432
Q ss_pred ccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1014 SMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
... ......... +.+.+ ...+..+.+++.+||+.+|++||+++|+++.|+
T Consensus 235 ~~~-----~~~~~~~~~--~~~~~----~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~ 284 (290)
T cd05045 235 PER-----LFNLLKTGY--RMERP----ENCSEEMYNLMLTCWKQEPDKRPTFADISKELE 284 (290)
T ss_pred HHH-----HHHHHhCCC--CCCCC----CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 211 011111111 11111 223346899999999999999999999999875
No 167
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=7e-32 Score=303.70 Aligned_cols=231 Identities=22% Similarity=0.290 Sum_probs=173.7
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHH-HHhcCCcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVK-ALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|+. .+|+.||+|++.............+..|.. +++.++||||+++++++.+.+..+. +++...
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~l-v~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYF-VLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEE-EEcCCC
Confidence 4699999999999966 468999999986532222222345555554 5788999999999998876554322 222211
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+...+...++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 156 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTF 156 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccc
Confidence 134567888888999999999999999 99999999999999999999999999998643333334456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.+.......+ ......+.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~~----~~~~~~~~ 224 (321)
T cd05603 157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--------SQMYDNILHKPLQLP----GGKTVAAC 224 (321)
T ss_pred cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--------HHHHHHHhcCCCCCC----CCCCHHHH
Confidence 789999999999998999999999999999999999999964321 111222222222222 12334689
Q ss_pred HHHHHccCCCCCCCCCHH
Q 042958 1050 EVAISCLDENPESRPTMP 1067 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~ 1067 (1075)
+++.+|++.||.+||++.
T Consensus 225 ~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 225 DLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHccCCHhhcCCCC
Confidence 999999999999999764
No 168
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=4.3e-32 Score=305.88 Aligned_cols=231 Identities=23% Similarity=0.282 Sum_probs=174.9
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHH-HHhcCCcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVK-ALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|.. .+|+.||+|++............++..|.. +++.++||||+++++++...+..+.+ ++...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv-~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFV-LDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEE-EcCCC
Confidence 4699999999999955 579999999986532222223345556655 46778999999999988765543322 22211
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++.+...++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~ 156 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTF 156 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccc
Confidence 234678889999999999999999999 99999999999999999999999999997644333344456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+..+.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~ 224 (325)
T cd05604 157 CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--------EMYDNILHKPLVLRP----GASLTAW 224 (325)
T ss_pred cCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--------HHHHHHHcCCccCCC----CCCHHHH
Confidence 7999999999999999999999999999999999999999643211 111222222221111 2334588
Q ss_pred HHHHHccCCCCCCCCCHH
Q 042958 1050 EVAISCLDENPESRPTMP 1067 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~ 1067 (1075)
+++.+|+++||.+||++.
T Consensus 225 ~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 225 SILEELLEKDRQRRLGAK 242 (325)
T ss_pred HHHHHHhccCHHhcCCCC
Confidence 999999999999999885
No 169
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=1.3e-31 Score=294.95 Aligned_cols=237 Identities=24% Similarity=0.293 Sum_probs=177.4
Q ss_pred ecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc---
Q 042958 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA--- 898 (1075)
Q Consensus 823 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~--- 898 (1075)
||+|+||.||++.. .+|+.||+|++.............+..|++++++++||||+++++++......+ ++++...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~-lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLC-LVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEE-EEEecCCCCC
Confidence 69999999999965 469999999986432222222345667999999999999999999887655432 2222111
Q ss_pred --------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccc
Q 042958 899 --------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970 (1075)
Q Consensus 899 --------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 970 (1075)
....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++...... .......
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-KTITQRA 155 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-ceeeccC
Confidence 123478888899999999999999999 9999999999999999999999999999876533 2233457
Q ss_pred cccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHH
Q 042958 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050 (1075)
Q Consensus 971 gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1050 (1075)
|+..|+|||++.+..++.++||||+||++|||++|+.||........ ................ ....+.++.+
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~~ 228 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA----KEELKRRTLEDEVKFE---HQNFTEESKD 228 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh----HHHHHHHhhccccccc---cccCCHHHHH
Confidence 89999999999988899999999999999999999999864321110 1111112222222111 1123456899
Q ss_pred HHHHccCCCCCCCCCHHHHHh
Q 042958 1051 VAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1051 li~~cl~~dP~~RPs~~evl~ 1071 (1075)
++.+||++||++||+++|+++
T Consensus 229 li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred HHHHHhccCHhhCCCCccchh
Confidence 999999999999999977654
No 170
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=6.5e-32 Score=307.15 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=183.5
Q ss_pred HHHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 811 IRATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 811 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
....++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|++++++++||||+++++++......
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 34567899999999999999999954 5789999999875432 222345678999999999999999999877543211
Q ss_pred -----hhheecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccc
Q 042958 890 -----LAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957 (1075)
Q Consensus 890 -----l~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 957 (1075)
.++.+... .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 166 (343)
T cd07878 90 ENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLAR 166 (343)
T ss_pred cccCcEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccce
Confidence 11111111 1234588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh-------hhh----
Q 042958 958 FLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL-------NIA---- 1025 (1075)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~-------~~~---- 1025 (1075)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||............. ...
T Consensus 167 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07878 167 QADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKI 243 (343)
T ss_pred ecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 75432 234578999999999876 468899999999999999999999996432211000000 000
Q ss_pred ----hhhccC--CCCCCC--CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1026 ----LDEMLD--PRLPTP--SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1026 ----~~~~~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...... +..+.. ..........+.+++.+|++.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 244 SSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred chhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 000000 0000112235789999999999999999999985
No 171
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=1e-31 Score=298.04 Aligned_cols=251 Identities=24% Similarity=0.355 Sum_probs=178.2
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC---CcCceeeEEEEeeccc----
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI---RHRNIVKFYGFCSHVR---- 887 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~---- 887 (1075)
+|++.+.||+|+||.||+|.. .+|+.||+|.+....... .....+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 478889999999999999955 478999999987543222 1123455677776665 7999999999876432
Q ss_pred cchhheecCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccc
Q 042958 888 HSLAMILSNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957 (1075)
Q Consensus 888 ~~l~~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 957 (1075)
..+.++++.. .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 80 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 80 TKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred ceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccc
Confidence 1122222211 1123478999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------hhh-h--
Q 042958 958 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------IAL-D-- 1027 (1075)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------~~~-~-- 1027 (1075)
...... ......|+..|+|||++.+..++.++||||+||++|||++|+.||.............. ... .
T Consensus 157 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 157 IYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred cccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 765322 22345688999999999988999999999999999999999999864322110000000 000 0
Q ss_pred ----hccCCCCCCC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 ----EMLDPRLPTP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 ----~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+..+.+ ..........+.+++.+|+++||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000 0011123456889999999999999999999975
No 172
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.8e-31 Score=292.40 Aligned_cols=245 Identities=24% Similarity=0.334 Sum_probs=185.0
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+.++++++||||+++++++......+ +
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~-i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLW-I 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE-E
Confidence 35799999999999999999965 5789999999864321 22456889999999999999999999987654432 2
Q ss_pred eecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+++... ....+++.++..++.|+++|+.|||+. +|+|||+||+||+++.++.+||+|||++..+....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 222211 234578889999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC-Cc
Q 042958 964 SNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP-SC 1039 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1039 (1075)
.......|+..|+|||.+. ...++.++||||+|+++|||++|+.||......... ..+....+..+ ..
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~--------~~~~~~~~~~~~~~ 232 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--------FLMSKSNFQPPKLK 232 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh--------eeeecCCCCCCCCc
Confidence 3334456889999999874 345788999999999999999999998533221100 01111111111 00
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1040 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
.....+..+.+++.+||+.||++|||++++++.+
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 233 DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1112345799999999999999999999998754
No 173
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=2.4e-31 Score=289.69 Aligned_cols=241 Identities=24% Similarity=0.340 Sum_probs=187.4
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|++.+.||+|++|.||++.. .+++.||+|++...... ....+.+..|++++++++|+|++++++++...+..+.+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 478889999999999999954 46889999998654322 2335678899999999999999999988764443332222
Q ss_pred cCcc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 895 SNNA-----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 895 ~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+... ....+++.++.+++.|++.|++|||+. +++||||||+||+++.++.++|+|||++..+....
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 2111 134578999999999999999999999 99999999999999999999999999998775444
Q ss_pred CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHH
Q 042958 964 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQD 1043 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1075)
.......+++.|+|||+..+..++.++||||+|+++||+++|+.||+..... ...........+. ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~ 225 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN--------SLVYRIIEGKLPP---MPKD 225 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhcCCCC---Cccc
Confidence 4444567889999999999999999999999999999999999998632211 1111111222211 1223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1044 KLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+..+.+++.+||+.||++||++.|+++
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 226 YSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred cCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 4457999999999999999999999986
No 174
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=2.3e-31 Score=290.20 Aligned_cols=241 Identities=23% Similarity=0.412 Sum_probs=185.1
Q ss_pred cCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
++|.+.+.||+|+||.||+|....+..||+|++.... ...+.+.+|++++++++|||++++++++......+.+..
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEc
Confidence 5688889999999999999988777789999876432 124678899999999999999999998765433222211
Q ss_pred cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
... .....+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 111 1123478899999999999999999999 9999999999999999999999999999876443221
Q ss_pred -eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCCCCCcCcH
Q 042958 966 -WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLPTPSCIVQ 1042 (1075)
Q Consensus 966 -~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1042 (1075)
.....++..|+|||+..+..++.++||||||+++|||++ |+.||....... ....+... ..+. ..
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~~~~~~~~~~~----~~ 226 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--------VLEQVERGYRMPC----PQ 226 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCCCCCC----Cc
Confidence 122345678999999998889999999999999999999 899986432211 11111111 1111 12
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+..+.+++.+||++||++||++++|.+.|+
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 227 GCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 34557999999999999999999999999886
No 175
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-32 Score=301.71 Aligned_cols=235 Identities=26% Similarity=0.390 Sum_probs=183.7
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCccc
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAA 899 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~~ 899 (1075)
-++|+|.||+||-|+. .+...+|||.+..... ...+-+..|+..-++++|+|||+++|.|.+.+ ++.++++...+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds---r~~QPLhEEIaLH~~LrHkNIVrYLGs~senG-f~kIFMEqVPG 656 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS---REVQPLHEEIALHSTLRHKNIVRYLGSVSENG-FFKIFMEQVPG 656 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc---hhhccHHHHHHHHHHHhhHhHHHHhhccCCCC-eEEEEeecCCC
Confidence 3699999999999954 5667899999865322 22456889999999999999999999987755 44444443332
Q ss_pred c----------CCC--CHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeC-CCCCceEeccccccccCCCCCce
Q 042958 900 A----------KDL--GWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLD-FDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 900 ~----------~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
+ +++ .+...-.+.+||++||.|||+. .|||||||.+||+++ ..|.+||+|||-++.+..-....
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~T 733 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCT 733 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccc
Confidence 2 233 4556667889999999999999 999999999999996 57899999999999887666667
Q ss_pred eccccccCccCccccccC--CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 967 TELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
.+..||..|||||++..+ .|..++|||||||++.||.||++||.........-. .-.+.... +..+.+.
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF-----kVGmyKvH----P~iPeel 804 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF-----KVGMYKVH----PPIPEEL 804 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh-----hhcceecC----CCCcHHH
Confidence 778999999999999754 588999999999999999999999975443221110 01111111 2245677
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+.+...+|.+|+.+||.+||++.++++
T Consensus 805 saeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 788999999999999999999999875
No 176
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=2e-31 Score=289.27 Aligned_cols=237 Identities=24% Similarity=0.405 Sum_probs=179.7
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc--
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN-- 897 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~-- 897 (1075)
+.||+|+||.||+|.. .+++.||+|.+.... ..+....+.+|++++++++||||++++++|......+.+ ++..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv-~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV-MELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEE-EeeccC
Confidence 3699999999999965 479999999876432 233457799999999999999999999998765543222 2211
Q ss_pred --------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce--e
Q 042958 898 --------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW--T 967 (1075)
Q Consensus 898 --------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~--~ 967 (1075)
.....+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++.......... .
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 1133578999999999999999999999 99999999999999999999999999997654321111 1
Q ss_pred ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
....+..|+|||.+.+..++.++||||+|+++|||++ |..||....... ........ ...+. ....+.
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-----~~~~~~~~--~~~~~----~~~~~~ 223 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-----TREAIEQG--VRLPC----PELCPD 223 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-----HHHHHHcC--CCCCC----cccCCH
Confidence 1123467999999998889999999999999999998 888886332211 11111111 11111 122345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1047 SIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+.+++.+|++++|++|||+.||.++|+
T Consensus 224 ~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 224 AVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 6899999999999999999999999986
No 177
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=1e-31 Score=304.97 Aligned_cols=246 Identities=24% Similarity=0.395 Sum_probs=183.7
Q ss_pred hcCCCCCceecccCceEEEEEEE------CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeecc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL------ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHV 886 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 886 (1075)
.++|++.+.||+|+||.||+|.. .+++.||||+++.... ....+.+.+|+.++.++ +||||++++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 46799999999999999999953 3578999999875432 22346788999999999 789999999988655
Q ss_pred ccchhheecCcc--------------------------------------------------------------------
Q 042958 887 RHSLAMILSNNA-------------------------------------------------------------------- 898 (1075)
Q Consensus 887 ~~~l~~~~~~~~-------------------------------------------------------------------- 898 (1075)
+..+.+++++..
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 443322221110
Q ss_pred --------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc--eec
Q 042958 899 --------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTE 968 (1075)
Q Consensus 899 --------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~--~~~ 968 (1075)
....+++.++.+++.|+++|++|||+. +|+||||||+||+++.++.+|++|||++......... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 012367888899999999999999999 9999999999999999999999999999875433221 122
Q ss_pred cccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHH
Q 042958 969 LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047 (1075)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1075)
..++..|+|||.+.+..++.++||||||+++|||++ |..||........ ........ ...+.+.. ...+
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----~~~~~~~~--~~~~~~~~----~~~~ 310 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEG--TRMRAPDY----TTPE 310 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH----HHHHHhcc--CCCCCCCC----CCHH
Confidence 345678999999988889999999999999999997 9999864322110 00111111 11111111 2235
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1048 IVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1048 l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+.+++..||+.||++|||+.||++.|+
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~ 337 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLG 337 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 899999999999999999999999875
No 178
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=2.8e-31 Score=292.01 Aligned_cols=243 Identities=25% Similarity=0.377 Sum_probs=183.7
Q ss_pred CCCCceecccCceEEEEEEEC----CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc----
Q 042958 817 FDDEHCIGKGGQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH---- 888 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 888 (1075)
|++.+.||+|+||.||+|... .+..||+|+++..... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 567889999999999999654 2478999998754322 2335678999999999999999999998865443
Q ss_pred -chhheecCc---------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEec
Q 042958 889 -SLAMILSNN---------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSD 952 (1075)
Q Consensus 889 -~l~~~~~~~---------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 952 (1075)
...+++++. .....+++.....++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 111111111 1123578899999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhc
Q 042958 953 FGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEM 1029 (1075)
Q Consensus 953 fGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1029 (1075)
||.++.+...... .....++..|+|||++.+..++.++||||||+++|||++ |..||....... ..+..
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--------~~~~~ 228 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--------IYDYL 228 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHH
Confidence 9999876543322 112235678999999988889999999999999999999 889986433211 11122
Q ss_pred cCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1030 LDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
....... .....+..+.+++.+||+.||++|||+.||++.|+
T Consensus 229 ~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~ 270 (273)
T cd05035 229 RHGNRLK---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLE 270 (273)
T ss_pred HcCCCCC---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2111111 11233456999999999999999999999999874
No 179
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=1.4e-31 Score=291.09 Aligned_cols=241 Identities=21% Similarity=0.292 Sum_probs=186.7
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|++.+.||+|+||.||++.. .+++.||+|.++.... ....+.+..|+.+++.++||||+++++++......+..+.
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 477889999999999999955 4789999999865422 2235678899999999999999999999876654432221
Q ss_pred cCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 SNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 ~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
... .....+++...+.++.|+++|+.|||+. +|+|+||||+||+++.++.++++|||.+........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 111 1233578888999999999999999999 999999999999999999999999999987654433
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......|++.|+|||++.+..++.++||||||+++|+|++|+.||+..... ............. .....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~---~~~~~ 224 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK--------NLILKVCQGSYKP---LPSHY 224 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH--------HHHHHHhcCCCCC---CCccc
Confidence 334567889999999999888999999999999999999999999742211 1111111111111 11223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
+..+.+++.+||+.||++||++.|++..
T Consensus 225 ~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 225 SYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 4468899999999999999999999875
No 180
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=1.9e-31 Score=296.08 Aligned_cols=242 Identities=24% Similarity=0.440 Sum_probs=185.1
Q ss_pred cCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
.+|...+.||+|+||.||+|... ++..||+|.+... .....+.+.+|++++++++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 45777899999999999999542 3567999998643 22334678999999999999999999999876554
Q ss_pred chhheecCcc-------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeC
Q 042958 889 SLAMILSNNA-------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLD 943 (1075)
Q Consensus 889 ~l~~~~~~~~-------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 943 (1075)
.+.++ +... ....+++..+++++.|++.|++|||++ +|+||||||+||+++
T Consensus 82 ~~lv~-e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~ 157 (291)
T cd05094 82 LIMVF-EYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVG 157 (291)
T ss_pred eEEEE-ecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc
Confidence 32221 1110 123478999999999999999999999 999999999999999
Q ss_pred CCCCceEeccccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchh
Q 042958 944 FDNEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSL 1020 (1075)
Q Consensus 944 ~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~ 1020 (1075)
.++.++|+|||+++....... ......++..|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----- 232 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT----- 232 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----
Confidence 999999999999986544321 1223456788999999999999999999999999999998 99998643221
Q ss_pred hhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1021 NLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1021 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+.+.....+.. ....+..+.+++.+||++||++||+++||+++|+
T Consensus 233 ---~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 233 ---EVIECITQGRVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred ---HHHHHHhCCCCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 11122222222111 1123456899999999999999999999999874
No 181
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=6.5e-32 Score=304.41 Aligned_cols=232 Identities=22% Similarity=0.245 Sum_probs=172.9
Q ss_pred ceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHH-HHHhcCCcCceeeEEEEeeccccchhheecCcc
Q 042958 821 HCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEV-KALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
+.||+|+||.||+|... +++.||+|++.............+..|. .+++.++||||+++++++...+..+. +++...
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~l-v~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF-VLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEE-EEeCCC
Confidence 46999999999999654 6789999998643211122223444444 45678899999999998876554322 222221
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+...+...++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~ 156 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTF 156 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccc
Confidence 123467778888999999999999999 99999999999999999999999999998654433444556
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+ ...+..+.
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~~~~~----~~~~~~~~ 224 (325)
T cd05602 157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILNKPLQLK----PNITNSAR 224 (325)
T ss_pred cCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--------HHHHHHHhCCcCCC----CCCCHHHH
Confidence 7999999999999999999999999999999999999999643221 11112222222111 12334689
Q ss_pred HHHHHccCCCCCCCCCHHH
Q 042958 1050 EVAISCLDENPESRPTMPK 1068 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~e 1068 (1075)
+++.+|+++||.+||++.+
T Consensus 225 ~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 225 HLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred HHHHHHcccCHHHCCCCCC
Confidence 9999999999999998874
No 182
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=2.1e-31 Score=289.95 Aligned_cols=239 Identities=27% Similarity=0.417 Sum_probs=187.8
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|... +++.||+|.+.... ..+++.+|++++++++||||+++++++......+..
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~- 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV- 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE-
Confidence 67889999999999999999766 48899999986431 157899999999999999999999998776443222
Q ss_pred ecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 LSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 ~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++... ....+++...+.++.|+++|+.|||+. +++||||+|+||+++.++.+||+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 22111 245679999999999999999999999 99999999999999999999999999998766544
Q ss_pred CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHH
Q 042958 964 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQD 1043 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1075)
.......++..|+|||++.+..++.++||||||+++|||++|+.||......... ............ ....
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~----~~~~ 224 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI-----FMIPNKPPPTLS----DPEK 224 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh-----hhhccCCCCCCC----chhh
Confidence 3334456889999999999889999999999999999999999998743221100 000000011111 1223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1044 KLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+.+++.+||+.||++|||+.||++
T Consensus 225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 225 WSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred cCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 3456899999999999999999999986
No 183
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=1.5e-31 Score=295.74 Aligned_cols=243 Identities=21% Similarity=0.264 Sum_probs=182.5
Q ss_pred CCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee-
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL- 894 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~- 894 (1075)
|+..+.||+|+||+||+|.. .+++.||+|.+.............+.+|+++++.++|+||+++.+++...+..+..+.
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66778999999999999955 5789999999865433333334567889999999999999999988876554322221
Q ss_pred cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
... .....+++.....++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~ 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG-ES 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCC-Cc
Confidence 111 1123588999999999999999999999 9999999999999999999999999999765432 22
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
.....|+..|+|||++.+..++.++|+||+|+++|||++|+.||........ .............. ......
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~ 229 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK----REEVDRRVLETEEV----YSAKFS 229 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhhhccccc----cCccCC
Confidence 2345789999999999988999999999999999999999999964322110 01111111111111 112234
Q ss_pred HHHHHHHHHccCCCCCCCCC-----HHHHHh
Q 042958 1046 ISIVEVAISCLDENPESRPT-----MPKVSQ 1071 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs-----~~evl~ 1071 (1075)
..+.+++..|++.||++||+ ++|+++
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 230 EEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 46889999999999999999 666654
No 184
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=1.3e-31 Score=301.35 Aligned_cols=235 Identities=21% Similarity=0.290 Sum_probs=179.4
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccchhhe
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~l~~~ 893 (1075)
+|+..+.||+|+||.||+|.. .+|+.||+|++...........+.+..|..+++.+. |++|+++++++...+.. .++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~-~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRL-YFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEE-EEE
Confidence 477789999999999999965 478999999987532222233456788999988885 57788888887665433 222
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCCc
Confidence 22221 224688999999999999999999999 999999999999999999999999999986544333
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+. ..
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~~~~~p~----~~ 224 (323)
T cd05615 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--------DELFQSIMEHNVSYPK----SL 224 (323)
T ss_pred cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCc----cC
Confidence 34456799999999999998999999999999999999999999974322 1112222222222221 23
Q ss_pred HHHHHHHHHHccCCCCCCCCCH
Q 042958 1045 LISIVEVAISCLDENPESRPTM 1066 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~ 1066 (1075)
+.++.+++.+|+++||.+|++.
T Consensus 225 ~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 225 SKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CHHHHHHHHHHcccCHhhCCCC
Confidence 3468899999999999999985
No 185
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=2e-31 Score=299.97 Aligned_cols=184 Identities=20% Similarity=0.345 Sum_probs=145.5
Q ss_pred CceecccCceEEEEEEEC---CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-chhheec
Q 042958 820 EHCIGKGGQGSVYKAELA---SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-SLAMILS 895 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~l~~~~~ 895 (1075)
..+||+|+||.||+|+.. ++..||+|.+..... ...+.+|++++++++||||+++++++..... .+.++++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 357999999999999764 457899999864321 2467789999999999999999998854322 2212111
Q ss_pred Cc-----------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeee----CCCCCceEeccc
Q 042958 896 NN-----------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLL----DFDNEAHVSDFG 954 (1075)
Q Consensus 896 ~~-----------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~DfG 954 (1075)
.. .....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 81 YAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 11 1123478888999999999999999999 99999999999999 566789999999
Q ss_pred cccccCCCCC---ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCc
Q 042958 955 IAKFLKPDSS---NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDF 1011 (1075)
Q Consensus 955 la~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~ 1011 (1075)
+++....... ......||+.|+|||++.+. .++.++||||+||++|||+||+.||..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 9987654322 22345689999999998764 578999999999999999999999864
No 186
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=3.4e-31 Score=294.44 Aligned_cols=243 Identities=23% Similarity=0.353 Sum_probs=187.2
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
..+|+..+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++......+.+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 35788889999999999999964 57899999998654322 246788999999999999999999988765443222
Q ss_pred eecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 893 ILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 893 ~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 96 -~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 96 -MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred -ecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 21111 123478889999999999999999999 999999999999999999999999999887654433
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......+++.|+|||.+.+..++.++|||||||++|||++|+.||........ ........... .......
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~~--~~~~~~~ 242 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-------LYLIATNGTPE--LQNPEKL 242 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-------HHHHhcCCCCC--CCCcccc
Confidence 33445788999999999988899999999999999999999999964332110 00111111110 0112234
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...+.+++.+||.+||++||++.|+++.
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 243 SAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 4568999999999999999999999863
No 187
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=7.8e-32 Score=310.89 Aligned_cols=241 Identities=20% Similarity=0.258 Sum_probs=178.4
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.|+..+.||+|+||.||+|.. .+++.||+|++...........+.+.+|++++++++||||+++++++.+....+ +++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~-lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY-FVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEE-EEE
Confidence 578889999999999999955 578999999986533223344567899999999999999999999988755432 222
Q ss_pred cCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC--
Q 042958 895 SNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS-- 963 (1075)
Q Consensus 895 ~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~-- 963 (1075)
+... ....+++.....++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 2211 124567888888999999999999999 99999999999999999999999999975331100
Q ss_pred ---------------------------------------------CceeccccccCccCccccccCCCCcccchHhHHHH
Q 042958 964 ---------------------------------------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVL 998 (1075)
Q Consensus 964 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~v 998 (1075)
......+||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 00112468999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccCccccchhhhhhhhhhccC--CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCC---HHHHHh
Q 042958 999 ALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD--PRLPTPSCIVQDKLISIVEVAISCLDENPESRPT---MPKVSQ 1071 (1075)
Q Consensus 999 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1071 (1075)
+|||++|+.||....... ....+.. .....+. ....+.+..+++.+++ .+|++|++ ++|+++
T Consensus 238 l~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLE--------TQMKVINWQTSLHIPP--QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHhCCCCCCCCCHHH--------HHHHHHccCCCcCCCC--cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999997432211 1111111 1111111 1122345777777765 59999997 887764
No 188
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=1.5e-31 Score=296.20 Aligned_cols=251 Identities=20% Similarity=0.232 Sum_probs=183.4
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|++.+.||+|++|.||+|... +++.||+|++...... ....+.+.+|+.++++++||||+++++++......+..+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 4788899999999999999664 7999999998654322 2234678899999999999999999999876554322221
Q ss_pred cC----------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 SN----------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 ~~----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.. ......+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 80 FLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred cCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 11 11225688999999999999999999999 999999999999999999999999999986654433
Q ss_pred ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh----------------hhhhh
Q 042958 965 NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL----------------NIALD 1027 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~----------------~~~~~ 1027 (1075)
......+++.|+|||++.+. .++.++||||+|+++|||++|+.||............. .....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 33445678999999987654 47889999999999999999999987432211000000 00000
Q ss_pred hccCCCCCCC--CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 EMLDPRLPTP--SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 ~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.... ..... .......+.++.+++.+||+.||++|||+.||++
T Consensus 237 ~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 237 NTFP-KWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhcc-ccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 00000 0001123456789999999999999999999985
No 189
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=2.2e-31 Score=293.75 Aligned_cols=242 Identities=25% Similarity=0.424 Sum_probs=184.1
Q ss_pred hcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
..+|+..++||+|+||.||+|... ++..||+|.+... .....+.+.+|+++++.++|+||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 356788899999999999999532 4668999987643 2334568999999999999999999999887654
Q ss_pred cchhheecCcc------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeC
Q 042958 888 HSLAMILSNNA------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLD 943 (1075)
Q Consensus 888 ~~l~~~~~~~~------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 943 (1075)
..+.. ++... ....+++.+++.++.|++.|++|||+. +++||||||+||+++
T Consensus 81 ~~~lv-~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 81 PLLMV-FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred ceEEE-EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 43222 11110 013478999999999999999999999 999999999999999
Q ss_pred CCCCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchh
Q 042958 944 FDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSL 1020 (1075)
Q Consensus 944 ~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~ 1020 (1075)
+++.+||+|||+++.+...... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---- 232 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE---- 232 (280)
T ss_pred CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH----
Confidence 9999999999999765432211 122335678999999999999999999999999999998 899985322211
Q ss_pred hhhhhhhhccCCC-CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1021 NLNIALDEMLDPR-LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1021 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
......... ...+ ...+..+.+++.+||+.||.+||+++||.+.|+
T Consensus 233 ----~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 233 ----AIECITQGRELERP----RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ----HHHHHHcCccCCCC----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111111111 1111 123446899999999999999999999999886
No 190
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=2.9e-31 Score=290.10 Aligned_cols=244 Identities=23% Similarity=0.315 Sum_probs=185.8
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCc--hhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGE--MTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
++|+..+.||+|++|.||+|.. .++++||+|.+....... ....+.+.+|++++++++||||+++++++......+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~- 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLS- 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEE-
Confidence 5688999999999999999954 578999999986543221 223457889999999999999999999987765332
Q ss_pred heecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 892 MILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 892 ~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
.+++... ....+++....+++.|++.|+.|||+. +++||||+|+||++++++.++|+|||+++.....
T Consensus 81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 2222111 134567888899999999999999999 9999999999999999999999999999765432
Q ss_pred CCc---eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCc
Q 042958 963 SSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSC 1039 (1075)
Q Consensus 963 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1075)
... .....++..|+|||++.+..++.++||||+|+++||+++|+.||....... ........... ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~~--~~ 227 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA--------AIFKIATQPTN--PQ 227 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH--------HHHHHhccCCC--CC
Confidence 211 123467889999999999889999999999999999999999986432211 01111111110 01
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1040 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
........+.+++.+||..+|++|||+.|+++.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 122334468999999999999999999999874
No 191
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=4.1e-31 Score=292.02 Aligned_cols=240 Identities=24% Similarity=0.365 Sum_probs=182.1
Q ss_pred CCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
|++.+.||+|+||.||+|... ++..+|+|.+... .....+.+.+|+++++.++||||+++++++......+..+..
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 566788999999999999654 5788999988543 233456788999999999999999999988765543222211
Q ss_pred Cc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 896 NN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 896 ~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
.. .....+++..+..++.|+++||+|||+. +++||||||+||+++.++.+|++|||++..........
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~ 160 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 160 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccccc
Confidence 10 1134588999999999999999999999 99999999999999999999999999997654433333
Q ss_pred eccccccCccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 967 TELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
....++..|+|||++. +..++.++||||+||++|||++|+.||....... ..........+....+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~---- 231 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-----VLLKIAKSEPPTLAQP---- 231 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-----HHHHHhhcCCCCCCCc----
Confidence 4457899999999874 4457789999999999999999999986433211 0001111111111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+..+.+++.+||+.||.+||+++++++
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 232 SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 223456999999999999999999999986
No 192
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=4.1e-31 Score=294.16 Aligned_cols=250 Identities=20% Similarity=0.324 Sum_probs=183.1
Q ss_pred hcCCCCCceecccCceEEEEEEEC-----------------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCce
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-----------------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 876 (1075)
.++|++.+.||+|+||.||++... ++..||+|++.... ......++.+|+++++.++|+||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 356899999999999999998532 23469999987542 23345789999999999999999
Q ss_pred eeEEEEeeccccchhheecCc--------------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCC
Q 042958 877 VKFYGFCSHVRHSLAMILSNN--------------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDIS 936 (1075)
Q Consensus 877 v~l~~~~~~~~~~l~~~~~~~--------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 936 (1075)
+++++++...+..+.+ ++.. .....+++.+..+++.|++.|++|||+. +++|||||
T Consensus 82 ~~~~~~~~~~~~~~lv-~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlk 157 (296)
T cd05095 82 IRLLAVCITSDPLCMI-TEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLA 157 (296)
T ss_pred ceEEEEEecCCccEEE-EEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCC
Confidence 9999998765443222 1111 0112467888999999999999999999 99999999
Q ss_pred CCCeeeCCCCCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh--CCCCCCcc
Q 042958 937 SKNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFI 1012 (1075)
Q Consensus 937 ~~Nill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g~~p~~~~ 1012 (1075)
|+||+++.++.++++|||+++.+...... .....+++.|+|||+..+..++.++||||||+++|||++ |..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 99999999999999999999866443221 122334678999999888889999999999999999998 77887643
Q ss_pred Cccccchhhhhhhhhhc-cCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1013 SSMSSSSLNLNIALDEM-LDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
......... ....... .....+.+ ..++..+.+++.+||+.||++||++.||.+.|+
T Consensus 238 ~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 238 SDEQVIENT-GEFFRDQGRQVYLPKP----ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ChHHHHHHH-HHHHhhccccccCCCC----CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 221111100 0000000 01111111 123356999999999999999999999999885
No 193
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=2e-31 Score=295.87 Aligned_cols=253 Identities=20% Similarity=0.232 Sum_probs=176.8
Q ss_pred hcCCCCCceecccCceEEEEEEECC----CCEEEEEEccCCCCCchhH--------HHHHHHHHHHHhcCCcCceeeEEE
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELAS----GEIVAVKKFHSPLPGEMTF--------QQEFLNEVKALTEIRHRNIVKFYG 881 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~ 881 (1075)
..+|.+.+.||+|+||.||+|...+ +..+|+|+........... ......+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999997653 4566777643321110000 011233445566779999999998
Q ss_pred Eeeccccch---hheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceE
Q 042958 882 FCSHVRHSL---AMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHV 950 (1075)
Q Consensus 882 ~~~~~~~~l---~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 950 (1075)
++....... .+.+... ......++.....++.|+++|++|||+. +|+||||||+||+++.++.++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEE
Confidence 765433211 1111110 1112356777889999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCC-------ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCcccc-chhhh
Q 042958 951 SDFGIAKFLKPDSS-------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSS-SSLNL 1022 (1075)
Q Consensus 951 ~DfGla~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~-~~~~~ 1022 (1075)
+|||+|+.+..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .....
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 99999987643221 11234699999999999999999999999999999999999999975532111 11011
Q ss_pred hhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1023 NIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
......+..++...+ ..+..+.+++..||..+|++||+++++++.++
T Consensus 248 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 248 CDFIKRLHEGKIKIK-----NANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHHhhhhhhccC-----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111122222222211 22456999999999999999999999999874
No 194
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=4e-31 Score=291.40 Aligned_cols=243 Identities=24% Similarity=0.363 Sum_probs=186.0
Q ss_pred hcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
.++|++.+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 467888999999999999999653 24689999986432 2233567889999999999999999999987654
Q ss_pred cchhheecCcc-------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCc
Q 042958 888 HSLAMILSNNA-------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA 948 (1075)
Q Consensus 888 ~~l~~~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 948 (1075)
..+.+ ++... ....++|.+++.++.|++.|+.|||+. +|+||||||+||+++.++.+
T Consensus 83 ~~~~v-~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 83 PTLVV-MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred CcEEE-EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCE
Confidence 43222 22111 122467889999999999999999999 99999999999999999999
Q ss_pred eEeccccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhh
Q 042958 949 HVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIA 1025 (1075)
Q Consensus 949 kl~DfGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 1025 (1075)
||+|||+++.+..... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||....... .
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--------~ 230 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--------V 230 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--------H
Confidence 9999999986544321 1223456789999999988889999999999999999998 999986332211 1
Q ss_pred hhhccCCC-CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1026 LDEMLDPR-LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1026 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
........ ...+. ..+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 231 ~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 231 LKFVIDGGHLDLPE----NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHhcCCCCCCCC----CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11111211 11111 22456999999999999999999999999885
No 195
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=4e-31 Score=287.85 Aligned_cols=238 Identities=26% Similarity=0.417 Sum_probs=180.0
Q ss_pred ceecccCceEEEEEEEC-C---CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecC
Q 042958 821 HCIGKGGQGSVYKAELA-S---GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSN 896 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~ 896 (1075)
++||+|+||.||+|... . +..||+|.+...... ...+++..|+++++.+.||||+++++++......+.+....
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCC
Confidence 46999999999999543 2 368999998754322 34578999999999999999999999886544332222211
Q ss_pred cc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceec-
Q 042958 897 NA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE- 968 (1075)
Q Consensus 897 ~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~- 968 (1075)
.. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++...........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 79 LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 11 223578999999999999999999999 9999999999999999999999999999876544332211
Q ss_pred --cccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 969 --LAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 969 --~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
..++..|+|||...+..++.++||||||+++|||++ |+.||........ ....... ...+. ....+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~-----~~~~~~~--~~~~~----~~~~~ 224 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEV-----IAMLESG--ERLPR----PEECP 224 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHH-----HHHHHcC--CcCCC----CCCCC
Confidence 123467999999998899999999999999999998 9999874332111 1111111 11111 12234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+.+++.+||..+|++||++.||++.|+
T Consensus 225 ~~l~~li~~cl~~~p~~Rp~~~~l~~~l~ 253 (257)
T cd05060 225 QEIYSIMLSCWKYRPEDRPTFSELESTFR 253 (257)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 56899999999999999999999999875
No 196
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=9.8e-32 Score=307.47 Aligned_cols=251 Identities=18% Similarity=0.237 Sum_probs=185.9
Q ss_pred HHHHHHhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecc
Q 042958 808 EEIIRATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHV 886 (1075)
Q Consensus 808 ~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 886 (1075)
.++....++|++.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++...
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344555689999999999999999999664 6889999998643222223345688999999999999999999988765
Q ss_pred ccchhheecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 887 RHSLAMILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 887 ~~~l~~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
... .++++... ....++...+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 116 ~~~-~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 116 RYL-YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred CEE-EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 443 22222211 123467788888999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-ceeccccccCccCccccccCC----CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCC-
Q 042958 959 LKPDSS-NWTELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDP- 1032 (1075)
Q Consensus 959 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 1032 (1075)
...... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .....+...
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~~~ 263 (371)
T cd05622 192 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMNHK 263 (371)
T ss_pred cCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCC
Confidence 654322 223567999999999987543 788999999999999999999999743221 111222211
Q ss_pred -CCCCCCcCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHhh
Q 042958 1033 -RLPTPSCIVQDKLISIVEVAISCLDENPES--RPTMPKVSQL 1072 (1075)
Q Consensus 1033 -~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 1072 (1075)
.+..+ .....+..+.+++.+|+..++.+ ||+++|+++.
T Consensus 264 ~~~~~~--~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 264 NSLTFP--DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CcccCC--CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11111 11234456889999999844433 7899998764
No 197
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=3.8e-31 Score=294.23 Aligned_cols=250 Identities=20% Similarity=0.325 Sum_probs=182.3
Q ss_pred hcCCCCCceecccCceEEEEEEECC---------------CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceee
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELAS---------------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVK 878 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 878 (1075)
..+|++.+.||+|+||.||++.... ...||+|++.... .......|.+|++++++++|||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 3578899999999999999985432 2358999987542 2334567999999999999999999
Q ss_pred EEEEeeccccchhheecCcc---------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCC
Q 042958 879 FYGFCSHVRHSLAMILSNNA---------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISS 937 (1075)
Q Consensus 879 l~~~~~~~~~~l~~~~~~~~---------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 937 (1075)
+++++......+ ++++... ....+++.++++++.|+++|++|||+. +++||||||
T Consensus 82 ~~~~~~~~~~~~-lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp 157 (295)
T cd05097 82 LLGVCVSDDPLC-MITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLAT 157 (295)
T ss_pred EEEEEcCCCccE-EEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccCh
Confidence 999987654432 2222111 012368889999999999999999999 999999999
Q ss_pred CCeeeCCCCCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh--CCCCCCccC
Q 042958 938 KNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFIS 1013 (1075)
Q Consensus 938 ~Nill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g~~p~~~~~ 1013 (1075)
+||+++.++.+||+|||++......... .....++..|+|||+..+..++.++||||||+++|||++ |..||....
T Consensus 158 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 158 RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred hhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 9999999999999999999865433211 122345678999999988889999999999999999998 566775432
Q ss_pred ccccchhhhhhhhhhccCC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1014 SMSSSSLNLNIALDEMLDP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...... ...+.... ............+..+.+++.+||+.||++||++++|++.|+
T Consensus 238 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 238 DEQVIE-----NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred hHHHHH-----HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 211100 00000000 000000011123346999999999999999999999999885
No 198
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=3e-32 Score=297.33 Aligned_cols=246 Identities=30% Similarity=0.451 Sum_probs=185.0
Q ss_pred CCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
|+..+.||+|+||+||++... +++.||+|++........ .......|+.++++++||||+++++++......+.++-.
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccccccccccccccccccccccccccc
Confidence 556789999999999999665 567899999986532222 223445699999999999999999999875544322211
Q ss_pred -Cc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee
Q 042958 896 -NN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT 967 (1075)
Q Consensus 896 -~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 967 (1075)
.. .....+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||.+..+........
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~ 156 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFN 156 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBS
T ss_pred cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 11 1246688999999999999999999999 999999999999999999999999999987543444555
Q ss_pred ccccccCccCccccc-cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 968 ELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
...++..|+|||++. +..++.++||||+|+++|+|++|+.||........ ........................
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 231 (260)
T PF00069_consen 157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ-----LEIIEKILKRPLPSSSQQSREKSE 231 (260)
T ss_dssp SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH-----HHHHHHHHHTHHHHHTTSHTTSHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhh-----hhhhhhcccccccccccccchhHH
Confidence 677899999999998 88899999999999999999999999975411111 111111111000000000111125
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1047 SIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+.+++.+|++.||++||++.|+++
T Consensus 232 ~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 232 ELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 7999999999999999999999986
No 199
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.2e-32 Score=287.29 Aligned_cols=239 Identities=23% Similarity=0.367 Sum_probs=192.7
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.-|...+.||+|.|..|-.|++ -+|+.||||++.+....+.. ..++.+|++.|+-++|||||++|++.......+ .+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~s-t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKly-Li 95 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLS-TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLY-LI 95 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhh-hhHHHHHHHHHHHhcCcCeeeeeehhcccceEE-EE
Confidence 4577778899999999999954 48999999999876654433 567889999999999999999999875544322 22
Q ss_pred ecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeC-CCCCceEeccccccccCCC
Q 042958 894 LSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLD-FDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 894 ~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~DfGla~~~~~~ 962 (1075)
++-.. ....+.+.-..+++.||+.|+.|.|+. .||||||||+||.+- .-|-+|+.|||++-.+.+.
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 22111 233467788899999999999999999 899999999998764 5678999999999887754
Q ss_pred CCceeccccccCccCccccccCCCC-cccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
....+.+|+..|-|||.+.+..|+ +++||||+||++|-+++|+.||+...+ .+.+-.++|=++..|
T Consensus 173 -~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND--------SETLTmImDCKYtvP---- 239 (864)
T KOG4717|consen 173 -KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND--------SETLTMIMDCKYTVP---- 239 (864)
T ss_pred -chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc--------hhhhhhhhcccccCc----
Confidence 455678999999999999998887 688999999999999999999974332 334455556555543
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+.++.++|..|+..||++|.+.+||+.
T Consensus 240 shvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 240 SHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 455667999999999999999999999874
No 200
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=5.5e-32 Score=311.61 Aligned_cols=243 Identities=20% Similarity=0.237 Sum_probs=179.2
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|++.+.||+|+||.||+|+. .+++.||||++...........+.+.+|++++++++||||+++++++.+.+..+ +++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~-lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLY-FVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEE-EEE
Confidence 688899999999999999954 468999999986432222233467889999999999999999999987755432 222
Q ss_pred cCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC--
Q 042958 895 SNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS-- 963 (1075)
Q Consensus 895 ~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~-- 963 (1075)
+... ....++......++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 2221 134467788888999999999999999 99999999999999999999999999975331000
Q ss_pred -----------------------------------------CceeccccccCccCccccccCCCCcccchHhHHHHHHHH
Q 042958 964 -----------------------------------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 1002 (1075)
Q Consensus 964 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el 1002 (1075)
.......||+.|+|||++.+..++.++||||+||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 001134699999999999999999999999999999999
Q ss_pred HhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCC---CHHHHHh
Q 042958 1003 IKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRP---TMPKVSQ 1071 (1075)
Q Consensus 1003 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~ 1071 (1075)
++|+.||......... ...... ......+ .....+..+.+++.+|+ .+|.+|+ ++.|+++
T Consensus 238 l~G~~Pf~~~~~~~~~-----~~i~~~-~~~~~~~--~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 238 LVGQPPFLADTPAETQ-----LKVINW-ETTLHIP--SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hhCCCCCCCCCHHHHH-----HHHhcc-CccccCC--CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999743321110 001100 0111111 11123345778888876 5999999 8898875
No 201
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=6.2e-31 Score=285.12 Aligned_cols=237 Identities=24% Similarity=0.387 Sum_probs=181.3
Q ss_pred ceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc---
Q 042958 821 HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN--- 897 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~--- 897 (1075)
++||+|+||.||+|...++..||+|++.... .......+.+|++++++++||||+++++++......+. +++..
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l-v~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYI-VMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEE-EEECCCCC
Confidence 3689999999999988889999999987543 22334578899999999999999999999876554322 22211
Q ss_pred -------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce-ecc
Q 042958 898 -------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW-TEL 969 (1075)
Q Consensus 898 -------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~~~ 969 (1075)
.....+++..++.++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++.......... ...
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 1133578999999999999999999999 99999999999999999999999999997644322111 122
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1048 (1075)
.++..|+|||+..+..++.++||||||+++||+++ |..||....... ......... +... ....+..+
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-----~~~~~~~~~--~~~~----~~~~~~~~ 223 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-----AREQVEKGY--RMSC----PQKCPDDV 223 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-----HHHHHHcCC--CCCC----CCCCCHHH
Confidence 34578999999998889999999999999999998 999986432211 111111111 1111 11234569
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1049 VEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1049 ~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+++.+|++.+|++||++.|+++.|+
T Consensus 224 ~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 224 YKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHcccCcccCCCHHHHHHHhc
Confidence 99999999999999999999999875
No 202
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=3.3e-31 Score=293.21 Aligned_cols=252 Identities=24% Similarity=0.389 Sum_probs=183.5
Q ss_pred cCCCCCceecccCceEEEEEEE-----CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH- 888 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 888 (1075)
..|++.+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|++++++++||||+++++++...+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 4688889999999999999964 35889999998643 23345688999999999999999999998754332
Q ss_pred chhheecCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 889 SLAMILSNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 889 ~l~~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
.+.++++.. .....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccc
Confidence 222222211 1123578999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCce---eccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccch-------hhhhhhhhh
Q 042958 959 LKPDSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSS-------LNLNIALDE 1028 (1075)
Q Consensus 959 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~-------~~~~~~~~~ 1028 (1075)
........ ....++..|+|||+..+..++.++||||||+++|||++|..|+.......... ........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 65433221 11223456999999998889999999999999999999887754221110000 000000111
Q ss_pred ccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
........+ .....+..+.+++.+||+.+|++||||+||++.|+
T Consensus 238 ~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05081 238 LLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281 (284)
T ss_pred HHhcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 111111100 11223456999999999999999999999999886
No 203
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.6e-31 Score=306.81 Aligned_cols=247 Identities=21% Similarity=0.252 Sum_probs=182.2
Q ss_pred hcCCCCCceecccCceEEEEEEEC---CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccch
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA---SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l 890 (1075)
..+|.+.+.||+|+||.||++... +++.||+|.+... ..+.+|++++++++||||+++++++......+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 457999999999999999999543 4678999987542 23468999999999999999999887654332
Q ss_pred hheecC-------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 891 AMILSN-------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 891 ~~~~~~-------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
.++... ......+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 163 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 163 MVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred EEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 221110 12345689999999999999999999999 99999999999999999999999999998665432
Q ss_pred Cc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh--------------------
Q 042958 964 SN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN-------------------- 1021 (1075)
Q Consensus 964 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~-------------------- 1021 (1075)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||............
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 21 23457999999999999999999999999999999999999998643321100000
Q ss_pred -hhhhhhhcc---CCCCCCCCc-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1022 -LNIALDEML---DPRLPTPSC-IVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1022 -~~~~~~~~~---~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
......... .+....+.. .......++.+++.+|+..||++|||+.|++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 000110000 00122346889999999999999999999986
No 204
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=6e-31 Score=293.68 Aligned_cols=245 Identities=26% Similarity=0.438 Sum_probs=183.6
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCC----EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
.++|+..+.||+|+||.||+|.. .+|+ .||+|.+.... ......++.+|+.+++.++||||++++|+|.....
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~ 83 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTI 83 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCc
Confidence 46778889999999999999965 3454 57889876432 22334578899999999999999999999876443
Q ss_pred chhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 SLAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 ~l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
.+.+.+... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccccc
Confidence 322222111 1123578889999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 961 PDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 961 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
..... .....++..|+|||++.+..++.++||||||+++||+++ |+.||....... ....... ....+.+
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-----~~~~~~~--~~~~~~~ 233 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-----IPDLLEK--GERLPQP 233 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHC--CCCCCCC
Confidence 43221 122345678999999998899999999999999999997 999986432111 0111111 1112221
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
. .+...+.+++..||..+|++||+++|+++.|+
T Consensus 234 ~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 234 P----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred C----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1 22346899999999999999999999998764
No 205
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=2.2e-31 Score=296.01 Aligned_cols=246 Identities=23% Similarity=0.374 Sum_probs=186.5
Q ss_pred HHHhcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEe
Q 042958 811 IRATNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFC 883 (1075)
Q Consensus 811 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 883 (1075)
....++|+..+.||+|+||.||+|... ....||+|++..... .....++.+|+++++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344567888999999999999999653 236799999875422 22346788999999999 899999999998
Q ss_pred eccccchhheecCc-------------------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCC
Q 042958 884 SHVRHSLAMILSNN-------------------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSK 938 (1075)
Q Consensus 884 ~~~~~~l~~~~~~~-------------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 938 (1075)
......+.+ ++.. .....+++..+++++.|++.|++|||+. +|+||||||+
T Consensus 86 ~~~~~~~li-~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~ 161 (293)
T cd05053 86 TQEGPLYVV-VEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAAR 161 (293)
T ss_pred cCCCCeEEE-EEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ccccccccee
Confidence 765443221 1110 2245688999999999999999999999 9999999999
Q ss_pred CeeeCCCCCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCcc
Q 042958 939 NVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSM 1015 (1075)
Q Consensus 939 Nill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~ 1015 (1075)
||+++.++.+|++|||.++.+...... .....++..|+|||+..+..++.++|||||||++||+++ |..||......
T Consensus 162 Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 162 NVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred eEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 999999999999999999876543221 122234678999999988899999999999999999997 99998633211
Q ss_pred ccchhhhhhhhhhccCC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1016 SSSSLNLNIALDEMLDP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
. ........ ....+ ......+.+++.+||+.||++||||.|+++.|+
T Consensus 242 ~--------~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~ 289 (293)
T cd05053 242 E--------LFKLLKEGYRMEKP----QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLD 289 (293)
T ss_pred H--------HHHHHHcCCcCCCC----CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHH
Confidence 1 11111111 11111 123346899999999999999999999999875
No 206
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=4.6e-31 Score=293.25 Aligned_cols=242 Identities=24% Similarity=0.394 Sum_probs=187.2
Q ss_pred cCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.+|+..+.||.|+||.||+|. ..+|+.||+|.+..... ...+.+.+|+.+++.++||||+++++++......+.++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 468889999999999999995 46799999999865322 23467889999999999999999999987655433222
Q ss_pred ecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 894 LSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 894 ~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
.... .....+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 96 e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 172 (296)
T cd06655 96 EYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR 172 (296)
T ss_pred EecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccccC
Confidence 1111 1123578999999999999999999999 99999999999999999999999999988765443333
Q ss_pred eccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 967 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
....++..|+|||.+.+..++.++|||||||++|++++|+.||........ .........+.... ....+.
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~ 243 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LYLIATNGTPELQN----PEKLSP 243 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhcCCcccCC----cccCCH
Confidence 445688999999999988899999999999999999999999974332110 00011111111111 122344
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1047 SIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+.+++.+||..||++||++.++++
T Consensus 244 ~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 244 IFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhh
Confidence 6889999999999999999999985
No 207
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=3.7e-31 Score=293.41 Aligned_cols=245 Identities=21% Similarity=0.379 Sum_probs=186.0
Q ss_pred hcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
.++|+..+.||+|+||.||+|... ++..||+|++.... .....+++.+|+.++++++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 467899999999999999999653 46789999987542 2334567999999999999999999999987655
Q ss_pred cchhheec-Cc-----------------------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCC
Q 042958 888 HSLAMILS-NN-----------------------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISS 937 (1075)
Q Consensus 888 ~~l~~~~~-~~-----------------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 937 (1075)
..+.++.. .. .....+++.+++.++.|++.||+|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 43222211 00 0112467888999999999999999999 999999999
Q ss_pred CCeeeCCCCCceEeccccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCc
Q 042958 938 KNVLLDFDNEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISS 1014 (1075)
Q Consensus 938 ~Nill~~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~ 1014 (1075)
+||+++.++.++++|||.+..+..... .......+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999876543321 1122334678999999998899999999999999999997 8888753322
Q ss_pred cccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1015 MSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
. .....+.+...... ....+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 239 ~--------~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 239 E--------EVIYYVRDGNVLSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred H--------HHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 1 11222222222111 1123456999999999999999999999999885
No 208
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.3e-31 Score=305.33 Aligned_cols=185 Identities=21% Similarity=0.317 Sum_probs=150.8
Q ss_pred HHhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccch
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l 890 (1075)
....+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++......+
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeE
Confidence 34567999999999999999999664 5789999985422 2346899999999999999999987765443
Q ss_pred hheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 891 AMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 891 ~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
.++.... .....+++..++.|+.||+.||.|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 134 lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 134 MVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred EEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 2221111 1245688999999999999999999999 9999999999999999999999999999754322
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCC
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 1009 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~ 1009 (1075)
.......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 -PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred -cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 2233457899999999999999999999999999999999855543
No 209
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=4.8e-31 Score=287.02 Aligned_cols=238 Identities=26% Similarity=0.394 Sum_probs=183.1
Q ss_pred hcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.++|++.+.||+|+||.||+|... |..||+|.+.... ..+.+.+|+.++++++|+|++++++++...+.....+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 357888899999999999999776 8889999986431 2467899999999999999999999875544333333
Q ss_pred ecCcc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 894 LSNNA-----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 894 ~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
++... ....+++....+++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 22211 123478899999999999999999999 9999999999999999999999999998865432
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
. ....++..|+|||++.+..++.++||||||+++|||++ |+.||....... ..........+. ..
T Consensus 156 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~------~~ 221 (256)
T cd05082 156 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMD------AP 221 (256)
T ss_pred C---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhcCCCCC------CC
Confidence 2 22344678999999998889999999999999999997 999986322110 001111111111 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+||+.+|++|||++++++.|+
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 222 DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 233456999999999999999999999999875
No 210
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=1.1e-30 Score=290.19 Aligned_cols=241 Identities=23% Similarity=0.368 Sum_probs=184.0
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
+.|++.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|+.+++.++||||+++++++......+.+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv- 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM- 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE-
Confidence 67888999999999999999664 5899999998643 233457788999999999999999999988765533222
Q ss_pred ecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 LSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 ~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++... ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 22111 134578999999999999999999999 99999999999999999999999999987654433
Q ss_pred CceeccccccCccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 964 SNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
.......++..|+|||++. ...++.++|||||||++|||++|+.||...... ...........+. .
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~-~ 235 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSEPPT-L 235 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--------HHHHHHhcCCCcc-C
Confidence 3334456889999999885 345678999999999999999999998643221 1111111111110 0
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
......+.++.+++.+||+.||++||+++|+++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111233446899999999999999999999976
No 211
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=2.7e-31 Score=293.52 Aligned_cols=244 Identities=22% Similarity=0.276 Sum_probs=183.5
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.|+..+.||+|+||.||+|.. .+++.||||.+...........+.+..|+.++++++|++++++++++...+..+..+.
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 367778999999999999954 5789999999865433333334567889999999999999999998876554322221
Q ss_pred cC-c---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 SN-N---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 ~~-~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.. . .....+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.++++|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 11 1 1123478889999999999999999998 99999999999999999999999999997654322
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......|+..|+|||++.+..++.++||||+|+++|||++|+.||......... .......... +. ......
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-----~~~~~~~~~~-~~--~~~~~~ 228 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-----EEVERLVKEV-QE--EYSEKF 228 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-----HHHHhhhhhh-hh--hcCccC
Confidence 223457899999999999999999999999999999999999999743221100 0111111100 00 011223
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPT-----MPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs-----~~evl~ 1071 (1075)
...+.+++.+||+.||++||| ++|+++
T Consensus 229 ~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 229 SPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 446899999999999999999 888875
No 212
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=3.7e-31 Score=303.53 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=184.9
Q ss_pred HHhcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEee
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCS 884 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 884 (1075)
...++|.+.+.||+|+||.||+|++. .++.||||++...... ...+.+..|++++.++. ||||++++++|.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS--SEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh--hHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 44457888899999999999999753 3468999999764322 23457889999999997 999999999987
Q ss_pred ccccchhheecCc-------------------------------------------------------------------
Q 042958 885 HVRHSLAMILSNN------------------------------------------------------------------- 897 (1075)
Q Consensus 885 ~~~~~l~~~~~~~------------------------------------------------------------------- 897 (1075)
.....+ ++++..
T Consensus 112 ~~~~~~-iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 112 KGGPIY-IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred cCCCcE-EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 654321 111100
Q ss_pred ----------------------------------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCC
Q 042958 898 ----------------------------------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISS 937 (1075)
Q Consensus 898 ----------------------------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 937 (1075)
.....+++.+..+++.|++.|++|||+. +|+||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCc
Confidence 0112367888899999999999999998 999999999
Q ss_pred CCeeeCCCCCceEeccccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCc
Q 042958 938 KNVLLDFDNEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISS 1014 (1075)
Q Consensus 938 ~Nill~~~~~~kl~DfGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~ 1014 (1075)
+||+++.++.+|++|||+++.+..... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999999986543221 1123456788999999998889999999999999999998 8999864322
Q ss_pred cccchhhhhhhhhhccCC--CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1015 MSSSSLNLNIALDEMLDP--RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+ .....+.. +.+.+ ...+..+.+++.+||+++|.+||+++||++.|+
T Consensus 348 ~~--------~~~~~~~~~~~~~~p----~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~ 397 (401)
T cd05107 348 NE--------QFYNAIKRGYRMAKP----AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397 (401)
T ss_pred hH--------HHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11 01111111 11111 123456999999999999999999999999886
No 213
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=4.7e-31 Score=293.68 Aligned_cols=241 Identities=23% Similarity=0.376 Sum_probs=179.2
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCC--EEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccch
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGE--IVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l 890 (1075)
++|++.+.||+|+||.||+|..+ ++. .+|+|.++... .....+.+.+|+++++++ +||||+++++++......+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 57889999999999999999664 343 47888876432 223356789999999999 7999999999886644321
Q ss_pred hheecCcc-------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC
Q 042958 891 AMILSNNA-------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD 945 (1075)
Q Consensus 891 ~~~~~~~~-------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 945 (1075)
++++... ....+++..+.+++.|++.|++|||+. +|+||||||+||+++++
T Consensus 80 -lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~ 155 (297)
T cd05089 80 -IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGEN 155 (297)
T ss_pred -EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCC
Confidence 1111110 113478899999999999999999999 99999999999999999
Q ss_pred CCceEeccccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhh
Q 042958 946 NEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNI 1024 (1075)
Q Consensus 946 ~~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 1024 (1075)
+.+||+|||++....... .......+..|+|||+..+..++.++|||||||++|||++ |+.||.......
T Consensus 156 ~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-------- 226 (297)
T cd05089 156 LASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-------- 226 (297)
T ss_pred CeEEECCcCCCcccccee-ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------
Confidence 999999999986432111 1111233567999999988889999999999999999997 999986432211
Q ss_pred hhhhccCC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1025 ALDEMLDP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1025 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
........ ....+ ...+..+.+++.+||+.+|.+||+++|+++.|+
T Consensus 227 ~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 227 LYEKLPQGYRMEKP----RNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 11111 123346899999999999999999999988764
No 214
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=1.1e-31 Score=314.62 Aligned_cols=244 Identities=27% Similarity=0.467 Sum_probs=183.7
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc--
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS-- 889 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 889 (1075)
-..+|+..+.||+||||.||+++.+ ||+.||||++.... .......+.+|+..+++++|||||+++..+.+....
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 3456777788999999999999665 89999999998764 334457789999999999999999998755321100
Q ss_pred ---------------------hhhe--------------------------------e------------cCc-------
Q 042958 890 ---------------------LAMI--------------------------------L------------SNN------- 897 (1075)
Q Consensus 890 ---------------------l~~~--------------------------------~------------~~~------- 897 (1075)
..+. . +++
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 0000 0 000
Q ss_pred --cc--------------------cCC------------------------------C--CHHHHHHHHHHHHHHHHHHH
Q 042958 898 --AA--------------------AKD------------------------------L--GWTRRMNVIKGISDALSYMH 923 (1075)
Q Consensus 898 --~~--------------------~~~------------------------------l--~~~~~~~i~~~i~~~L~~LH 923 (1075)
.+ ..+ + .-...++++.+|++||+|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 00 000 0 01233678999999999999
Q ss_pred hCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC------------------CCCCceeccccccCccCccccccCC
Q 042958 924 NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK------------------PDSSNWTELAGTYGYVAPELAYTMK 985 (1075)
Q Consensus 924 ~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~------------------~~~~~~~~~~gt~~y~aPE~~~~~~ 985 (1075)
+. |||||||||.||++|++..+||+|||+|+... .+....+..+||.-|+|||.+.+..
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99 99999999999999999999999999998722 0112345678999999999987654
Q ss_pred ---CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCC
Q 042958 986 ---VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPES 1062 (1075)
Q Consensus 986 ---~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 1062 (1075)
|+.|+|+||+|+|++||+. ||. ........+....++.+|.+........+.=.++|.+++++||.+
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~-------TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~k 861 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFG-------TSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSK 861 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCC-------chHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCcc
Confidence 9999999999999999986 443 122233455666677777765555566667789999999999999
Q ss_pred CCCHHHHHh
Q 042958 1063 RPTMPKVSQ 1071 (1075)
Q Consensus 1063 RPs~~evl~ 1071 (1075)
||||.|++.
T Consensus 862 RPtA~eLL~ 870 (1351)
T KOG1035|consen 862 RPTATELLN 870 (1351)
T ss_pred CCCHHHHhh
Confidence 999999985
No 215
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=6.3e-31 Score=288.26 Aligned_cols=246 Identities=24% Similarity=0.338 Sum_probs=182.8
Q ss_pred HHHHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 810 IIRATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 810 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
++.+++.+.....||+|+||.||+|.. .+++.||+|.+... .....+.+.+|+.++++++|+||+++++++...+.
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF 79 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence 345566777778999999999999964 46888999987643 22335688999999999999999999999877554
Q ss_pred chhheecCcc----------ccCCC--CHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC-CCCceEecccc
Q 042958 889 SLAMILSNNA----------AAKDL--GWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF-DNEAHVSDFGI 955 (1075)
Q Consensus 889 ~l~~~~~~~~----------~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGl 955 (1075)
.+.+ ++... ....+ ++..+..++.||++|++|||+. +|+||||||+||+++. ++.++|+|||.
T Consensus 80 ~~lv-~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~ 155 (268)
T cd06624 80 FKIF-MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGT 155 (268)
T ss_pred EEEE-EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchh
Confidence 3222 22111 11234 6777888999999999999999 9999999999999986 67999999999
Q ss_pred ccccCCCCCceeccccccCccCccccccCC--CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCC
Q 042958 956 AKFLKPDSSNWTELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPR 1033 (1075)
Q Consensus 956 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1075)
+..............+++.|+|||++.+.. ++.++||||||+++|+|++|+.||.......... ........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~------~~~~~~~~ 229 (268)
T cd06624 156 SKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM------FKVGMFKI 229 (268)
T ss_pred heecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH------hhhhhhcc
Confidence 987654333334456889999999986543 7889999999999999999999986432211000 00000001
Q ss_pred CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1034 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+ ........++.+++.+||+.+|++|||+.|+++
T Consensus 230 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 HP---EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CC---CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 11 112233456899999999999999999999986
No 216
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=4.3e-32 Score=299.70 Aligned_cols=238 Identities=23% Similarity=0.381 Sum_probs=178.7
Q ss_pred CCCceecccCceEEEEE-EECCCCEEE---EEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 818 DDEHCIGKGGQGSVYKA-ELASGEIVA---VKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 818 ~~~~~lG~G~~g~Vy~~-~~~~g~~va---vK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
....+||+|+|-+|||| +-.+|..|| ||.-... ......++|..|+.+|+.|+|||||++|.++.+.......+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~--q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~ 120 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVT--QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINF 120 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhh--cChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeee
Confidence 34467999999999999 555688777 3322111 22334588999999999999999999999998765532222
Q ss_pred ec----------CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC-CCceEeccccccccCCC
Q 042958 894 LS----------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 894 ~~----------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla~~~~~~ 962 (1075)
.. +...-+.++....++|+.||++||.|||++ .|+|+|||||-+||+++.+ |.+||+|+|+|......
T Consensus 121 iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred eeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 11 112234567778889999999999999998 6799999999999999865 79999999999987643
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
.....+|||.|||||+.. ..|.+.+||||||++|+||.|+.+||...... -...+++..+.-|.. ...
T Consensus 200 --~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-------AQIYKKV~SGiKP~s--l~k 267 (632)
T KOG0584|consen 200 --HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-------AQIYKKVTSGIKPAA--LSK 267 (632)
T ss_pred --ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-------HHHHHHHHcCCCHHH--hhc
Confidence 334479999999999877 67999999999999999999999998643321 111222222222211 111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
-..+++.++|.+|+.. .++|||+.|+++
T Consensus 268 V~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 VKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred cCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1234699999999999 999999999986
No 217
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=6.7e-31 Score=287.80 Aligned_cols=242 Identities=23% Similarity=0.429 Sum_probs=184.9
Q ss_pred cCCCCCceecccCceEEEEEEEC-C---CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccch
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-S---GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l 890 (1075)
.+|++.+.||+|+||.||+|... + +..||+|.++... .....+.+..|+.++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 56788899999999999999653 2 3479999986542 2233568999999999999999999999987655432
Q ss_pred hheecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 891 AMILSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 891 ~~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
++++... ....+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||.+..+.
T Consensus 82 -lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 82 -IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred -EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 2222221 124578899999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcee---ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCC
Q 042958 961 PDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLP 1035 (1075)
Q Consensus 961 ~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1035 (1075)
....... ...++..|+|||++.+..++.++||||||+++||+++ |+.||......+ ....+.+. +.+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~~~~ 229 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--------VIKAIEEGYRLP 229 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--------HHHHHhCCCcCC
Confidence 4332211 1223568999999998889999999999999999986 999986432211 11111111 112
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+ ...+..+.+++.+|++++|.+||+|.++++.|+
T Consensus 230 ~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 230 AP----MDCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred CC----CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 11 123446899999999999999999999999874
No 218
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=4.3e-31 Score=291.02 Aligned_cols=244 Identities=23% Similarity=0.359 Sum_probs=183.2
Q ss_pred HhcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecc
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHV 886 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 886 (1075)
.+++|++.+.||+|+||.||+|... .+..||+|.+.... .......|..|+.++++++|+||+++++++.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 3567889999999999999999664 35789999876432 223346789999999999999999999988765
Q ss_pred ccchhheecCcc----------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC---C
Q 042958 887 RHSLAMILSNNA----------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN---E 947 (1075)
Q Consensus 887 ~~~l~~~~~~~~----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~ 947 (1075)
...+.+ ++... ....++|.++.+++.||+.|++|||+. +++||||||+||+++.++ .
T Consensus 82 ~~~~lv-~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 82 LPRFIL-LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred CCcEEE-EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcc
Confidence 443222 11110 112588999999999999999999999 999999999999998765 5
Q ss_pred ceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhh
Q 042958 948 AHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNI 1024 (1075)
Q Consensus 948 ~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 1024 (1075)
+|++|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||+......
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-------- 229 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-------- 229 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--------
Confidence 999999999876432211 112233568999999998899999999999999999997 999986432211
Q ss_pred hhhhcc-CCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1025 ALDEML-DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1025 ~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
....+. ..+...+ ...+..+.+++.+|++.+|++||++.||++.|+
T Consensus 230 ~~~~~~~~~~~~~~----~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 230 VMEFVTGGGRLDPP----KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 011111 1111111 223456899999999999999999999999874
No 219
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=4.9e-31 Score=292.22 Aligned_cols=246 Identities=22% Similarity=0.344 Sum_probs=183.9
Q ss_pred HHhcCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeec
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH 885 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 885 (1075)
...++|++.+.||+|+||.||+|..+ .+..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK 80 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 34678999999999999999999543 24589999886432 22334568899999999999999999998876
Q ss_pred cccchhheecCcc-------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC
Q 042958 886 VRHSLAMILSNNA-------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN 946 (1075)
Q Consensus 886 ~~~~l~~~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 946 (1075)
.... +++++... .....++....+++.|++.|+.|||+. +|+||||||+||+++.++
T Consensus 81 ~~~~-~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~ 156 (288)
T cd05061 81 GQPT-LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 156 (288)
T ss_pred CCCc-EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCC
Confidence 5433 22222111 112345677888999999999999999 999999999999999999
Q ss_pred CceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhh
Q 042958 947 EAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLN 1023 (1075)
Q Consensus 947 ~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~ 1023 (1075)
.+|++|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--------~ 228 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------E 228 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--------H
Confidence 9999999999865433221 122345678999999998889999999999999999998 7888863221 1
Q ss_pred hhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1024 IALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.......+...... ....+..+.+++.+|++.||++|||+.|+++.|+
T Consensus 229 ~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 276 (288)
T cd05061 229 QVLKFVMDGGYLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276 (288)
T ss_pred HHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11122222211111 1122356999999999999999999999998764
No 220
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=7.5e-31 Score=287.13 Aligned_cols=242 Identities=27% Similarity=0.393 Sum_probs=188.3
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-chhhe
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-SLAMI 893 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~l~~~ 893 (1075)
+|++.+.||.|+||.||+|.. .+|+.||+|++..... .....+++..|++++++++||||+++++++..... .+.++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 478889999999999999954 5789999999865432 23345678899999999999999999998764332 22222
Q ss_pred ecCc-------------cccCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCeEEecCCCCCeeeCCCCCceEecccc
Q 042958 894 LSNN-------------AAAKDLGWTRRMNVIKGISDALSYMH-----NDCFPPIVHRDISSKNVLLDFDNEAHVSDFGI 955 (1075)
Q Consensus 894 ~~~~-------------~~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGl 955 (1075)
++.. .....+++...+.++.|+++|++||| +. +++|+||+|+||+++.++.+|++|||+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccc
Confidence 2211 11356889999999999999999999 66 999999999999999999999999999
Q ss_pred ccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCC
Q 042958 956 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLP 1035 (1075)
Q Consensus 956 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1075)
+..............+++.|+|||++.+..++.++||||||+++|+|++|+.||...... ...+.+.....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 228 (265)
T cd08217 157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--------QLASKIKEGKFR 228 (265)
T ss_pred cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--------HHHHHHhcCCCC
Confidence 988765443344557899999999999888999999999999999999999998743211 111122222221
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
. .....+..+.+++.+|++.+|++||+++||++.
T Consensus 229 ~---~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 R---IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred C---CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1 122344579999999999999999999999863
No 221
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.97 E-value=9.7e-31 Score=285.77 Aligned_cols=238 Identities=26% Similarity=0.367 Sum_probs=174.9
Q ss_pred ceecccCceEEEEEEEC----CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecC
Q 042958 821 HCIGKGGQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSN 896 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~ 896 (1075)
+.||+|+||.||+|... ++..||+|++... ......+.+.+|+.+++.++||||+++++++...+.....+++.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 46899999999999653 2457999987542 22334568889999999999999999999886544332333222
Q ss_pred cc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC--
Q 042958 897 NA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS-- 964 (1075)
Q Consensus 897 ~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-- 964 (1075)
.. ......+.....++.|+++|++|||+. +++||||||+||+++.++.+||+|||+++.+.....
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 11 123357778889999999999999999 999999999999999999999999999986543211
Q ss_pred --ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhC-CCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 965 --NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-KHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 965 --~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
......++..|+|||+..+..++.++||||||+++|||++| ..||...... ...........+.. .
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~---~ 224 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--------DITVYLLQGRRLLQ---P 224 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhcCCCCCC---C
Confidence 11223456789999999888999999999999999999995 5555432211 11111111111111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+||+.+|++||++.||++.|+
T Consensus 225 ~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 225 EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 122346899999999999999999999999875
No 222
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=1.2e-31 Score=323.50 Aligned_cols=246 Identities=22% Similarity=0.331 Sum_probs=184.0
Q ss_pred HHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-c
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-S 889 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~ 889 (1075)
...++|++.+.||+|+||.||+|.. .+++.||+|.+...... ......|..|+.++++++|||||+++++|..... .
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 4457899999999999999999955 46788999998754322 2345778999999999999999999998865432 2
Q ss_pred hhheecCcc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCC----CCeEEecCCCCCeeeCCC-------
Q 042958 890 LAMILSNNA-------------AAKDLGWTRRMNVIKGISDALSYMHNDCF----PPIVHRDISSKNVLLDFD------- 945 (1075)
Q Consensus 890 l~~~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~ivH~Dlk~~Nill~~~------- 945 (1075)
++++++... ....+++...+.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 222222211 12468899999999999999999998521 269999999999999643
Q ss_pred ----------CCceEeccccccccCCCCCceeccccccCccCcccccc--CCCCcccchHhHHHHHHHHHhCCCCCCccC
Q 042958 946 ----------NEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFIS 1013 (1075)
Q Consensus 946 ----------~~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~ 1013 (1075)
+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 348999999998764332 2234578999999998854 458899999999999999999999996432
Q ss_pred ccccchhhhhhhhhhccC-CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1014 SMSSSSLNLNIALDEMLD-PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
... .....+.. +.++. ...+.++.+++..||+.+|.+||++.|+++
T Consensus 248 ~~~-------qli~~lk~~p~lpi-----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 NFS-------QLISELKRGPDLPI-----KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred cHH-------HHHHHHhcCCCCCc-----CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 211 11111111 11111 123456999999999999999999999984
No 223
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=4.4e-31 Score=290.49 Aligned_cols=241 Identities=26% Similarity=0.410 Sum_probs=187.6
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||.|+||.||+|... +++.||+|.+.... .......+.+|+++++.++|+||+++++++.+....+ ++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLW-II 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEE-EE
Confidence 36788899999999999999654 68999999986542 2233567889999999999999999999887654332 22
Q ss_pred ecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 LSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 ~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
.+... ....+++.....++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.++........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 78 MEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred EEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence 22111 123689999999999999999999999 9999999999999999999999999999887654344
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
.....+++.|+|||++.+..++.++||||||+++|||++|+.||........ .........+..+. ...+
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~~ 224 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-----LFLIPKNNPPSLEG-----NKFS 224 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-----HHHhhhcCCCCCcc-----cccC
Confidence 4456788899999999988899999999999999999999999964332110 00111111111111 1134
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+.+++.+||..||++|||++|+++
T Consensus 225 ~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 225 KPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 56899999999999999999999976
No 224
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=4.2e-31 Score=294.83 Aligned_cols=251 Identities=16% Similarity=0.216 Sum_probs=183.2
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|... +++.||+|.+....... ....+.+|+.++++++||||+++++++......+. +
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l-v 82 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL-V 82 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC--chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE-E
Confidence 57888999999999999999654 68999999986543222 23567789999999999999999999876554322 2
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 83 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 83 FEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred EeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 2211 1234578888999999999999999999 999999999999999999999999999986544333
Q ss_pred ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh-------hhhhhh------hcc
Q 042958 965 NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN-------LNIALD------EML 1030 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~-------~~~~~~------~~~ 1030 (1075)
......+++.|+|||.+.+. .++.++||||+|+++|||++|+.||......+..... ...... ...
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 33445678999999987654 5788999999999999999999999743321100000 000000 000
Q ss_pred CCCCCCCC-----cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1031 DPRLPTPS-----CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1031 ~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+... ......+..+.+++.+|++.||.+|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00111000 001123446889999999999999999999986
No 225
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=4.6e-31 Score=292.67 Aligned_cols=244 Identities=27% Similarity=0.350 Sum_probs=182.5
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccchhhe
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~l~~~ 893 (1075)
+|+..+.||+|+||.||++.. .+++.||+|++...... .....+.+|+.++.++. ||||+++++++......+..+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 455667899999999999955 46899999998754322 34567889999999996 999999999887654432211
Q ss_pred -ecCc-----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 894 -LSNN-----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 894 -~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+... .....+++....+++.|++.|++|||+.. +++||||||+||+++.++.+||+|||+++....
T Consensus 83 e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 83 ELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred ecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 1110 12356888999999999999999999742 899999999999999999999999999976543
Q ss_pred CCCceeccccccCccCccccccC---CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCC-C
Q 042958 962 DSSNWTELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPT-P 1037 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 1037 (1075)
... .....|+..|+|||++.+. .++.++||||+|+++|||++|+.||..... ......+......+. +
T Consensus 161 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~ 232 (288)
T cd06616 161 SIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-------VFDQLTQVVKGDPPILS 232 (288)
T ss_pred CCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-------HHHHHhhhcCCCCCcCC
Confidence 322 2334688899999998766 688999999999999999999999864321 011111211111111 1
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.......+.++.+++.+||+.||++|||++||++
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 233 NSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111234567999999999999999999999986
No 226
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.97 E-value=3.4e-31 Score=295.50 Aligned_cols=242 Identities=23% Similarity=0.378 Sum_probs=180.5
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCC--EEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGE--IVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 889 (1075)
.++|++.+.||+|+||.||+|..+ ++. .+|+|.+... ......+++.+|++++.++ +||||+++++++...+..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 467888899999999999999654 454 4577776542 2233456788999999999 899999999998765543
Q ss_pred hhheecCcc-------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC
Q 042958 890 LAMILSNNA-------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF 944 (1075)
Q Consensus 890 l~~~~~~~~-------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 944 (1075)
+.. ++... ....+++.+++.++.|++.|++|||+. +|+||||||+||+++.
T Consensus 84 ~lv-~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~ 159 (303)
T cd05088 84 YLA-IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGE 159 (303)
T ss_pred eEE-EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecC
Confidence 222 21110 123578899999999999999999999 9999999999999999
Q ss_pred CCCceEeccccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhh
Q 042958 945 DNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLN 1023 (1075)
Q Consensus 945 ~~~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~ 1023 (1075)
++.+||+|||++...... .......++..|+|||++.+..++.++||||||+++|||+| |+.||......+
T Consensus 160 ~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------- 231 (303)
T cd05088 160 NYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------- 231 (303)
T ss_pred CCcEEeCccccCcccchh-hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-------
Confidence 999999999998643211 11112234668999999988889999999999999999998 999986332211
Q ss_pred hhhhhccCC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1024 IALDEMLDP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1024 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
........ ....+ ...+..+.+++.+||+.+|++||+++++++.++
T Consensus 232 -~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 232 -LYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred -HHHHHhcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 11111 123346899999999999999999999998764
No 227
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=7.1e-31 Score=287.46 Aligned_cols=243 Identities=22% Similarity=0.345 Sum_probs=181.6
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCC--CchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc-cch
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLP--GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR-HSL 890 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~l 890 (1075)
.+|+..+.||+|+||.||+|.. .++..||+|++..... ......+.+.+|+.++++++||||+++++++.... ..+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688899999999999999955 5689999998865322 22233467889999999999999999999886532 222
Q ss_pred hheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 891 AMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 891 ~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
.++++... ....+++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 22222211 234578888999999999999999998 999999999999999999999999999986543
Q ss_pred CC---CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 962 DS---SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 962 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
.. .......++..|+|||++.+..++.++||||+|+++||+++|+.||....... ...........+.+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~---- 230 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA----AIFKIATQPTNPQL---- 230 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH----HHHHHhcCCCCCCC----
Confidence 21 12233568899999999999889999999999999999999999986432111 00000001111111
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.......+.+++ .||..+|++||+|+||++
T Consensus 231 --~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 231 --PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred --chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 122334567777 688899999999999986
No 228
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=8e-31 Score=287.34 Aligned_cols=241 Identities=29% Similarity=0.454 Sum_probs=184.4
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCch------hHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEM------TFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
+|.+...||+|+||.||+|.. .+++.||+|.+........ ...+.+.+|+.++++++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 467788999999999999954 4689999998875433221 233578899999999999999999999877554
Q ss_pred chhheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 889 SLAMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 889 ~l~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
.+.+ ++... ....+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.++..
T Consensus 81 ~~lv-~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIF-LEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEE-EEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 3322 22211 124578888899999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC------ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCC
Q 042958 960 KPDSS------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPR 1033 (1075)
Q Consensus 960 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1075)
..... ......|+..|+|||.+.+..++.++||||+|+++|||++|+.||....... ..........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~ 231 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-----AIFKIGENASPE 231 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-----HHHHHhccCCCc
Confidence 53211 1123457889999999998889999999999999999999999997432211 001111111112
Q ss_pred CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1034 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+ ...+..+.+++.+||+.||++||++.||++
T Consensus 232 ~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 232 IP------SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CC------cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11 223456899999999999999999999986
No 229
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.97 E-value=1.3e-30 Score=284.40 Aligned_cols=230 Identities=20% Similarity=0.354 Sum_probs=171.5
Q ss_pred ceecccCceEEEEEEECC-------------CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 821 HCIGKGGQGSVYKAELAS-------------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
+.||+|+||.||+|...+ ...||+|.+... .......+.+|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999996532 235889987643 2233467889999999999999999999987654
Q ss_pred cchhheecCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCC-------ceE
Q 042958 888 HSLAMILSNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE-------AHV 950 (1075)
Q Consensus 888 ~~l~~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-------~kl 950 (1075)
..+. +++.. .....+++..+.+++.||++|++|||+. +|+||||||+||+++.++. +++
T Consensus 78 ~~~l-v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 78 ENIM-VEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred CCEE-EEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 4322 22111 1234588999999999999999999999 9999999999999987664 899
Q ss_pred eccccccccCCCCCceeccccccCccCccccc-cCCCCcccchHhHHHHHHHHH-hCCCCCCccCccccchhhhhhhhhh
Q 042958 951 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSSSSLNLNIALDE 1028 (1075)
Q Consensus 951 ~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1075)
+|||.+...... ....++..|+|||++. +..++.++||||||+++|||+ +|+.||......+ ...
T Consensus 154 ~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---------~~~ 220 (262)
T cd05077 154 SDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE---------KER 220 (262)
T ss_pred CCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH---------HHH
Confidence 999998765422 2345788999999886 466899999999999999998 5888875322111 011
Q ss_pred ccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
......... .....++.+++.+||+.||++||++.||++.+.
T Consensus 221 ~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 221 FYEGQCMLV----TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHhcCccCC----CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 111111111 112346899999999999999999999998763
No 230
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=6e-31 Score=286.34 Aligned_cols=241 Identities=20% Similarity=0.295 Sum_probs=186.8
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|+||.||++.. .+|+.||+|++...... ....+++.+|+.++++++||||+++++++......+.++.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 478889999999999999954 57899999998654322 2234678999999999999999999999876654432221
Q ss_pred cCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 SNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 ~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
... .....+++.+.++++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 111 1123468889999999999999999999 999999999999999999999999999987654433
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......|++.|+|||+..+..++.++||||||+++|++++|+.||..... ............+. .....
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~~~~~---~~~~~ 225 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--------KNLVLKIIRGSYPP---VSSHY 225 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--------HHHHHHHhcCCCCC---CcccC
Confidence 33345688899999999988899999999999999999999999863211 11122222222211 11233
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..++.+++.+||+.+|.+||++.||++
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 226 SYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 456999999999999999999999986
No 231
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=1e-30 Score=284.50 Aligned_cols=238 Identities=26% Similarity=0.398 Sum_probs=184.9
Q ss_pred hcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++......+. +
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~-v 78 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYI-V 78 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEE-E
Confidence 457888999999999999999776 89999999875422 35789999999999999999999999876433222 2
Q ss_pred ecCcc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 894 LSNNA-----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 894 ~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
++... ....+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 21111 112589999999999999999999999 9999999999999999999999999999876322
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
.. ....+..|+|||++.+..++.++||||||+++||+++ |+.||....... ........ ..... .
T Consensus 156 ~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~--~~~~~----~ 221 (256)
T cd05039 156 QD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPHVEKG--YRMEA----P 221 (256)
T ss_pred cc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHhcC--CCCCC----c
Confidence 11 2345678999999988889999999999999999997 999986332111 11111110 11111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+||..+|++|||++|++++|+
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 223456899999999999999999999999874
No 232
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=6.8e-31 Score=293.59 Aligned_cols=245 Identities=22% Similarity=0.352 Sum_probs=184.9
Q ss_pred HHhcCCCCCceecccCceEEEEEEEC--------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEE
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGF 882 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 882 (1075)
...++|++.+.||+|+||.||+|+.. ++..||+|.+.... .....+.+.+|+.+++.+ +||||++++++
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 34567888999999999999999641 34579999986432 223356789999999999 89999999998
Q ss_pred eeccccchhheecCcc-------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCC
Q 042958 883 CSHVRHSLAMILSNNA-------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISS 937 (1075)
Q Consensus 883 ~~~~~~~l~~~~~~~~-------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 937 (1075)
+......+. +++... ....+++.++..++.||++|++|||+. +|+||||||
T Consensus 90 ~~~~~~~~l-v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 165 (304)
T cd05101 90 CTQDGPLYV-IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAA 165 (304)
T ss_pred EecCCceEE-EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 876543322 111110 123578889999999999999999999 999999999
Q ss_pred CCeeeCCCCCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCc
Q 042958 938 KNVLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISS 1014 (1075)
Q Consensus 938 ~Nill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~ 1014 (1075)
+||+++.++.+||+|||.++.+...... .....+++.|+|||++.+..++.++||||||+++||+++ |..||.....
T Consensus 166 ~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 245 (304)
T cd05101 166 RNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 245 (304)
T ss_pred ceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 9999999999999999999876543222 122345678999999998889999999999999999998 7888764322
Q ss_pred cccchhhhhhhhhhccCC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1015 MSSSSLNLNIALDEMLDP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+ ........ .... ....+..+.+++.+||+.+|++|||+.||++.|+
T Consensus 246 ~~--------~~~~~~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~ 294 (304)
T cd05101 246 EE--------LFKLLKEGHRMDK----PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLD 294 (304)
T ss_pred HH--------HHHHHHcCCcCCC----CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 11 11111111 1111 1233456999999999999999999999999874
No 233
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=1.2e-30 Score=285.04 Aligned_cols=242 Identities=27% Similarity=0.413 Sum_probs=187.4
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|.. .+++.+|+|.+...... ..+.+.+|++++++++||||+++++++......+ .+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~-l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLW-IV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEE-EE
Confidence 6788899999999999999965 46889999998754322 3578899999999999999999999887654432 22
Q ss_pred ecCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 LSNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 ~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++.. .....+++.+...++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 2211 1125688899999999999999999999 99999999999999999999999999998765443
Q ss_pred CceeccccccCccCccccccC---CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC-Cc
Q 042958 964 SNWTELAGTYGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP-SC 1039 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1039 (1075)
.......++..|+|||.+.+. .++.++||||||+++|||++|+.||........ ........+..+ ..
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~--------~~~~~~~~~~~~~~~ 227 (262)
T cd06613 156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA--------LFLISKSNFPPPKLK 227 (262)
T ss_pred hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHhccCCCcccc
Confidence 333445788899999998776 789999999999999999999999864332110 000111101110 11
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1040 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.....+.++.+++.+||+.+|.+|||+.||++
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 12344567999999999999999999999985
No 234
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=5.9e-31 Score=293.28 Aligned_cols=246 Identities=22% Similarity=0.376 Sum_probs=185.3
Q ss_pred HhcCCCCCceecccCceEEEEEEE------CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeec
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL------ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSH 885 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 885 (1075)
..++|...+.||+|+||.||+|.. .++..||||+++.... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 346788999999999999999953 2355799999875422 23356789999999999 79999999999876
Q ss_pred cccchhheecCcc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccc
Q 042958 886 VRHSLAMILSNNA-----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFG 954 (1075)
Q Consensus 886 ~~~~l~~~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 954 (1075)
.+..+.. ++... ....+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.++++|||
T Consensus 111 ~~~~~lv-~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 111 GGPILVI-TEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred CCceEEE-EEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 5543222 22111 122378999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccC
Q 042958 955 IAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLD 1031 (1075)
Q Consensus 955 la~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1075)
+++........ .....++..|+|||++.+..++.++||||+|+++|||++ |+.||....... .......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--------~~~~~~~ 258 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--------KFYKLIK 258 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH--------HHHHHHH
Confidence 99866543221 122345678999999998889999999999999999998 999986432211 0111111
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1032 PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1032 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...... .....+..+.+++.+|++++|++|||+.||++.|+
T Consensus 259 ~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~ 299 (302)
T cd05055 259 EGYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIG 299 (302)
T ss_pred cCCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 111110 01122346999999999999999999999999875
No 235
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=6.5e-31 Score=292.33 Aligned_cols=242 Identities=23% Similarity=0.367 Sum_probs=187.2
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
..+|+..+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++......+.+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 46889999999999999999964 5799999999865322 2246788999999999999999999998765543322
Q ss_pred eecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 893 ILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 893 ~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.++..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||.+........
T Consensus 95 -~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 95 -MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred -ecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 22111 123578889999999999999999999 999999999999999999999999999987654433
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......+++.|+|||...+..++.++||||||+++|++++|+.||......... ........+ +.......
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~--------~~~~~~~~~-~~~~~~~~ 241 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL--------YLIATNGTP-ELQNPERL 241 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe--------eeeccCCCC-CCCCcccc
Confidence 334457889999999999888999999999999999999999999643221100 000000000 00111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+.+++.+||+.+|++||+++||++
T Consensus 242 ~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 242 SAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 446889999999999999999999986
No 236
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=1.2e-30 Score=283.89 Aligned_cols=243 Identities=23% Similarity=0.316 Sum_probs=189.6
Q ss_pred CCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|+||.||.++ ..+++.||+|++...... ....+++.+|++++++++|+||+++++++.+....+..+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 47888999999999999994 456899999998654322 2335678899999999999999999999877554322211
Q ss_pred -cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 -SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 -~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
... .....+++.++..++.|+++|++|||+. +++||||+|+||+++.++.+||+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 111 1134578899999999999999999999 999999999999999999999999999987655443
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......+++.|+|||+..+..++.++||||||+++|||++|+.||+.... ......+.....+.. ....
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~~ 225 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--------LNLVVKIVQGNYTPV---VSVY 225 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCC---cccc
Confidence 34456789999999999888899999999999999999999999864221 111222222222211 1233
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
+..+.+++.+||+.+|.+||+++|+++.+
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 226 SSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 45689999999999999999999999864
No 237
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=9.7e-31 Score=289.32 Aligned_cols=251 Identities=21% Similarity=0.359 Sum_probs=185.5
Q ss_pred cCCCCCceecccCceEEEEEEE-----CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-----ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH- 888 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 888 (1075)
..|++.+.||+|+||.||+|.. .++..||+|.++... .....+.+.+|+++++.++|||++++++++...+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 4578889999999999999963 357899999986542 23345689999999999999999999999876532
Q ss_pred chhheecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 889 SLAMILSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 889 ~l~~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
...++++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccc
Confidence 2222222211 123578999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc---eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccc-------cchhhhhhhhhh
Q 042958 959 LKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMS-------SSSLNLNIALDE 1028 (1075)
Q Consensus 959 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~-------~~~~~~~~~~~~ 1028 (1075)
+...... .....++..|+|||++.+..++.++||||||+++||+++++.|........ ............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 6543321 123456778999999988889999999999999999999877643211000 000000111111
Q ss_pred ccCC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1029 MLDP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1029 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.... ..+. ....+..+.+++.+||+.+|++|||++|+++.++
T Consensus 239 ~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 281 (284)
T cd05079 239 LEEGKRLPR----PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFE 281 (284)
T ss_pred HHcCccCCC----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1111 1111 1234457999999999999999999999999875
No 238
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.97 E-value=1.3e-30 Score=285.92 Aligned_cols=244 Identities=25% Similarity=0.472 Sum_probs=184.9
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCC---EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGE---IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
..+|+..+.||+|+||.||+|... ++. .||+|.+.... .....+.+..|++++++++|||++++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 346788899999999999999664 333 79999986532 233356799999999999999999999998766543
Q ss_pred hhheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 890 LAMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 890 l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
+.++.... .....+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 32221111 1134578999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCce-e--ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCC
Q 042958 961 PDSSNW-T--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLP 1035 (1075)
Q Consensus 961 ~~~~~~-~--~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1035 (1075)
...... . ....+..|+|||++.+..++.++||||||+++||+++ |+.||...... .....+... ..+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--------~~~~~i~~~~~~~ 230 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--------EVMKAINDGFRLP 230 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--------HHHHHHhcCCCCC
Confidence 332211 1 1123457999999998889999999999999999997 99998643221 111111111 112
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+ .+.+..+.+++.+||+.+|++||++.+|++.|+
T Consensus 231 ~~----~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~ 265 (268)
T cd05063 231 AP----MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLD 265 (268)
T ss_pred CC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11 233456899999999999999999999999874
No 239
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=8.1e-31 Score=290.42 Aligned_cols=252 Identities=24% Similarity=0.382 Sum_probs=187.3
Q ss_pred cHHHHHHHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEe
Q 042958 806 VYEEIIRATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFC 883 (1075)
Q Consensus 806 ~~~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 883 (1075)
.++++.++.++|++.+.||+|+||.||+|.. .+++.||+|++.... ....++..|+.+++++ +||||+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 3455667889999999999999999999955 468899999875421 1235678899999999 699999999987
Q ss_pred ecc----ccchhheecCc-------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC
Q 042958 884 SHV----RHSLAMILSNN-------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN 946 (1075)
Q Consensus 884 ~~~----~~~l~~~~~~~-------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 946 (1075)
... +..+..++++. .....+++..+..++.|+++|+.|||+. +++||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 432 11122222211 1234577888899999999999999999 999999999999999999
Q ss_pred CceEeccccccccCCCCCceeccccccCccCcccccc-----CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh
Q 042958 947 EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN 1021 (1075)
Q Consensus 947 ~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~ 1021 (1075)
.+|++|||.++.+...........|++.|+|||++.. ..++.++||||+||++|||++|+.||.........
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~--- 238 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL--- 238 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH---
Confidence 9999999999876544333344578999999998753 44788999999999999999999998643221100
Q ss_pred hhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1022 LNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
........+....+ ......+.+++.+||+.||++|||+.||++..
T Consensus 239 --~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 --FKIPRNPPPTLHQP----ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred --hhccccCCCcccCC----CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00001111111111 11234589999999999999999999998753
No 240
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=9.5e-31 Score=290.56 Aligned_cols=249 Identities=26% Similarity=0.393 Sum_probs=187.3
Q ss_pred HHHHHHHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEee
Q 042958 807 YEEIIRATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 884 (1075)
Q Consensus 807 ~~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 884 (1075)
..++..+.++|++.+.||+|+||.||+|.. .+++.||+|++.... ....++.+|+.+++++ +|||++++++++.
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 345556788999999999999999999965 578999999986431 1246678899999999 8999999999986
Q ss_pred cccc----chhheecCc-------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCC
Q 042958 885 HVRH----SLAMILSNN-------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE 947 (1075)
Q Consensus 885 ~~~~----~l~~~~~~~-------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 947 (1075)
..+. ....++++. .....+++..++.++.|++.|++|||+. +++||||||+||+++.++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCC
Confidence 5432 122222211 1235678999999999999999999999 9999999999999999999
Q ss_pred ceEeccccccccCCCCCceeccccccCccCccccccC-----CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh
Q 042958 948 AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL 1022 (1075)
Q Consensus 948 ~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~ 1022 (1075)
+||+|||.+..............|+..|+|||++... .++.++|||||||++|||++|+.||........
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~----- 241 (291)
T cd06639 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT----- 241 (291)
T ss_pred EEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-----
Confidence 9999999998765433333345688999999987643 368899999999999999999999864322110
Q ss_pred hhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1023 NIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.........+.... .......+.+++.+||+.+|++||++.|+++
T Consensus 242 ~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 242 LFKIPRNPPPTLLH----PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHhcCCCCCCCc----ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00011111111111 1223346999999999999999999999986
No 241
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=6.8e-31 Score=291.09 Aligned_cols=252 Identities=21% Similarity=0.372 Sum_probs=186.2
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|..+ +|+.||+|++...... ....+.+.+|+.++++++||||+++++++......+.++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 46888899999999999999665 6899999998653222 223456889999999999999999999987755432222
Q ss_pred -ecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 -LSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 -~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
.... .....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD 156 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCccc
Confidence 1111 1234589999999999999999999998 9999999999999999999999999999877654433
Q ss_pred eeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhh-------hhccC------
Q 042958 966 WTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIAL-------DEMLD------ 1031 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~~~------ 1031 (1075)
.....++..|+|||++.+ ..++.++||||||+++|||++|+.||......+... ...... .+..+
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07847 157 YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLY-LIRKTLGDLIPRHQQIFSTNQFFK 235 (286)
T ss_pred ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHHhCCCChHHhhhcccccccc
Confidence 444567889999999876 457899999999999999999999997433211100 000000 00000
Q ss_pred -CCCCCCCc------CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1032 -PRLPTPSC------IVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1032 -~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+.+.. .....+..+.+++.+||+.||++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00111100 01123456899999999999999999999986
No 242
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=6e-31 Score=288.28 Aligned_cols=243 Identities=24% Similarity=0.350 Sum_probs=182.5
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.+++.++||||+++++++......+ ++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~-lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLW-IC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE-EE
Confidence 4677778899999999999954 578999999986542 122356788999999999999999999887654432 22
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.+.+.++.|++.|+.|||+. +++|+||||+||+++.++.+||+|||++........
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 2211 1234678899999999999999999999 999999999999999999999999999987654433
Q ss_pred ceeccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 965 NWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
......|+..|+|||++. ...++.++||||+||++|||++|+.||.......... .........+.... .
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~----~ 234 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMTKSNFQPPKLKD----K 234 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH---hhhccCCCCCcccc----c
Confidence 344567899999999874 4558899999999999999999999985332211000 00000111111111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+..+.+++.+|++.+|++||++++|++
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 235 MKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 122346889999999999999999999976
No 243
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=7.7e-31 Score=293.50 Aligned_cols=244 Identities=24% Similarity=0.358 Sum_probs=182.7
Q ss_pred hcCCCCCceecccCceEEEEEEEC--------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEee
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 884 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 884 (1075)
.++|.+.+.||+|+||.||+|... ++..||+|.+.... ......++..|+.+++.+ +||||++++++|.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 367899999999999999999642 23579999987542 222346788999999999 8999999999987
Q ss_pred ccccchhheecCcc-------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCC
Q 042958 885 HVRHSLAMILSNNA-------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKN 939 (1075)
Q Consensus 885 ~~~~~l~~~~~~~~-------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 939 (1075)
.....+. +++... ....+++.++.+++.|++.||+|||+. +++||||||+|
T Consensus 95 ~~~~~~l-v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 170 (307)
T cd05098 95 QDGPLYV-IVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 170 (307)
T ss_pred cCCceEE-EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHh
Confidence 6554322 222111 113478999999999999999999999 99999999999
Q ss_pred eeeCCCCCceEeccccccccCCCCCce--eccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccc
Q 042958 940 VLLDFDNEAHVSDFGIAKFLKPDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMS 1016 (1075)
Q Consensus 940 ill~~~~~~kl~DfGla~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~ 1016 (1075)
|+++.++.+||+|||.++......... ....+++.|+|||++.+..++.++||||+|+++|||++ |+.||.......
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~ 250 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence 999999999999999998654322111 11234568999999998889999999999999999998 888886322110
Q ss_pred cchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1017 SSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
........ ..... ....+.++.+++.+||+.+|++|||+.||++.|+
T Consensus 251 -----~~~~~~~~--~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~ 297 (307)
T cd05098 251 -----LFKLLKEG--HRMDK----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297 (307)
T ss_pred -----HHHHHHcC--CCCCC----CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 00011111 11111 1223456889999999999999999999999874
No 244
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=4.3e-31 Score=292.34 Aligned_cols=252 Identities=20% Similarity=0.291 Sum_probs=182.2
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|+||.||+|.. .+|+.||+|++...... ......+.+|++++++++||||+++++++.+....+.+.-
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc-ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 477889999999999999965 47999999998654322 2224567889999999999999999998876544322211
Q ss_pred cCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 895 SNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 895 ~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
... .....+++...+.++.||++||.|||+. +++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (284)
T cd07839 80 YCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCY 156 (284)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCc
Confidence 111 1234578999999999999999999999 99999999999999999999999999998765443334
Q ss_pred eccccccCccCccccccCC-CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-----------hhhhhccCC-C
Q 042958 967 TELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-----------IALDEMLDP-R 1033 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-----------~~~~~~~~~-~ 1033 (1075)
....++..|+|||++.+.. ++.++||||+|+++|||++|+.|+.............. .......+. .
T Consensus 157 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07839 157 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKP 236 (284)
T ss_pred CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccc
Confidence 4456789999999887654 68999999999999999999998642221110000000 000000000 0
Q ss_pred CCCCC------cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1034 LPTPS------CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1034 ~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+... ......+.++.+++.+||+.||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000 001123457889999999999999999999986
No 245
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=1.3e-30 Score=284.38 Aligned_cols=243 Identities=21% Similarity=0.373 Sum_probs=185.3
Q ss_pred hcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.++|++.+.||+|+||.||+|...++..||+|.+... ....+.+.+|++++++++|+||+++++++......+.+.
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e 80 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITE 80 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEE
Confidence 4678899999999999999998777888999988642 223467899999999999999999999887632222211
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.... .....+++.+++.++.|++.|+.|||+. +++||||||+||+++.++.+|++|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 1111 1133468888999999999999999998 999999999999999999999999999976543222
Q ss_pred c-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 965 N-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 965 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
. .....++..|+|||++.+..++.++|+||||+++|++++ |+.||....... ........ ...+. ..
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~~~~~--~~~~~----~~ 226 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----VIRALERG--YRMPR----PE 226 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHhCC--CCCCC----cc
Confidence 1 122345678999999998889999999999999999998 999986432211 01111111 11111 12
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+.++.+++.+||+++|++||++.++.+.|+
T Consensus 227 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 227 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 33456999999999999999999999999885
No 246
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=1.2e-30 Score=284.95 Aligned_cols=236 Identities=28% Similarity=0.453 Sum_probs=184.6
Q ss_pred ceecccCceEEEEEEECC----CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecC
Q 042958 821 HCIGKGGQGSVYKAELAS----GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSN 896 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~ 896 (1075)
+.||+|+||.||+|.... +..||+|.+....... ..+.+.+|++.++.++|+||+++++++...... .++++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~-~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPL-YLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCce-EEEEEe
Confidence 469999999999996653 7899999987653322 467899999999999999999999998774332 222221
Q ss_pred c---------cc---------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 897 N---------AA---------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 897 ~---------~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
. .. ...+++.++++++.|+++|++|||+. +++||||||+||+++.++.+|++|||.+..
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRD 154 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccc
Confidence 1 11 36689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccC-CCC
Q 042958 959 LKPDS--SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLD-PRL 1034 (1075)
Q Consensus 959 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1034 (1075)
..... .......++..|+|||.+.+..++.++||||+|+++|||++ |+.||....... ..+.... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~ 226 (262)
T cd00192 155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE--------VLEYLRKGYRL 226 (262)
T ss_pred cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCCC
Confidence 76543 12233457889999999988889999999999999999999 699987542211 1111111 111
Q ss_pred CCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1035 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.. ....+.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 227 ~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 PK----PEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CC----CccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11 1223457999999999999999999999999875
No 247
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=2.5e-30 Score=289.35 Aligned_cols=241 Identities=27% Similarity=0.395 Sum_probs=184.6
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
..|+..+.||+|+||.||+|... +|+.||+|++...........+++.+|+++++.++||||++++++|......+.++
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999654 68999999986543334444567899999999999999999999998755432221
Q ss_pred ec-Cc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 LS-NN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 ~~-~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
-. .. .....+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++......
T Consensus 95 e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~--- 168 (307)
T cd06607 95 EYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA--- 168 (307)
T ss_pred HhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC---
Confidence 11 10 1234588999999999999999999999 9999999999999999999999999999765432
Q ss_pred eeccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 966 WTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
....+++.|+|||++. ...++.++||||||+++|||++|+.||....... ..........+ .....
T Consensus 169 -~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--------~~~~~~~~~~~--~~~~~ 237 (307)
T cd06607 169 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNDSP--TLSSN 237 (307)
T ss_pred -CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--------HHHHHhcCCCC--CCCch
Confidence 2346788999999874 4568889999999999999999999986432211 00111111111 11122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..+..+.+++.+||+.||++||++.+|++.
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 238 DWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred hhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 345579999999999999999999999863
No 248
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=2.6e-30 Score=285.12 Aligned_cols=244 Identities=27% Similarity=0.447 Sum_probs=185.5
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCC----EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGE----IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
..+|++.+.||+|+||.||+|... +|+ .||+|....... .....++.+|+..+++++||||++++++|.....
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 83 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLSSQV 83 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCce
Confidence 357888899999999999999653 343 589998865432 3345788999999999999999999999987333
Q ss_pred chhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 SLAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 ~l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
.+.+..... .....+++....+++.|+++|++|||+. +++||||||+||+++.++.+||+|||.++...
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 322222111 1133578999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcee--ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCCC
Q 042958 961 PDSSNWT--ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLPT 1036 (1075)
Q Consensus 961 ~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1036 (1075)
....... ...++..|+|||.+....++.++||||||+++||+++ |+.||+.....+ ....+... ..+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 232 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--------IPDLLEKGERLPQ 232 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--------HHHHHhCCCCCCC
Confidence 4332221 1223568999999988889999999999999999998 999987433211 11111111 1222
Q ss_pred CCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1037 PSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1037 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+. .+...+.+++.+||..||.+||++.++++.|+
T Consensus 233 ~~----~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 233 PP----ICTIDVYMVLVKCWMIDAESRPTFKELINEFS 266 (279)
T ss_pred CC----CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 21 23346889999999999999999999998874
No 249
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=8.3e-31 Score=285.44 Aligned_cols=239 Identities=25% Similarity=0.446 Sum_probs=180.8
Q ss_pred ceecccCceEEEEEEECC--C--CEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecC
Q 042958 821 HCIGKGGQGSVYKAELAS--G--EIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSN 896 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~ 896 (1075)
+.||+|++|.||+|.+.+ + ..||||.+...... ...+.+..|+..+++++||||+++++++......+.+.+..
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecC
Confidence 468999999999996643 3 36999998765432 45678999999999999999999999887622111111111
Q ss_pred c--------ccc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce-
Q 042958 897 N--------AAA-KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW- 966 (1075)
Q Consensus 897 ~--------~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~- 966 (1075)
. ... ..+++...+.++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++.+.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 1 011 4678999999999999999999999 99999999999999999999999999998775433221
Q ss_pred --eccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHH
Q 042958 967 --TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQD 1043 (1075)
Q Consensus 967 --~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1075)
....++..|+|||++.+..++.++||||||+++|||++ |+.||......+. ...... .....+.+ ..
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~-~~~~~~~~----~~ 225 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI-----LKKIDK-EGERLERP----EA 225 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHh-cCCcCCCC----cc
Confidence 12456789999999998899999999999999999998 9999864322110 001111 11111111 22
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1044 KLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+..+.+++.+||+.+|++||+++||++.|.
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 226 CPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 3456999999999999999999999999874
No 250
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1e-30 Score=293.33 Aligned_cols=243 Identities=22% Similarity=0.374 Sum_probs=182.4
Q ss_pred hcCCCCCceecccCceEEEEEEEC--------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEee
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 884 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 884 (1075)
.++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ......++..|+++++++ +||||++++++|.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 467888999999999999999642 24579999987532 223356788999999999 6999999999987
Q ss_pred ccccchhheecCcc-------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCC
Q 042958 885 HVRHSLAMILSNNA-------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKN 939 (1075)
Q Consensus 885 ~~~~~l~~~~~~~~-------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 939 (1075)
.....+.+ +++.. ....+++.+..+++.|++.|++|||+. +++||||||+|
T Consensus 89 ~~~~~~lv-~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 89 QEGPLYVI-VEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred cCCceEEE-EecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 65432221 11110 123578999999999999999999999 99999999999
Q ss_pred eeeCCCCCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccc
Q 042958 940 VLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMS 1016 (1075)
Q Consensus 940 ill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~ 1016 (1075)
|+++.++.+|++|||.++........ .....++..|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999999876532221 112234567999999998889999999999999999999 888986432211
Q ss_pred cchhhhhhhhhhccCCC-CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1017 SSSLNLNIALDEMLDPR-LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
......... ...+ ...+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 245 --------~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 291 (314)
T cd05099 245 --------LFKLLREGHRMDKP----SNCTHELYMLMRECWHAVPTQRPTFKQLVEALD 291 (314)
T ss_pred --------HHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111111111 1111 123346889999999999999999999998764
No 251
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=2.2e-30 Score=282.84 Aligned_cols=242 Identities=24% Similarity=0.464 Sum_probs=187.0
Q ss_pred HhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
..++|++.+.||+|+||.||+|..++++.||||.+..... ..+++.+|+.++++++|+||+++++++...... .+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~~ 78 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI-YI 78 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCce-EE
Confidence 3578899999999999999999888788999999874322 246789999999999999999999988764332 22
Q ss_pred eecCc-----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 893 ILSNN-----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 893 ~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+++.. .....+++.++..++.|++.|++|||+. +++|+||||+||+++.++.+|++|||.+.....
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 22111 1124578999999999999999999999 999999999999999999999999999987653
Q ss_pred CCC-ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccC-CCCCCCC
Q 042958 962 DSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLD-PRLPTPS 1038 (1075)
Q Consensus 962 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1038 (1075)
... ......++..|+|||.+.+..++.++||||+|+++||+++ |+.||...... .....+.. ...+.+
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~- 226 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--------EVLEQVERGYRMPRP- 226 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCC-
Confidence 211 1112234568999999998889999999999999999998 99998532211 11111111 111111
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+|++.+|++||+++|+.+.|+
T Consensus 227 ---~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 227 ---PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred ---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 122446999999999999999999999999886
No 252
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=2.3e-31 Score=304.41 Aligned_cols=242 Identities=23% Similarity=0.276 Sum_probs=179.9
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|.. .+++.||+|++...........+.+..|+.++..++||+|+++++++.+.+..+. +
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l-v 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYL-I 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE-E
Confidence 4688889999999999999965 4689999999865322233345678899999999999999999998877654322 2
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 2221 1234578888999999999999999999 999999999999999999999999999875432110
Q ss_pred -----------------------------------ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCC
Q 042958 965 -----------------------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 1009 (1075)
Q Consensus 965 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~ 1009 (1075)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 011346999999999999999999999999999999999999999
Q ss_pred CccCccccchhhhhhhhhhccC--CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCC---HHHHHh
Q 042958 1010 DFISSMSSSSLNLNIALDEMLD--PRLPTPSCIVQDKLISIVEVAISCLDENPESRPT---MPKVSQ 1071 (1075)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 1071 (1075)
....... ....+.. .....+.. ...+.++.+++.+++. ||++|++ ++|+++
T Consensus 237 ~~~~~~~--------~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 237 CSETPQE--------TYRKVMNWKETLVFPPE--VPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCHHH--------HHHHHHcCCCceecCCC--CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 7433211 1111111 11111111 1123357788888764 9999995 566653
No 253
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=1.9e-30 Score=284.58 Aligned_cols=241 Identities=24% Similarity=0.365 Sum_probs=172.4
Q ss_pred ceecccCceEEEEEEEC---CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc
Q 042958 821 HCIGKGGQGSVYKAELA---SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN 897 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~ 897 (1075)
+.||+|+||.||+|... ++..+|+|.+..... ......+.+|+.++++++||||+++++++.+....+ +++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYL-LVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcE-EEEECC
Confidence 35899999999999654 346799998865432 223457889999999999999999999987654432 222221
Q ss_pred cc--------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 898 AA--------------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 898 ~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
.. ....++..+.+++.|+++|++|||+. +++||||||+||+++.++++|++|||.++......
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence 11 12345667788999999999999999 99999999999999999999999999997644332
Q ss_pred Cc--eeccccccCccCccccccC-------CCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCC
Q 042958 964 SN--WTELAGTYGYVAPELAYTM-------KVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPR 1033 (1075)
Q Consensus 964 ~~--~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1075)
.. .....++..|+|||++.+. .++.++||||||+++|||++ |+.||......+.... .... ...+
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~----~~~~-~~~~ 229 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY----TVRE-QQLK 229 (269)
T ss_pred eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH----Hhhc-ccCC
Confidence 21 1234567889999988642 35789999999999999996 9999964322111000 0000 1111
Q ss_pred CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1034 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+.+. ........+.+++..|| .+|++|||++||++.|+
T Consensus 230 ~~~~~-~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPR-LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCc-cCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11111 11122345888999999 68999999999999875
No 254
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=2e-30 Score=282.16 Aligned_cols=240 Identities=25% Similarity=0.419 Sum_probs=184.0
Q ss_pred cCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.+|++.+.||+|+||.||+|...+++.+|+|.+...... ..++.+|++++++++|||++++++++......+.+ +
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v-~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV-F 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE-E
Confidence 467788999999999999998777889999998654322 35788999999999999999999998765543222 2
Q ss_pred cCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 SNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 ~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+.. .....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 211 1123578999999999999999999999 999999999999999999999999999986543321
Q ss_pred c-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCC-CCCCCCcCc
Q 042958 965 N-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDP-RLPTPSCIV 1041 (1075)
Q Consensus 965 ~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 1041 (1075)
. .....++.+|+|||+..+..++.++||||+|+++|||++ |+.||...... ...+..... +...+.
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~--- 224 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--------EVVETINAGFRLYKPR--- 224 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHhCCCCCCCCC---
Confidence 1 122335678999999998889999999999999999998 99998632211 111111111 111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+..+.+++.+||+.+|++|||++||++.|.
T Consensus 225 -~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 -LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred -CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12346999999999999999999999999874
No 255
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=2.8e-30 Score=282.64 Aligned_cols=243 Identities=24% Similarity=0.375 Sum_probs=184.6
Q ss_pred CCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCC---chhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 816 DFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPG---EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
+|+..+.||+|+||+||+|...+|+.+|||.+...... .....+.+.+|++++++++|+||+++++++.+....+.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47888999999999999998888999999988653221 122345688999999999999999999999776443222
Q ss_pred eecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++... ....+++.....++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 -~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 -MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred -EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 22111 124578888899999999999999999 99999999999999999999999999987653211
Q ss_pred ------CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 964 ------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 964 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
.......|+..|+|||++.+..++.++||||+|+++|||++|+.||...+.... .. ...... ...+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~----~~-~~~~~~-~~~~~- 229 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA----MF-YIGAHR-GLMPR- 229 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH----HH-Hhhhcc-CCCCC-
Confidence 112335688999999999998899999999999999999999999964322110 00 000000 01111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
........+.+++.+||+.+|++||++.|+++
T Consensus 230 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 230 --LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred --CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11223456899999999999999999999975
No 256
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=5.7e-31 Score=291.34 Aligned_cols=252 Identities=21% Similarity=0.285 Sum_probs=182.8
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|++|.||+|.. .+|+.||||++...... ....+.+.+|++++++++||||+++++++.+....+..+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 478889999999999999965 47899999998754322 2234678899999999999999999999876554322221
Q ss_pred cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
... .....+++.....++.|+++|++|||+. +++||||+|+||+++.++.+|++|||.+.........
T Consensus 80 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 80 FLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred ccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 111 1234578999999999999999999999 9999999999999999999999999999876544333
Q ss_pred eeccccccCccCccccccCC-CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------------hhhhhc--
Q 042958 966 WTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------------IALDEM-- 1029 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------------~~~~~~-- 1029 (1075)
.....+++.|+|||+..+.. ++.++||||||+++|||+||+.||.............. ......
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07860 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP 236 (284)
T ss_pred cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHh
Confidence 34456788999999887654 58899999999999999999999864322110000000 000000
Q ss_pred cCCCCCCC--CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1030 LDPRLPTP--SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1030 ~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+..... ..........+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000000 0000112346789999999999999999999986
No 257
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=2.5e-31 Score=300.43 Aligned_cols=234 Identities=22% Similarity=0.227 Sum_probs=172.3
Q ss_pred ecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC---CcCceeeEEEEeeccccchhheecCcc
Q 042958 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI---RHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 823 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
||+|+||.||+|.. .+|+.||||++.............+..|..++... +||||+++++++......+.+ +++..
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv-~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLV-TDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEE-EcCCC
Confidence 69999999999965 46999999998643222222234455677776655 699999999988776543322 22211
Q ss_pred ---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 899 ---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 899 ---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
....+++.+...++.||++|++|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 156 (330)
T cd05586 80 GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTF 156 (330)
T ss_pred CChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCc
Confidence 234578899999999999999999999 99999999999999999999999999997654433344456
Q ss_pred ccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHH
Q 042958 970 AGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1048 (1075)
.||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+.......+.. .....+
T Consensus 157 ~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~~~~---~~~~~~ 225 (330)
T cd05586 157 CGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--------QQMYRNIAFGKVRFPKN---VLSDEG 225 (330)
T ss_pred cCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--------HHHHHHHHcCCCCCCCc---cCCHHH
Confidence 799999999998764 478999999999999999999999864221 11112222222211111 123458
Q ss_pred HHHHHHccCCCCCCCC----CHHHHHh
Q 042958 1049 VEVAISCLDENPESRP----TMPKVSQ 1071 (1075)
Q Consensus 1049 ~~li~~cl~~dP~~RP----s~~evl~ 1071 (1075)
.+++.+||++||++|| ++.|+++
T Consensus 226 ~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 226 RQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 8999999999999998 5666654
No 258
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=2.9e-30 Score=283.34 Aligned_cols=244 Identities=25% Similarity=0.411 Sum_probs=185.3
Q ss_pred hcCCCCCceecccCceEEEEEEECC----CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELAS----GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
.++|++.+.||+|+||.||+|...+ ...||||...... .....+.+.+|+.++++++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcE
Confidence 3568888999999999999996543 3468999886542 233457899999999999999999999998765443
Q ss_pred hhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 890 LAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 890 l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+.+..... .....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++....
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 33222111 1123578999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCc-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccC-CCCCCCC
Q 042958 962 DSSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLD-PRLPTPS 1038 (1075)
Q Consensus 962 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1038 (1075)
.... .....++..|+|||.+....++.++||||||+++||+++ |+.||....... ....+.. .+.+.+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~- 230 (270)
T cd05056 160 ESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--------VIGRIENGERLPMP- 230 (270)
T ss_pred ccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHcCCcCCCC-
Confidence 3221 112234568999999988889999999999999999996 999986433211 1111111 111221
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+..+.+++.+|+..+|.+|||+.|+++.|+
T Consensus 231 ---~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 231 ---PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred ---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 223456999999999999999999999998874
No 259
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=7.9e-31 Score=289.82 Aligned_cols=249 Identities=23% Similarity=0.361 Sum_probs=186.6
Q ss_pred cHHHHHHHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEe
Q 042958 806 VYEEIIRATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFC 883 (1075)
Q Consensus 806 ~~~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 883 (1075)
...++..+...|++.+.||+|+||.||+|.. .+++.||+|++.... ....++..|+.+++++ +||||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 4455556678899999999999999999965 568999999875431 2246788999999999 799999999988
Q ss_pred ecc-----ccchhheecCcc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCC
Q 042958 884 SHV-----RHSLAMILSNNA-----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE 947 (1075)
Q Consensus 884 ~~~-----~~~l~~~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 947 (1075)
... ...++++++... ....+++..+..++.|+++|++|||+. +++||||+|+||+++.++.
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 532 122222222211 123467888899999999999999999 9999999999999999999
Q ss_pred ceEeccccccccCCCCCceeccccccCccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh
Q 042958 948 AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL 1022 (1075)
Q Consensus 948 ~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~ 1022 (1075)
++|+|||++..............|+..|+|||.+. +..++.++||||+|+++|||++|+.||........
T Consensus 160 ~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~----- 234 (282)
T cd06636 160 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA----- 234 (282)
T ss_pred EEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-----
Confidence 99999999886543333334467899999999875 34578899999999999999999999864322110
Q ss_pred hhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1023 NIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1023 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
........ .+.......+..+.+++.+||+.||.+|||+.|+++
T Consensus 235 ---~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 235 ---LFLIPRNP--PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ---hhhHhhCC--CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00111111 011111234457999999999999999999999976
No 260
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=2e-30 Score=285.63 Aligned_cols=241 Identities=24% Similarity=0.376 Sum_probs=187.5
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
..|+..+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.++++++||||+++++++......+.+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv- 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII- 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE-
Confidence 4577778899999999999965 4689999999865322 23357889999999999999999999998765443222
Q ss_pred ecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 LSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 ~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
++... ....+++.+...++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.........
T Consensus 81 ~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 81 MEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred EecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCccc
Confidence 22111 134578888899999999999999999 9999999999999999999999999999876544333
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
.....++..|+|||++.+..++.++||||||+++|||++|+.||........ .... .... +.......+
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------~~~~-~~~~--~~~~~~~~~ 226 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--------LFLI-PKNN--PPTLTGEFS 226 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--------hhhh-hcCC--CCCCchhhh
Confidence 3445678899999999988899999999999999999999999864322110 0111 1111 112234566
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..+.+++.+||+.+|++||+++|+++.
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 227 KPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 789999999999999999999999763
No 261
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=2e-30 Score=287.90 Aligned_cols=253 Identities=19% Similarity=0.242 Sum_probs=182.6
Q ss_pred HhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
++++|++.+.||+|+||.||+|.. .+|+.||+|++....... ....+.+|+.+++.++|+||+++++++......+.
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG--VPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC--CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 457899999999999999999954 578999999986543222 23467789999999999999999999876544322
Q ss_pred heecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 892 MILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 892 ~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+++.. .....+.+.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 -v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 81 -VFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred -EEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 22111 1123467888889999999999999999 9999999999999999999999999999865443
Q ss_pred CCceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh------------------h
Q 042958 963 SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL------------------N 1023 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~------------------~ 1023 (1075)
........++..|+|||++.+. .++.++||||+|+++|||++|+.||+........-... .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 3333445678999999998754 57889999999999999999999997443210000000 0
Q ss_pred hhhhhccCCCCCCCC---cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1024 IALDEMLDPRLPTPS---CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1024 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...........+... .........+.+++.+|++.||++|||++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000000 000012346889999999999999999999875
No 262
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=2.1e-30 Score=286.95 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=185.7
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-chhh
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-SLAM 892 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~l~~ 892 (1075)
++|+..+.||.|++|.||+|.. .+++.||+|.+..... .....++.+|++++++++||||++++++|..... .+.+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 3577889999999999999966 4689999999875422 2345778999999999999999999998865432 2222
Q ss_pred eecCcc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 893 ILSNNA-------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 893 ~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
+++... ....+++.....++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 222111 134467888889999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCc
Q 042958 960 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSC 1039 (1075)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1075)
..... ....++..|+|||.+.+..++.++||||+|+++|||++|+.||+.....................+.++....
T Consensus 156 ~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd06621 156 VNSLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG 233 (287)
T ss_pred ccccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCC
Confidence 43221 2345788999999999889999999999999999999999999754221111111111111111111111111
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1040 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.....+..+.+++.+||+.+|.+|||+.||++
T Consensus 234 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 11223557899999999999999999999986
No 263
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=7.5e-31 Score=290.22 Aligned_cols=249 Identities=24% Similarity=0.365 Sum_probs=187.6
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||+||+|.. .+|+.||+|++.... .....+.+.+|+++++.++||||+++++++......+..
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv- 81 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC- 81 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE-
Confidence 5677889999999999999955 468999999876532 233457899999999999999999999999876543222
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+++.. ....+++.....++.+++.|+.|||+.. +++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 22111 1345788999999999999999999742 89999999999999999999999999987543221
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccch---hhhhhhhhhccCCCCCCCCcCc
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSS---LNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
.....|+..|+|||++.+..++.++|||||||++||+++|+.||+......... .........+.....+.. ..
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 235 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL--PS 235 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCC--Cc
Confidence 224578999999999988889999999999999999999999997543321100 001111222222111111 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...+..+.+++.+||++||++|||++||++.
T Consensus 236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred hhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 2244579999999999999999999999975
No 264
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=3.1e-30 Score=288.55 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=184.1
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|.. .+++.||+|.+.... ......++.+|++++++++||||++++++|...+..+. +
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l-v 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISI-C 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEE-E
Confidence 4688999999999999999965 468899999886532 23345678899999999999999999999876554332 2
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+++.. ....+++.....++.|+++||+|||+.+ +++||||||+||+++.++.+||+|||++......
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 22211 2345788888999999999999999732 8999999999999999999999999998765432
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh----------------------
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL---------------------- 1022 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~---------------------- 1022 (1075)
......++..|+|||++.+..++.++||||||+++|||++|+.||.............
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS 233 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence 2234578899999999988889999999999999999999999986322111000000
Q ss_pred ------hhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1023 ------NIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1023 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
....+....... +.........++.+++.+||+.||++|||++||++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 234 PRPMAIFELLDYIVNEPP--PKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cchhhHHHHHHHHhcCCC--ccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000000 000011234568999999999999999999999864
No 265
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=5.4e-31 Score=290.27 Aligned_cols=239 Identities=26% Similarity=0.384 Sum_probs=184.1
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|++++++++||||+++++++......+.+ +
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv-~ 81 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII-M 81 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEE-E
Confidence 455667899999999999954 468899999986442 223356789999999999999999999988765443222 2
Q ss_pred cCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 895 SNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 895 ~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
+... ....+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++++|||++..........
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06642 82 EYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred EccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcchhh
Confidence 1111 234578899999999999999999999 99999999999999999999999999998765443333
Q ss_pred eccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 967 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
....++..|+|||++.+..++.++||||||+++|||++|+.|+........ .........+. .....+.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------~~~~~~~~~~~---~~~~~~~ 227 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--------LFLIPKNSPPT---LEGQYSK 227 (277)
T ss_pred hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--------HhhhhcCCCCC---CCcccCH
Confidence 345688899999999998899999999999999999999999863322110 01111111111 1123445
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1047 SIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+.+++.+||+.+|++||+|.||++
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 228 PFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHH
Confidence 6899999999999999999999986
No 266
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=1.8e-30 Score=286.73 Aligned_cols=242 Identities=24% Similarity=0.382 Sum_probs=185.1
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
.++|++.+.||+|+||.||+|... +++.||+|++... .....+.+..|++++++++||||+++++++......+ +
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLW-I 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE-E
Confidence 356888899999999999999664 6899999998643 3334567899999999999999999999987655432 2
Q ss_pred eecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 893 ILSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 893 ~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+++... ....+++.....++.|++.|+.|||+. +|+|+||||+||+++.++.++|+|||.+......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 222111 134588999999999999999999999 9999999999999999999999999998765544
Q ss_pred CCceeccccccCccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 963 SSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
........+++.|+|||++. +..++.++||||+|+++|||++|+.||........ .........+.+..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~- 230 (280)
T cd06611 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV-----LLKILKSEPPTLDQ- 230 (280)
T ss_pred ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH-----HHHHhcCCCCCcCC-
Confidence 33344557899999999874 34567899999999999999999999864322110 00111111111111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+..+.+++.+||+.+|.+||++.+|++
T Consensus 231 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 231 ---PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ---cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 1223446899999999999999999999986
No 267
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=1.9e-30 Score=285.39 Aligned_cols=242 Identities=26% Similarity=0.407 Sum_probs=181.3
Q ss_pred CCCCceecccCceEEEEEEEC----CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc---
Q 042958 817 FDDEHCIGKGGQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS--- 889 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 889 (1075)
|++.+.||+|+||.||+|... +++.||||++...... ....+++.+|++++++++||||+++++++......
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS-SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC-hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 567789999999999999643 4688999998754322 23356788999999999999999999988653211
Q ss_pred -hhh-eecCc---------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEec
Q 042958 890 -LAM-ILSNN---------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSD 952 (1075)
Q Consensus 890 -l~~-~~~~~---------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 952 (1075)
..+ ++... .....+++....+++.|++.|++|||+. +|+||||||+||+++.++.+|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 111 11100 0112468888999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhc
Q 042958 953 FGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEM 1029 (1075)
Q Consensus 953 fGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1029 (1075)
||.++....... ......+++.|++||.+.+..++.++||||||+++|||++ |+.||....... ....+
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~--------~~~~~ 228 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE--------IYNYL 228 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH--------HHHHH
Confidence 999987643321 1122345678999999998889999999999999999999 888886332211 11111
Q ss_pred cCC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1030 LDP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1030 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
... ....+ ...+..+.+++.+||+.+|++||++.|+++.|+
T Consensus 229 ~~~~~~~~~----~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~ 270 (273)
T cd05074 229 IKGNRLKQP----PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLE 270 (273)
T ss_pred HcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 11111 123346999999999999999999999999875
No 268
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.97 E-value=2.5e-30 Score=286.18 Aligned_cols=251 Identities=25% Similarity=0.410 Sum_probs=186.5
Q ss_pred cCCCCCceecccCceEEEEEEEC-----CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
+.|+..+.||+|+||.||+|.+. +++.||||++...... ...++|.+|+++++.++||||+++++++......
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 46778899999999999999653 4789999998754332 3457899999999999999999999988763321
Q ss_pred -hhheecCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 890 -LAMILSNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 890 -l~~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
...+++.. .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+..
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 12222111 1122488999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcee---ccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccc------hhhhhhhhhhc
Q 042958 959 LKPDSSNWT---ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSS------SLNLNIALDEM 1029 (1075)
Q Consensus 959 ~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~------~~~~~~~~~~~ 1029 (1075)
......... ...++..|+|||+..+..++.++||||||+++|||++|+.|+......... .........+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence 764322211 224456799999998889999999999999999999999997643221100 00001111111
Q ss_pred cC--CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1030 LD--PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1030 ~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.. .+.+.+ ..++.++.+++.+||+.+|++||||.||+++|+
T Consensus 239 ~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05038 239 LKEGERLPRP----PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281 (284)
T ss_pred HHcCCcCCCC----ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHh
Confidence 11 111211 223356999999999999999999999999885
No 269
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=2.7e-30 Score=280.35 Aligned_cols=238 Identities=26% Similarity=0.405 Sum_probs=181.2
Q ss_pred ceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc---
Q 042958 821 HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN--- 897 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~--- 897 (1075)
++||+|+||.||+|...+++.||+|++...... ...+.+..|+++++++.||||+++++++......+.++....
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 469999999999997766999999998764332 345789999999999999999999999877654332221110
Q ss_pred ------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce--ecc
Q 042958 898 ------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW--TEL 969 (1075)
Q Consensus 898 ------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~--~~~ 969 (1075)
.....+++.....++.+++.|++|||+. +++||||||+||+++.++.+||+|||.+.......... ...
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 1133578888899999999999999999 99999999999999999999999999998654221111 112
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISI 1048 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1048 (1075)
..+..|+|||.+.+..++.++||||+|+++|||++ |..||....... ........ ...+. ....+..+
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~-----~~~~~~~~--~~~~~----~~~~~~~~ 224 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ-----TRERIESG--YRMPA----PQLCPEEI 224 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH-----HHHHHhcC--CCCCC----CccCCHHH
Confidence 33567999999988889999999999999999999 888885432211 11111111 11111 12334579
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1049 VEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1049 ~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+++.+||+.+|++|||+.||++.|+
T Consensus 225 ~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 225 YRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHhccChhhCcCHHHHHHHhh
Confidence 99999999999999999999999886
No 270
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=2.8e-30 Score=283.29 Aligned_cols=243 Identities=27% Similarity=0.485 Sum_probs=183.7
Q ss_pred cCCCCCceecccCceEEEEEEEC-CC---CEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccch
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SG---EIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l 890 (1075)
.+|++.+.||+|+||.||+|... ++ ..||||.+.... .....++|..|+.+++.++||||+++++++......+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 34778899999999999999654 33 369999986542 3344678999999999999999999999987655432
Q ss_pred hheecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 891 AMILSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 891 ~~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
.+ ++... ....+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+..+.
T Consensus 82 lv-~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 82 II-TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EE-EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccc
Confidence 22 21111 134578999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCc--eec-cc--cccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCC
Q 042958 961 PDSSN--WTE-LA--GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRL 1034 (1075)
Q Consensus 961 ~~~~~--~~~-~~--gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1075)
..... ... .. .+..|+|||++.+..++.++||||+|+++||+++ |..||....... ....... +...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-----~~~~i~~--~~~~ 230 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-----VINAIEQ--DYRL 230 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-----HHHHHHc--CCcC
Confidence 43221 111 11 2357999999998899999999999999999986 999986432211 1111111 1122
Q ss_pred CCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1035 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+.+ .+.+..+.+++.+||+++|.+||++++|++.|+
T Consensus 231 ~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 231 PPP----MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred CCc----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 222 233456899999999999999999999999875
No 271
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=1.1e-30 Score=289.72 Aligned_cols=240 Identities=25% Similarity=0.351 Sum_probs=183.4
Q ss_pred CCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
|.....||+|+||.||++.. .++..||||++.... ....+.+.+|+.+++.++||||+++++++...+..+.. ++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv-~e 99 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVV-ME 99 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEE-Ee
Confidence 33346799999999999965 468999999986432 23356788999999999999999999988765443222 22
Q ss_pred Ccc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee
Q 042958 896 NNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT 967 (1075)
Q Consensus 896 ~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 967 (1075)
... ....+++.+...++.||+.|++|||+. +|+||||||+||+++.++.++|+|||++...........
T Consensus 100 ~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 176 (292)
T cd06658 100 FLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 176 (292)
T ss_pred CCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCc
Confidence 111 123578899999999999999999999 999999999999999999999999999976654433334
Q ss_pred ccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHH
Q 042958 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1075)
...|+..|+|||+..+..++.++||||||+++|||++|+.||....... .............+. .......
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~~~ 247 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-----AMRRIRDNLPPRVKD----SHKVSSV 247 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhcCCCcccc----ccccCHH
Confidence 4578999999999988889999999999999999999999986432211 011111122222221 1123446
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1048 IVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1048 l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
+.+++.+||..||.+|||++|+++.
T Consensus 248 ~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 248 LRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHHHccCChhHCcCHHHHhhC
Confidence 8899999999999999999999863
No 272
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.4e-30 Score=293.99 Aligned_cols=249 Identities=19% Similarity=0.247 Sum_probs=176.3
Q ss_pred CCceeccc--CceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee-
Q 042958 819 DEHCIGKG--GQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL- 894 (1075)
Q Consensus 819 ~~~~lG~G--~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~- 894 (1075)
+.++||+| +|++||++.. .+|+.||+|++...... ....+.+.+|+++++.++||||++++++|...+..+.++.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 35679999 6889999954 57999999998754322 2335677889999999999999999999977654432221
Q ss_pred cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
... .....+++..+++++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+.........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 111 0123478999999999999999999999 9999999999999999999999999876543221110
Q ss_pred -------eeccccccCccCcccccc--CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhcc------
Q 042958 966 -------WTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEML------ 1030 (1075)
Q Consensus 966 -------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 1030 (1075)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||.....................
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 112346778999999876 45889999999999999999999999743221100000000000000
Q ss_pred -------------CCCC----------C-----CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1031 -------------DPRL----------P-----TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1031 -------------~~~~----------~-----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+... + ............+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0000 0 000011233457899999999999999999999986
No 273
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=2.9e-30 Score=282.84 Aligned_cols=246 Identities=26% Similarity=0.383 Sum_probs=186.6
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||.|+||.||+|.. .++..||+|++....... ..+.+.+|++.++.++|+||+++++.+...+..+..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 4788999999999999999965 468899999986543222 4578999999999999999999999887655433222
Q ss_pred ecCc-----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 894 LSNN-----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 894 ~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
.... .....+++.....++.|++.|++|||+. +++||||+|+||++++++.++++|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 1110 1124578899999999999999999999 9999999999999999999999999999876654
Q ss_pred CCc----eeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 963 SSN----WTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 963 ~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
... .....|+..|+|||++... .++.++||||||+++|||++|+.||.......... .... ...+.....
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~ 230 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLM----LTLQ-NDPPSLETG 230 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHH----HHhc-CCCCCcCCc
Confidence 322 1334688999999998776 78999999999999999999999997443221100 0000 011111111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
......+..+.+++.+||+.||++||+++|+++
T Consensus 231 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 231 -ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 001234567899999999999999999999986
No 274
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=1.4e-30 Score=283.02 Aligned_cols=237 Identities=26% Similarity=0.437 Sum_probs=182.2
Q ss_pred cCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.+|++.+.||+|+||.||+|.. +++.||+|.+.... ..+.+.+|+.++++++|||++++++++......+.+..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEEC
Confidence 4688899999999999999975 58889999986431 24678899999999999999999999876543322221
Q ss_pred cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
... .....+++..+.+++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--- 153 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--- 153 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence 111 1123478889999999999999999998 9999999999999999999999999998764322
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......+..|+|||++.+..++.++||||||+++|||++ |+.||....... ........ .+... ....
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~--~~~~~----~~~~ 222 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE-----VKECVEKG--YRMEP----PEGC 222 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH-----HHHHHhCC--CCCCC----CCcC
Confidence 122334578999999988889999999999999999997 999986432211 11111111 11111 1233
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+..+.+++.+||+.+|++||+++++++.|+
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 456899999999999999999999999875
No 275
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=7.3e-31 Score=290.82 Aligned_cols=252 Identities=22% Similarity=0.347 Sum_probs=185.5
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|..+ +++.||+|++....... ...+.+.+|+++++.++||||+++++++......+.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv- 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLV- 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEE-
Confidence 46888899999999999999765 68999999986543322 3456788999999999999999999998765443222
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.++..++.||++|++|||+. +++||||+|+||++++++.++++|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 2111 1123478999999999999999999999 999999999999999999999999999987655444
Q ss_pred ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh------hhhh----------h
Q 042958 965 NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL------NIAL----------D 1027 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~------~~~~----------~ 1027 (1075)
......++..|+|||+..+ ..++.++||||||+++|||++|+.||......+...... .... .
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 4445568899999998875 347889999999999999999999986432211000000 0000 0
Q ss_pred hccCCCCCCCC---cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 EMLDPRLPTPS---CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 ~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+..+...... ......+..+.+++.+||+.+|++||+++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00011110000 001123456999999999999999999999985
No 276
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=8.7e-31 Score=291.18 Aligned_cols=237 Identities=24% Similarity=0.367 Sum_probs=181.4
Q ss_pred CCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc
Q 042958 819 DEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN 897 (1075)
Q Consensus 819 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~ 897 (1075)
....||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++......+.. ++..
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv-~e~~ 100 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVL-MEFL 100 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEE-EecC
Confidence 345799999999999955 4789999999864322 2346788999999999999999999988765443222 2211
Q ss_pred c--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 898 A--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 898 ~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
. ....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.............
T Consensus 101 ~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~ 177 (297)
T cd06659 101 QGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL 177 (297)
T ss_pred CCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccce
Confidence 1 134578999999999999999999999 99999999999999999999999999997665444334456
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.|+..|+|||++.+..++.++||||||+++|||++|+.||........ ............. ........+.
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~l~ 248 (297)
T cd06659 178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-----MKRLRDSPPPKLK----NAHKISPVLR 248 (297)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHhccCCCCcc----ccCCCCHHHH
Confidence 789999999999988899999999999999999999999863322110 0011111111111 1112334589
Q ss_pred HHHHHccCCCCCCCCCHHHHHh
Q 042958 1050 EVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+++.+||+.+|++||+++|+++
T Consensus 249 ~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 249 DFLERMLTREPQERATAQELLD 270 (297)
T ss_pred HHHHHHhcCCcccCcCHHHHhh
Confidence 9999999999999999999987
No 277
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=1.9e-30 Score=285.66 Aligned_cols=244 Identities=27% Similarity=0.389 Sum_probs=186.3
Q ss_pred HHhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeecccc-
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRH- 888 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~- 888 (1075)
.++++|++.+.||+|+||.||+|... +++.||+|++.... ...+++.+|+.+++++ +|+||+++++++.....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 35689999999999999999999664 68899999986532 1246789999999999 79999999999876442
Q ss_pred ----chhheecCcc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEe
Q 042958 889 ----SLAMILSNNA-------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVS 951 (1075)
Q Consensus 889 ----~l~~~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 951 (1075)
.+.++++... ....+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.+|++
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEEC
Confidence 1222222211 135678899999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCceeccccccCccCcccccc-----CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhh
Q 042958 952 DFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIAL 1026 (1075)
Q Consensus 952 DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 1026 (1075)
|||.+..............|+..|+|||++.. ..++.++||||+|+++|||++|+.||....... ..
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~ 227 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--------AL 227 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--------HH
Confidence 99999876544444445678999999998753 346789999999999999999999986332211 11
Q ss_pred hhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1027 DEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+..... ............+.+++.+||..||++|||++|+++
T Consensus 228 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 228 FKIPRNPP-PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHhhccCC-CCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111111 111111224457899999999999999999999986
No 278
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1.9e-30 Score=293.77 Aligned_cols=243 Identities=22% Similarity=0.360 Sum_probs=182.5
Q ss_pred hcCCCCCceecccCceEEEEEEEC--------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEee
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA--------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 884 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 884 (1075)
..+|++.+.||+|+||.||+|... .+..||+|.+.... .....+++.+|+++++++ +||||++++++|.
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 456889999999999999999542 12368999887432 223357889999999999 8999999999987
Q ss_pred ccccchhheecCcc-------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCC
Q 042958 885 HVRHSLAMILSNNA-------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKN 939 (1075)
Q Consensus 885 ~~~~~l~~~~~~~~-------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 939 (1075)
.....+.+ ++... ....++|.++.+++.|++.|++|||+. +++||||||+|
T Consensus 89 ~~~~~~lv-~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 164 (334)
T cd05100 89 QDGPLYVL-VEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARN 164 (334)
T ss_pred cCCceEEE-EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccce
Confidence 65433221 11110 123478899999999999999999999 99999999999
Q ss_pred eeeCCCCCceEeccccccccCCCCCc--eeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccc
Q 042958 940 VLLDFDNEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMS 1016 (1075)
Q Consensus 940 ill~~~~~~kl~DfGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~ 1016 (1075)
|+++.++.+||+|||.++........ .....++..|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~- 243 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE- 243 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 99999999999999999866533221 112234567999999999899999999999999999998 88888643211
Q ss_pred cchhhhhhhhhhccCCC-CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1017 SSSLNLNIALDEMLDPR-LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.....+.... ...+ ...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 244 -------~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~ 291 (334)
T cd05100 244 -------ELFKLLKEGHRMDKP----ANCTHELYMIMRECWHAVPSQRPTFKQLVEDLD 291 (334)
T ss_pred -------HHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 1111111111 1111 123346899999999999999999999998874
No 279
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.3e-30 Score=273.78 Aligned_cols=244 Identities=20% Similarity=0.253 Sum_probs=191.4
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccch-hh
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSL-AM 892 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l-~~ 892 (1075)
+.|+..+.||.|.-|+||.++.+ ++..+|+|++.+..........+...|.+||+.+.||.++.+|+.++...... +|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 44566788999999999999776 45899999998766555556677889999999999999999999988765432 22
Q ss_pred eecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC--
Q 042958 893 ILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP-- 961 (1075)
Q Consensus 893 ~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~-- 961 (1075)
.+... ..+..++....+-+|..|+-||+|||.. |||+|||||+|||+.++|++-++||.++.....
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 22221 2245678888899999999999999999 999999999999999999999999999753321
Q ss_pred -------------------------------CCC-----------------------ceeccccccCccCccccccCCCC
Q 042958 962 -------------------------------DSS-----------------------NWTELAGTYGYVAPELAYTMKVT 987 (1075)
Q Consensus 962 -------------------------------~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~ 987 (1075)
... .....+||-.|.|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 000 01124689999999999999999
Q ss_pred cccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCC--
Q 042958 988 EKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT-- 1065 (1075)
Q Consensus 988 ~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-- 1065 (1075)
.++|+|+|||++|||+.|..||.+... ...+..++...+..+.. ...+..+.++|++.+.+||.+|.-
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~--------~~Tl~NIv~~~l~Fp~~--~~vs~~akDLIr~LLvKdP~kRlg~~ 383 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNN--------KETLRNIVGQPLKFPEE--PEVSSAAKDLIRKLLVKDPSKRLGSK 383 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCc--------hhhHHHHhcCCCcCCCC--CcchhHHHHHHHHHhccChhhhhccc
Confidence 999999999999999999999975443 23344444443333321 245567999999999999999998
Q ss_pred --HHHHHh
Q 042958 1066 --MPKVSQ 1071 (1075)
Q Consensus 1066 --~~evl~ 1071 (1075)
++||.+
T Consensus 384 rGA~eIK~ 391 (459)
T KOG0610|consen 384 RGAAEIKR 391 (459)
T ss_pred cchHHhhc
Confidence 777754
No 280
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=2.3e-30 Score=283.91 Aligned_cols=240 Identities=25% Similarity=0.322 Sum_probs=171.0
Q ss_pred eecccCceEEEEEEECC---CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc
Q 042958 822 CIGKGGQGSVYKAELAS---GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 822 ~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
.||+|+||.||+|...+ ...+|+|.+.... .......+.+|++.++.++||||+++++++......+. +++...
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~l-v~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLL-VLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEE-EEEeCC
Confidence 58999999999996543 3578888876432 23335678899999999999999999999876554322 221111
Q ss_pred --------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 899 --------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 899 --------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.....++.....++.|++.|++|||+. +|+||||||+||+++.++++||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchh
Confidence 012245677789999999999999999 999999999999999999999999999876443221
Q ss_pred c--eeccccccCccCcccccc-------CCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCC
Q 042958 965 N--WTELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRL 1034 (1075)
Q Consensus 965 ~--~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1075)
. .....+++.|+|||+... ..++.++||||+|+++|||++ |+.||........ ...........+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-----~~~~~~~~~~~~ 230 (269)
T cd05042 156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV-----LKQVVREQDIKL 230 (269)
T ss_pred eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH-----HHHHhhccCccC
Confidence 1 123345678999998643 356789999999999999999 7888864322110 000011111122
Q ss_pred CCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1035 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+.+ ......+..+.+++..|| .||++|||++||++.|.
T Consensus 231 ~~~-~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKP-QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCC-cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 221 112234456788999999 59999999999999863
No 281
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=1.4e-30 Score=293.98 Aligned_cols=244 Identities=21% Similarity=0.257 Sum_probs=178.9
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||++... +++.||+|++...........+.+.+|+.+++.++|+||+++++++......+ ++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~-lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLY-LV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEE-EE
Confidence 47889999999999999999654 68999999986422222233466889999999999999999999887665432 22
Q ss_pred ecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 LSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 ~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 22211 134578888899999999999999999 99999999999999999999999999997665433
Q ss_pred Cc-eeccccccCccCcccccc-----CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccC--CCCC
Q 042958 964 SN-WTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD--PRLP 1035 (1075)
Q Consensus 964 ~~-~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 1035 (1075)
.. .....||+.|+|||++.. ..++.++||||+||++|||++|+.||......+ ....+.. ....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~--------~~~~i~~~~~~~~ 228 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE--------TYGKIMNHKEHFQ 228 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH--------HHHHHHcCCCccc
Confidence 22 223468999999999863 457889999999999999999999996432211 1111111 1111
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCC--CCCCHHHHHh
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPE--SRPTMPKVSQ 1071 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~ 1071 (1075)
.+. .....+..+.+++.+|+..+++ .||+++|+++
T Consensus 229 ~~~-~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 229 FPP-DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred CCC-ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 111 1112344688899987755433 4789998875
No 282
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=3e-30 Score=283.07 Aligned_cols=246 Identities=25% Similarity=0.414 Sum_probs=185.5
Q ss_pred CCCCCceecccCceEEEEEEECC--CCEEEEEEccCCCC-------CchhHHHHHHHHHHHHhc-CCcCceeeEEEEeec
Q 042958 816 DFDDEHCIGKGGQGSVYKAELAS--GEIVAVKKFHSPLP-------GEMTFQQEFLNEVKALTE-IRHRNIVKFYGFCSH 885 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 885 (1075)
+|++.+.||+|+||.||+|.... ++.+|+|.+..... .......++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999997654 78899998754221 122234567789988875 799999999999877
Q ss_pred cccchhheec-C-----------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecc
Q 042958 886 VRHSLAMILS-N-----------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953 (1075)
Q Consensus 886 ~~~~l~~~~~-~-----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 953 (1075)
....+..+.. . ......+++..+++++.|++.|+.|||+.. +++|+||+|+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 5544332211 1 012345788899999999999999999631 8999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCC
Q 042958 954 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPR 1033 (1075)
Q Consensus 954 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1075)
|.+....... ......|+..|+|||+..+..++.++||||||+++|||++|+.||...... ..........
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--------~~~~~~~~~~ 229 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--------SLATKIVEAV 229 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--------HHHHHHhhcc
Confidence 9998765443 334567889999999999888999999999999999999999998632211 1111111121
Q ss_pred CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1034 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..... ....+..+.+++.+||+.||++||++.||..+++
T Consensus 230 ~~~~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEPLP--EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCcCC--cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11110 1123456999999999999999999999999875
No 283
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=268.72 Aligned_cols=237 Identities=24% Similarity=0.290 Sum_probs=186.3
Q ss_pred HhcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecc-ccch
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHV-RHSL 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~l 890 (1075)
..++|...+++|+|.||.|-.++ ..+|+.+|+|++++...-..+....-..|-++++.-+||.+..+--.|+.. +.++
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 35788999999999999999994 558999999999987766666677888999999999999988774434332 2223
Q ss_pred hheecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 891 AMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 891 ~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+|.+... .....+++.+.+-+...|..||.|||+. +||.||+|.+|.++|.||++||+|||+++.--...
T Consensus 246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccccc
Confidence 3322211 1234567777788899999999999999 99999999999999999999999999999766667
Q ss_pred CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHH
Q 042958 964 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQD 1043 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1075)
....+.+|||.|.|||++....|..++|.|.+|||||||++|+.||...+. ....+-+....+..|. .
T Consensus 323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------~kLFeLIl~ed~kFPr----~ 390 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------EKLFELILMEDLKFPR----T 390 (516)
T ss_pred ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch--------hHHHHHHHhhhccCCc----c
Confidence 778889999999999999999999999999999999999999999963221 1111222222222222 2
Q ss_pred HHHHHHHHHHHccCCCCCCCC
Q 042958 1044 KLISIVEVAISCLDENPESRP 1064 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RP 1064 (1075)
..++...++...+.+||++|.
T Consensus 391 ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 391 LSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred CCHHHHHHHHHHhhcChHhhc
Confidence 233578899999999999996
No 284
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=2.9e-30 Score=290.34 Aligned_cols=244 Identities=21% Similarity=0.259 Sum_probs=187.0
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|... +++.||+|.+...........+.+..|+++++.++||||+++++++......+.++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 46888899999999999999654 58999999997654333334567899999999999999999999887655432222
Q ss_pred ecC-c---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 LSN-N---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 ~~~-~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
... . .....+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 111 1 1234678899999999999999999999 99999999999999999999999999987653221
Q ss_pred Cc-----------------------------eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCc
Q 042958 964 SN-----------------------------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISS 1014 (1075)
Q Consensus 964 ~~-----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~ 1014 (1075)
.. .....|+..|+|||++.+..++.++||||||+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 1123678899999999988899999999999999999999999864322
Q ss_pred cccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCC----HHHHHh
Q 042958 1015 MSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPT----MPKVSQ 1071 (1075)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 1071 (1075)
. .....+.......+. ....+..+.+++.+||+.||++||+ ++|+++
T Consensus 238 ~--------~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 D--------ETFSNILKKEVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred H--------HHHHHHhcCCccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 1 112222222222211 1114557999999999999999999 777765
No 285
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=1.4e-30 Score=285.09 Aligned_cols=244 Identities=22% Similarity=0.337 Sum_probs=186.5
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|..+ +++.||+|++..... ....+++.+|++++++++||||+++++++......+...
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 36778889999999999999665 689999999876432 244578899999999999999999999887654432222
Q ss_pred ecCcc---------c-cCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 894 LSNNA---------A-AKDLGWTRRMNVIKGISDALSYMHN-DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 894 ~~~~~---------~-~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+... . ...++.....+++.|+++|++|||+ . +++|+||||+||+++.++.++|+|||.+......
T Consensus 79 -e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 79 -EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred -EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 1111 1 1567888889999999999999999 7 9999999999999999999999999998765432
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
... ...++..|+|||+..+..++.++||||+|+++|+|++|+.||.......... ....+.......+.. ...
T Consensus 155 ~~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~ 227 (265)
T cd06605 155 LAK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGI---FELLQYIVNEPPPRL--PSG 227 (265)
T ss_pred Hhh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccH---HHHHHHHhcCCCCCC--Chh
Confidence 221 2678889999999999899999999999999999999999986432211111 111222222211111 111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+.++.+++.+||..||++|||+.|+++
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 228 KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 14556999999999999999999999986
No 286
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=5.8e-30 Score=280.12 Aligned_cols=244 Identities=21% Similarity=0.320 Sum_probs=182.9
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCC--CchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc-cch
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLP--GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR-HSL 890 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~l 890 (1075)
.+|++.+.||+|+||.||+|.. .+|+.||||.+..... ......+.+.+|+.++++++||||+++++++.+.. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 5788899999999999999965 5689999998754321 22233567889999999999999999999886543 222
Q ss_pred hheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 891 AMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 891 ~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
..+++... ....+++....+++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.++....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 22222211 123467888899999999999999999 999999999999999999999999999986543
Q ss_pred CC---CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 962 DS---SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 962 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
.. .......++..|+|||++.+..++.++||||||+++|||++|+.||....... ........+..+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~~~--- 228 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-------AIFKIATQPTNP--- 228 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-------HHHHHhcCCCCC---
Confidence 21 12233568889999999988889999999999999999999999986432111 001111111111
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.........+.+++.+|+. +|++||+++||++.
T Consensus 229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 1123344568899999995 99999999999863
No 287
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=2.1e-30 Score=287.82 Aligned_cols=251 Identities=18% Similarity=0.288 Sum_probs=180.3
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|++|.||+|..+ +++.||||.+....... ....+.+|++++++++||||+++++++......+.+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv- 81 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG--APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV- 81 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC--CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE-
Confidence 67888999999999999999654 78999999986543221 124567899999999999999999998765543222
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.....++.|+++||.|||+. +|+||||||+||+++.++.+||+|||.++.......
T Consensus 82 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 82 FEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 22111 123578888999999999999999999 999999999999999999999999999876433222
Q ss_pred ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh--------hhhh------hhc
Q 042958 965 NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL--------NIAL------DEM 1029 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~--------~~~~------~~~ 1029 (1075)
......++..|+|||++.+ ..++.++||||+|+++|||++|+.||............. .... ...
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 2233456889999998875 457899999999999999999999996433110000000 0000 000
Q ss_pred cCCCCCC--CCc---C--cHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1030 LDPRLPT--PSC---I--VQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1030 ~~~~~~~--~~~---~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....... +.. . .......+.+++.+|++.+|++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000 000 0 0011146789999999999999999999975
No 288
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=3.7e-30 Score=285.50 Aligned_cols=238 Identities=24% Similarity=0.305 Sum_probs=186.6
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|... +++.||+|++...........+.+.+|++++++++||||+++++++......+. +
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~-v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYL-V 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEE-E
Confidence 46888899999999999999654 689999999865433333445678999999999999999999999877654322 2
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 2221 1235678899999999999999999998 9999999999999999999999999999876543
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||..... ....+.......+.+. ..
T Consensus 155 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~----~~ 221 (290)
T cd05580 155 -TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--------IQIYEKILEGKVRFPS----FF 221 (290)
T ss_pred -CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCccCCc----cC
Confidence 2345688999999999888889999999999999999999999864331 1111222222222222 22
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
...+.+++.+||+.||.+|| +++|+++
T Consensus 222 ~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 222 SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred CHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 34689999999999999999 7777764
No 289
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=3e-30 Score=285.83 Aligned_cols=243 Identities=23% Similarity=0.351 Sum_probs=183.6
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+|... +|+.||+|.+.... .......+.+|+.++++++||||+++++++......+.++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 46888899999999999999665 79999999886532 2233467899999999999999999999877654432221
Q ss_pred -ecC----------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 894 -LSN----------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 894 -~~~----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+.. ......+++..+..++.|++.|+.|||+.+ +|+||||||+||+++.++.+||+|||.+..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 111 111236899999999999999999999632 8999999999999999999999999999765432
Q ss_pred CCceeccccccCccCccccccCC------CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCC
Q 042958 963 SSNWTELAGTYGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPT 1036 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1075)
......+++.|+|||.+.+.. ++.++||||+||++|||++|+.||....... .......+.....+.
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~ 229 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-----IFAQLSAIVDGDPPT 229 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-----HHHHHHHHhhcCCCC
Confidence 223346788999999886543 4789999999999999999999986432111 111122222222111
Q ss_pred CCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1037 PSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1037 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+...++.+++.+||+.+|++||+++|+++
T Consensus 230 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 230 ---LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ---CCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 12235567899999999999999999999986
No 290
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=8e-30 Score=278.90 Aligned_cols=243 Identities=28% Similarity=0.427 Sum_probs=185.7
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|+||.||+|.. .+++.||+|.+...... ....+.+..|+.++++++|+||+++++++......+.+.
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~- 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFM- 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEE-
Confidence 478889999999999999965 47899999998765432 345678999999999999999999999876654332222
Q ss_pred cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
+.. .....+++..++.++.|+++|+.|||+. +|+|+||+|+||+++.++.+||+|||.+.........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 111 1123478889999999999999999999 9999999999999999999999999999876544332
Q ss_pred e----eccccccCccCccccccCC---CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 966 W----TELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 966 ~----~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
. ....++..|+|||++.+.. ++.++||||||+++||+++|+.||....... ...........+..+.
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~-- 229 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF----QIMFHVGAGHKPPIPD-- 229 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH----HHHHHHhcCCCCCCCc--
Confidence 2 2356788999999988766 8899999999999999999999996432111 0001111111112221
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.......+.+++.+||+.+|.+|||+.|+++
T Consensus 230 --~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 230 --SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred --ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1122456889999999999999999999875
No 291
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=2e-30 Score=288.26 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=183.7
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc-cchhh
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR-HSLAM 892 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~l~~ 892 (1075)
++|+..+.||+|+||.||+|... +++.||+|.++..... ......+.+|+.++++++||||+++++++...+ ...+.
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 57888899999999999999665 6899999998754322 222346778999999999999999999887652 22222
Q ss_pred eecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+++... ....+++...+.++.||+.||+|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 84 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 84 VMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 222111 123588999999999999999999999 99999999999999999999999999998776543
Q ss_pred CceeccccccCccCccccccCC-CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------------hhhhhc
Q 042958 964 SNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------------IALDEM 1029 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------------~~~~~~ 1029 (1075)
.......+++.|+|||.+.+.. ++.++|+||+|+++|||++|+.||.............. ......
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (293)
T cd07843 161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGA 240 (293)
T ss_pred cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchh
Confidence 3344456788999999887654 68899999999999999999999874332110000000 000000
Q ss_pred cCCCCCCC-----CcCcHH--HHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1030 LDPRLPTP-----SCIVQD--KLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1030 ~~~~~~~~-----~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
........ ...... ....+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 241 KKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred cccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000 000011 2456889999999999999999999985
No 292
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=2.3e-30 Score=288.54 Aligned_cols=253 Identities=22% Similarity=0.263 Sum_probs=183.9
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCC--chhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPG--EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
+|+..+.||+|+||.||+|.. .+|+.||||++...... .......+..|++++++++|+||+++++++......+.
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l- 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINL- 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEE-
Confidence 477788999999999999965 46899999998764332 12234567789999999999999999999877443322
Q ss_pred eecCcc--------cc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNNA--------AA-KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~~--------~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+++... .. ..+++..+..++.||++||.|||+. +++||||+|+||+++.++.++|+|||+++......
T Consensus 80 v~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 80 VFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred EEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 221111 11 2689999999999999999999999 99999999999999999999999999998776544
Q ss_pred CceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------h------hhhhc
Q 042958 964 SNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------I------ALDEM 1029 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------~------~~~~~ 1029 (1075)
.......+++.|+|||.+.+ ..++.++||||||+++|||++|..||.............. . .....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T cd07841 157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDY 236 (298)
T ss_pred ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccc
Confidence 44444567888999998865 4578999999999999999999877764332110000000 0 00000
Q ss_pred cCCCCCCC---CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1030 LDPRLPTP---SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1030 ~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.......+ ..........+.+++.+||+.||++|||++||++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 237 VEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000 00112234578999999999999999999999863
No 293
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=9.6e-31 Score=309.94 Aligned_cols=256 Identities=18% Similarity=0.203 Sum_probs=173.0
Q ss_pred HhcCCCCCceecccCceEEEEEEEC--CCCEEEEEEc--------------cCCCCCchhHHHHHHHHHHHHhcCCcCce
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA--SGEIVAVKKF--------------HSPLPGEMTFQQEFLNEVKALTEIRHRNI 876 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~--------------~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 876 (1075)
..++|++.+.||+|+||+||++..+ +++.+++|.+ .+...........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3578999999999999999998543 2322332211 11111122334668899999999999999
Q ss_pred eeEEEEeeccccchhheecCc------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC
Q 042958 877 VKFYGFCSHVRHSLAMILSNN------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF 944 (1075)
Q Consensus 877 v~l~~~~~~~~~~l~~~~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 944 (1075)
+++++++...+..+.+..... .........+..+++.|++.||+|||+. +|+||||||+||+++.
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNC 302 (501)
T ss_pred CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence 999999877655433211110 0011223456678999999999999999 9999999999999999
Q ss_pred CCCceEeccccccccCCCCCc-eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCC-CCccCccccchhhh
Q 042958 945 DNEAHVSDFGIAKFLKPDSSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP-RDFISSMSSSSLNL 1022 (1075)
Q Consensus 945 ~~~~kl~DfGla~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p-~~~~~~~~~~~~~~ 1022 (1075)
++.+||+|||+++.+...... .....||..|+|||++.+..++.++|||||||++|||++|+.+ +.............
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 999999999999877543322 2345799999999999999999999999999999999998754 33211110000000
Q ss_pred h---------------hhhhhccC-CCCCCCCcCc------HHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1023 N---------------IALDEMLD-PRLPTPSCIV------QDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1023 ~---------------~~~~~~~~-~~~~~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
. .....++. .......... ......+.+++.+|++.||++|||+.|+++
T Consensus 383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 00000000 0000000000 011235678899999999999999999986
No 294
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=8.7e-30 Score=286.15 Aligned_cols=240 Identities=28% Similarity=0.386 Sum_probs=183.5
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.|+..+.||+|+||.||+|.. .+++.||+|++.............+..|++++++++|||++++++++......+.++-
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 366778899999999999965 4689999999875433334445678999999999999999999999877554332221
Q ss_pred cCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 895 SNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 895 ~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
... .....+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++......
T Consensus 106 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~---- 178 (317)
T cd06635 106 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA---- 178 (317)
T ss_pred CCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc----
Confidence 111 1234578999999999999999999999 9999999999999999999999999998754432
Q ss_pred eccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHH
Q 042958 967 TELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQD 1043 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1075)
....+++.|+|||++. ...++.++||||||+++|||++|+.||...... .....+.....+.. ....
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~--~~~~ 248 (317)
T cd06635 179 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNESPTL--QSNE 248 (317)
T ss_pred ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhccCCCC--CCcc
Confidence 2346888999999874 456889999999999999999999998643211 11111111111111 1123
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1044 KLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.+..+.+++.+||+.+|.+||++.||++.
T Consensus 249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 249 WSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred ccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 34568999999999999999999999874
No 295
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.9e-30 Score=290.68 Aligned_cols=254 Identities=24% Similarity=0.293 Sum_probs=183.9
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-chh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-SLA 891 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~l~ 891 (1075)
.++|++.+.||+|+||.||+|.. .+|+.||+|++....... .....+.+|+.++++++|+||+++++++..... .+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 46899999999999999999965 469999999986533221 223456789999999999999999999875432 222
Q ss_pred heecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 892 MILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 892 ~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
.+++... ....+++.++..++.|+++|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 2222211 125588999999999999999999999 9999999999999999999999999999877654
Q ss_pred CCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhh-------hhhhcc----
Q 042958 963 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNI-------ALDEML---- 1030 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~-------~~~~~~---- 1030 (1075)
........++..|+|||.+.+ ..++.++||||+|+++|||++|+.||............... ......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence 333344456788999998865 45789999999999999999999998643321110000000 000000
Q ss_pred --CCCCCC-CCcC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1031 --DPRLPT-PSCI----VQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1031 --~~~~~~-~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+. +... .......+.+++.+|++.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 0000 0112456889999999999999999999985
No 296
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=2.2e-30 Score=286.50 Aligned_cols=251 Identities=21% Similarity=0.253 Sum_probs=182.0
Q ss_pred CCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
|++.+.||.|++|.||+|.. .+|+.||+|++...... ....+.+.+|+++++.++|||++++++++......+..+..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 66788999999999999965 47999999998754322 22345688899999999999999999998765443222211
Q ss_pred Cc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 896 NN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 896 ~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
.. .....+++..+++++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+..........
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 156 (283)
T cd07835 80 LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY 156 (283)
T ss_pred cCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc
Confidence 10 1113578999999999999999999999 99999999999999999999999999998665433333
Q ss_pred eccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-----------------hhhhh
Q 042958 967 TELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-----------------IALDE 1028 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-----------------~~~~~ 1028 (1075)
....++..|+|||++.+. .++.++||||||+++|||++|+.||.............. .....
T Consensus 157 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07835 157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT 236 (283)
T ss_pred CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhh
Confidence 444678899999987664 468899999999999999999999864332110000000 00000
Q ss_pred ccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
................+..+.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 237 FPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred cccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000000111223356889999999999999999999986
No 297
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.97 E-value=5.6e-30 Score=281.24 Aligned_cols=230 Identities=19% Similarity=0.338 Sum_probs=169.5
Q ss_pred eecccCceEEEEEEECC-------------------------CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCce
Q 042958 822 CIGKGGQGSVYKAELAS-------------------------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI 876 (1075)
Q Consensus 822 ~lG~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 876 (1075)
.||+|+||.||+|.+.. ...||+|++... ......++.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 59999999999996421 135889988542 22334678899999999999999
Q ss_pred eeEEEEeeccccchhhe-ecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-
Q 042958 877 VKFYGFCSHVRHSLAMI-LSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN- 946 (1075)
Q Consensus 877 v~l~~~~~~~~~~l~~~-~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~- 946 (1075)
++++++|......+.++ +... .....+++..+.+++.||++||+|||+. +|+||||||+||+++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 99999997655432221 1111 1234578999999999999999999999 999999999999998654
Q ss_pred ------CceEeccccccccCCCCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHH-hCCCCCCccCccccc
Q 042958 947 ------EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVI-KGKHPRDFISSMSSS 1018 (1075)
Q Consensus 947 ------~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~ell-tg~~p~~~~~~~~~~ 1018 (1075)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||........
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~- 230 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK- 230 (274)
T ss_pred ccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-
Confidence 3799999988654322 22357788999998865 56889999999999999995 69999864322110
Q ss_pred hhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1019 SLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..........+.. ....+.+++.+||+.+|++||||+||++.|.
T Consensus 231 --------~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 231 --------ERFYEKKHRLPEP----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred --------HHHHHhccCCCCC----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 0111111111111 1235899999999999999999999999874
No 298
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=5.5e-30 Score=283.33 Aligned_cols=243 Identities=25% Similarity=0.402 Sum_probs=177.9
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHH-HhcCCcCceeeEEEEeeccccchhh
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKA-LTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
++|++.+.||+|+||.||+|... +|+.||+|++....... ...++..|+.. ++..+||||+++++++......+..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ--EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH--HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 46888999999999999999654 79999999987543222 23455556664 6667999999999998765443221
Q ss_pred e-ecC----------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 893 I-LSN----------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 893 ~-~~~----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+ +.. ......+++...+.++.||+.|++|||+++ +++||||||+||+++.++.+||+|||.+..+..
T Consensus 79 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 79 MEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 1 111 112346789999999999999999999853 899999999999999999999999999987643
Q ss_pred CCCceeccccccCccCcccccc----CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 962 DSSNWTELAGTYGYVAPELAYT----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
.. ......++..|+|||.+.+ ..++.++|+||+|+++|||++|+.||...... ..... .......+..+
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~-~~~~~~~~~~~-- 229 (283)
T cd06617 157 SV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQQLK-QVVEEPSPQLP-- 229 (283)
T ss_pred cc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HHHHH-HHHhcCCCCCC--
Confidence 21 2233467889999998865 45688999999999999999999998632110 00000 01111111111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+.++.+++.+||+.+|++||+++|+++
T Consensus 230 ---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 230 ---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ---ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1123456999999999999999999999986
No 299
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-31 Score=279.48 Aligned_cols=241 Identities=25% Similarity=0.280 Sum_probs=184.9
Q ss_pred HhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc-h
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS-L 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-l 890 (1075)
..+.|+..++||+|+||.||-++. .+|+-+|.|.+.+.......-....+.|..++.+++.+.||.+--.|+..+.. +
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 346788889999999999999854 47999999987654433333345678899999999999999986555544432 2
Q ss_pred hheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 891 AMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 891 ~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
++-+++. -+...+++.+.+-+|.+|+-||+|||++ +||+||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 2222211 1234688999999999999999999999 999999999999999999999999999998875
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
.. ..+..+||.+|||||++.+..|+...|.||+||++|||+.|+.||..... ....+.++.. -...+..+.
T Consensus 340 g~-~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke-----Kvk~eEvdrr---~~~~~~ey~ 410 (591)
T KOG0986|consen 340 GK-PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE-----KVKREEVDRR---TLEDPEEYS 410 (591)
T ss_pred CC-ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh-----hhhHHHHHHH---Hhcchhhcc
Confidence 43 34556999999999999999999999999999999999999999963221 1111111111 112223344
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC
Q 042958 1042 QDKLISIVEVAISCLDENPESRPT 1065 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs 1065 (1075)
...+.+..++.+..+++||++|--
T Consensus 411 ~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 411 DKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred cccCHHHHHHHHHHHccCHHHhcc
Confidence 556667899999999999999964
No 300
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=4.8e-30 Score=282.79 Aligned_cols=241 Identities=26% Similarity=0.420 Sum_probs=184.5
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC---cCceeeEEEEeeccccchh
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR---HRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~l~ 891 (1075)
.|+..+.||+|+||.||+|.. .+++.||+|.+..... ....+++.+|+.++++++ |||++++++++......+.
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 477788999999999999965 5789999999865422 223467889999999996 9999999998876543322
Q ss_pred heecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 892 MILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 892 ~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++++.. ....+++.....++.|+++|+.|||+. +++||||+|+||+++.++.++++|||.+..+....
T Consensus 80 -v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 80 -IMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred -EEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 222111 124678999999999999999999999 99999999999999999999999999998876554
Q ss_pred CceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 964 SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
.......|+..|+|||++.+. .++.++||||||+++|+|++|+.||......... ........+.++ ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-----~~~~~~~~~~~~-----~~ 225 (277)
T cd06917 156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM-----MLIPKSKPPRLE-----DN 225 (277)
T ss_pred cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh-----hccccCCCCCCC-----cc
Confidence 444455789999999988654 4689999999999999999999999743321110 000111111111 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..+.++.+++.+||+.||++||++.|+++.
T Consensus 226 ~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 226 GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 144569999999999999999999999763
No 301
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=1.1e-29 Score=280.92 Aligned_cols=241 Identities=24% Similarity=0.357 Sum_probs=183.0
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
.|...+.||+|++|.||+|.. .+++.||+|++... .....+.+.+|+.+++.++||||+++++++......+..+.
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 355567999999999999964 57899999988543 22234668899999999999999999998876544322221
Q ss_pred cCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee
Q 042958 895 SNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT 967 (1075)
Q Consensus 895 ~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 967 (1075)
... .....+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+...........
T Consensus 97 ~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 97 FLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred ccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence 110 0124578889999999999999999999 999999999999999999999999999876554433334
Q ss_pred ccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHH
Q 042958 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1075)
...|++.|+|||...+..++.++||||||+++|||++|+.||........ .........+.... ....+..
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~ 244 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA-----MKRIRDNLPPKLKN----LHKVSPR 244 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH-----HHHHHhcCCCCCcc----cccCCHH
Confidence 45689999999999888899999999999999999999999864322111 01111111111111 1123456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1048 IVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1048 l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+.+++.+||+.+|++||++.|+++
T Consensus 245 l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 245 LRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHHcccChhhCcCHHHHcc
Confidence 999999999999999999999985
No 302
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=5.4e-30 Score=284.36 Aligned_cols=243 Identities=23% Similarity=0.352 Sum_probs=186.9
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
..+|.+.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+..|+.++++++||||+++++++...+..+.+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 36888899999999999999954 578999999985432 22346788999999999999999999998765543322
Q ss_pred eecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 893 ILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 893 ~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+ +... ....+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 95 ~-e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 95 M-EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred E-ecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 2 2111 123568889999999999999999999 999999999999999999999999999876655444
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......+++.|+|||.+.+..++.++||||||+++||+++|+.||.......... .....+... .......
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-------~~~~~~~~~--~~~~~~~ 241 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------LIATNGTPE--LQNPEKL 241 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-------ehhcCCCCC--CCCcccc
Confidence 4444578899999999988889999999999999999999999996432211000 000011100 1112233
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...+.+++.+||+.+|++||+++|+++.
T Consensus 242 ~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 242 SAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 4568999999999999999999999863
No 303
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=2.4e-30 Score=292.09 Aligned_cols=244 Identities=21% Similarity=0.243 Sum_probs=180.8
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||+++.. +++.||+|++.............+..|+.++..++|++|+++++++...+..+.+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv- 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV- 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE-
Confidence 47889999999999999999654 6889999998643222223345688899999999999999999998765543222
Q ss_pred ecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 LSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 ~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 22111 134578888899999999999999999 99999999999999999999999999998765443
Q ss_pred Cc-eeccccccCccCcccccc-----CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccC--CCCC
Q 042958 964 SN-WTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD--PRLP 1035 (1075)
Q Consensus 964 ~~-~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 1035 (1075)
.. .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .....+.. .+.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~~ 228 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETYGKIMNHEERFQ 228 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH--------HHHHHHHcCCCccc
Confidence 22 233569999999998875 46788999999999999999999999643221 11111111 1111
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHh
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPES--RPTMPKVSQ 1071 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1071 (1075)
.+. ...+.+.++.+++.+|+..++++ |++++++++
T Consensus 229 ~p~-~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 229 FPS-HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred CCC-ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 111 11223456889999999866544 468888765
No 304
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-32 Score=269.38 Aligned_cols=242 Identities=27% Similarity=0.341 Sum_probs=181.8
Q ss_pred CCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhc-CCcCceeeEEEEeeccccc-hhheec
Q 042958 819 DEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTE-IRHRNIVKFYGFCSHVRHS-LAMILS 895 (1075)
Q Consensus 819 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~-l~~~~~ 895 (1075)
....||.|+||+|+|-.+ .+|+..|||+++.... ...++++..|.+...+ -++||||+++|.+...+.. .+|.+.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 346699999999999955 4799999999987654 2235778888877544 4899999999987665544 333332
Q ss_pred C-----------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 896 N-----------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 896 ~-----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
+ ......+++.-.-+|+.....||.||-+.. .|+|||+||+|||+|..|.+|+||||.+..+...-
T Consensus 146 d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si- 222 (361)
T KOG1006|consen 146 DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI- 222 (361)
T ss_pred hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHH-
Confidence 2 123455677767778888899999999875 89999999999999999999999999998765432
Q ss_pred ceeccccccCccCccccccC--CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCC--CCcC
Q 042958 965 NWTELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPT--PSCI 1040 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 1040 (1075)
..+.-+|-..|||||.+... .|+.+|||||+|++|||+.||+.||+...+ .-+.+..++.+..|. ....
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-------vfeql~~Vv~gdpp~l~~~~~ 295 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-------VFEQLCQVVIGDPPILLFDKE 295 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-------HHHHHHHHHcCCCCeecCccc
Confidence 22334678899999988643 489999999999999999999999874332 122233333333222 1222
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..+....+..++..|+.+|-.+||..+++.++
T Consensus 296 ~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 296 CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 23466789999999999999999999998764
No 305
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=5.6e-30 Score=281.43 Aligned_cols=247 Identities=25% Similarity=0.402 Sum_probs=182.2
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCC-------chhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPG-------EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
+|...+.||+|+||.||+|.. .+|+.||+|.+...... .....+.+..|+.+++.++|||++++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999954 57999999987542211 1112356889999999999999999999987654
Q ss_pred cchhheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 888 HSLAMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 888 ~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
..+ .+++.. .....+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||.++.
T Consensus 82 ~~~-lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLS-IFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceE-EEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 332 222211 1224678899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC--ceeccccccCccCccccccCC--CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCC
Q 042958 959 LKPDSS--NWTELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRL 1034 (1075)
Q Consensus 959 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1075)
...... ......++..|+|||.+.... ++.++||||+|+++||+++|+.||........ .............
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~ 233 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA----MFKLGNKRSAPPI 233 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH----HHHhhccccCCcC
Confidence 543221 122346788999999987654 78999999999999999999999863222110 0000000011111
Q ss_pred CCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1035 PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1035 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
+.....+.+..+.+++.+||++||++||+++||++.
T Consensus 234 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 234 --PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred --CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 111222345679999999999999999999999863
No 306
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=7.5e-30 Score=279.97 Aligned_cols=235 Identities=23% Similarity=0.383 Sum_probs=174.3
Q ss_pred ceecccCceEEEEEEEC-CCC--EEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhheecC
Q 042958 821 HCIGKGGQGSVYKAELA-SGE--IVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMILSN 896 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~~~~ 896 (1075)
+.||+|+||.||+|... ++. .+|+|.++... .....+.+..|+++++++ +||||+++++++......+ +.++.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~-lv~e~ 77 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY-LAIEY 77 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCce-EEEEe
Confidence 36899999999999664 444 46888876432 223356788999999999 8999999999987654332 22211
Q ss_pred cc-------------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEe
Q 042958 897 NA-------------------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVS 951 (1075)
Q Consensus 897 ~~-------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 951 (1075)
.. ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++
T Consensus 78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~ 154 (270)
T cd05047 78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIA 154 (270)
T ss_pred CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEEC
Confidence 10 123478999999999999999999998 99999999999999999999999
Q ss_pred ccccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhcc
Q 042958 952 DFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEML 1030 (1075)
Q Consensus 952 DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1030 (1075)
|||++...... ........+..|+|||++.+..++.++||||||+++|||++ |+.||...... .......
T Consensus 155 dfgl~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~~ 225 (270)
T cd05047 155 DFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKLP 225 (270)
T ss_pred CCCCccccchh-hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--------HHHHHHh
Confidence 99998632211 11112234567999999988889999999999999999997 99998643211 1111111
Q ss_pred CC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1031 DP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1031 ~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.. ....+ .....++.+++.+||+.+|.+|||++|+++.|+
T Consensus 226 ~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 266 (270)
T cd05047 226 QGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 266 (270)
T ss_pred CCCCCCCC----CcCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 11 11111 122346899999999999999999999999874
No 307
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=8.9e-30 Score=280.52 Aligned_cols=240 Identities=25% Similarity=0.395 Sum_probs=185.8
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
+-|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|+.++++++||||+++++++......+..+
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 3467788999999999999965 478999999876432 2233567899999999999999999999987655433222
Q ss_pred ecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 LSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 ~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
+... ....+++.....++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++.........
T Consensus 82 -e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06641 82 -EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred -EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchhh
Confidence 1111 234578999999999999999999999 9999999999999999999999999999776543333
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
.....++..|+|||++.+..++.++||||||+++|+|++|..||....... ....+.....+. .....+
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~---~~~~~~ 226 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--------VLFLIPKNNPPT---LEGNYS 226 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--------HHHHHhcCCCCC---CCcccC
Confidence 344568889999999988889999999999999999999999986432111 111111111111 122334
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+.+++.+||+.+|.+||++.|+++
T Consensus 227 ~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 227 KPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 56899999999999999999999987
No 308
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=1.2e-29 Score=276.53 Aligned_cols=241 Identities=26% Similarity=0.410 Sum_probs=182.2
Q ss_pred CCCCceecccCceEEEEEEECC-----CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 817 FDDEHCIGKGGQGSVYKAELAS-----GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
|++.+.||+|+||.||+|...+ +..||+|++..... ....+.+..|++.++.++|+||+++++++...+..+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 4567889999999999996653 38899999865422 2245789999999999999999999999877543322
Q ss_pred heecCc--------cccC-C-CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 892 MILSNN--------AAAK-D-LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 892 ~~~~~~--------~~~~-~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
++.... .... . +++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+.....
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 221111 0111 2 89999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcee-ccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCc
Q 042958 962 DSSNWT-ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSC 1039 (1075)
Q Consensus 962 ~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1039 (1075)
...... ...+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ...+..........
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~-- 225 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--------EVLEYLKKGYRLPK-- 225 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHhcCCCCCC--
Confidence 422111 2336789999999988889999999999999999998 88887642211 11111111111111
Q ss_pred CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1040 IVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1040 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
....+.++.+++.+|+..||++|||+.|+++.|
T Consensus 226 -~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 -PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 112345699999999999999999999999875
No 309
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=3e-30 Score=291.59 Aligned_cols=244 Identities=20% Similarity=0.253 Sum_probs=179.5
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|+||.||++..+ +++.||+|++.+...........+..|+.++..++|++|+++++++......+. +
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l-v 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYL-V 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEE-E
Confidence 47888999999999999999665 578899999864222222234568899999999999999999998876654322 2
Q ss_pred ecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 LSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 ~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+++.. ....+++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 22111 134578888899999999999999999 99999999999999999999999999997654332
Q ss_pred Cc-eeccccccCccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCC--CCC
Q 042958 964 SN-WTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDP--RLP 1035 (1075)
Q Consensus 964 ~~-~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 1035 (1075)
.. .....||+.|+|||++. ...++.++|||||||++|||++|+.||....... ....+... +.+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~--------~~~~i~~~~~~~~ 228 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE--------TYGKIMNHKERFQ 228 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH--------HHHHHhCCCcccc
Confidence 22 23457999999999886 3457889999999999999999999997432211 11111111 111
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHh
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPES--RPTMPKVSQ 1071 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 1071 (1075)
.+. .....+.++.+++.+|+..++++ |++++|+++
T Consensus 229 ~p~-~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 229 FPA-QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred CCC-ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 111 11223456889999988654444 689998875
No 310
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=2.8e-30 Score=286.42 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=187.0
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||+|... +++.||+|+++.... .....+.+.+|++++++++|+||+++++++...+..+ ++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~-iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLY-LV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEE-EE
Confidence 36888899999999999999665 689999999865432 2233578899999999999999999999987654332 22
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.+...++.||+.|++|||+. +++||||+|+||+++.++.+||+|||.+........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 2111 1123478899999999999999999999 999999999999999999999999999987665433
Q ss_pred -ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh------hhhhhc--cCC--
Q 042958 965 -NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN------IALDEM--LDP-- 1032 (1075)
Q Consensus 965 -~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~------~~~~~~--~~~-- 1032 (1075)
......++..|+|||++.+. .++.++||||||+++|+|++|+.||.............. ...... .++
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 33445678899999999887 789999999999999999999999864322110000000 000000 000
Q ss_pred ---CCCCCC-------cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1033 ---RLPTPS-------CIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1033 ---~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.++... ......+.++.+++++||+.+|++||+++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000000 0111125679999999999999999999999863
No 311
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=6.4e-30 Score=281.50 Aligned_cols=245 Identities=22% Similarity=0.413 Sum_probs=184.3
Q ss_pred cCCCCCceecccCceEEEEEEEC------CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA------SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
++|+..+.||+|+||.||+|+.+ +.+.||+|.+.... .....+++.+|++++++++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 57888899999999999999753 34679999886432 22345789999999999999999999999876443
Q ss_pred chhhe-ecC----------ccc------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEe
Q 042958 889 SLAMI-LSN----------NAA------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVS 951 (1075)
Q Consensus 889 ~l~~~-~~~----------~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 951 (1075)
.+..+ +.. ... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEc
Confidence 22211 111 110 11589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCC-CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhc
Q 042958 952 DFGIAKFLKPDS-SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEM 1029 (1075)
Q Consensus 952 DfGla~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1029 (1075)
|||++....... .......++..|+|||.+.+..++.++||||||+++|++++ |..||....... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--------~~~~~ 231 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--------VLNRL 231 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--------HHHHH
Confidence 999987543222 22333456788999999988889999999999999999998 888885332211 11111
Q ss_pred cCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1030 LDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.......+ .....+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 232 ~~~~~~~~--~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 QAGKLELP--VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HcCCcCCC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11111111 11123346999999999999999999999999875
No 312
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=8.8e-30 Score=278.57 Aligned_cols=245 Identities=25% Similarity=0.411 Sum_probs=191.0
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|++.+.||+|++|.||+|... +++.||||++...... ...+.+..|++.+++++|+|++++++++......+..+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 36888899999999999999665 6999999998764322 34678999999999999999999999987764432222
Q ss_pred ecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN--------AAAKDLGWTRRMNVIKGISDALSYMHN-DCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.... .....+++..+.+++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+........
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 1111 123567889999999999999999999 8 999999999999999999999999999987765444
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHH-
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQD- 1043 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1043 (1075)
......++..|+|||.+.+..++.++||||||+++|||++|+.||....... .......+.....+. ....
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~ 227 (264)
T cd06623 156 QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS-----FFELMQAICDGPPPS---LPAEE 227 (264)
T ss_pred cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC-----HHHHHHHHhcCCCCC---CCccc
Confidence 4345568899999999998889999999999999999999999987543211 111122222221111 1112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1044 KLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.+..+.+++.+||+.+|++||++.|+++.
T Consensus 228 ~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 228 FSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 44579999999999999999999999863
No 313
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=5.1e-30 Score=286.57 Aligned_cols=247 Identities=20% Similarity=0.229 Sum_probs=182.0
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|+||.||++... +++.||+|.+...........+.+.+|+++++.++||||+++++++......+..+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999654 68899999986543222334567889999999999999999999887655332222
Q ss_pred -ecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC-
Q 042958 894 -LSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS- 964 (1075)
Q Consensus 894 -~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~- 964 (1075)
.... .....+++.....++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 1111 1234578888999999999999999999 999999999999999999999999999874211100
Q ss_pred --------------ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhcc
Q 042958 965 --------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEML 1030 (1075)
Q Consensus 965 --------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1030 (1075)
......++..|+|||++.+..++.++|+||||+++||+++|+.||..... ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--------~~~~~~~~ 229 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFGQVI 229 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHH
Confidence 01123578899999999888899999999999999999999999863221 11111111
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1031 DPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
......+.. ....+..+.+++.+||+.||++||++.++.+.+
T Consensus 230 ~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 230 SDDIEWPEG-DEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred hcccCCCCc-cccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 111111111 112344689999999999999999965555443
No 314
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=4.6e-30 Score=281.63 Aligned_cols=236 Identities=24% Similarity=0.417 Sum_probs=177.6
Q ss_pred ceecccCceEEEEEEECC-------CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 821 HCIGKGGQGSVYKAELAS-------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
+.||+|+||.||+|+..+ ++.||+|.+.... ......++.+|+.+++.++||||++++++|......+..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v- 77 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYII- 77 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEE-
Confidence 368999999999996542 2579999886432 123356789999999999999999999998765443222
Q ss_pred ecCcc----------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-----CceEec
Q 042958 894 LSNNA----------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-----EAHVSD 952 (1075)
Q Consensus 894 ~~~~~----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-----~~kl~D 952 (1075)
++... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .++++|
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECC
Confidence 11110 123468899999999999999999998 999999999999999887 899999
Q ss_pred cccccccCCCCC--ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhc
Q 042958 953 FGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEM 1029 (1075)
Q Consensus 953 fGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1029 (1075)
||+++....... ......++..|+|||++.+..++.++||||||+++|||++ |+.||....... ....+
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--------~~~~~ 226 (269)
T cd05044 155 FGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--------VLQHV 226 (269)
T ss_pred cccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--------HHHHH
Confidence 999976543321 1122345688999999999999999999999999999998 999986332211 11111
Q ss_pred cC-CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1030 LD-PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1030 ~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.. ..... ....+..+.+++.+||+++|.+||++++|++.|+
T Consensus 227 ~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 227 TAGGRLQK----PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred hcCCccCC----cccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11 11111 1234557899999999999999999999999874
No 315
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=6.6e-30 Score=278.68 Aligned_cols=230 Identities=23% Similarity=0.390 Sum_probs=171.9
Q ss_pred ceecccCceEEEEEEECC-C----------CEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 821 HCIGKGGQGSVYKAELAS-G----------EIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~-g----------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
+.||+|+||.||+|...+ + ..|++|.+.... .. ...+.+|+.++++++||||+++++++......
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcE
Confidence 468999999999997653 3 257888765432 11 57889999999999999999999998763222
Q ss_pred hhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-------CceEeccc
Q 042958 890 LAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-------EAHVSDFG 954 (1075)
Q Consensus 890 l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-------~~kl~DfG 954 (1075)
+.+.+... .....+++..++.++.||+.||+|||+. +|+||||||+||+++.++ .+|++|||
T Consensus 77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 22211111 1122578999999999999999999999 999999999999999888 79999999
Q ss_pred cccccCCCCCceeccccccCccCccccccC--CCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccC
Q 042958 955 IAKFLKPDSSNWTELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLD 1031 (1075)
Q Consensus 955 la~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1075)
++..... .....++..|+|||++.+. .++.++||||||+++||+++ |..||......... .... ..
T Consensus 154 ~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~-----~~~~--~~ 222 (259)
T cd05037 154 IPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE-----RFYQ--DQ 222 (259)
T ss_pred ccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH-----HHHh--cC
Confidence 9986543 2234567789999998876 78899999999999999999 57777543211100 0000 11
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1032 PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1032 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
...+.+. ...+.+++.+||..+|.+|||+.||++.|+
T Consensus 223 ~~~~~~~------~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 HRLPMPD------CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCCCCCC------chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111111 146899999999999999999999999874
No 316
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=6.3e-30 Score=278.68 Aligned_cols=241 Identities=23% Similarity=0.351 Sum_probs=184.4
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCC--CchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLP--GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
+|+..+.||+|+||.||+|... +++.||+|.+..... ...+..+.+.+|+++++.++|+||+++++++......+.+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999665 799999998865332 1233457899999999999999999999998765543222
Q ss_pred eecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+ +... ....+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||.+.......
T Consensus 81 ~-e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 L-ELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred E-EecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 2 1111 133478899999999999999999999 99999999999999999999999999998754432
Q ss_pred CceeccccccCccCccccccCC-CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 964 SNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
......++..|+|||.+.... ++.++|+||||+++|++++|+.||....... ....... ....+. ...
T Consensus 157 -~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-----~~~~~~~--~~~~~~---~~~ 225 (258)
T cd06632 157 -FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-----AVFKIGR--SKELPP---IPD 225 (258)
T ss_pred -cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-----HHHHHHh--cccCCC---cCC
Confidence 234456889999999987766 8999999999999999999999986432111 0000011 011111 112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.....+.+++.+||+.+|.+||++.|+++
T Consensus 226 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 226 HLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 23456899999999999999999999986
No 317
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=8.9e-30 Score=290.57 Aligned_cols=254 Identities=22% Similarity=0.315 Sum_probs=185.2
Q ss_pred HhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc---
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH--- 888 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 888 (1075)
..++|+..+.||+|+||.||+|.. .+|+.||+|++..... ......++.+|+.++++++||||+++++++.....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 457899999999999999999954 4799999999865432 22334567889999999999999999998864331
Q ss_pred --chhheecCccc------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 --SLAMILSNNAA------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 --~l~~~~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
..+++++.... ...+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++...
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 11222222111 12378888899999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchh--------------hhhhhh
Q 042958 961 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSL--------------NLNIAL 1026 (1075)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~--------------~~~~~~ 1026 (1075)
.... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||...+....... ......
T Consensus 170 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
T cd07850 170 TSFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV 248 (353)
T ss_pred CCCC-CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence 4322 2334678899999999999999999999999999999999999864321100000 000000
Q ss_pred hhccCCCC----------------CCCC-cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1027 DEMLDPRL----------------PTPS-CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1027 ~~~~~~~~----------------~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
......+. +... ......+..+.+++.+|++.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000000 0000 001123456889999999999999999999985
No 318
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=2e-30 Score=293.85 Aligned_cols=254 Identities=23% Similarity=0.322 Sum_probs=182.8
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc----
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH---- 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 888 (1075)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... .......+.+|+.++++++||||+++++++.....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46899999999999999999954 579999999986422 22234678899999999999999999988765432
Q ss_pred chhheecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 889 SLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 889 ~l~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
..+++++.. .....+++...+.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 82 DVYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADP 158 (336)
T ss_pred eEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence 111111111 1234688999999999999999999999 999999999999999999999999999986543
Q ss_pred CCC---ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh-------hhhhhhhcc
Q 042958 962 DSS---NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN-------LNIALDEML 1030 (1075)
Q Consensus 962 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~-------~~~~~~~~~ 1030 (1075)
... ......|+..|+|||.+.+ ..++.++||||+|+++|||++|+.||............ .......+.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
T cd07849 159 EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCII 238 (336)
T ss_pred cccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 322 1223568899999998654 46889999999999999999999999643211000000 000000000
Q ss_pred CC-------CCCCCCc-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1031 DP-------RLPTPSC-----IVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1031 ~~-------~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.. ..+.... .....+.++.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 239 SLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred chhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0000000 001224568899999999999999999999864
No 319
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=1e-29 Score=278.82 Aligned_cols=246 Identities=22% Similarity=0.372 Sum_probs=185.9
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCc---hhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGE---MTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
+|+..+.||+|+||.||+|.. .+++.||+|++....... ....+.+..|++++++++|+||+++++++.+.+....
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999954 679999999986543221 2235678999999999999999999999877665433
Q ss_pred heecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-CceEeccccccccCCC
Q 042958 892 MILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-EAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 892 ~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~ 962 (1075)
++.... .....+++.....++.|++.|+.|||+. +++|+||+|+||+++.++ .+||+|||.+..+...
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 322111 1134578899999999999999999999 999999999999998876 5999999999876543
Q ss_pred CC----ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 963 SS----NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 963 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
.. ......++..|+|||.+.+..++.++||||+|+++|++++|+.||......... .......... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~--~~~ 230 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-----ALIFKIASAT--TAP 230 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-----HHHHHHhccC--CCC
Confidence 21 112346788999999998888999999999999999999999998633221110 0111110000 011
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
........++.+++.+|++.+|.+||++.|+++
T Consensus 231 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 231 SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 122344567999999999999999999999975
No 320
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=7.9e-30 Score=279.36 Aligned_cols=240 Identities=22% Similarity=0.309 Sum_probs=167.9
Q ss_pred eecccCceEEEEEEECCC---CEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc
Q 042958 822 CIGKGGQGSVYKAELASG---EIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA 898 (1075)
Q Consensus 822 ~lG~G~~g~Vy~~~~~~g---~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~ 898 (1075)
.||+|+||.||+|...++ ..+++|.+.... .....+.+.+|+..++.++||||++++++|...... .+.++...
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~-~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPY-LLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCcc-EEEEecCC
Confidence 599999999999965433 346677665432 223357899999999999999999999998765432 22222111
Q ss_pred c-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC--
Q 042958 899 A-------------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS-- 963 (1075)
Q Consensus 899 ~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~-- 963 (1075)
. .....+.....++.||++||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 1 12345566678999999999999999 99999999999999999999999999986432221
Q ss_pred CceeccccccCccCcccccc-------CCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCC
Q 042958 964 SNWTELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLP 1035 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1075)
.......++..|+|||++.. ..++.++||||||+++|||++ |..||.....................++..+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE 235 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence 12234567889999998753 245789999999999999997 5678753322111110000111111112211
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
......+.+++..|| .+|++||+++||++.|.
T Consensus 236 ------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 236 ------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 123346888999999 67999999999999873
No 321
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=4.9e-30 Score=285.54 Aligned_cols=253 Identities=19% Similarity=0.247 Sum_probs=181.7
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeecccc----
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRH---- 888 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~---- 888 (1075)
++|+..+.||+|+||.||+|... +|+.||||+....... ......+.+|+.+++.+ +||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 46888999999999999999654 7899999987654322 22345788899999999 46999999998865443
Q ss_pred chhheecCcc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC-CCCceEeccc
Q 042958 889 SLAMILSNNA-------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF-DNEAHVSDFG 954 (1075)
Q Consensus 889 ~l~~~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfG 954 (1075)
..+++++... ....+++...+.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 80 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 80 SLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred eEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 1111111110 124578999999999999999999999 9999999999999998 8899999999
Q ss_pred cccccCCCCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhh---hhhhc-
Q 042958 955 IAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNI---ALDEM- 1029 (1075)
Q Consensus 955 la~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~- 1029 (1075)
.++.+...........+++.|+|||++.+ ..++.++||||||+++|||++|..||............... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 99876544333344467889999998765 45789999999999999999999998643322110000000 00000
Q ss_pred ------c----CCCCCC--CCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1030 ------L----DPRLPT--PSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1030 ------~----~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
. .+.... ...........+.+++.+||++||.+||+++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 000000 00001123456899999999999999999999975
No 322
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=8.3e-30 Score=277.37 Aligned_cols=239 Identities=21% Similarity=0.342 Sum_probs=183.3
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++...+..+ +++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~-lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALM-IVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEE-EEE
Confidence 478889999999999999954 47899999998754332 233578999999999999999999999876544332 222
Q ss_pred cCcc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-CceEeccccccccCCC
Q 042958 895 SNNA-----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-EAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 895 ~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~ 962 (1075)
+... ....+++..+.+++.|+++|++|||+. +++||||+|+||+++.++ .+|++|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 2111 134578999999999999999999999 999999999999998654 5899999999876543
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||+...... ............ ...
T Consensus 156 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~ 223 (256)
T cd08220 156 SK-AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--------LVLKIMSGTFAP---ISD 223 (256)
T ss_pred cc-ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--------HHHHHHhcCCCC---CCC
Confidence 22 233568889999999998889999999999999999999999986432211 111111111111 111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+..+.+++.+||+.+|++|||+.|+++
T Consensus 224 ~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 RYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 23446899999999999999999999986
No 323
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.97 E-value=4.3e-30 Score=279.84 Aligned_cols=230 Identities=21% Similarity=0.384 Sum_probs=170.6
Q ss_pred ceecccCceEEEEEEEC-C-------CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 821 HCIGKGGQGSVYKAELA-S-------GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~-~-------g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
+.||+|+||.||+|... . ...||+|.+... .....+++..|+.+++.++||||+++++++......+.
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~l- 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIM- 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEE-
Confidence 36999999999999553 2 234888887532 23335678899999999999999999999876544322
Q ss_pred eecCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCC--------ceEeccc
Q 042958 893 ILSNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNE--------AHVSDFG 954 (1075)
Q Consensus 893 ~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--------~kl~DfG 954 (1075)
+++.. .....+++..+.+++.||+.|++|||+. +|+||||||+||+++.++. ++++|||
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 22211 1123578999999999999999999999 9999999999999988765 5999999
Q ss_pred cccccCCCCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCC-CCCCccCccccchhhhhhhhhhccCC
Q 042958 955 IAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK-HPRDFISSMSSSSLNLNIALDEMLDP 1032 (1075)
Q Consensus 955 la~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1075)
.+...... ....+++.|+|||++.+ ..++.++||||||+++|||++|. .|+....... .......
T Consensus 154 ~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~---------~~~~~~~ 220 (258)
T cd05078 154 ISITVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK---------KLQFYED 220 (258)
T ss_pred cccccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH---------HHHHHHc
Confidence 98765432 23467889999999886 45789999999999999999985 5554322111 0011111
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1033 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+...+. ....++.+++.+||+.||++|||++|+++.|+
T Consensus 221 ~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 RHQLPA----PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred cccCCC----CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111111 12245899999999999999999999999874
No 324
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-30 Score=261.39 Aligned_cols=254 Identities=19% Similarity=0.311 Sum_probs=202.4
Q ss_pred HHHHHHHhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEee
Q 042958 807 YEEIIRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 884 (1075)
Q Consensus 807 ~~e~~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 884 (1075)
++|....++ +.+|+|+|+.|..+ ...+|..||||++.+. ....+.++.+|++++.+. .|+||+.+++||+
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 455555543 56999999999988 6788999999999875 234578899999999998 6999999999999
Q ss_pred ccccchhheecCcc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC---CceEecc
Q 042958 885 HVRHSLAMILSNNA--------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN---EAHVSDF 953 (1075)
Q Consensus 885 ~~~~~l~~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~Df 953 (1075)
+.+.++.++....+ ....+++.+..++.++|+.||+|||.+ ||.|||+||+|||-.... -+|||||
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeecc
Confidence 88776655543332 234578888899999999999999999 999999999999998765 4899999
Q ss_pred ccccccCCC-------CCceeccccccCccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCccCc-------
Q 042958 954 GIAKFLKPD-------SSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISS------- 1014 (1075)
Q Consensus 954 Gla~~~~~~-------~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~------- 1014 (1075)
.++.-+.-. .....+.+|+..|||||+.. ...|+.+.|.||+|||+|-|++|..||.+.=.
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 887644322 12234578999999999763 33588999999999999999999999964221
Q ss_pred cccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1015 MSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1015 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+......+...+.+-++++..|...+.+.+.+..+++...+..||.+|-++.+++.
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 122233345556777778888887788889999999999999999999999998875
No 325
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=4.7e-30 Score=291.16 Aligned_cols=256 Identities=24% Similarity=0.308 Sum_probs=184.9
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeecccc-c
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRH-S 889 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~-~ 889 (1075)
..++|++.+.||+|+||.||+|... +|+.||+|++...... ......+.+|+.+++++ +||||++++++|...+. .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN-ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc-chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 3567888899999999999999654 6899999988643222 22345677899999999 99999999999865432 2
Q ss_pred hhheecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 890 LAMILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 890 l~~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+.++++... ....+.|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 84 IYLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 222222211 122678899999999999999999999 9999999999999999999999999999866543
Q ss_pred CC-----ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh---------------
Q 042958 963 SS-----NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN--------------- 1021 (1075)
Q Consensus 963 ~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~--------------- 1021 (1075)
.. ......|+..|+|||++.+ ..++.++||||||+++|||++|+.||............
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd07852 161 EENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESI 240 (337)
T ss_pred cccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHH
Confidence 21 2233568899999998765 45788999999999999999999998643321100000
Q ss_pred ----hhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1022 ----LNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1022 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.......................+..+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 241 KSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000001111111111111234578999999999999999999999863
No 326
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=1e-29 Score=282.92 Aligned_cols=246 Identities=23% Similarity=0.337 Sum_probs=181.7
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccch
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l 890 (1075)
..++|++.+.||+|+||.||+|... +++.||||++..... .....++..|+.++.+. .||||++++++|......+
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 3467888999999999999999776 489999999875422 22345667788777666 5999999999987655432
Q ss_pred hheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 891 AMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 891 ~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
.. ++... ....+++..+..++.|++.|++|||+.. +|+||||+|+||+++.++.+||+|||++..+..
T Consensus 91 ~v-~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 91 IC-MELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred EE-eeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 22 21111 1346889999999999999999999732 899999999999999999999999999986643
Q ss_pred CCCceeccccccCccCccccccCC----CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
... .....++..|+|||++.+.. ++.++||||||+++|||++|+.||...... ............+..
T Consensus 168 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~ 239 (296)
T cd06618 168 SKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEEPPSL 239 (296)
T ss_pred CCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCCCCCC
Confidence 322 23345788999999987654 788999999999999999999998632110 111112222211111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
. .......++.+++.+||+.||++||+++++++.
T Consensus 240 ~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 240 P-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred C-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 111234568999999999999999999999764
No 327
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=4.8e-30 Score=279.43 Aligned_cols=242 Identities=21% Similarity=0.282 Sum_probs=184.3
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|+||.||+|... +|..||+|.+....... ...+.+.+|+++++.++|+||+++++++......+.++.
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 4778899999999999999654 68999999986532221 234678899999999999999999998876544322221
Q ss_pred cCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-CceEeccccccccCCCC
Q 042958 895 SNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-EAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 895 ~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~~ 963 (1075)
... .....+++..+..++.|+++|++|||+. +++|+||||+||++++++ .+|++|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 110 1123478999999999999999999999 999999999999999886 46999999998766543
Q ss_pred CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHH
Q 042958 964 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQD 1043 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1075)
.......|++.|+|||+..+..++.++||||||+++|||++|+.||...... ...........+.. ...
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~~~ 225 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH--------QLVLKICQGYFAPI---SPN 225 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHhcccCCCC---CCC
Confidence 3334456889999999998888999999999999999999999998633211 11112222221111 112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1044 KLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.+.++.+++.+||+.+|++|||++||++.
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 226 FSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 33468999999999999999999999863
No 328
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=1.3e-29 Score=280.69 Aligned_cols=243 Identities=25% Similarity=0.392 Sum_probs=187.8
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~ 891 (1075)
.++.|+..+.+|+|+||.||+|... +++.||+|++..... ..+.+..|++.++.++|+||+++++++......+.
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 4567888899999999999999665 789999999875432 35678899999999999999999998876544322
Q ss_pred heecCcc---------cc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 892 MILSNNA---------AA-KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 892 ~~~~~~~---------~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
.+ +... .. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 93 v~-e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 93 VM-EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred EE-eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 22 1111 11 2789999999999999999999998 999999999999999999999999999876654
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
.........++..|+|||++.+..++.++||||||+++|+|++|+.||........ .........+. ....
T Consensus 169 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~-~~~~ 239 (286)
T cd06614 169 EKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA--------LFLITTKGIPP-LKNP 239 (286)
T ss_pred chhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHhcCCCC-Ccch
Confidence 43333445678899999999888899999999999999999999999864322110 11111111111 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...+..+.+++.+||+.+|.+||++.||++.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred hhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 2234569999999999999999999999863
No 329
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=6.1e-30 Score=284.52 Aligned_cols=252 Identities=21% Similarity=0.282 Sum_probs=180.8
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
++|+..+.||+|++|.||+|... +|+.||+|++...... ....+.+.+|++++++++||||+++++++......+.++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 46888999999999999999654 7899999998654322 223467889999999999999999999997755433222
Q ss_pred ecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC-CCCceEeccccccccCCC
Q 042958 894 LSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF-DNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 894 ~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~~~ 962 (1075)
+... ....+++.....++.||+.||+|||+. +++||||+|+||+++. ++.+||+|||++......
T Consensus 81 -e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 81 -EYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred -ecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 2111 112246777788999999999999999 9999999999999985 457999999999866544
Q ss_pred CCceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh---hhhhhc---------
Q 042958 963 SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN---IALDEM--------- 1029 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~---~~~~~~--------- 1029 (1075)
........+++.|+|||++.+. .++.++||||+|+++|+|++|+.||.............. ......
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 3333445678899999988764 578899999999999999999999864322110000000 000000
Q ss_pred ---cCCCCCCC--CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1030 ---LDPRLPTP--SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1030 ---~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+..+.. .......+..+.+++.+|++.+|++||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000000 0001122346889999999999999999999986
No 330
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=4.6e-30 Score=290.95 Aligned_cols=255 Identities=21% Similarity=0.274 Sum_probs=184.8
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc----
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH---- 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 888 (1075)
.++|.+.+.||+|+||.||+|.. .+++.||||.+....... .....+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR-IDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 45788999999999999999954 579999999987543222 224567789999999999999999998764421
Q ss_pred chhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 SLAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 ~l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
..+++++.. .....+++.....++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 83 ~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 83 DVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred cEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 112222211 1235688999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccch---------------hhhhh
Q 042958 961 PDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSS---------------LNLNI 1024 (1075)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~---------------~~~~~ 1024 (1075)
..........++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.......... .....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 44333344567889999998764 468899999999999999999999986432110000 00000
Q ss_pred hhhhccC--CCCCCC--CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1025 ALDEMLD--PRLPTP--SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1025 ~~~~~~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
....... +..+.+ .......+..+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000000 000000 00112345678999999999999999999999863
No 331
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=6.7e-30 Score=287.55 Aligned_cols=252 Identities=20% Similarity=0.305 Sum_probs=181.8
Q ss_pred CCCCCceecccCceEEEEEEEC---CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc-cchh
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA---SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR-HSLA 891 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~l~ 891 (1075)
+|++.+.||+|+||.||+|... +++.||+|.+...........+.+.+|+.++++++||||+++++++.... ..+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999654 48999999987643222333467788999999999999999999998762 2222
Q ss_pred heecCcc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC----CCCceEeccc
Q 042958 892 MILSNNA-------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF----DNEAHVSDFG 954 (1075)
Q Consensus 892 ~~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~----~~~~kl~DfG 954 (1075)
++++... ....++....+.++.|++.|++|||+. +|+||||||+||+++. ++.+|++|||
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 2222111 113577888899999999999999999 9999999999999999 8999999999
Q ss_pred cccccCCCCC---ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCcccc-chhhhhhhhh--
Q 042958 955 IAKFLKPDSS---NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSS-SSLNLNIALD-- 1027 (1075)
Q Consensus 955 la~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~-~~~~~~~~~~-- 1027 (1075)
+++....... ......++..|+|||++.+. .++.++||||||+++|||++|+.||........ ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 9987654322 12334678899999987764 578999999999999999999999974432210 0000000000
Q ss_pred --------------------------hccCCCCCCCCcCc------HHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 --------------------------EMLDPRLPTPSCIV------QDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 --------------------------~~~~~~~~~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.......+. .... ......+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS-NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCC-ccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000000 0000 023346889999999999999999999985
No 332
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-31 Score=311.16 Aligned_cols=244 Identities=27% Similarity=0.403 Sum_probs=187.3
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchh-
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLA- 891 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~- 891 (1075)
+-+++....||.|.||.||-| ...+|+..|+|-++..... ....+...+|+.++..++|||+|+++|+-.+.+..+.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 356777889999999999999 6778999999988765433 4445778999999999999999999998877554322
Q ss_pred heecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 892 MILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 892 ~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
|.+...+ .+.-.++.....+..|++.|++|||++ |||||||||.||+++.+|-+|++|||.|+.+.++..
T Consensus 1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence 2222221 122234445566889999999999999 999999999999999999999999999998876643
Q ss_pred c----eeccccccCccCccccccCC---CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 965 N----WTELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 965 ~----~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
. .....||+-|||||++.+.. ...++||||+|||+.||+||+.||...+..... +..+-.+.-|.
T Consensus 1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aI-------My~V~~gh~Pq- 1461 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAI-------MYHVAAGHKPQ- 1461 (1509)
T ss_pred cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHH-------HhHHhccCCCC-
Confidence 2 23568999999999998654 567899999999999999999999744432111 11111112111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+...+.+-.+++.+|+..||++|-++.|+++
T Consensus 1462 --~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1462 --IPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred --CchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 22335667889999999999999999988876
No 333
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=4.2e-29 Score=271.04 Aligned_cols=240 Identities=30% Similarity=0.465 Sum_probs=185.8
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++.++.++||+|+++++++......+..+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4778899999999999999665 789999999875432 345789999999999999999999998876543322211
Q ss_pred cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
... .....+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 111 1124689999999999999999999998 999999999999999999999999999987665432
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
.....++..|+|||++.+..++.++||||||+++|+|++|+.||......... ........+..+.. ...+
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~ 224 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL-----FKIATNGPPGLRNP----EKWS 224 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH-----HHHHhcCCCCcCcc----cccC
Confidence 34457889999999998888999999999999999999999998743221100 00111111111111 1124
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 225 DEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 56999999999999999999999986
No 334
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=1.9e-29 Score=282.72 Aligned_cols=238 Identities=27% Similarity=0.384 Sum_probs=180.8
Q ss_pred CCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
|...+.||+|+||.||+|.. .+|+.||+|++...........+.+..|+++++.++|||++++++++.+....+.++..
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55667899999999999965 46899999998754434444456788999999999999999999998776543322211
Q ss_pred Cc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee
Q 042958 896 NN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT 967 (1075)
Q Consensus 896 ~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 967 (1075)
.. .....+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||++..... ..
T Consensus 103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----~~ 175 (313)
T cd06633 103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----AN 175 (313)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC----CC
Confidence 11 1234588999999999999999999999 999999999999999999999999999865322 23
Q ss_pred ccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 968 ELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
...|+..|+|||++. ...++.++||||||+++|||++|+.||........ .........+.. .....
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~--------~~~~~~~~~~~~--~~~~~ 245 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--------LYHIAQNDSPTL--QSNEW 245 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH--------HHHHHhcCCCCC--Ccccc
Confidence 456888999999874 45688899999999999999999999864322110 011111111110 11123
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+..+.+++.+||+++|.+||++.|+++
T Consensus 246 ~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 246 TDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 345899999999999999999999985
No 335
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=1.7e-29 Score=282.19 Aligned_cols=256 Identities=23% Similarity=0.339 Sum_probs=184.7
Q ss_pred HHhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc--
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-- 888 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 888 (1075)
.+.++|++.+.||+|+||.||+|..+ +|+.||+|+++..... ......+.+|++++++++||||+++++++.....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 45678999999999999999999665 6899999998754322 2224567889999999999999999998876441
Q ss_pred -------chhheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEec
Q 042958 889 -------SLAMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSD 952 (1075)
Q Consensus 889 -------~l~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 952 (1075)
.+.++++... ....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred hccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCc
Confidence 1222222211 123578999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCC-ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhh------
Q 042958 953 FGIAKFLKPDSS-NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNI------ 1024 (1075)
Q Consensus 953 fGla~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~------ 1024 (1075)
||.+........ ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...............
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP 239 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 999987654332 2233456788999998765 35788999999999999999999998743321100000000
Q ss_pred -hhhhccC--------CCCC--CC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1025 -ALDEMLD--------PRLP--TP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1025 -~~~~~~~--------~~~~--~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+.. .... .. .......+..+.+++.+||+.||.+||+++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000 0000 00 0001112456899999999999999999999986
No 336
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=6.5e-30 Score=290.19 Aligned_cols=251 Identities=21% Similarity=0.343 Sum_probs=181.9
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc---
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS--- 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 889 (1075)
..+|...+.||+|+||.||+|.. .+|+.||||++...... ......+.+|+++++.++||||+++++++......
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc-ccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 47899999999999999999965 57999999998754322 22345688999999999999999999988654321
Q ss_pred --hhheecCc------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 890 --LAMILSNN------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 890 --l~~~~~~~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+....... .....+++..+..++.|+++|++|||+. +++||||||+||+++.++.+|++|||+++....
T Consensus 93 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~ 169 (342)
T cd07879 93 QDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHADA 169 (342)
T ss_pred ceEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence 11111111 0123678999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------hh--------
Q 042958 962 DSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------IA-------- 1025 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------~~-------- 1025 (1075)
. .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.............. ..
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07879 170 E---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKA 246 (342)
T ss_pred C---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccc
Confidence 2 233467889999998876 4588999999999999999999999974332110000000 00
Q ss_pred hhhccC--CCCCCCC--cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1026 LDEMLD--PRLPTPS--CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1026 ~~~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...... +..+... .........+.+++.+||+.||++||+++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000000 0000000 000122346889999999999999999999985
No 337
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=8.3e-30 Score=277.70 Aligned_cols=243 Identities=25% Similarity=0.318 Sum_probs=186.7
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|++.+.||.|+||.||+|... +++.||+|.+...........+.+.+|++++++++||||+++++++......+....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999654 699999999876443333446789999999999999999999988766544322221
Q ss_pred cC-c-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 895 SN-N-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 895 ~~-~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
.. . .....+++.....++.|+++|+.|||+. +++|+||+|+||++++++.++++|||.+....... ..
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~ 156 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LT 156 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cc
Confidence 11 1 1124688899999999999999999999 99999999999999999999999999998765432 23
Q ss_pred eccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 967 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
....|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||....... ...............+ ...+.
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~ 227 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI-----RDQIRAKQETADVLYP----ATWST 227 (258)
T ss_pred cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH-----HHHHHHHhccccccCc----ccCcH
Confidence 34568889999999998889999999999999999999999987443210 0011111111111111 22345
Q ss_pred HHHHHHHHccCCCCCCCCCH--HHHHh
Q 042958 1047 SIVEVAISCLDENPESRPTM--PKVSQ 1071 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RPs~--~evl~ 1071 (1075)
.+.+++.+||+.||.+||++ +|+++
T Consensus 228 ~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 228 EAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HHHHHHHHHccCChhHcCCccHHHHhc
Confidence 79999999999999999999 77764
No 338
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=8e-30 Score=282.19 Aligned_cols=251 Identities=20% Similarity=0.302 Sum_probs=183.2
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|++|.||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++...+..+..+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 4788899999999999999764 6899999998754322 224567789999999999999999999887654322211
Q ss_pred -cC---------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 895 -SN---------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 895 -~~---------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
.. ......+++..+.+++.|+++|++|||+. +++||||||+||++++++.++++|||.+........
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 79 YMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred cCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 11 11124578999999999999999999999 999999999999999999999999999986554333
Q ss_pred ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh-------hhhhhhcc-----C
Q 042958 965 NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL-------NIALDEML-----D 1031 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~-----~ 1031 (1075)
......++..|+|||++.+. .++.++||||+|+++||+++|+.||......+...... ....+.+. .
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence 33345678899999987654 56889999999999999999999987443211000000 00000000 0
Q ss_pred CCCCCCC-----cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1032 PRLPTPS-----CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1032 ~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+... ......+..+.+++.+|++.||.+||+++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0111000 001123456889999999999999999999985
No 339
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=3.1e-29 Score=277.93 Aligned_cols=246 Identities=24% Similarity=0.381 Sum_probs=181.0
Q ss_pred CCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC---CcCceeeEEEEeecccc----
Q 042958 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI---RHRNIVKFYGFCSHVRH---- 888 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~---- 888 (1075)
|++.+.||+|+||.||+|..+ +++.||+|++......+ .....+.+|+.+++++ .||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 567789999999999999776 58999999997543322 2235566788777666 59999999999876543
Q ss_pred chhheecCc----------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 889 SLAMILSNN----------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 889 ~l~~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
.+.++++.. .....+++.+++.++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||.+..
T Consensus 80 ~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 80 KLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 122222111 1123589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhc---------
Q 042958 959 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEM--------- 1029 (1075)
Q Consensus 959 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------- 1029 (1075)
+..... .....++..|+|||++.+..++.++||||||+++|||++|+.||......+.. ....+..
T Consensus 157 ~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 157 YSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQL----DKIFDVIGLPSEEEWP 231 (287)
T ss_pred ccCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHH----HHHHHHcCCCChHhcC
Confidence 654322 23345788999999999989999999999999999999999998743321100 0000000
Q ss_pred ---------cCCCC-CCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1030 ---------LDPRL-PTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1030 ---------~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..... ........+....+.+++.+||+.||++||+++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000 0001112234567889999999999999999999975
No 340
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=1.4e-29 Score=283.30 Aligned_cols=241 Identities=27% Similarity=0.382 Sum_probs=181.6
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
+.|+..+.||+|+||.||+|.. .+++.||+|.+...........+++.+|+++++.++|+|++++++++......+.++
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 3466678899999999999965 468899999986533233334567889999999999999999999987754432222
Q ss_pred ecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 894 LSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 894 ~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
.... .....+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++......
T Consensus 95 e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred EccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 1111 1234578899999999999999999999 9999999999999999999999999998765432
Q ss_pred eeccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 966 WTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
....++..|+|||++. ...++.++|||||||++|||++|+.||....... ..........+.. ...
T Consensus 169 -~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~--~~~ 237 (308)
T cd06634 169 -NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNESPAL--QSG 237 (308)
T ss_pred -ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH--------HHHHHhhcCCCCc--Ccc
Confidence 2346788999999874 3467889999999999999999999986332111 0011111111110 112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.....+.+++.+||+.+|++||++++|++.
T Consensus 238 ~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred cccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 344568999999999999999999999864
No 341
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=1.5e-29 Score=287.47 Aligned_cols=258 Identities=21% Similarity=0.318 Sum_probs=186.6
Q ss_pred HHHHHHHhcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeec
Q 042958 807 YEEIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH 885 (1075)
Q Consensus 807 ~~e~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 885 (1075)
..++...+++|+..+.||+|+||.||+|. ..+|+.||+|++...... ....+.+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-hHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 45666788999999999999999999995 457999999998754322 2234668889999999999999999998754
Q ss_pred cccc-----hhheecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecc
Q 042958 886 VRHS-----LAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953 (1075)
Q Consensus 886 ~~~~-----l~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 953 (1075)
.... ...+.+.. .....+++..++.++.|+++|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~df 164 (345)
T cd07877 88 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 164 (345)
T ss_pred cccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEecc
Confidence 3211 11111111 1124588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh-------hhhh
Q 042958 954 GIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN-------LNIA 1025 (1075)
Q Consensus 954 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~-------~~~~ 1025 (1075)
|+++.... ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||............ ....
T Consensus 165 g~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
T cd07877 165 GLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 241 (345)
T ss_pred cccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99986432 2233567889999998766 46788999999999999999999998533221100000 0000
Q ss_pred hh--------hccC--CCCCCCC--cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1026 LD--------EMLD--PRLPTPS--CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1026 ~~--------~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.. .+.. +..+... ........++.+++.+|++.||.+||++.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 242 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 00 0000 0001000 000112446889999999999999999999875
No 342
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=1.5e-29 Score=280.35 Aligned_cols=251 Identities=22% Similarity=0.346 Sum_probs=183.6
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|++.+.||+|+||.||+|.. .+|+.||+|++....... ...+.+.+|+.++++++||||+++++++......+.+ +
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v-~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLV-M 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc-hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEE-e
Confidence 478889999999999999965 478999999987643222 2356789999999999999999999998775443222 2
Q ss_pred cCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC-
Q 042958 895 SNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS- 964 (1075)
Q Consensus 895 ~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~- 964 (1075)
+... ....+++.+++.++.||++||+|||+. +++|+||||+||+++.++.++++|||.+........
T Consensus 79 e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 79 EYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred cccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 1111 124578999999999999999999999 999999999999999999999999999987654332
Q ss_pred ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhh----------------hhh
Q 042958 965 NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNI----------------ALD 1027 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~----------------~~~ 1027 (1075)
......++..|+|||++.+. .++.++||||+|+++|||++|+.||............... ...
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYN 235 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhh
Confidence 23345688999999988654 4689999999999999999998887533221100000000 000
Q ss_pred hccCCCCCC-C-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 EMLDPRLPT-P-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 ~~~~~~~~~-~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+.... + .....+....+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 0 0001123467899999999999999999999986
No 343
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=8.7e-30 Score=288.41 Aligned_cols=254 Identities=24% Similarity=0.316 Sum_probs=184.4
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc---cc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR---HS 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---~~ 889 (1075)
.++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV-PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc-ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 47899999999999999999954 57999999998754322 223467788999999999999999998775432 11
Q ss_pred hhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 890 LAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 890 l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+.++++.. .....+++.....++.||++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 83 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 83 VYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSS 159 (334)
T ss_pred EEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence 22222211 1234589999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCc----eeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh---------------
Q 042958 962 DSSN----WTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN--------------- 1021 (1075)
Q Consensus 962 ~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~--------------- 1021 (1075)
.... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||............
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~ 239 (334)
T cd07855 160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRI 239 (334)
T ss_pred cCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhh
Confidence 3221 223468899999998765 45889999999999999999999999643321100000
Q ss_pred hhhhhhhcc---CCCCCCC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1022 LNIALDEML---DPRLPTP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1022 ~~~~~~~~~---~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
......... ....+.+ .......+..+.+++.+|++.||++||+++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 240 GSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred chhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000000000 0000000 0001223567999999999999999999999886
No 344
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=2.7e-29 Score=274.57 Aligned_cols=244 Identities=22% Similarity=0.293 Sum_probs=183.7
Q ss_pred cCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCC--CCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc-ch
Q 042958 815 NDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPL--PGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH-SL 890 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~l 890 (1075)
.+|++.+.||+|+||.||+|.. .+++.||+|++.... .........+.+|++++++++||||+++++++.+... .+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4788899999999999999954 569999999875321 1223345678999999999999999999998865432 22
Q ss_pred hheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 891 AMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 891 ~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
.++++.. .....+++....+++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||+++....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 2222221 1124578888999999999999999999 999999999999999999999999999986543
Q ss_pred CC---CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCC
Q 042958 962 DS---SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPS 1038 (1075)
Q Consensus 962 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1075)
.. .......++..|+|||++.+..++.++||||||+++||+++|+.||...... ....+...... ..
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~--~~ 228 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM--------AAIFKIATQPT--KP 228 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH--------HHHHHHHcCCC--CC
Confidence 21 1223456889999999999888999999999999999999999998643211 11111111100 01
Q ss_pred cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1039 CIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1039 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..+......+.+++.+||+ +|.+||++.++++.
T Consensus 229 ~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 229 MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 1223344569999999999 57999999998753
No 345
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=1.7e-29 Score=279.85 Aligned_cols=236 Identities=25% Similarity=0.378 Sum_probs=180.9
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc--
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN-- 897 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~-- 897 (1075)
..||+|+||.||+|.. .+|+.||||++... .......+.+|+.+++.++|+|++++++++...+..+..+....
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 5799999999999966 47899999987542 22335678999999999999999999998876554332221111
Q ss_pred -----cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccccc
Q 042958 898 -----AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT 972 (1075)
Q Consensus 898 -----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt 972 (1075)
.....+++.....++.|++.|++|||+. +++||||+|+||++++++.++++|||++..............++
T Consensus 103 ~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 179 (292)
T cd06657 103 ALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 179 (292)
T ss_pred cHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccC
Confidence 1123578899999999999999999999 99999999999999999999999999987665443333445688
Q ss_pred cCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHH
Q 042958 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVA 1052 (1075)
Q Consensus 973 ~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 1052 (1075)
+.|+|||++.+..++.++||||+|+++|||++|+.||........ ...........+.. ....+..+.+++
T Consensus 180 ~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~l~~li 250 (292)
T cd06657 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-----MKMIRDNLPPKLKN----LHKVSPSLKGFL 250 (292)
T ss_pred ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhhCCcccCC----cccCCHHHHHHH
Confidence 999999999888899999999999999999999999864222110 01111111111111 122344688999
Q ss_pred HHccCCCCCCCCCHHHHHh
Q 042958 1053 ISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1053 ~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+||+.||.+||++.|+++
T Consensus 251 ~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 251 DRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHhCCcccCcCHHHHhc
Confidence 9999999999999999986
No 346
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=1.9e-29 Score=277.92 Aligned_cols=236 Identities=25% Similarity=0.297 Sum_probs=177.0
Q ss_pred ecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc---
Q 042958 823 IGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA--- 898 (1075)
Q Consensus 823 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~--- 898 (1075)
||+|+||+||+|.. .+|+.||+|.+...........+.+..|+++++.++||||+++++++...+..+ +++++..
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~-lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLC-LVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEE-EEEecCCCCc
Confidence 69999999999954 479999999986533222233456778999999999999999999887655432 2222111
Q ss_pred --------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccc
Q 042958 899 --------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELA 970 (1075)
Q Consensus 899 --------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~ 970 (1075)
....+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||.+...... .......
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRA 155 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-Ccccccc
Confidence 123588999999999999999999999 9999999999999999999999999999866432 2233456
Q ss_pred cccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHH
Q 042958 971 GTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVE 1050 (1075)
Q Consensus 971 gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1050 (1075)
++..|+|||++.+..++.++||||+|+++|+|++|+.||......... ............. .....+..+.+
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~ 227 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK----EELKRRTLEMAVE----YPDKFSPEAKD 227 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH----HHHHhcccccccc----CCccCCHHHHH
Confidence 788999999998888999999999999999999999998643321110 0111111111111 12223456899
Q ss_pred HHHHccCCCCCCCC-----CHHHHHh
Q 042958 1051 VAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1051 li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
++.+||+.||.+|| ++.++++
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHh
Confidence 99999999999999 6666754
No 347
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=5e-29 Score=272.21 Aligned_cols=234 Identities=25% Similarity=0.308 Sum_probs=181.1
Q ss_pred ecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc---
Q 042958 823 IGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA--- 898 (1075)
Q Consensus 823 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~--- 898 (1075)
||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+....+. +++...
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l-v~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYM-LMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEE-EEecCCCCc
Confidence 699999999999664 589999999876543334456789999999999999999999998876554332 222211
Q ss_pred ------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccccc
Q 042958 899 ------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGT 972 (1075)
Q Consensus 899 ------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt 972 (1075)
....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+....... ......++
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~ 155 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGT 155 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCC
Confidence 134578889999999999999999998 99999999999999999999999999998765432 22334688
Q ss_pred cCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccC--CCCCCCCcCcHHHHHHHHH
Q 042958 973 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD--PRLPTPSCIVQDKLISIVE 1050 (1075)
Q Consensus 973 ~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 1050 (1075)
..|+|||.+.+..++.++|+||+|+++|||++|+.||...... .......+.. .....+ ...+..+.+
T Consensus 156 ~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 225 (262)
T cd05572 156 PEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED------PMEIYNDILKGNGKLEFP----NYIDKAAKD 225 (262)
T ss_pred cCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC------HHHHHHHHhccCCCCCCC----cccCHHHHH
Confidence 9999999998888999999999999999999999998743310 1111222221 111111 122456999
Q ss_pred HHHHccCCCCCCCCC-----HHHHHh
Q 042958 1051 VAISCLDENPESRPT-----MPKVSQ 1071 (1075)
Q Consensus 1051 li~~cl~~dP~~RPs-----~~evl~ 1071 (1075)
++.+||+.+|++||+ ++|+++
T Consensus 226 ~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 226 LIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHccCChhhCcCCcccCHHHHhc
Confidence 999999999999999 788765
No 348
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.96 E-value=1.8e-29 Score=284.51 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=185.4
Q ss_pred HHHhcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc
Q 042958 811 IRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 811 ~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 889 (1075)
...+++|+..+.||+|+||.||+|. ..+++.||||++...... ....+.+..|++++++++||||+++++++......
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 4567889999999999999999995 458999999988654322 22346788999999999999999999988664433
Q ss_pred hhheecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 890 LAMILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 890 l~~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
.+++++... ....+++.....++.|+++|++|||+. +|+||||+|+||+++.++.+|++|||.+......
T Consensus 85 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~ 161 (328)
T cd07856 85 IYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQ 161 (328)
T ss_pred EEEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCCC
Confidence 323322221 134567888889999999999999999 9999999999999999999999999999764332
Q ss_pred CCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh-------hhhhhhhccC---
Q 042958 963 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN-------LNIALDEMLD--- 1031 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~-------~~~~~~~~~~--- 1031 (1075)
.....++..|+|||.+.+ ..++.++||||+|+++|||++|+.||............ .........+
T Consensus 162 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd07856 162 ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT 238 (328)
T ss_pred ---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence 233467889999998765 56899999999999999999999998643221000000 0000000000
Q ss_pred ----CCCCC----C-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1032 ----PRLPT----P-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1032 ----~~~~~----~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...+. + ..........+.+++.+|++.+|++|||++|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 239 LRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0 00011234579999999999999999999999753
No 349
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=2.7e-29 Score=281.78 Aligned_cols=254 Identities=21% Similarity=0.281 Sum_probs=180.1
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc---
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS--- 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 889 (1075)
.++|+..+.||+|+||.||+|.. .+++.||||++...... ......+.+|++++++++||||++++++|......
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 45789999999999999999965 47999999988654322 22234567899999999999999999988654321
Q ss_pred ----hhheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccc
Q 042958 890 ----LAMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIA 956 (1075)
Q Consensus 890 ----l~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 956 (1075)
..++++... ....+++.+.+.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.+
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 122222111 123578999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc----eeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------h
Q 042958 957 KFLKPDSSN----WTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------I 1024 (1075)
Q Consensus 957 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------~ 1024 (1075)
..+...... .....++..|+|||.+.+. .++.++||||||+++|||++|+.||.............. .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 866443221 2234578899999987664 468899999999999999999999864332110000000 0
Q ss_pred ------hhhhccCCCCCCCCc-C------cHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1025 ------ALDEMLDPRLPTPSC-I------VQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1025 ------~~~~~~~~~~~~~~~-~------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..........+.... . .......+.+++.+||+.||.+|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 000000000000000 0 0001235779999999999999999999985
No 350
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=304.40 Aligned_cols=247 Identities=26% Similarity=0.428 Sum_probs=187.4
Q ss_pred HHHhcCCCCCceecccCceEEEEEEEC----C----CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEE
Q 042958 811 IRATNDFDDEHCIGKGGQGSVYKAELA----S----GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYG 881 (1075)
Q Consensus 811 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 881 (1075)
+...++..+.+.+|+|+||.|++|... . ...||||+++..... ...+.+..|+++|+.+ +|+||+.++|
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 334445566679999999999999542 1 457999999876443 4578999999999999 6999999999
Q ss_pred EeeccccchhheecCc------------c-----------cc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCC
Q 042958 882 FCSHVRHSLAMILSNN------------A-----------AA--KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDIS 936 (1075)
Q Consensus 882 ~~~~~~~~l~~~~~~~------------~-----------~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 936 (1075)
+|...+.. ..+.++. . .. ..++..+.+.++.|||.|++||++. ++||||+.
T Consensus 370 ~~t~~~~~-~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLA 445 (609)
T KOG0200|consen 370 ACTQDGPL-YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLA 445 (609)
T ss_pred eeccCCce-EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhh
Confidence 99873322 2221110 1 01 2388899999999999999999999 99999999
Q ss_pred CCCeeeCCCCCceEeccccccccCCCCCce-ecccc--ccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcc
Q 042958 937 SKNVLLDFDNEAHVSDFGIAKFLKPDSSNW-TELAG--TYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 1012 (1075)
Q Consensus 937 ~~Nill~~~~~~kl~DfGla~~~~~~~~~~-~~~~g--t~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~ 1012 (1075)
++||+++++..+||+|||+|+...+..... ....+ +..|||||.+....|+.++|||||||++||++| |..||...
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 999999999999999999999765543322 22232 457999999999999999999999999999998 99998642
Q ss_pred CccccchhhhhhhhhhccCC-CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1013 SSMSSSSLNLNIALDEMLDP-RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
... ....+...++ ++..|. .+..+++++|+.||+.+|++||++.|+++.++
T Consensus 526 ~~~-------~~l~~~l~~G~r~~~P~----~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~ 577 (609)
T KOG0200|consen 526 PPT-------EELLEFLKEGNRMEQPE----HCSDEIYDLMKSCWNADPEDRPTFSECVEFFE 577 (609)
T ss_pred CcH-------HHHHHHHhcCCCCCCCC----CCCHHHHHHHHHHhCCCcccCCCHHHHHHHHH
Confidence 211 0112222222 233332 23446999999999999999999999999875
No 351
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=3.4e-29 Score=277.64 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=182.6
Q ss_pred CCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc-cchhhee
Q 042958 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR-HSLAMIL 894 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~l~~~~ 894 (1075)
|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+.+|+++++.++|||++++++++.... ....+++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 567789999999999999665 58999999997653 22333467889999999999999999999987761 2222222
Q ss_pred cCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC-
Q 042958 895 SNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS- 964 (1075)
Q Consensus 895 ~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~- 964 (1075)
+... ....+++..++.++.|+++|++|||+. +++|+||+|+||++++++.+|++|||.+........
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~ 156 (287)
T cd07840 80 EYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA 156 (287)
T ss_pred ccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc
Confidence 2111 124688999999999999999999999 999999999999999999999999999987654432
Q ss_pred ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------hhhh---hc----
Q 042958 965 NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------IALD---EM---- 1029 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------~~~~---~~---- 1029 (1075)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||+............. .... ..
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07840 157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFE 236 (287)
T ss_pred cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhh
Confidence 2233456889999997765 4578999999999999999999999864332110000000 0000 00
Q ss_pred -cCCCCCCCC---cCcHH-HHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1030 -LDPRLPTPS---CIVQD-KLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1030 -~~~~~~~~~---~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.......+. ..... ++..+.+++.+||+.+|.+||++.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 237 NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000000 00001 25578999999999999999999999863
No 352
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=3.9e-29 Score=271.65 Aligned_cols=240 Identities=23% Similarity=0.393 Sum_probs=187.3
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|++|.||+|... +++.||+|.+...... ....+.+.+|++++++++|||++++++++......+.+ +
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v-~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYII-L 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEE-E
Confidence 4778899999999999999554 6889999999765432 23457899999999999999999999988765433222 2
Q ss_pred cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
+.. .....+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+.........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 111 1125689999999999999999999999 9999999999999999999999999999887655443
Q ss_pred eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 966 WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||....... ..........+..+ ...+
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~------~~~~ 224 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA-----ALFRIVQDDHPPLP------EGIS 224 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH-----HHHHHhccCCCCCC------CCCC
Confidence 445678899999999988888999999999999999999999986433211 00011111111111 1223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+.+++.+|++.+|++|||+.|++.
T Consensus 225 ~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 225 PELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 46899999999999999999999975
No 353
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=2.9e-29 Score=277.42 Aligned_cols=248 Identities=21% Similarity=0.269 Sum_probs=178.4
Q ss_pred CCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccc-cchhhe
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVR-HSLAMI 893 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~l~~~ 893 (1075)
|++.+.||+|+||.||+|.. .+++.||+|+++....... .....+|+..++++. |+|++++++++.+.. ..+.++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE--QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch--hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 56778999999999999954 4789999999875432221 234457888999885 999999999988652 222222
Q ss_pred ecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++... ....+++.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.++.......
T Consensus 79 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 79 FELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 22211 124689999999999999999999999 9999999999999999 9999999999987654322
Q ss_pred ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh-------hhhhhh-----ccC
Q 042958 965 NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL-------NIALDE-----MLD 1031 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~-------~~~~~~-----~~~ 1031 (1075)
.....++..|+|||+..+ ..++.++||||+||++|||++|+.||......+...... ...... ..+
T Consensus 155 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 155 -YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred -cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 233567889999997654 557889999999999999999999996433211000000 000000 000
Q ss_pred CCCCCCC-----cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1032 PRLPTPS-----CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1032 ~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+... ......+..+.+++.+||+++|++||+++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0111000 001234567999999999999999999999986
No 354
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.96 E-value=5.4e-29 Score=271.18 Aligned_cols=240 Identities=25% Similarity=0.387 Sum_probs=187.6
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|+..+.||+|+||.||++... +++.||+|++...... ....+++.+|+++++.++|||++++++.+......+.. +
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv-~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIV-M 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEE-E
Confidence 4778899999999999999654 6899999998764332 23457789999999999999999999988765333222 2
Q ss_pred cCcc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 895 SNNA-------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 895 ~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+... ....+++.+...++.++++|+.|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 1111 136688999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
.........|++.|+|||...+..++.++||||+|+++|+|++|+.||+..... ...........+.. .
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~---~ 224 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL--------ELALKILKGQYPPI---P 224 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH--------HHHHHHhcCCCCCC---C
Confidence 443334457889999999998888999999999999999999999998643211 11111112111111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
......+.+++.+||..+|++|||+.|+++
T Consensus 225 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 225 SQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 123346899999999999999999999986
No 355
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=1.1e-29 Score=285.11 Aligned_cols=254 Identities=22% Similarity=0.305 Sum_probs=181.0
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc---
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS--- 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 889 (1075)
.++|++.+.||+|+||.||+|... +++.||||++......+. ....+.+|++++++++||||+++++++......
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 478999999999999999999654 689999998865432221 134567899999999999999999877543321
Q ss_pred ----hhheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccc
Q 042958 890 ----LAMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIA 956 (1075)
Q Consensus 890 ----l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 956 (1075)
+.++++.. .....+++.++..++.|+++||+|||+. +|+||||||+||++++++.+|++|||++
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccc
Confidence 12221111 1234689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc-----------eeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-
Q 042958 957 KFLKPDSSN-----------WTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN- 1023 (1075)
Q Consensus 957 ~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~- 1023 (1075)
+........ .....+++.|+|||.+.+. .++.++||||||+++|||++|+.||..............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~ 242 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL 242 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 865433211 1233567889999987654 578999999999999999999999864332110000000
Q ss_pred ------------hhhhh----ccCCCCCCC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1024 ------------IALDE----MLDPRLPTP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1024 ------------~~~~~----~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..... ......+.. ..........+.+++.+|++.||++|||+.|++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00000 000011100 0000112246889999999999999999999975
No 356
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=3.3e-29 Score=273.32 Aligned_cols=237 Identities=20% Similarity=0.236 Sum_probs=172.6
Q ss_pred ceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHH-hcCCcCceeeEEEEeeccccchhheecCc-
Q 042958 821 HCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKAL-TEIRHRNIVKFYGFCSHVRHSLAMILSNN- 897 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~l~~~~~~~- 897 (1075)
+.||+|+||.||+|.. .+|+.||||++.............+..|..++ ...+|+|++++++++...+..+.. ++..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv-~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLV-MEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEE-EeccC
Confidence 4699999999999965 46899999998654322222233445555544 455899999999998765443222 2211
Q ss_pred --------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecc
Q 042958 898 --------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTEL 969 (1075)
Q Consensus 898 --------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~ 969 (1075)
.....+++..+.+++.|++.||.|||+. +++||||+|+||+++.++.+|++|||+++.... ....
T Consensus 81 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~ 153 (260)
T cd05611 81 GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKF 153 (260)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----cccC
Confidence 1224578899999999999999999999 999999999999999999999999999876432 2234
Q ss_pred ccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 970 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 970 ~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
.++..|+|||...+..++.++||||+|+++|||++|..||....... ............+.......+..+.
T Consensus 154 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T cd05611 154 VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA--------VFDNILSRRINWPEEVKEFCSPEAV 225 (260)
T ss_pred CCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhcccCCCCcccccCCHHHH
Confidence 67889999999988888999999999999999999999986432211 1111111111111111223445699
Q ss_pred HHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1050 EVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
+++.+||+.+|++||++.++.+.+
T Consensus 226 ~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 226 DLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHccCCHHHccCCCcHHHHH
Confidence 999999999999999876555544
No 357
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=1e-28 Score=269.24 Aligned_cols=242 Identities=27% Similarity=0.402 Sum_probs=188.5
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc-cchhhe
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR-HSLAMI 893 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~l~~~ 893 (1075)
+|+..+.||+|++|.||+|... +++.|++|++...... ....+.+.+|++++++++||||+++++++.... ..+.++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 4777899999999999999665 7999999998765322 334678999999999999999999999987752 122222
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. .....+++.++..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 2211 1123789999999999999999999998 999999999999999999999999999987765433
Q ss_pred --ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccC-CCCCCCCcCc
Q 042958 965 --NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD-PRLPTPSCIV 1041 (1075)
Q Consensus 965 --~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 1041 (1075)
......++..|+|||...+..++.++||||||+++|++++|+.||...... ......... ...+. ..
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~---~~ 226 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-------MAALYKIGSSGEPPE---IP 226 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------HHHHHhccccCCCcC---CC
Confidence 134457889999999998888999999999999999999999999754311 111111111 11111 12
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...+..+.+++.+|++.+|++||++.|+++
T Consensus 227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 233557999999999999999999999986
No 358
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=4e-29 Score=271.99 Aligned_cols=239 Identities=24% Similarity=0.308 Sum_probs=186.3
Q ss_pred CCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhee
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
+|++.+.||+|+||.||++.. .+++.+|+|++....... ....++.+|++++++++|+||+++++++......+.++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~- 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVM- 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEe-
Confidence 477889999999999999954 478999999987543222 33567889999999999999999998877654332222
Q ss_pred cCc-------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 895 SNN-------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 895 ~~~-------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+.. .....+++...+.++.|+++|++|||+. +++|+||+|+||+++.++.+|++|||++.....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 111 1124578889999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
. ......+++.|+|||...+..++.++|+||+|+++||+++|+.||....... ..........+. ..
T Consensus 156 ~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~---~~ 222 (256)
T cd08530 156 N--MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--------LRYKVQRGKYPP---IP 222 (256)
T ss_pred C--CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcCCCCC---Cc
Confidence 4 2233567889999999999889999999999999999999999986433211 111111222221 11
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1042 QDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.....++.+++.+|++.+|++||++.|+++.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 223 PIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 2455679999999999999999999999864
No 359
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=3.8e-29 Score=275.40 Aligned_cols=236 Identities=21% Similarity=0.216 Sum_probs=170.3
Q ss_pred eecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHH---hcCCcCceeeEEEEeeccccchhheecCc
Q 042958 822 CIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKAL---TEIRHRNIVKFYGFCSHVRHSLAMILSNN 897 (1075)
Q Consensus 822 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~l~~~~~~~ 897 (1075)
.||+|+||.||+|.. .+++.||+|.+.............+..|..++ ...+||+|+.+++++...+..+.+ +++.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv-~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI-LDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE-EecC
Confidence 489999999999965 46899999988654332222223344454433 334799999999988765443222 2211
Q ss_pred ---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceec
Q 042958 898 ---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE 968 (1075)
Q Consensus 898 ---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 968 (1075)
.....+++.....++.|++.|++|||+. +|+||||||+||++++++.++++|||++....... ...
T Consensus 80 ~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~ 154 (279)
T cd05633 80 NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHA 154 (279)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--ccC
Confidence 1234589999999999999999999999 99999999999999999999999999997654322 223
Q ss_pred cccccCccCccccc-cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHH
Q 042958 969 LAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047 (1075)
Q Consensus 969 ~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1075)
..|+..|+|||.+. +..++.++||||+||++|||++|+.||.......... ... ........+ ....+.+
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~-~~~~~~~~~------~~~~~~~ 225 (279)
T cd05633 155 SVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDR-MTLTVNVEL------PDSFSPE 225 (279)
T ss_pred cCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHH-HhhcCCcCC------ccccCHH
Confidence 46899999999886 4568899999999999999999999997433211110 000 000111111 2233456
Q ss_pred HHHHHHHccCCCCCCCC-----CHHHHHhh
Q 042958 1048 IVEVAISCLDENPESRP-----TMPKVSQL 1072 (1075)
Q Consensus 1048 l~~li~~cl~~dP~~RP-----s~~evl~~ 1072 (1075)
+.+++.+|++.||++|| +++|+++.
T Consensus 226 ~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 226 LKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 89999999999999999 59998763
No 360
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=3.7e-30 Score=259.15 Aligned_cols=195 Identities=23% Similarity=0.356 Sum_probs=154.6
Q ss_pred HhcCCCCCceecccCceEEEEE-EECC----CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKA-ELAS----GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~----g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
....|+....||+|.||.||+| ..++ ...+|+|+++........ ....-+|+..++.++||||+.+..++...+
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGi-S~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGI-SMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCc-CHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 3467889999999999999999 3332 236999999765433222 245678999999999999999987776533
Q ss_pred cchhhee-------------cCccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC----CCceE
Q 042958 888 HSLAMIL-------------SNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD----NEAHV 950 (1075)
Q Consensus 888 ~~l~~~~-------------~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl 950 (1075)
..+.+.+ +.......++-.....|..||+.|+.|||+. =|+|||+||.||++..+ |.+||
T Consensus 101 ~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 101 KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 3322222 2223346678888899999999999999999 79999999999999988 89999
Q ss_pred eccccccccCCCCCc---eeccccccCccCccccccCC-CCcccchHhHHHHHHHHHhCCCCCCc
Q 042958 951 SDFGIAKFLKPDSSN---WTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDF 1011 (1075)
Q Consensus 951 ~DfGla~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~ 1011 (1075)
+|||+|+.+...-.. ....+.|+.|+|||.+.+.+ |+++.||||.||++.||+|-++-|..
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 999999988765332 34567899999999988764 89999999999999999998877653
No 361
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=4.5e-29 Score=276.01 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=185.2
Q ss_pred CCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 817 FDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
|+..+.||+|++|.||+|.. .+|+.+|+|++...... ......+..|++++++++|+||+++++++......+.++..
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 56778999999999999965 47899999998754332 23356788999999999999999999988765433222111
Q ss_pred Cc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee
Q 042958 896 NN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT 967 (1075)
Q Consensus 896 ~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 967 (1075)
.. .....+++.++..++.|+++|++|||+. +|+|+||||+||+++.++.++|+|||.+...........
T Consensus 80 ~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~ 156 (283)
T cd05118 80 MDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYT 156 (283)
T ss_pred cCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccccc
Confidence 10 1124678999999999999999999999 999999999999999999999999999987765543334
Q ss_pred ccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------hhhhhccC--------
Q 042958 968 ELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------IALDEMLD-------- 1031 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~-------- 1031 (1075)
...++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+....... ........
T Consensus 157 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05118 157 HYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS 236 (283)
T ss_pred CccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhh
Confidence 45678899999998776 789999999999999999999999864332111000000 00000000
Q ss_pred -CC--CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1032 -PR--LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1032 -~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+. ...........+.++.+++.+||++||.+||++.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00 00000112234567999999999999999999999986
No 362
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=2e-29 Score=285.34 Aligned_cols=252 Identities=23% Similarity=0.320 Sum_probs=185.8
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc----cch
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR----HSL 890 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~l 890 (1075)
+|++.+.||+|+||.||+|... +++.||||++..... .....+.+.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 4788899999999999999664 589999999875432 2233567899999999999999999999887654 112
Q ss_pred hheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 891 AMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 891 ~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+++++.. .....+++..++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+......
T Consensus 80 ~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 2222211 1223688999999999999999999999 9999999999999999999999999999876654
Q ss_pred C---CceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh---------------h
Q 042958 963 S---SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL---------------N 1023 (1075)
Q Consensus 963 ~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~---------------~ 1023 (1075)
. .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||............. .
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 3 123445678899999999887 78999999999999999999999986433211000000 0
Q ss_pred hhhhhccC---CCCCCC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1024 IALDEMLD---PRLPTP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1024 ~~~~~~~~---~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
........ ...+.+ .......+..+.+++.+||+.+|.+||+++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 00000000 000000 0001123456899999999999999999999986
No 363
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=2.7e-29 Score=274.78 Aligned_cols=237 Identities=22% Similarity=0.319 Sum_probs=179.6
Q ss_pred ecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc---
Q 042958 823 IGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA--- 898 (1075)
Q Consensus 823 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~--- 898 (1075)
||+|+||.||+|... +|+.||+|++...........+.+.+|++++++++||||+++++.+......+.++ +...
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~-e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVM-EYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEE-ecCCCCc
Confidence 689999999999765 59999999987544333345678899999999999999999998876544332222 2111
Q ss_pred ------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC--------
Q 042958 899 ------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS-------- 964 (1075)
Q Consensus 899 ------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-------- 964 (1075)
....+++..+.+++.|+++||+|||+. +++||||+|+||+++.++.++++|||++........
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 123678999999999999999999999 999999999999999999999999999876543321
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
......++..|+|||...+..++.++||||||+++||+++|+.||...... .............+... ..
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~--~~ 226 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--------EIFQNILNGKIEWPEDV--EV 226 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCcCCCccc--cC
Confidence 223456788999999998888999999999999999999999998643211 11112221222211111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1045 LISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
+..+.+++.+||+.+|++|||+.+|.+.|
T Consensus 227 ~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 227 SDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred CHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 45689999999999999999995555544
No 364
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-30 Score=275.25 Aligned_cols=236 Identities=22% Similarity=0.297 Sum_probs=192.1
Q ss_pred CceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecC--
Q 042958 820 EHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSN-- 896 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~-- 896 (1075)
.+++|.|.||+||-|.+ ++|+.||||++.+...... ...++..|+.+++.++||.||.+.-.|+..+..++++...
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 47899999999999955 5899999999987654433 3578999999999999999999998887766544333111
Q ss_pred -------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC---CceEeccccccccCCCCCce
Q 042958 897 -------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN---EAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 897 -------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfGla~~~~~~~~~~ 966 (1075)
.....+++......++.||+.||.|||.. +|||+|+||+|||+.... ++|+||||.|+.++. .+..
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-ksFR 723 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-KSFR 723 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch-hhhh
Confidence 12355678888888999999999999999 999999999999997543 799999999998874 4556
Q ss_pred eccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH
Q 042958 967 TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI 1046 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1075)
...+||+.|.|||+++...|...-|+||.||++|.-++|..||...++ .-+++-+..+..|...+.+...
T Consensus 724 rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd----------IndQIQNAaFMyPp~PW~eis~ 793 (888)
T KOG4236|consen 724 RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED----------INDQIQNAAFMYPPNPWSEISP 793 (888)
T ss_pred hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc----------hhHHhhccccccCCCchhhcCH
Confidence 778999999999999999999999999999999999999999974322 1233334445555556777888
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHH
Q 042958 1047 SIVEVAISCLDENPESRPTMPKVS 1070 (1075)
Q Consensus 1047 ~l~~li~~cl~~dP~~RPs~~evl 1070 (1075)
...++|...++..-.+|-|.++-+
T Consensus 794 ~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 794 EAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred HHHHHHHHHHHHHHHHhcchHhhc
Confidence 899999999999999998887654
No 365
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=4.4e-29 Score=283.32 Aligned_cols=255 Identities=22% Similarity=0.323 Sum_probs=184.6
Q ss_pred HHHHhcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 810 IIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 810 ~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
+....++|++.+.||+|+||.||+|. ..+|+.||||++..... .....+.+.+|++++++++||||+++++++.....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 33456789999999999999999995 45799999999865332 22334678899999999999999999998865432
Q ss_pred c-----hhheecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccc
Q 042958 889 S-----LAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIA 956 (1075)
Q Consensus 889 ~-----l~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 956 (1075)
. +.+++... .....+++..++.++.|+++|++|||+. +|+||||||+||+++.++.+|++|||++
T Consensus 89 ~~~~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 89 LDRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ccccceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 1 11111111 1134688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh-------hhh---
Q 042958 957 KFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL-------NIA--- 1025 (1075)
Q Consensus 957 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~-------~~~--- 1025 (1075)
...... .....+++.|+|||++.+ ..++.++|+||+|+++|++++|+.||............. ...
T Consensus 166 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07880 166 RQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK 242 (343)
T ss_pred cccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 865432 233467889999998876 457899999999999999999999997432210000000 000
Q ss_pred -----hhhccC--CCCCCC--CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1026 -----LDEMLD--PRLPTP--SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1026 -----~~~~~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...... +..... ..........+.+++.+|++.||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 243 LQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred hcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 000000 0001123346889999999999999999999984
No 366
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=254.10 Aligned_cols=243 Identities=22% Similarity=0.267 Sum_probs=190.7
Q ss_pred HhcCCCCC-ceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeecc---
Q 042958 813 ATNDFDDE-HCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHV--- 886 (1075)
Q Consensus 813 ~~~~~~~~-~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--- 886 (1075)
.+++|++. ++||-|-.|.|..+ ...+|+.+|+|++... ....+|++.--.. .|||||.++++|...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 46677664 57999999999999 4458999999998642 3445677764333 799999999988643
Q ss_pred ccchhheecCcc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC---CCceEec
Q 042958 887 RHSLAMILSNNA-----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD---NEAHVSD 952 (1075)
Q Consensus 887 ~~~l~~~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~D 952 (1075)
...+.++++... +...+++.+.-.|+.||+.|+.|||+. .|.||||||+|+|.+.. ..+|++|
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecc
Confidence 334444443322 234478888899999999999999999 99999999999999754 4699999
Q ss_pred cccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCC
Q 042958 953 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDP 1032 (1075)
Q Consensus 953 fGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1075)
||+|+.-... ....+.+-|+.|.|||++...+|+...|+||+||+||-|++|.+||......... ......+...
T Consensus 208 fGFAK~t~~~-~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais----pgMk~rI~~g 282 (400)
T KOG0604|consen 208 FGFAKETQEP-GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKRRIRTG 282 (400)
T ss_pred cccccccCCC-ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC----hhHHhHhhcc
Confidence 9999975532 3455678899999999999999999999999999999999999999754442221 1222344455
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1033 RLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1033 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+..|...+.+.+.+..++|+.++..+|.+|.|+.|+++
T Consensus 283 qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 283 QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 555566677888899999999999999999999999975
No 367
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=2.2e-29 Score=278.29 Aligned_cols=242 Identities=24% Similarity=0.326 Sum_probs=189.7
Q ss_pred HhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc-h
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS-L 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-l 890 (1075)
....|.+...||+|.|+.|..|++ .+|..||||.+.+..... ...+.+.+|+++|+.+.|||||+++.+....... +
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 346788889999999999999955 479999999998765443 3345689999999999999999999988754433 2
Q ss_pred hheecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 891 AMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 891 ~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++.+... .............++.|+.+|++|+|++ .|||||||++||+++.+..+||+|||++.++.. .
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-~ 208 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY-G 208 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc-c
Confidence 2222211 1223344567778899999999999999 999999999999999999999999999998873 3
Q ss_pred CceeccccccCccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 964 SNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
....+.+|++.|.|||++.+..| .+++|+||+|+++|.++.|..||++..- ...-+..+..++..+...
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l--------k~Lr~rvl~gk~rIp~~m-- 278 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL--------KELRPRVLRGKYRIPFYM-- 278 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc--------ccccchheeeeeccccee--
Confidence 44567899999999999999887 4899999999999999999999984321 111122233333333222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..++.+++++++..+|.+|++++++.+
T Consensus 279 --s~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 279 --SCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred --echhHHHHHHhhccCccccCCHHHhhh
Confidence 224789999999999999999999976
No 368
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=8e-29 Score=280.28 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=178.2
Q ss_pred CCCCCceecccCceEEEEEEEC-C--CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccc---c
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-S--GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVR---H 888 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~---~ 888 (1075)
+|++.+.||+|+||.||+|... + +..||+|++..... .....+.+.+|+++++++ +||||+++++++.... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 4777889999999999999654 4 78999999864322 222346788999999999 5999999998754321 1
Q ss_pred chhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 889 SLAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 889 ~l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
....+++.. .....+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.++...
T Consensus 80 ~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 111111111 1245678999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCC----ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchh-------hhhhhhhh
Q 042958 961 PDSS----NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSL-------NLNIALDE 1028 (1075)
Q Consensus 961 ~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~-------~~~~~~~~ 1028 (1075)
.... ......|+..|+|||+..+ ..++.++||||+|+++|++++|+.||........... ........
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 3221 1233568999999998765 4688999999999999999999999864331100000 00000000
Q ss_pred ccC----------CCCCC--CCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1029 MLD----------PRLPT--PSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1029 ~~~----------~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+.. ...+. ...........+.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 00000 00011112456899999999999999999999875
No 369
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.96 E-value=6.7e-29 Score=274.17 Aligned_cols=241 Identities=24% Similarity=0.338 Sum_probs=186.2
Q ss_pred cCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccchhh
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~l~~ 892 (1075)
++|...+.||+|+||.||+|... +|+.||+|++...........+.+..|++++++++ ||||+++++++......+.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l- 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF- 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE-
Confidence 46888899999999999999654 79999999987643333344577889999999998 9999999998766543322
Q ss_pred eecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 893 ILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 893 ~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+++.. .....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 22211 1233689999999999999999999999 99999999999999999999999999998665432
Q ss_pred C--------------------ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh
Q 042958 964 S--------------------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN 1023 (1075)
Q Consensus 964 ~--------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~ 1023 (1075)
. ......++..|+|||...+..++.++||||+|+++|++++|+.||..... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~ 228 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--------Y 228 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--------H
Confidence 1 12234578899999999888899999999999999999999999874321 1
Q ss_pred hhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCH----HHHHh
Q 042958 1024 IALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTM----PKVSQ 1071 (1075)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 1071 (1075)
.............+. ..+..+.+++.+||+.+|.+||++ +|+++
T Consensus 229 ~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 229 LTFQKILKLEYSFPP----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHHhcCCCCCC----ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111222222222221 224468999999999999999999 88775
No 370
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=7.2e-29 Score=281.27 Aligned_cols=252 Identities=22% Similarity=0.238 Sum_probs=177.9
Q ss_pred cCCC-CCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCch-----------hHHHHHHHHHHHHhcCCcCceeeEEE
Q 042958 815 NDFD-DEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEM-----------TFQQEFLNEVKALTEIRHRNIVKFYG 881 (1075)
Q Consensus 815 ~~~~-~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~l~~ 881 (1075)
++|. +.+.||+|+||.||+|.. .+++.||||++........ .....+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4454 457799999999999954 4799999999865422210 01125778999999999999999999
Q ss_pred EeeccccchhheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecc
Q 042958 882 FCSHVRHSLAMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953 (1075)
Q Consensus 882 ~~~~~~~~l~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 953 (1075)
++...+..+. +++.. .....+++.....++.|+++|++|||+. +++||||+|+||+++.++.+|++||
T Consensus 88 ~~~~~~~~~l-v~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 88 VYVEGDFINL-VMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEecCCcEEE-EEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCc
Confidence 9876554322 22111 1223578888899999999999999999 9999999999999999999999999
Q ss_pred ccccccCC--------------CCCceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccc
Q 042958 954 GIAKFLKP--------------DSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSS 1018 (1075)
Q Consensus 954 Gla~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~ 1018 (1075)
|.+..... .........++..|+|||++.+. .++.++||||+|+++|||++|+.||.........
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99986651 11112233567889999998764 4689999999999999999999998644321100
Q ss_pred hhhhhhhhhhccCC----------------CCCC-CCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1019 SLNLNIALDEMLDP----------------RLPT-PSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1019 ~~~~~~~~~~~~~~----------------~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
... ........+. ..+. ..........++.+++.+|++.||++|||++|++.
T Consensus 244 ~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 244 GRI-FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHH-HHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 000 0000000000 0000 00001122456889999999999999999999986
No 371
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=1.3e-28 Score=276.79 Aligned_cols=248 Identities=17% Similarity=0.191 Sum_probs=173.8
Q ss_pred CceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCc--
Q 042958 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNN-- 897 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~-- 897 (1075)
.+.+|.|+++.||++.. +++.||||++..... .....+.+..|++++++++||||+++++++......+..+....
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 34455556666666544 699999999876422 22345789999999999999999999998876554332221111
Q ss_pred --------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC-----
Q 042958 898 --------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS----- 964 (1075)
Q Consensus 898 --------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~----- 964 (1075)
.....+++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+..+.....
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 1123477888899999999999999999 999999999999999999999999999876543221
Q ss_pred --ceeccccccCccCcccccc--CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhh------------
Q 042958 965 --NWTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDE------------ 1028 (1075)
Q Consensus 965 --~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~------------ 1028 (1075)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||...................
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence 1123456788999999876 357899999999999999999999997433211000000000000
Q ss_pred --------ccCCC--CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1029 --------MLDPR--LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1029 --------~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..++. .............++.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00000 000111222345678899999999999999999999863
No 372
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=2.7e-28 Score=275.41 Aligned_cols=245 Identities=21% Similarity=0.249 Sum_probs=173.0
Q ss_pred ceeccc--CceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec-C
Q 042958 821 HCIGKG--GQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS-N 896 (1075)
Q Consensus 821 ~~lG~G--~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~-~ 896 (1075)
..||+| +||+||+|.. .+|+.||+|++....... ...+.+.+|+.+++.++||||++++++|...+..+..+.. .
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 346666 9999999965 479999999987543222 3357889999999999999999999999876543222111 1
Q ss_pred c---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce-
Q 042958 897 N---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW- 966 (1075)
Q Consensus 897 ~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~- 966 (1075)
. .....+++.....++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 0 0123478888889999999999999999 99999999999999999999999998654332221111
Q ss_pred ------eccccccCccCccccccC--CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh-------------hhh
Q 042958 967 ------TELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL-------------NIA 1025 (1075)
Q Consensus 967 ------~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~-------------~~~ 1025 (1075)
....++..|+|||++.+. .++.++||||+|+++|||++|+.||............. ...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence 112345679999998763 47899999999999999999999996432110000000 000
Q ss_pred hh------------------------hccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1026 LD------------------------EMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1026 ~~------------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.. .+....+. ..........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR--TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhccchhhhhcccccchhcccccccccccccc--chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00 00000000 0112345668999999999999999999999975
No 373
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=1.1e-28 Score=272.89 Aligned_cols=250 Identities=24% Similarity=0.341 Sum_probs=183.1
Q ss_pred CCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
|+..+.||+|+||.||+|... +++.||+|++.... ......+.+..|+.++++++|+|++++++++......+ ++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~-~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLY-LVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceE-EEec
Confidence 566788999999999999655 59999999987653 22233467889999999999999999999887653322 2222
Q ss_pred Cccc---------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 896 NNAA---------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 896 ~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
.... ...+++..+.+++.|+++|++|||+. +|+||||+|+||+++.++.+||+|||.++.........
T Consensus 79 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 155 (282)
T cd07829 79 YCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY 155 (282)
T ss_pred CcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcccc
Confidence 1111 13688999999999999999999999 99999999999999999999999999998765544334
Q ss_pred eccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhh-------hhh---hhhc--cCCC
Q 042958 967 TELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNL-------NIA---LDEM--LDPR 1033 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~-------~~~---~~~~--~~~~ 1033 (1075)
....++..|+|||.+.+. .++.++||||||+++||+++|+.||............. ... .... .+..
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (282)
T cd07829 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPT 235 (282)
T ss_pred CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccc
Confidence 445567889999998766 78999999999999999999999986432211000000 000 0000 0111
Q ss_pred CCCCC-----cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1034 LPTPS-----CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1034 ~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
++... .........+.+++.+||..||++||++.||+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 236 FPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 11100 001122457999999999999999999999985
No 374
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=4.3e-28 Score=267.02 Aligned_cols=235 Identities=21% Similarity=0.230 Sum_probs=170.6
Q ss_pred eecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHH---HHHhcCCcCceeeEEEEeeccccchhheecCc
Q 042958 822 CIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEV---KALTEIRHRNIVKFYGFCSHVRHSLAMILSNN 897 (1075)
Q Consensus 822 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~ 897 (1075)
.||+|+||.||+|.. .+++.||+|.+.............+..|. ..++...||+|+++++++...+..+.+ +++.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v-~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI-LDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEE-EecC
Confidence 489999999999954 56899999988654322222122333443 344455899999999988765543222 2111
Q ss_pred ---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceec
Q 042958 898 ---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE 968 (1075)
Q Consensus 898 ---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 968 (1075)
.....+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+|++|||++....... ...
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--~~~ 154 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHA 154 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--CcC
Confidence 1234589999999999999999999999 99999999999999999999999999997654322 233
Q ss_pred cccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHH
Q 042958 969 LAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047 (1075)
Q Consensus 969 ~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1075)
..|+..|+|||++.++ .++.++||||+|+++|||++|+.||........... . .........++ ...+..
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~--~-~~~~~~~~~~~------~~~s~~ 225 (278)
T cd05606 155 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI--D-RMTLTMAVELP------DSFSPE 225 (278)
T ss_pred cCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH--H-HHhhccCCCCC------CcCCHH
Confidence 5789999999998754 688999999999999999999999975422111110 0 00111111111 122456
Q ss_pred HHHHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1048 IVEVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1048 l~~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
+.+++.+|+..+|.+|| ++.|+++
T Consensus 226 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 226 LRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 99999999999999999 9999986
No 375
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=6.7e-29 Score=281.86 Aligned_cols=251 Identities=23% Similarity=0.293 Sum_probs=178.2
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc---
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS--- 889 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 889 (1075)
..+|+..+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++......
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 36788899999999999999955 5789999999865432 3346788999999999999999999876543221
Q ss_pred ----------hhheecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC-CCCceEe
Q 042958 890 ----------LAMILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF-DNEAHVS 951 (1075)
Q Consensus 890 ----------l~~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~ 951 (1075)
..++++... ....+++...+.++.||++|++|||+. +|+||||||+||+++. ++.+|++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEEC
Confidence 112222111 123578899999999999999999999 9999999999999985 5578999
Q ss_pred ccccccccCCCCC---ceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhh------
Q 042958 952 DFGIAKFLKPDSS---NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLN------ 1021 (1075)
Q Consensus 952 DfGla~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~------ 1021 (1075)
|||.++....... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||............
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999986543211 1123457889999997654 56788999999999999999999999643221100000
Q ss_pred -----hhh---hh-hhc----cCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1022 -----LNI---AL-DEM----LDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1022 -----~~~---~~-~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
... .. ... ...+.+. .........++.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPL-RDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCH-HHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000 00 000 0000000 0001123356889999999999999999999985
No 376
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=2e-28 Score=271.50 Aligned_cols=247 Identities=21% Similarity=0.294 Sum_probs=182.4
Q ss_pred CCCCCceecccCceEEEEEEE----CCCCEEEEEEccCCCC-CchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccc
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL----ASGEIVAVKKFHSPLP-GEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 889 (1075)
+|++.+.||+|+||.||+|.. .+++.||||+++.... ......+.+..|++++.++ +||||+++++++......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477789999999999999954 3578999999864321 1222346788999999999 699999999887665443
Q ss_pred hhheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 890 LAMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 890 l~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
+ ++++... ....+++.....++.|+++||+|||+. +++||||+|+||+++.++.++++|||+++...
T Consensus 81 ~-lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 H-LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred E-EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 2 2222111 134578888999999999999999998 99999999999999999999999999998755
Q ss_pred CCCCc-eeccccccCccCccccccCC--CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 961 PDSSN-WTELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 961 ~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
..... .....|+..|+|||...+.. .+.++||||||+++|||++|+.||......... ......+.....+.+
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~ 232 (288)
T cd05583 157 AEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ----SEISRRILKSKPPFP 232 (288)
T ss_pred cccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH----HHHHHHHHccCCCCC
Confidence 43322 22346889999999987665 788999999999999999999998632211111 111112222222222
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
......+.+++.+||+.||++|||+.+|.+.|+
T Consensus 233 ----~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 233 ----KTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred ----cccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 123346899999999999999999988877654
No 377
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=1.5e-28 Score=268.08 Aligned_cols=241 Identities=21% Similarity=0.277 Sum_probs=179.6
Q ss_pred CCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCC--chhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 816 DFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPG--EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
+|.+.+.||+|+||.||++... .+..+++|..+..... ......++..|+.++++++||||+++++++.+....+.+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4788899999999999999554 3555666665432211 112234577899999999999999999887665443222
Q ss_pred ee-cC-----------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 893 IL-SN-----------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 893 ~~-~~-----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
+. .. ......+++.+++.++.|+++|+.|||+. +++|+||+|+||+++. +.+|++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 11 11 11235688999999999999999999999 9999999999999975 679999999998765
Q ss_pred CCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcC
Q 042958 961 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCI 1040 (1075)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1075)
..........|++.|+|||...+..++.++|+||||+++|+|++|+.||..... ............+. .
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~---~ 225 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--------LSVVLRIVEGPTPS---L 225 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHcCCCCC---C
Confidence 544444455688999999999888899999999999999999999999863221 11111121121111 1
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+.++.+++.+||+.+|++||++.|+++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 2344567999999999999999999999986
No 378
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=4e-28 Score=263.09 Aligned_cols=234 Identities=25% Similarity=0.312 Sum_probs=181.0
Q ss_pred ecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecC-c---
Q 042958 823 IGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSN-N--- 897 (1075)
Q Consensus 823 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~-~--- 897 (1075)
||+|+||.||++... +++.||+|++...........+.+..|++++++++||||+++++++......+.++-.. .
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999664 68999999987654444445678999999999999999999998876654332222111 1
Q ss_pred ----cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceecccccc
Q 042958 898 ----AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTY 973 (1075)
Q Consensus 898 ----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~ 973 (1075)
.....+++.....++.|+++|+.|+|+. +++|+||+|+||+++.++.++++|||.+..............++.
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 1233578999999999999999999998 999999999999999999999999999987654433344557888
Q ss_pred CccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHH
Q 042958 974 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAI 1053 (1075)
Q Consensus 974 ~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 1053 (1075)
.|+|||...+...+.++|+||||+++||+++|+.||...+. ......+.....+.+.. .+..+.+++.
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~----~~~~l~~~i~ 225 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILKDPLRFPEF----LSPEARDLIS 225 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhcCCCCCCCC----CCHHHHHHHH
Confidence 99999999888889999999999999999999999864322 11122222222222222 2346899999
Q ss_pred HccCCCCCCCCCH---HHHHh
Q 042958 1054 SCLDENPESRPTM---PKVSQ 1071 (1075)
Q Consensus 1054 ~cl~~dP~~RPs~---~evl~ 1071 (1075)
+||..||++||++ +++.+
T Consensus 226 ~~l~~~p~~R~~~~~~~~l~~ 246 (250)
T cd05123 226 GLLQKDPTKRLGSGGAEEIKA 246 (250)
T ss_pred HHhcCCHhhCCCcccHHHHHh
Confidence 9999999999999 55543
No 379
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.5e-29 Score=251.65 Aligned_cols=245 Identities=21% Similarity=0.292 Sum_probs=190.9
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~ 891 (1075)
-.+|...++||+|+|.+|..++++ +.+.+|+|++++....+.+..+-+..|-.+..+- +||.+|.+..+|......+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 468999999999999999999654 6889999999886655554455666777777666 79999999887765443322
Q ss_pred he--------ecCccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 892 MI--------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 892 ~~--------~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
++ +........++++..+.+...|.-||.|||++ ||+.||+|..||++|.+|++|++|+|+++.--.+.
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence 22 11223345678888888999999999999999 99999999999999999999999999999866666
Q ss_pred CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHH
Q 042958 964 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQD 1043 (1075)
Q Consensus 964 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1075)
....+.+|||.|+|||.+++..|...+|.|++||+|+|||.|+.||+................+.++......|. .
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr----s 481 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR----S 481 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc----e
Confidence 777889999999999999999999999999999999999999999996553322222222233344444444332 2
Q ss_pred HHHHHHHHHHHccCCCCCCCCC
Q 042958 1044 KLISIVEVAISCLDENPESRPT 1065 (1075)
Q Consensus 1044 ~~~~l~~li~~cl~~dP~~RPs 1065 (1075)
.+.....+++.-+++||++|.-
T Consensus 482 lsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 482 LSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred eehhhHHHHHHhhcCCcHHhcC
Confidence 3345678899999999999863
No 380
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-29 Score=262.93 Aligned_cols=252 Identities=27% Similarity=0.386 Sum_probs=190.3
Q ss_pred HhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCch----hHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEM----TFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
..++|-..+.+|+|+|++||+| ++...+.||||+-.....+.. .+.+...+|.++-+.+.||.||++|+|+.-+.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3466777889999999999999 777789999998654332222 23455778999999999999999999998887
Q ss_pred cchhheecCccc---------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeC---CCCCceEecccc
Q 042958 888 HSLAMILSNNAA---------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLD---FDNEAHVSDFGI 955 (1075)
Q Consensus 888 ~~l~~~~~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~DfGl 955 (1075)
+.++.++++..+ ...+++.+.+.|+.||..||.||.+. .|+|||-||||.|||+- ..|.+||+|||+
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 777766655433 34467888899999999999999987 46999999999999994 457899999999
Q ss_pred ccccCCCCCc-------eeccccccCccCccccccC----CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhh
Q 042958 956 AKFLKPDSSN-------WTELAGTYGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNI 1024 (1075)
Q Consensus 956 a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~ 1024 (1075)
++.+..+... ....+||.+|.+||.+.-+ +.+.|+||||+||++|+.+.|+.||...... .......
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ--QdILqeN 697 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ--QDILQEN 697 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--HHHHhhh
Confidence 9999876543 2356899999999977533 4678999999999999999999999743221 1111111
Q ss_pred hhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1025 ALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+-....-.+|..+ ....+...+|++|+++.-++|....|+..
T Consensus 698 TIlkAtEVqFP~KP----vVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 698 TILKATEVQFPPKP----VVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred chhcceeccCCCCC----ccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 12222222333322 22345789999999999999988877653
No 381
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=8.9e-29 Score=229.63 Aligned_cols=250 Identities=21% Similarity=0.293 Sum_probs=181.6
Q ss_pred CCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe-
Q 042958 816 DFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI- 893 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~- 893 (1075)
+|...++||+|.||+||+|+ +.+++.||+|+++.....+ .......+|+-+++.++|+|||+++++.........++
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldddde-gvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC-CCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 46667889999999999994 5579999999987654332 23567789999999999999999998765443321111
Q ss_pred ec-------CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCce
Q 042958 894 LS-------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNW 966 (1075)
Q Consensus 894 ~~-------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 966 (1075)
.. .....+.++.+..+.++.|+++|+.+.|++ .|.|||+||.|.+++.+|++|++|||+|+.++-+-..+
T Consensus 82 ~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrcy 158 (292)
T KOG0662|consen 82 FCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY 158 (292)
T ss_pred HhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEee
Confidence 11 123456788888999999999999999999 99999999999999999999999999999887766666
Q ss_pred eccccccCccCccccccCC-CCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhh--------hh---hccC--
Q 042958 967 TELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIA--------LD---EMLD-- 1031 (1075)
Q Consensus 967 ~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~--------~~---~~~~-- 1031 (1075)
...+.|..|++|.++.+.+ |+...|+||.||++.|+.. |++-|.+.+-.+ .-...... .. ..-|
T Consensus 159 saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvdd-qlkrif~~lg~p~ed~wps~t~lpdyk 237 (292)
T KOG0662|consen 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEDQWPSMTKLPDYK 237 (292)
T ss_pred eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHH-HHHHHHHHhCCCccccCCccccCCCCc
Confidence 7778899999999998875 7889999999999999997 555554322111 00000000 00 0000
Q ss_pred --CCCCCCCcCcHHH----HHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1032 --PRLPTPSCIVQDK----LISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1032 --~~~~~~~~~~~~~----~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+.++.. ..+... ...=++++.+.+.-+|.+|.++++.++
T Consensus 238 ~yp~ypat-tswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 238 PYPIYPAT-TSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ccCCcccc-chHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 000000 011111 123457888889999999999998875
No 382
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.95 E-value=5.6e-28 Score=267.26 Aligned_cols=250 Identities=23% Similarity=0.307 Sum_probs=179.1
Q ss_pred CCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccchhhee
Q 042958 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHSLAMIL 894 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~l~~~~ 894 (1075)
|++.+.||+|+||.||+|... +++.||||++...... .......+|+..+++++ |||++++++++......+..+-
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 567789999999999999765 5889999998654322 11234567999999998 9999999998876443322211
Q ss_pred cCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc
Q 042958 895 SNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN 965 (1075)
Q Consensus 895 ~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~ 965 (1075)
... .....+++.++..++.|+++|+.|||+. +++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-~ 154 (283)
T cd07830 79 YMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-P 154 (283)
T ss_pred cCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC-C
Confidence 111 0123679999999999999999999999 99999999999999999999999999998765332 2
Q ss_pred eeccccccCccCccccc-cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchh-------------hhhhhhhhccC
Q 042958 966 WTELAGTYGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSL-------------NLNIALDEMLD 1031 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~-------------~~~~~~~~~~~ 1031 (1075)
.....++..|+|||++. +..++.++|+||||+++|||++|+.||........... ...........
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 23456788999999875 44578999999999999999999999864322110000 00000000111
Q ss_pred CCCCCCC-----cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1032 PRLPTPS-----CIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1032 ~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
...+... .........+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 1111000 0001113569999999999999999999999863
No 383
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.95 E-value=9.1e-29 Score=280.92 Aligned_cols=252 Identities=20% Similarity=0.335 Sum_probs=182.0
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc---
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH--- 888 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 888 (1075)
..++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 4578999999999999999999664 6889999998654322 2234667889999999999999999887654432
Q ss_pred --chhheecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 889 --SLAMILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 889 --~l~~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
...++.+..+ ....+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 92 ~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 92 FQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred cccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 1122221111 124588999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhh-------hhhh----
Q 042958 960 KPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLN-------IALD---- 1027 (1075)
Q Consensus 960 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~-------~~~~---- 1027 (1075)
... .....++..|+|||.+.+ ..++.++||||+|+++||+++|+.||.............. ....
T Consensus 169 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (343)
T cd07851 169 DDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS 245 (343)
T ss_pred ccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccc
Confidence 432 233467889999998765 3678999999999999999999999864322110000000 0000
Q ss_pred ----hccCC--CCCCC--CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1028 ----EMLDP--RLPTP--SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1028 ----~~~~~--~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.+... ....+ .......+..+.+++.+|++.||++|||+.||++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 246 ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00000 00000 0000112457899999999999999999999975
No 384
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95 E-value=3.4e-28 Score=269.96 Aligned_cols=244 Identities=22% Similarity=0.279 Sum_probs=179.3
Q ss_pred CCCCCceecccCceEEEEEEE----CCCCEEEEEEccCCCC-CchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccc
Q 042958 816 DFDDEHCIGKGGQGSVYKAEL----ASGEIVAVKKFHSPLP-GEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 889 (1075)
+|++.+.||+|+||.||+|.. .+|+.||+|++..... ......+++..|+++++++ +|++|+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999965 3689999999865322 1222346788999999999 699999999888765432
Q ss_pred hhheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC
Q 042958 890 LAMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 890 l~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
+ ++++... ....+++.+...++.|+++||.|||+. +++||||+|+||+++.++.+||+|||++....
T Consensus 81 ~-lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 H-LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred E-EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 2 2221111 234577888888999999999999999 99999999999999999999999999998754
Q ss_pred CCCC-ceeccccccCccCccccccC--CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 961 PDSS-NWTELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 961 ~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
.... ......|+..|+|||++.+. .++.++||||||+++|+|++|+.||........ .............+.+
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~ 232 (290)
T cd05613 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS----QAEISRRILKSEPPYP 232 (290)
T ss_pred cccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc----HHHHHHHhhccCCCCC
Confidence 4322 22235688999999998753 467899999999999999999999864322111 1111112211111111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRP-----TMPKVSQ 1071 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 1071 (1075)
......+.+++.+||+.||++|| +++++++
T Consensus 233 ----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 233 ----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 22345689999999999999997 6777664
No 385
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.95 E-value=9.1e-29 Score=276.76 Aligned_cols=241 Identities=27% Similarity=0.409 Sum_probs=178.4
Q ss_pred CCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc----c----
Q 042958 818 DDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR----H---- 888 (1075)
Q Consensus 818 ~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~---- 888 (1075)
...+.||+|+||.||+|+ ..+|+.||||.++... ....++...+|++++++++|+|||+++++-.+.. .
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 445779999999999997 5589999999998754 2233577889999999999999999988655433 1
Q ss_pred ---------chhheecCccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeee--CCCC--CceEecccc
Q 042958 889 ---------SLAMILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLL--DFDN--EAHVSDFGI 955 (1075)
Q Consensus 889 ---------~l~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill--~~~~--~~kl~DfGl 955 (1075)
.+.-++........++..+.+.+..+++.||.|||++ +|+||||||.||++ .++| --||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 1222233344556689999999999999999999999 99999999999988 3445 479999999
Q ss_pred ccccCCCCCceeccccccCccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccCccccc-hhh------------
Q 042958 956 AKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSS-SLN------------ 1021 (1075)
Q Consensus 956 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~-~~~------------ 1021 (1075)
|+.+.++ +.....+||..|.+||.... +.|+.-+|.|||||++||.+||..||......... ...
T Consensus 171 Arel~d~-s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~ 249 (732)
T KOG4250|consen 171 ARELDDN-SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVA 249 (732)
T ss_pred cccCCCC-CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCcee
Confidence 9988755 46788999999999999884 77889999999999999999999999755443210 000
Q ss_pred ----hhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCC
Q 042958 1022 ----LNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRP 1064 (1075)
Q Consensus 1022 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 1064 (1075)
......-.....+|.+..........+...+..++.-+|++|-
T Consensus 250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 0000011111233444333344445566677777777777776
No 386
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-29 Score=261.08 Aligned_cols=237 Identities=21% Similarity=0.288 Sum_probs=183.4
Q ss_pred HhcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccch
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l 890 (1075)
...+|....+||+|+||.|..|+ ..+.+.+|||++++...-..+..+--+.|-++++-- +-|.++++...|+..+..
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL- 425 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL- 425 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe-
Confidence 34678889999999999999994 446788999999876543333334456677777766 567788887766554332
Q ss_pred hheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC
Q 042958 891 AMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 891 ~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
+.++++. .+-+.+.+....-+|..||-||-+||++ +|+.||||.+||++|.+|++||+|||+++.---
T Consensus 426 yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccccc
Confidence 2222222 2233456666778999999999999999 999999999999999999999999999987555
Q ss_pred CCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCc
Q 042958 962 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIV 1041 (1075)
Q Consensus 962 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1075)
+.....+.+|||.|+|||.+..++|+.++|.|||||++|||+.|++||++.+. .+....+.+.....|
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE--------~elF~aI~ehnvsyP---- 570 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--------DELFQAIMEHNVSYP---- 570 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHHccCcCc----
Confidence 56667789999999999999999999999999999999999999999985443 334455555555443
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCC
Q 042958 1042 QDKLISIVEVAISCLDENPESRPT 1065 (1075)
Q Consensus 1042 ~~~~~~l~~li~~cl~~dP~~RPs 1065 (1075)
...+.+..++.+..+.+.|.+|.-
T Consensus 571 KslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 571 KSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ccccHHHHHHHHHHhhcCCccccC
Confidence 344456788888999999999863
No 387
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.95 E-value=1.4e-27 Score=261.19 Aligned_cols=240 Identities=20% Similarity=0.288 Sum_probs=175.4
Q ss_pred HHHHHHhcCCCCCcee--cccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEe
Q 042958 808 EEIIRATNDFDDEHCI--GKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFC 883 (1075)
Q Consensus 808 ~e~~~~~~~~~~~~~l--G~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 883 (1075)
.+.....++|++.+.+ |+|+||.||++.. .+++.+|+|.+....... . |+.....+ +||||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~--e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------I--EPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------h--hHHHHHHhhcCCCEEEEEEEE
Confidence 3344455677777776 9999999999954 578999999986432111 1 22222212 799999999998
Q ss_pred eccccchhheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-CceEecc
Q 042958 884 SHVRHSLAMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-EAHVSDF 953 (1075)
Q Consensus 884 ~~~~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Df 953 (1075)
...+..+ ++++.. .....+++.+...++.|+++|+.|||+. +++||||||+||+++.++ .++++||
T Consensus 79 ~~~~~~~-iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 79 TTLKGHV-LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred ecCCeeE-EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 7755432 222211 1234789999999999999999999999 999999999999999998 9999999
Q ss_pred ccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCC
Q 042958 954 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPR 1033 (1075)
Q Consensus 954 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1075)
|.+...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||........ .... ........
T Consensus 155 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~---~~~~-~~~~~~~~ 226 (267)
T PHA03390 155 GLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL---DLES-LLKRQQKK 226 (267)
T ss_pred ccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh---hHHH-HHHhhccc
Confidence 999865432 234688999999999998999999999999999999999999973322111 0111 11111111
Q ss_pred CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHh
Q 042958 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPT-MPKVSQ 1071 (1075)
Q Consensus 1034 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 1071 (1075)
.+ .....+..+.+++.+|++.+|.+||+ ++|+++
T Consensus 227 ~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 227 LP----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred CC----cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 11 12234557999999999999999996 698875
No 388
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.9e-28 Score=270.95 Aligned_cols=231 Identities=21% Similarity=0.246 Sum_probs=176.6
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~ 891 (1075)
++.|.....+|.|+|+.|-++ ...+++..+||++.+.. .+-.+|+.++... +|||++++.+.+.+..+.+.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceeee
Confidence 567777788999999999888 44578999999997652 2233566555555 79999999999987655433
Q ss_pred heecCcccc--------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeee-CCCCCceEeccccccccCCC
Q 042958 892 MILSNNAAA--------KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLL-DFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 892 ~~~~~~~~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill-~~~~~~kl~DfGla~~~~~~ 962 (1075)
+. +...++ .......+..|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|+|||.++.....
T Consensus 394 v~-e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 394 VM-ELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred ee-hhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 32 111111 1122256667999999999999998 99999999999999 68999999999999876654
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcH
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQ 1042 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1075)
....+-|..|.|||+.....|++++|+||+|++||+|++|+.||..-+.. ......+..++.. .
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s------~ 533 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFS------E 533 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccc------c
Confidence 33446688999999999999999999999999999999999999743331 1122222222221 3
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1043 DKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1043 ~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..+....+++.+|++.||.+||+|+|+..
T Consensus 534 ~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 534 CVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 45567999999999999999999999864
No 389
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=1.1e-27 Score=292.65 Aligned_cols=140 Identities=21% Similarity=0.307 Sum_probs=115.7
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
.++|++.+.||+|+||.||+|... +++.||||++.............+..|+.+++.++||||+++++++......+ +
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~-l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVY-L 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEE-E
Confidence 367888999999999999999665 78999999987654444445678899999999999999999998887655432 2
Q ss_pred eecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccc
Q 042958 893 ILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957 (1075)
Q Consensus 893 ~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 957 (1075)
++++.. ....+++...++++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 222221 123467888899999999999999999 99999999999999999999999999986
No 390
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.2e-29 Score=248.10 Aligned_cols=254 Identities=21% Similarity=0.324 Sum_probs=178.6
Q ss_pred hcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc----
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH---- 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 888 (1075)
...|....+||+|.||+||+|+. ++|+.||+|+...... .+.......+|++++..++|+|++.+++.|.....
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene-KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc-ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 34566678899999999999955 4688899987643221 11223456799999999999999999998853211
Q ss_pred ---chhheec--Cc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccc
Q 042958 889 ---SLAMILS--NN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIA 956 (1075)
Q Consensus 889 ---~l~~~~~--~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 956 (1075)
.+++++. +. .....++..++.+++.++..||.|+|+. .|+|||+||.|++++.++.+|++|||++
T Consensus 95 ~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 95 DRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccc
Confidence 1222211 11 1234578889999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC----CceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccc---------------
Q 042958 957 KFLKPDS----SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMS--------------- 1016 (1075)
Q Consensus 957 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~--------------- 1016 (1075)
+.+.... ..++..+.|..|++||.+.+. .|+++.|||..||++.||+|+.+-+.+.....
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 7665332 235567789999999987764 68999999999999999999998876433211
Q ss_pred -cchhhhhhhhhhccCCCCCCCC-cCcHHH------HHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1017 -SSSLNLNIALDEMLDPRLPTPS-CIVQDK------LISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1017 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
+...+.....+.+.-+.++... ....+. ..+..+++.+++..||.+|+++++++.
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 0000000001111001011100 000011 125778999999999999999999875
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.8e-29 Score=264.92 Aligned_cols=236 Identities=23% Similarity=0.342 Sum_probs=186.3
Q ss_pred cCCCCCceecccCceEEEEEEECCCC-EEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe
Q 042958 815 NDFDDEHCIGKGGQGSVYKAELASGE-IVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~~~~~g~-~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~ 893 (1075)
.++.+...+|-|+||.|-.+...... .+|+|.+++...-+..+.+.+..|-.+|...+.|.||++|-.|.+... ++|.
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ky-vYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKY-VYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchh-hhhh
Confidence 44556678999999999998766433 489999988766677778899999999999999999999988876544 3343
Q ss_pred ecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 894 LSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 894 ~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
++.. ...+.++......++..+.+|++|||++ +||+|||||+|.++|.+|.+|+.|||+|+.+.....
T Consensus 499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 3322 2234456666677899999999999999 999999999999999999999999999999886544
Q ss_pred ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHH
Q 042958 965 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDK 1044 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1075)
. -+.+||+.|.|||.+.+..++.++|.||+|+++||+++|.+||...+++........ .++.+-.|+ ..
T Consensus 576 T-wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk-Gid~i~~Pr---------~I 644 (732)
T KOG0614|consen 576 T-WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK-GIDKIEFPR---------RI 644 (732)
T ss_pred e-eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh-hhhhhhccc---------cc
Confidence 4 457999999999999999999999999999999999999999987665543322111 122222221 22
Q ss_pred HHHHHHHHHHccCCCCCCCCC
Q 042958 1045 LISIVEVAISCLDENPESRPT 1065 (1075)
Q Consensus 1045 ~~~l~~li~~cl~~dP~~RPs 1065 (1075)
.....+++++.+..+|.+|--
T Consensus 645 ~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 645 TKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred chhHHHHHHHHHhcCcHhhhc
Confidence 334778999999999999975
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=4.4e-28 Score=230.79 Aligned_cols=195 Identities=25% Similarity=0.389 Sum_probs=153.4
Q ss_pred HHHhcCCCCCceecccCceEEEEEEE-CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeecccc
Q 042958 811 IRATNDFDDEHCIGKGGQGSVYKAEL-ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 811 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 888 (1075)
....++......||+|+||.|-+-++ .+|+..|+|++...... +..++..+|+.+..+- .+|.+|.++|.+.+...
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~--q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS--QEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcCh--HHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 33445555567899999999988855 47999999999865432 2356778888875554 89999999996654433
Q ss_pred -chhheecC----------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccc
Q 042958 889 -SLAMILSN----------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957 (1075)
Q Consensus 889 -~l~~~~~~----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 957 (1075)
...|.... ...+..+++.-.-+||..|.+||.|||++. .|+|||+||+|||++.+|++|+||||.+.
T Consensus 120 vwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 120 VWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccce
Confidence 23332221 234667888888999999999999999985 89999999999999999999999999998
Q ss_pred ccCCCCCceeccccccCccCcccccc----CCCCcccchHhHHHHHHHHHhCCCCCC
Q 042958 958 FLKPDSSNWTELAGTYGYVAPELAYT----MKVTEKCDVYSFGVLALEVIKGKHPRD 1010 (1075)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~s~G~vl~elltg~~p~~ 1010 (1075)
.+.+.-. .+.-+|-..|||||.+.. ..|+.|+||||+|+.+.||.+++.||+
T Consensus 198 ~L~dSiA-kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 198 YLVDSIA-KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred eehhhhH-HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 7764322 222467788999998863 368999999999999999999999987
No 393
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=3.6e-27 Score=268.82 Aligned_cols=249 Identities=25% Similarity=0.391 Sum_probs=194.6
Q ss_pred HHHHHHHhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEee
Q 042958 807 YEEIIRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCS 884 (1075)
Q Consensus 807 ~~e~~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 884 (1075)
++.....++.|++.+.||+|.+|.||++ ..++|+.+|+|+....... .++++.|.++++.. .|||++.++|++.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~----deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE----EEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc----cHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 3444455788899999999999999999 4557999999998754322 46778899999888 7999999999885
Q ss_pred ccc------cchhheecCcc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCce
Q 042958 885 HVR------HSLAMILSNNA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAH 949 (1075)
Q Consensus 885 ~~~------~~l~~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 949 (1075)
... ..++|.+...+ .+..+.|..+..|...+++|+.|||.. .++|||||-.|||++.++.+|
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEE
Confidence 432 23444443332 256688999999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCCceeccccccCccCcccccc-----CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhh
Q 042958 950 VSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNI 1024 (1075)
Q Consensus 950 l~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~ 1024 (1075)
++|||.+......-....+.+||+.|||||++.. ..|+.++|+||+|++..||.-|.+|+-+..+..
T Consensus 164 LvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr-------- 235 (953)
T KOG0587|consen 164 LVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR-------- 235 (953)
T ss_pred EeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh--------
Confidence 9999999887665556667899999999999863 346788999999999999999999976433321
Q ss_pred hhhhccCCCCCCC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1025 ALDEMLDPRLPTP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1025 ~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.-+.-++-|+| ...+..-..++.++|..|+.+|.++||++.++++.
T Consensus 236 --aLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 236 --ALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred --hhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 11111222222 22244556689999999999999999999998763
No 394
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-29 Score=260.49 Aligned_cols=403 Identities=27% Similarity=0.314 Sum_probs=256.0
Q ss_pred CCceeecccCcccccCCCCCCCCCCCcEEEccCcccCCCCCccccccCCcceeeccc-ccccCCCCCCCCCCCCCCEEEc
Q 042958 98 RLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRLSSLNYLALYS-NYLEDLIPPSLGNLSNLDTLHL 176 (1075)
Q Consensus 98 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~L 176 (1075)
.-++++|..|.|+...|.+|+.+++|+.||||+|+|+.+-|.+|.++++|..|.+.+ |+|+++....|.+|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 345666666666655566677777777777777777777777777777777777766 7777777777888888888888
Q ss_pred CCCCCCCCCCccccCccccceEeeeccccccccCCCCcCCCCcCceeccccCCC------------CCCcccccCCCCCC
Q 042958 177 YDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLF------------DSIPSELGNLRSLS 244 (1075)
Q Consensus 177 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~------------~~~~~~~~~l~~L~ 244 (1075)
.-|++.-+..++|..+++|..|.+.+|.+..+-..+|..+..++.+.+..|.+. ...|..++..+-..
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 888887777777888888888888888887444447777888888888777721 22344455555555
Q ss_pred eEeccCCCCCCccCCCCccc-ccccccccccccCcCCCC-cccCCCccCcEEEccCCCCCCCcCCCCCccccccceeccc
Q 042958 245 MLSLGYNKLSGSIPHSLGNL-TNLATLYLYENSLSGSIP-SEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHN 322 (1075)
Q Consensus 245 ~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 322 (1075)
-..+.++++..+-+..|... ..+..=..+.+...++-| ..|..+++|+.|+|++|+|+.+-+.+|.++..+++|+|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 55666666664444444322 222222222333333444 4688888888888888888888888888888888888888
Q ss_pred ccccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCC-ccccCCCcccceeeeccccccccC
Q 042958 323 NSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSI-PSELGNLRSLSMLSLGYNKLSGSI 401 (1075)
Q Consensus 323 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~ 401 (1075)
|+|..+....|.++..|+.|+|.+|+|+...|..|..+.+|.+|.|-.|.+.-.- -.+++. . |..+...|..
T Consensus 308 N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~--W-----lr~~~~~~~~ 380 (498)
T KOG4237|consen 308 NKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGE--W-----LRKKSVVGNP 380 (498)
T ss_pred chHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHH--H-----HhhCCCCCCC
Confidence 8888777778888888888888888888888888888888888888887762110 001110 0 1111111221
Q ss_pred ChhhccCCCCCeEEeecccccc---cccccc---------ccccccceecccccccccCCCCCCccccccccccccCCcc
Q 042958 402 PHSLGNLTNLATLDLYDNSLSG---SIPSEF---------GNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSL 469 (1075)
Q Consensus 402 ~~~~~~l~~L~~L~L~~N~l~~---~~~~~~---------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 469 (1075)
|- +.-..++.+.++++.+.. ..|++. ..++-+.+..=-.|+....+|..+. ..-.+||+.+|.+
T Consensus 381 ~C--q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP--~d~telyl~gn~~ 456 (498)
T KOG4237|consen 381 RC--QSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIP--VDVTELYLDGNAI 456 (498)
T ss_pred CC--CCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCCC--chhHHHhcccchh
Confidence 11 111234444444443321 111111 1233344433333444345555443 2456777777777
Q ss_pred ccCCCccccCcCCCCEEeCCCCcccCCCcccccCCCccceeeccCC
Q 042958 470 SGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNN 515 (1075)
Q Consensus 470 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 515 (1075)
+ .+|.+ .+++| .+|+++|+++......|.++++|..|-|+.|
T Consensus 457 ~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 457 T-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred c-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 7 56665 55666 7777777777555566666666666666654
No 395
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-28 Score=253.28 Aligned_cols=257 Identities=19% Similarity=0.289 Sum_probs=185.7
Q ss_pred ccHHHHHHHhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-c-C----cee
Q 042958 805 IVYEEIIRATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-H-R----NIV 877 (1075)
Q Consensus 805 ~~~~e~~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv 877 (1075)
+.++.--..+.+|.+...+|+|.||.|.++ +..++..||||+++.- ..+.+..+-|+++++++. + | -+|
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv 154 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCV 154 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEE
Confidence 333333344789999999999999999999 5556899999999743 334567788999999993 2 2 277
Q ss_pred eEEEEeeccccchhhe-ecC--------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC----
Q 042958 878 KFYGFCSHVRHSLAMI-LSN--------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF---- 944 (1075)
Q Consensus 878 ~l~~~~~~~~~~l~~~-~~~--------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---- 944 (1075)
.+.+||...++...++ +.+ ...-.+++....+.|++|++++++|||+. +++|-||||+||++..
T Consensus 155 ~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 155 QMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred eeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceE
Confidence 8878776655542222 111 12345678899999999999999999999 9999999999999942
Q ss_pred ----------------CCCceEeccccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCC
Q 042958 945 ----------------DNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 1008 (1075)
Q Consensus 945 ----------------~~~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p 1008 (1075)
...+||+|||.|++-... ....+.|..|+|||++.+-+++.++||||+||+++|+.+|..-
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~L 308 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETL 308 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcCCccCceeeeeEEEEeecccee
Confidence 235899999999875433 3567889999999999999999999999999999999999998
Q ss_pred CCccCccccc-----------hhhhhhh-hhhcc-CCCCC-----------------CC----CcCcHHHHHHHHHHHHH
Q 042958 1009 RDFISSMSSS-----------SLNLNIA-LDEML-DPRLP-----------------TP----SCIVQDKLISIVEVAIS 1054 (1075)
Q Consensus 1009 ~~~~~~~~~~-----------~~~~~~~-~~~~~-~~~~~-----------------~~----~~~~~~~~~~l~~li~~ 1054 (1075)
|+.-+..+.- ....... .+++. ..++. .+ ......+..++.+++++
T Consensus 309 FqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~ 388 (415)
T KOG0671|consen 309 FQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR 388 (415)
T ss_pred cccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence 8644422100 0000000 00000 00000 00 01223455689999999
Q ss_pred ccCCCCCCCCCHHHHHh
Q 042958 1055 CLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1055 cl~~dP~~RPs~~evl~ 1071 (1075)
|+..||.+|+|+.|++.
T Consensus 389 mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 389 MLEFDPARRITLREALS 405 (415)
T ss_pred HHccCccccccHHHHhc
Confidence 99999999999999875
No 396
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-28 Score=256.64 Aligned_cols=421 Identities=26% Similarity=0.286 Sum_probs=254.7
Q ss_pred EEcCCCCCCCCCCccccCccccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccC-CC
Q 042958 174 LHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGY-NK 252 (1075)
Q Consensus 174 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~ 252 (1075)
.+-++-.++ .+|..+. +.-..++|..|+|+.+.|.+|+.+++|+.|+|++|.|+.+-|.+|.++.+|..|-+-+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 344444444 2443332 3456777888888877777888888888888888888777778888877776665544 78
Q ss_pred CCCccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCCCcc
Q 042958 253 LSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSE 332 (1075)
Q Consensus 253 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 332 (1075)
|+....+.|+++..|+.|.+.-|++..+..++|..+++|..|.+-+|.+..+...+|..+..++.+.+..|.+..
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic----- 202 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC----- 202 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----
Confidence 876666677788888888888888877667778888888888888888775555577778888888777777321
Q ss_pred cccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCccccCC-Ccccc-eeeeccccccccCC-hhhccCC
Q 042958 333 IGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGN-LRSLS-MLSLGYNKLSGSIP-HSLGNLT 409 (1075)
Q Consensus 333 ~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~-~L~Ls~N~l~~~~~-~~~~~l~ 409 (1075)
..+++.+.... ...|..++...-.....+.++++..+.+..|.. ++++. .+....+.. ++-| ..|..++
T Consensus 203 dCnL~wla~~~-------a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d-~~cP~~cf~~L~ 274 (498)
T KOG4237|consen 203 DCNLPWLADDL-------AMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPD-SICPAKCFKKLP 274 (498)
T ss_pred ccccchhhhHH-------hhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcC-CcChHHHHhhcc
Confidence 11122111110 012223333333444444555554443333322 12222 122222222 2333 4577777
Q ss_pred CCCeEEeeccccccccccccccccccceecccccccccCCCCCCccccccccccccCCccccCCCccccCcCCCCEEeCC
Q 042958 410 NLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALN 489 (1075)
Q Consensus 410 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 489 (1075)
+|+.|+|++|+|+++.+.+|.++..+++|.|..|+|...-...|.++..|+.|+|++|+|+...|+.|..+.+|.+|.|-
T Consensus 275 ~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~ 354 (498)
T KOG4237|consen 275 NLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLL 354 (498)
T ss_pred cceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehc
Confidence 77777777777777777777777777777777777765555667777777777777777777777777777777777777
Q ss_pred CCcccCC-Ccccc---------------cCCCccceeeccCCCCCC---CCCccccCccccccccccccccccccCCc--
Q 042958 490 NNKLSGS-IPQSL---------------GNLSNLVILYLYNNSLFD---SIPSELGNLRSLSMLSFAYNKLSGSIPHS-- 548 (1075)
Q Consensus 490 ~N~l~~~-~~~~~---------------~~l~~L~~L~L~~N~l~~---~~~~~l~~l~~L~~L~l~~N~l~~~~p~~-- 548 (1075)
.|++..- --.++ +.-..++.+.++++.+.+ ..|++.+..+ ++..|+.
T Consensus 355 ~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~------------s~~cP~~c~ 422 (498)
T KOG4237|consen 355 SNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLT------------SSPCPPPCT 422 (498)
T ss_pred cCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCC------------CCCCCCCcc
Confidence 7765421 00011 111234444555444322 1222222111 1123332
Q ss_pred -c-cccccCCCccccccchhhhhhhHhHHHhhcccccccccccccCcccccceeecCCCcccCcccccccccccceEEEc
Q 042958 549 -L-GVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNL 626 (1075)
Q Consensus 549 -l-~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 626 (1075)
+ ++..-|++.+. .+|..+- ...++|.+.+|+++ .+|.. .+..| .+|||+|+|+..-.-.|.++++|.+|-|
T Consensus 423 c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlil 495 (498)
T KOG4237|consen 423 CLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLIL 495 (498)
T ss_pred hhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEE
Confidence 1 23344555554 3333322 23567888888888 44554 56777 8899999998666678889999999988
Q ss_pred ccc
Q 042958 627 SNN 629 (1075)
Q Consensus 627 s~N 629 (1075)
|+|
T Consensus 496 syn 498 (498)
T KOG4237|consen 496 SYN 498 (498)
T ss_pred ecC
Confidence 886
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.4e-28 Score=238.26 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=181.4
Q ss_pred CCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe--
Q 042958 817 FDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-- 893 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~-- 893 (1075)
.+..+.||-|+||.||.+ +-++|+.||+|++.... ......+.+.+|++++..++|.||+..++.-......+...
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 344578999999999999 45689999999986543 22334578899999999999999999887654433221111
Q ss_pred -----ec-----CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC
Q 042958 894 -----LS-----NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 894 -----~~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~ 963 (1075)
+. -......++-....-+.+||++||+|||+. +|.||||||.|.+++.+..+||||||+|+....+.
T Consensus 134 V~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 134 VLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchhh
Confidence 10 112345577777888999999999999999 99999999999999999999999999999866554
Q ss_pred C-ceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccch---------------hhhhhhh
Q 042958 964 S-NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSS---------------LNLNIAL 1026 (1075)
Q Consensus 964 ~-~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~---------------~~~~~~~ 1026 (1075)
. .++..+.|..|+|||.+.+. .|+.+.||||.||++.|++..+.-|....+.+... ...+...
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk 290 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK 290 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence 3 46667889999999999876 58999999999999999999888876443332100 0011111
Q ss_pred hhccCCCCCCCC-------cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1027 DEMLDPRLPTPS-------CIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1027 ~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
..+.......|. ....+...+...+..+++..||++|.+.++.+..
T Consensus 291 ~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 291 NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 111111111110 1111223356678888999999999998887643
No 398
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-27 Score=277.02 Aligned_cols=247 Identities=22% Similarity=0.237 Sum_probs=188.0
Q ss_pred HHHHHhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccc
Q 042958 809 EIIRATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVR 887 (1075)
Q Consensus 809 e~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 887 (1075)
++.-..++|.+.++||+|+||.|..++++ +++.||+|++.+...-......-|..|..+|..-..+=|+.+.-.|.+.+
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 44455689999999999999999999664 78999999997632222222456889999999888888999876666654
Q ss_pred cchhheecCcccc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 888 HSLAMILSNNAAA---------KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 888 ~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
+ +++++.++.++ ..++....+.++..|.-||.-+|+. |+|||||||+|||+|..|++|++|||.+-.
T Consensus 149 ~-LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 149 Y-LYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred c-eEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHh
Confidence 4 44444443332 2477888888999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCc-eeccccccCccCcccccc-----CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCC
Q 042958 959 LKPDSSN-WTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDP 1032 (1075)
Q Consensus 959 ~~~~~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1075)
+..++.. ....+|||.|++||++.. +.|++..|.||+||++|||+.|..||...+- ......+++-
T Consensus 225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl--------veTY~KIm~h 296 (1317)
T KOG0612|consen 225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL--------VETYGKIMNH 296 (1317)
T ss_pred cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH--------HHHHHHHhch
Confidence 8866553 455789999999998862 5688999999999999999999999973222 1222233322
Q ss_pred --CCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCC---HHHHH
Q 042958 1033 --RLPTPSCIVQDKLISIVEVAISCLDENPESRPT---MPKVS 1070 (1075)
Q Consensus 1033 --~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl 1070 (1075)
.+..| ...+.+.+..++|.+.+. +|+.|.. ++|+.
T Consensus 297 k~~l~FP--~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 297 KESLSFP--DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred hhhcCCC--cccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 22222 123356678899988876 6788877 66664
No 399
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=2.3e-26 Score=246.72 Aligned_cols=210 Identities=19% Similarity=0.200 Sum_probs=158.3
Q ss_pred cCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc------
Q 042958 826 GGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA------ 898 (1075)
Q Consensus 826 G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~------ 898 (1075)
|.||.||++. ..+++.||+|++.... .+..|...+....||||+++++++......+ ++++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVF-LVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEE-EEEecCCCCCHHH
Confidence 8999999994 4578999999986531 2334555556667999999999887654432 2222111
Q ss_pred ---ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccccccCc
Q 042958 899 ---AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGY 975 (1075)
Q Consensus 899 ---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~y 975 (1075)
....+++.....++.|+++|++|+|+. +|+||||||+||+++.++.++++|||.+...... .....++..|
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y 148 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMY 148 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccc
Confidence 123478899999999999999999999 9999999999999999999999999988765432 2233457789
Q ss_pred cCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHc
Q 042958 976 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISC 1055 (1075)
Q Consensus 976 ~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 1055 (1075)
+|||...+..++.++||||+|+++|||++|+.|++..... .........+ ......+.+++.+|
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~------~~~~~~~~~li~~~ 212 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIP------EWVSEEARSLLQQL 212 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCc------ccCCHHHHHHHHHH
Confidence 9999998888999999999999999999999887532110 0000001111 12334689999999
Q ss_pred cCCCCCCCCCH
Q 042958 1056 LDENPESRPTM 1066 (1075)
Q Consensus 1056 l~~dP~~RPs~ 1066 (1075)
++.||++||++
T Consensus 213 l~~dp~~R~~~ 223 (237)
T cd05576 213 LQFNPTERLGA 223 (237)
T ss_pred ccCCHHHhcCC
Confidence 99999999997
No 400
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=3.2e-26 Score=272.18 Aligned_cols=253 Identities=19% Similarity=0.202 Sum_probs=148.7
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-C----CCEEEEEEccCCCCCchhHHHHHHHH-----HHHHhcC-------CcCc
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-S----GEIVAVKKFHSPLPGEMTFQQEFLNE-----VKALTEI-------RHRN 875 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~~~~~E-----~~~l~~l-------~h~n 875 (1075)
..++|+..+.||+|+||.||+|... + +..||||++......+....+.+... ......+ ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence 5678999999999999999999664 4 78999998764321111111111000 0000000 0111
Q ss_pred eeeEEEEeeccccchhheecCc-----------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCC
Q 042958 876 IVKFYGFCSHVRHSLAMILSNN-----------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSK 938 (1075)
Q Consensus 876 iv~l~~~~~~~~~~l~~~~~~~-----------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 938 (1075)
+.-++.|+... .+..++... .............++.|++.||+|||+. +|+||||||+
T Consensus 210 ~~LV~ey~~~g--sL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~ 284 (566)
T PLN03225 210 YWLVWRYEGES--TLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQ 284 (566)
T ss_pred eEEEEEecCCC--cHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHH
Confidence 22223332211 111111100 0001112334567999999999999999 9999999999
Q ss_pred CeeeCC-CCCceEeccccccccCCCC-CceeccccccCccCccccccC----------------------CCCcccchHh
Q 042958 939 NVLLDF-DNEAHVSDFGIAKFLKPDS-SNWTELAGTYGYVAPELAYTM----------------------KVTEKCDVYS 994 (1075)
Q Consensus 939 Nill~~-~~~~kl~DfGla~~~~~~~-~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dv~s 994 (1075)
|||++. ++.+||+|||+|+.+.... .......+++.|+|||.+... .++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999986 5799999999998654332 223456789999999965322 2345679999
Q ss_pred HHHHHHHHHhCCCCCCccCcc-----ccchhhhhhhhhhccCCCCCCC----CcCcHHHHHHHHHHHHHccCCCCCCCCC
Q 042958 995 FGVLALEVIKGKHPRDFISSM-----SSSSLNLNIALDEMLDPRLPTP----SCIVQDKLISIVEVAISCLDENPESRPT 1065 (1075)
Q Consensus 995 ~G~vl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs 1065 (1075)
+||++|||+++..|++..... ....... ........+..... ............+++.+|+++||++|||
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t 443 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDL-VAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS 443 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcH-HHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence 999999999987775421000 0000000 00111111111000 0000011123558999999999999999
Q ss_pred HHHHHh
Q 042958 1066 MPKVSQ 1071 (1075)
Q Consensus 1066 ~~evl~ 1071 (1075)
++|+++
T Consensus 444 a~e~L~ 449 (566)
T PLN03225 444 AKAALA 449 (566)
T ss_pred HHHHhC
Confidence 999986
No 401
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.93 E-value=7.1e-26 Score=243.97 Aligned_cols=231 Identities=27% Similarity=0.410 Sum_probs=174.8
Q ss_pred CceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhhe-ecCc-------
Q 042958 827 GQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMI-LSNN------- 897 (1075)
Q Consensus 827 ~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~-~~~~------- 897 (1075)
+||.||+|... +|+.||+|++........ .+.+.+|++.+++++|+||+++++++.........+ ....
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999776 589999999876433221 578999999999999999999999887643322221 1111
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccccccCccC
Q 042958 898 AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 977 (1075)
Q Consensus 898 ~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~y~a 977 (1075)
.....+++..+..++.++++|+.|||+. +++|+||+|+||+++.++.++++|||.+....... ......++..|+|
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~ 154 (244)
T smart00220 79 KKRGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMA 154 (244)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCC
Confidence 0112278899999999999999999999 99999999999999999999999999998765432 3344568889999
Q ss_pred ccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccC
Q 042958 978 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLD 1057 (1075)
Q Consensus 978 PE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 1057 (1075)
||...+..++.++||||+|+++|++++|..||...... ....+........... .....+.++.+++.+|+.
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~ 226 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-------LELFKKIGKPKPPFPP-PEWKISPEAKDLIRKLLV 226 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-------HHHHHHHhccCCCCcc-ccccCCHHHHHHHHHHcc
Confidence 99998888999999999999999999999998642111 1111112111111110 000133469999999999
Q ss_pred CCCCCCCCHHHHHh
Q 042958 1058 ENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1058 ~dP~~RPs~~evl~ 1071 (1075)
.+|++||++.|+++
T Consensus 227 ~~p~~Rp~~~~~~~ 240 (244)
T smart00220 227 KDPEKRLTAEEALQ 240 (244)
T ss_pred CCchhccCHHHHhh
Confidence 99999999999986
No 402
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.93 E-value=5.6e-27 Score=266.00 Aligned_cols=233 Identities=25% Similarity=0.401 Sum_probs=167.6
Q ss_pred CCCCceecccCceE-EEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchhhe-
Q 042958 817 FDDEHCIGKGGQGS-VYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLAMI- 893 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~~~- 893 (1075)
|...+++|.|+.|+ ||+|... |+.||||++-.. ...-..+|+..++.- .|||||++++.-.+....+..+
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 44456799999875 6899887 899999998532 234567899999888 7999999987665544432211
Q ss_pred ---------ecCc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC---C--CCceEeccccccc
Q 042958 894 ---------LSNN-AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF---D--NEAHVSDFGIAKF 958 (1075)
Q Consensus 894 ---------~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~--~~~kl~DfGla~~ 958 (1075)
.+.. .......-...+.+..|+++|++|||+. +||||||||.|||++. + .+++|+|||+++.
T Consensus 584 LC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 584 LCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred HhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 1111 0000011133467889999999999998 9999999999999986 3 3799999999999
Q ss_pred cCCCCCce---eccccccCccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCC
Q 042958 959 LKPDSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRL 1034 (1075)
Q Consensus 959 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1075)
+..+.... ....||.+|+|||++....-+.++||||+|||+|+.++ |.+||...-.. + ..++....
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R-------~---~NIl~~~~ 730 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER-------Q---ANILTGNY 730 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh-------h---hhhhcCcc
Confidence 88765433 34679999999999999888899999999999999998 59999732111 0 11111110
Q ss_pred CCC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1035 PTP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1035 ~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.-. -....++ +..++|.+|+++||..||+|.+|+.
T Consensus 731 ~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 731 TLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 000 0011112 6889999999999999999999974
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2e-25 Score=238.58 Aligned_cols=124 Identities=23% Similarity=0.421 Sum_probs=99.6
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-----c---CceeeEEEEee
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-----H---RNIVKFYGFCS 884 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~ 884 (1075)
..+|.+.++||.|.|++||.| +..+.+.||+|+.+. ...+.+....||++|++++ | .+||+++++|.
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS----AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS----AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh----hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 467889999999999999999 666789999999874 3445677889999999983 2 47999999997
Q ss_pred cccc---chhheecCcc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeC
Q 042958 885 HVRH---SLAMILSNNA----------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLD 943 (1075)
Q Consensus 885 ~~~~---~l~~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 943 (1075)
..+. .++|+++..+ .-+.++.....+|++||+.||.|||++| +|||.||||+|||+.
T Consensus 153 hsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 153 HSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred ecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 6432 2444433221 2234678888999999999999999998 999999999999994
No 404
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.93 E-value=4.3e-25 Score=255.17 Aligned_cols=254 Identities=16% Similarity=0.193 Sum_probs=164.3
Q ss_pred HhcCCCCCceecccCceEEEEEEE-----------------CCCCEEEEEEccCCCCCch-----------hHHHHHHHH
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAEL-----------------ASGEIVAVKKFHSPLPGEM-----------TFQQEFLNE 864 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~-----------~~~~~~~~E 864 (1075)
..++|++.++||+|+||.||+|.. ..++.||||++........ ...+.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999953 2356899999865322110 011224457
Q ss_pred HHHHhcCCcCce-----eeEEEEeecc---------ccchhheecCc-------------------------------cc
Q 042958 865 VKALTEIRHRNI-----VKFYGFCSHV---------RHSLAMILSNN-------------------------------AA 899 (1075)
Q Consensus 865 ~~~l~~l~h~ni-----v~l~~~~~~~---------~~~l~~~~~~~-------------------------------~~ 899 (1075)
+.++.+++|.++ +++++||... ...+++.+... ..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 6677776432 11111111000 01
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc-eeccccccCccCc
Q 042958 900 AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN-WTELAGTYGYVAP 978 (1075)
Q Consensus 900 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~gt~~y~aP 978 (1075)
...++|..+..++.|+++|+.|+|+. +|+||||||+||+++.++.+||+|||+++.+...... .....+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12346778889999999999999999 9999999999999999999999999999765433211 1123347899999
Q ss_pred cccccCC----------------------CCcccchHhHHHHHHHHHhCCC-CCCccCccccchhhhhhh---hhhccCC
Q 042958 979 ELAYTMK----------------------VTEKCDVYSFGVLALEVIKGKH-PRDFISSMSSSSLNLNIA---LDEMLDP 1032 (1075)
Q Consensus 979 E~~~~~~----------------------~~~~~Dv~s~G~vl~elltg~~-p~~~~~~~~~~~~~~~~~---~~~~~~~ 1032 (1075)
|.+.... ...+.||||+||++|||++|.. |+................ .......
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 9875322 1234699999999999999885 665322111100000000 1111111
Q ss_pred CCCCCCcCcHHHHHHHHHHHHHccCCCC---CCCCCHHHHHh
Q 042958 1033 RLPTPSCIVQDKLISIVEVAISCLDENP---ESRPTMPKVSQ 1071 (1075)
Q Consensus 1033 ~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 1071 (1075)
.... ...........+++.+++.++| .+|+|++|+++
T Consensus 460 ~~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 460 KYDF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred CCCc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 1111 1122334568899999999766 68999999985
No 405
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=1.1e-25 Score=217.55 Aligned_cols=249 Identities=18% Similarity=0.281 Sum_probs=180.9
Q ss_pred HhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccch
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~l 890 (1075)
..++|++.+++|+|-|++||.| ...+.+.++||+++.- ..+.+.+|+.++..+. ||||+++++...++....
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 3578899999999999999999 5667899999998642 2578899999999995 999999999887765442
Q ss_pred hheecCccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-CceEeccccccccCCC
Q 042958 891 AMILSNNAA-------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-EAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 891 ~~~~~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~ 962 (1075)
.....+.-. -..++...++..+.+++.||.|+|+. ||.|||+||.|+++|... .++++|+|+|.++.+.
T Consensus 110 paLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred chhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 222222111 12355667788999999999999999 999999999999999765 7999999999998865
Q ss_pred CCceeccccccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCc-cc----cchh---------------h
Q 042958 963 SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISS-MS----SSSL---------------N 1021 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~-~~----~~~~---------------~ 1021 (1075)
. .+.-.+.+..|.-||.+... .|+..-|+|||||++.+|+..+.||-.-.+ .+ .... .
T Consensus 187 ~-eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~ 265 (338)
T KOG0668|consen 187 K-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID 265 (338)
T ss_pred c-eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence 3 34455678889999987654 578899999999999999999999742211 10 0000 0
Q ss_pred hhhhhhhccCCCCCCCC------cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1022 LNIALDEMLDPRLPTPS------CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1022 ~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..-....++......+. +...-..++..+++.+.+..|-.+|||++|.+.
T Consensus 266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 00001111111000000 000112357889999999999999999999864
No 406
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=2.1e-25 Score=243.64 Aligned_cols=204 Identities=23% Similarity=0.311 Sum_probs=161.2
Q ss_pred HHHHHHHh---cCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEE
Q 042958 807 YEEIIRAT---NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGF 882 (1075)
Q Consensus 807 ~~e~~~~~---~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 882 (1075)
|..+.++. .-|...+.||-|+||+|..+ +.++...||.|.+++...-...+...++.|..||+.-..+-||++|-.
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 33444443 45777889999999999999 555678899999987554455566788999999999999999999977
Q ss_pred eeccccchhheecCcccc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecc
Q 042958 883 CSHVRHSLAMILSNNAAA---------KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953 (1075)
Q Consensus 883 ~~~~~~~l~~~~~~~~~~---------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 953 (1075)
|.+.+. +++++.+..++ +.+.+...+.++..++.|+++.|.. |+|||||||+|||||.+|++||+||
T Consensus 698 FQDkdn-LYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 698 FQDKDN-LYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred eccCCc-eEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeec
Confidence 776544 44444444333 3355666677888999999999999 9999999999999999999999999
Q ss_pred ccccccC---------CCCC----------c-----------------------eeccccccCccCccccccCCCCcccc
Q 042958 954 GIAKFLK---------PDSS----------N-----------------------WTELAGTYGYVAPELAYTMKVTEKCD 991 (1075)
Q Consensus 954 Gla~~~~---------~~~~----------~-----------------------~~~~~gt~~y~aPE~~~~~~~~~~~D 991 (1075)
|++.-+. ..+. . ....+||+.|+|||++....|+...|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9985332 1000 0 01246999999999999999999999
Q ss_pred hHhHHHHHHHHHhCCCCCCccCc
Q 042958 992 VYSFGVLALEVIKGKHPRDFISS 1014 (1075)
Q Consensus 992 v~s~G~vl~elltg~~p~~~~~~ 1014 (1075)
.||.|||||||+.|+.||.....
T Consensus 854 wws~gvil~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTP 876 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCC
Confidence 99999999999999999975444
No 407
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.92 E-value=4.3e-25 Score=224.82 Aligned_cols=251 Identities=22% Similarity=0.288 Sum_probs=182.4
Q ss_pred cCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc----
Q 042958 815 NDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS---- 889 (1075)
Q Consensus 815 ~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 889 (1075)
.+|.-...+|.|+- .|..| +.-.+++||+|+...+... ....++..+|...+..+.|+|+++++.++...+..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 45666677888888 66666 4446899999998877444 33346677999999999999999999988654322
Q ss_pred ---hhheecCccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCC
Q 042958 890 ---LAMILSNNAA----AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPD 962 (1075)
Q Consensus 890 ---l~~~~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~ 962 (1075)
+.+.+..... ...++..+...+.+|++.|++|||+. +|+||||||+||++..+..+||.|||+|+....+
T Consensus 95 e~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 95 EVYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hHHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCcc
Confidence 2222222111 13456777889999999999999999 9999999999999999999999999999875543
Q ss_pred CCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccc----------hh----hhh-----
Q 042958 963 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSS----------SL----NLN----- 1023 (1075)
Q Consensus 963 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~----------~~----~~~----- 1023 (1075)
-..+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.+....+.. .. +..
T Consensus 172 -~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~ 250 (369)
T KOG0665|consen 172 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRN 250 (369)
T ss_pred -cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHH
Confidence 2455678899999999999999999999999999999999999887643222100 00 000
Q ss_pred ----------hhh-hhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1024 ----------IAL-DEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1024 ----------~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
... +-+-|..++.......-......+++.+|+..||++|.+++++++
T Consensus 251 yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 251 YVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000 001111112211112223446889999999999999999999975
No 408
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=8.5e-24 Score=273.05 Aligned_cols=363 Identities=23% Similarity=0.326 Sum_probs=235.9
Q ss_pred ceeEEEeccccccc-ccCCcccCCCCCccEEEccCCC------ccCCCCccccccC-CCceeecccCcccccCCCCCCCC
Q 042958 49 RVNSINLTSIGLKG-MLHDFSFSSFPHLAYLDLWHNQ------LYGNIPPQIGNIS-RLKYLDLSSNLFFGTIPPEIGHL 120 (1075)
Q Consensus 49 ~v~~l~l~~~~l~g-~~~~~~~~~l~~L~~L~L~~n~------l~~~~p~~l~~l~-~L~~L~Ls~n~l~~~~p~~l~~l 120 (1075)
.|..+.+.-..... .++...|.++++|++|.+..+. +...+|..+..++ +|+.|++.++.+. .+|..+ ..
T Consensus 533 ~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~ 610 (1153)
T PLN03210 533 KVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RP 610 (1153)
T ss_pred eeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-Cc
Confidence 45554443322221 2444568888999999887653 3345777777765 5888888888876 777777 56
Q ss_pred CCCcEEEccCcccCCCCCccccccCCcceeecccccccCCCCCCCCCCCCCCEEEcCCCCCCCCCCccccCccccceEee
Q 042958 121 SYLKTLQLFENQLNGSIPYEIGRLSSLNYLALYSNYLEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSL 200 (1075)
Q Consensus 121 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 200 (1075)
.+|++|+|++|++. .+|..+..+++|++|+|+++.....+| .++.+++|++|+|++|.....+|..++++++|+.|++
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L 688 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM 688 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeC
Confidence 88888888888877 567777777778888877765444444 3667777777777777655566777777777777777
Q ss_pred eccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCCCCcccccccccccccccCcCC
Q 042958 201 GYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGS 280 (1075)
Q Consensus 201 s~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 280 (1075)
++|.....+|..+ ++++|+.|++++|.....+|.. .++|+.|++++|.+. .+|..+ .+++|++|++.++....
T Consensus 689 ~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~- 761 (1153)
T PLN03210 689 SRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEK- 761 (1153)
T ss_pred CCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhh-
Confidence 7764433555544 5667777777766544444432 345666666666665 344433 34555555555432211
Q ss_pred CCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCCCcccccccccccccccCCcccccCCCcCCCC
Q 042958 281 IPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYL 360 (1075)
Q Consensus 281 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l 360 (1075)
++. .+....+..+...++|+.|+|++|.....+|..++++++|+.|++++|...+.+|..+ .+
T Consensus 762 l~~----------------~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L 824 (1153)
T PLN03210 762 LWE----------------RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NL 824 (1153)
T ss_pred ccc----------------cccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-Cc
Confidence 110 1111112222334567777777776666677777777777777777765433566555 57
Q ss_pred CCcceeeccccccCCCCccccCCCcccceeeeccccccccCChhhccCCCCCeEEeec-cccccccccccccccccceec
Q 042958 361 SNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYD-NSLSGSIPSEFGNLRSLSTLS 439 (1075)
Q Consensus 361 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 439 (1075)
++|+.|++++|.....+|.. ..+|++|+|++|.+. .+|.++..+++|+.|+|++ |+++ .+|..+..+++|+.|+
T Consensus 825 ~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~ 899 (1153)
T PLN03210 825 ESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVD 899 (1153)
T ss_pred cccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeee
Confidence 77888888887655555543 357888888888886 6788888889999999988 4555 4666778888888888
Q ss_pred ccccc
Q 042958 440 LGYNK 444 (1075)
Q Consensus 440 L~~N~ 444 (1075)
+++|.
T Consensus 900 l~~C~ 904 (1153)
T PLN03210 900 FSDCG 904 (1153)
T ss_pred cCCCc
Confidence 88773
No 409
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.91 E-value=2.5e-25 Score=241.62 Aligned_cols=195 Identities=22% Similarity=0.321 Sum_probs=157.5
Q ss_pred HHHhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHH-----HHHHHHHHHHhcCC---cCceeeEEE
Q 042958 811 IRATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQ-----QEFLNEVKALTEIR---HRNIVKFYG 881 (1075)
Q Consensus 811 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~-----~~~~~E~~~l~~l~---h~niv~l~~ 881 (1075)
.....+|+..+.+|+|+||.|+.|.++ +...|+||.+.+.+.-...+. -.+-.|+++|+.++ |+||+++++
T Consensus 557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLd 636 (772)
T KOG1152|consen 557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLD 636 (772)
T ss_pred ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhh
Confidence 344567899999999999999999665 567899999876543211111 12567999999997 999999999
Q ss_pred EeeccccchhheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEec
Q 042958 882 FCSHVRHSLAMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSD 952 (1075)
Q Consensus 882 ~~~~~~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 952 (1075)
+|++.+.++...-... .-...+++.+...|++||+.|++|||+. +|||||||-+||.++.+|-+|++|
T Consensus 637 fFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 637 FFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred eeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEee
Confidence 9998765433321111 1234467888889999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCceeccccccCccCccccccCCCC-cccchHhHHHHHHHHHhCCCCCC
Q 042958 953 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRD 1010 (1075)
Q Consensus 953 fGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~vl~elltg~~p~~ 1010 (1075)
||.|..... ......+||..|.|||++.+.+|- ..-|||++|+++|.++....||.
T Consensus 714 fgsaa~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999987543 446678999999999999999885 56799999999999999988874
No 410
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.3e-23 Score=271.22 Aligned_cols=306 Identities=25% Similarity=0.289 Sum_probs=145.5
Q ss_pred cCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEccC
Q 042958 219 LATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGY 298 (1075)
Q Consensus 219 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 298 (1075)
|+.|++.++.+. .+|..| ...+|+.|++++|++. .++..+..+++|+.|+|+++.....+| .+..+++|+.|+|++
T Consensus 591 Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~ 666 (1153)
T PLN03210 591 LRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSD 666 (1153)
T ss_pred cEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecC
Confidence 444444444443 233333 2344444444444444 334444444444444444433222333 244444444444444
Q ss_pred CCCCCCcCCCCCccccccceecccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCc
Q 042958 299 NKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIP 378 (1075)
Q Consensus 299 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 378 (1075)
|.....+|..+..+++|+.|++++|.....+|..+ ++++|+.|++++|.....+|.. ..+|++|++++|.+ ..+|
T Consensus 667 c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i-~~lP 741 (1153)
T PLN03210 667 CSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAI-EEFP 741 (1153)
T ss_pred CCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCcc-cccc
Confidence 43333444444444445555544433222333332 3444555555544332233321 23444555555554 2333
Q ss_pred cccCCCcccceeeeccccc-------cccCChhhccCCCCCeEEeeccccccccccccccccccceecccccccccCCCC
Q 042958 379 SELGNLRSLSMLSLGYNKL-------SGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPH 451 (1075)
Q Consensus 379 ~~~~~l~~L~~L~Ls~N~l-------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 451 (1075)
..+ .+++|++|++.++.. ....+..+...++|+.|+|++|.....+|..++++++|+.|+|++|...+.+|.
T Consensus 742 ~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~ 820 (1153)
T PLN03210 742 SNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPT 820 (1153)
T ss_pred ccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCC
Confidence 332 344444444444221 111111222234566666666655445566666666666666666543334554
Q ss_pred CCccccccccccccCCccccCCCccccCcCCCCEEeCCCCcccCCCcccccCCCccceeeccCCCCCCCCCccccCcccc
Q 042958 452 SLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSIPSELGNLRSL 531 (1075)
Q Consensus 452 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 531 (1075)
.+ ++++|+.|++++|.....+|.. ..+|+.|+|++|.++ .+|.++..+++|+.|+|++|.-...+|..+..+++|
T Consensus 821 ~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L 895 (1153)
T PLN03210 821 GI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHL 895 (1153)
T ss_pred CC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCC
Confidence 44 4566666666665443344432 245666666666665 456666666666666666633333455556666666
Q ss_pred cccccccc
Q 042958 532 SMLSFAYN 539 (1075)
Q Consensus 532 ~~L~l~~N 539 (1075)
+.++++++
T Consensus 896 ~~L~l~~C 903 (1153)
T PLN03210 896 ETVDFSDC 903 (1153)
T ss_pred CeeecCCC
Confidence 66666655
No 411
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.91 E-value=3.4e-25 Score=237.48 Aligned_cols=263 Identities=18% Similarity=0.191 Sum_probs=192.8
Q ss_pred cccccccHHHHHHHhcCCCCCceecccCceEEEEEE-ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC------
Q 042958 800 TFEGKIVYEEIIRATNDFDDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR------ 872 (1075)
Q Consensus 800 ~~~~~~~~~e~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------ 872 (1075)
..++.+.+.=-+....+|.+....|+|-|++|.+|. ..-|..||||++... +...+.-+.|+++|+++.
T Consensus 417 DaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN----E~M~KtGl~EleiLkKL~~AD~Ed 492 (752)
T KOG0670|consen 417 DAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN----EVMHKTGLKELEILKKLNDADPED 492 (752)
T ss_pred cccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc----hHHhhhhhHHHHHHHHhhccCchh
Confidence 455666665555667899999999999999999994 445889999999753 334567789999999994
Q ss_pred cCceeeEEEEeeccccchhhe----------ecCccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeee
Q 042958 873 HRNIVKFYGFCSHVRHSLAMI----------LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLL 942 (1075)
Q Consensus 873 h~niv~l~~~~~~~~~~l~~~----------~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 942 (1075)
--|+++++..|.+..+...++ +..++....+.......++.|+.-||.+|-.. +|+|.||||.|||+
T Consensus 493 k~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLV 569 (752)
T KOG0670|consen 493 KFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILV 569 (752)
T ss_pred hhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEe
Confidence 247888887776665543332 33345556677888889999999999999998 99999999999999
Q ss_pred CCCC-CceEeccccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccch--
Q 042958 943 DFDN-EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSS-- 1019 (1075)
Q Consensus 943 ~~~~-~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~-- 1019 (1075)
++.. .+||||||.|.+...+. .+.+..+..|.|||.+.|-.|+...|+||+||++||+.||+.-|.+...-....
T Consensus 570 NE~k~iLKLCDfGSA~~~~ene--itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~ 647 (752)
T KOG0670|consen 570 NESKNILKLCDFGSASFASENE--ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLF 647 (752)
T ss_pred ccCcceeeeccCcccccccccc--ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHH
Confidence 9765 68999999998876442 333456778999999999999999999999999999999998775322110000
Q ss_pred ---------------------hh--------------hhh--hhhhccCC---------CCCCCCcCcHHHHHHHHHHHH
Q 042958 1020 ---------------------LN--------------LNI--ALDEMLDP---------RLPTPSCIVQDKLISIVEVAI 1053 (1075)
Q Consensus 1020 ---------------------~~--------------~~~--~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~ 1053 (1075)
.+ ... .....+.| ..+...........++.+++.
T Consensus 648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd 727 (752)
T KOG0670|consen 648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD 727 (752)
T ss_pred HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence 00 000 00000001 000011223445678999999
Q ss_pred HccCCCCCCCCCHHHHHh
Q 042958 1054 SCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1054 ~cl~~dP~~RPs~~evl~ 1071 (1075)
+|+..||++|.|..|.++
T Consensus 728 kml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 728 KMLILDPEKRITVNQALK 745 (752)
T ss_pred HHhccChhhcCCHHHHhc
Confidence 999999999999999875
No 412
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.90 E-value=8.7e-25 Score=216.65 Aligned_cols=246 Identities=21% Similarity=0.323 Sum_probs=175.3
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccch
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l 890 (1075)
..+.|++.+.+|+|.||.+-.++++ +.+.+|+|.+..+. ...++|.+|...--.+ .|.||+.-|++.......+
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 3467889999999999999999776 57789999987653 2367888888776666 6899999887554433333
Q ss_pred hheecCc--------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeee-CCC-CCceEeccccccccC
Q 042958 891 AMILSNN--------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLL-DFD-NEAHVSDFGIAKFLK 960 (1075)
Q Consensus 891 ~~~~~~~--------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill-~~~-~~~kl~DfGla~~~~ 960 (1075)
....+.. -....+.+....+++.|+++|+.|||++ .+||||||.+|||+ +.| .++|+||||..+..+
T Consensus 98 vF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred EEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence 3222221 1234467788899999999999999999 99999999999998 334 389999999988644
Q ss_pred CCCCceeccccccCccCccccccC-----CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCC
Q 042958 961 PDSSNWTELAGTYGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLP 1035 (1075)
Q Consensus 961 ~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1075)
.. -...--+-.|.|||..... ...+.+|||.||+++|.++||+.||+- .......+...........++.|
T Consensus 175 ~t---V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk-a~~~d~~Y~~~~~w~~rk~~~~P 250 (378)
T KOG1345|consen 175 TT---VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK-ASIMDKPYWEWEQWLKRKNPALP 250 (378)
T ss_pred ce---ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh-hhccCchHHHHHHHhcccCccCc
Confidence 21 1222335578999976432 356789999999999999999999983 22233333223333333344444
Q ss_pred CCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1036 TPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1036 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.. .......+.++.++-+.++|++|-...++.++
T Consensus 251 ~~---F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 251 KK---FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred hh---hcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 32 33344568888999999999999666665554
No 413
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.90 E-value=6.5e-23 Score=215.53 Aligned_cols=202 Identities=31% Similarity=0.563 Sum_probs=166.1
Q ss_pred ecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCcc---
Q 042958 823 IGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNA--- 898 (1075)
Q Consensus 823 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~--- 898 (1075)
||+|.+|.||++... +++.+++|++....... ..+.+.+|++.++.++|++++++++++......... ++...
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~-~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLV-MEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEE-EecCCCCc
Confidence 689999999999765 48999999987543221 347899999999999999999999988764322211 11111
Q ss_pred -----cc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC-CCCceEeccccccccCCCCCceeccc
Q 042958 899 -----AA--KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF-DNEAHVSDFGIAKFLKPDSSNWTELA 970 (1075)
Q Consensus 899 -----~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~DfGla~~~~~~~~~~~~~~ 970 (1075)
.. ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++++|||.+..............
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV 154 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhccc
Confidence 01 3578899999999999999999999 9999999999999999 89999999999987654432234456
Q ss_pred cccCccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHH
Q 042958 971 GTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIV 1049 (1075)
Q Consensus 971 gt~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1049 (1075)
+...|++||..... .++.++|+|++|++++++ ..+.
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~~ 191 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PELK 191 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHHH
Confidence 78899999998877 788999999999999999 2488
Q ss_pred HHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1050 EVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1050 ~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
+++.+|++.+|++||++.++++.+
T Consensus 192 ~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 192 DLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHhhCCcccCcCHHHHhhCC
Confidence 999999999999999999998753
No 414
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.89 E-value=2.3e-24 Score=238.22 Aligned_cols=244 Identities=26% Similarity=0.374 Sum_probs=186.9
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccc-hh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHS-LA 891 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-l~ 891 (1075)
.++|.....+|.|.||.|||| +..+++.+|||+++.....+ .+-..+|+-+++.-+|||||.++|.+...+.. ..
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 467888999999999999999 55689999999998754332 45667899999999999999999977554433 33
Q ss_pred heecCccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC
Q 042958 892 MILSNNAA-------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS 964 (1075)
Q Consensus 892 ~~~~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 964 (1075)
|.+...+. ..++++.++..+.+...+|++|||+. +-+|||||-.||+++..|.+|++|||.+..+...-.
T Consensus 91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~ 167 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA 167 (829)
T ss_pred EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhh
Confidence 33333322 34578888899999999999999999 889999999999999999999999999988776666
Q ss_pred ceeccccccCccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC-CcC
Q 042958 965 NWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP-SCI 1040 (1075)
Q Consensus 965 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1040 (1075)
......||++|||||+.. .+.|...+|||+.|+...|+-.-+.|--..... ..+.-+....+..+ ...
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--------r~l~LmTkS~~qpp~lkD 239 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--------RALFLMTKSGFQPPTLKD 239 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--------HHHHHhhccCCCCCcccC
Confidence 677889999999999763 556889999999999999998888773322211 11111111111111 112
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
...-...+-++++.|+.++|++||+++.++.
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 2233456889999999999999999987654
No 415
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=4.1e-23 Score=246.20 Aligned_cols=266 Identities=29% Similarity=0.404 Sum_probs=153.5
Q ss_pred CcceeeccccccCCCCccccCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccccccccccccccccceeccc
Q 042958 362 NLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLG 441 (1075)
Q Consensus 362 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 441 (1075)
.-..|++++|.++ .+|..+. .+|+.|++++|+++ .+|. ..++|++|+|++|+|+.+ |.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCcc-cCc---ccccceeecc
Confidence 3456777777774 4565554 36777777777776 3443 246677777777777643 332 3566677777
Q ss_pred ccccccCCCCCCccccccccccccCCccccCCCccccCcCCCCEEeCCCCcccCCCcccccCCCccceeeccCCCCCCCC
Q 042958 442 YNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNSLFDSI 521 (1075)
Q Consensus 442 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 521 (1075)
+|.|+ .+|..+ ++|+.|++++|+++ .+|.. .++|+.|+|++|+|++ +|... .+|+.|++++|++++ +
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-L 337 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-c
Confidence 77766 344332 34566666777666 34432 3456666666666663 33221 245555666665542 2
Q ss_pred CccccCccccccccccccccccccCCcccccccCCCccccccchhhhhhhHhHHHhhcccccccccccccCcccccceee
Q 042958 522 PSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLD 601 (1075)
Q Consensus 522 ~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 601 (1075)
|. +|.+|+.|+|++|+|++ +|.. ..+|..|++++|+|++ +|.. ..+|+.|+
T Consensus 338 P~---------------------lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~Ld 388 (788)
T PRK15387 338 PT---------------------LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELI 388 (788)
T ss_pred cc---------------------cccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEE
Confidence 32 23445556666666653 3322 1234555666666663 3332 24577777
Q ss_pred cCCCcccCcccccccccccceEEEccccccccccchhcccccccceeeeccccccCchhhhhccccccceeecCCCcccc
Q 042958 602 LSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIPSQICIMQSLENLNLSHNSLVG 681 (1075)
Q Consensus 602 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls~N~l~~ 681 (1075)
|++|+|+ .+|..+ ++|+.|++++|+|++ +|... .+|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++
T Consensus 389 Ls~N~Lt-~LP~l~---s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~ 459 (788)
T PRK15387 389 VSGNRLT-SLPVLP---SELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSE 459 (788)
T ss_pred ecCCccc-CCCCcc---cCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCc
Confidence 7777776 355432 456777777777764 44322 34566777777776 366666667777777777777776
Q ss_pred CChhhhcc
Q 042958 682 LIPSCFEK 689 (1075)
Q Consensus 682 ~~p~~~~~ 689 (1075)
.+|..+..
T Consensus 460 ~~~~~L~~ 467 (788)
T PRK15387 460 RTLQALRE 467 (788)
T ss_pred hHHHHHHH
Confidence 66665543
No 416
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=2.8e-22 Score=239.09 Aligned_cols=224 Identities=28% Similarity=0.361 Sum_probs=104.2
Q ss_pred CCCCeEeccCCCCCCccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceec
Q 042958 241 RSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYI 320 (1075)
Q Consensus 241 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 320 (1075)
++|++|+|++|+++ .+|.. .++|+.|++++|.++. +|..+ .+|+.|++++|+++.+ |.. +++|+.|++
T Consensus 242 ~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~~-Lp~lp---~~L~~L~Ls~N~Lt~L-P~~---p~~L~~LdL 309 (788)
T PRK15387 242 PELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLTH-LPALP---SGLCKLWIFGNQLTSL-PVL---PPGLQELSV 309 (788)
T ss_pred CCCcEEEecCCccC-cccCc---ccccceeeccCCchhh-hhhch---hhcCEEECcCCccccc-ccc---ccccceeEC
Confidence 34444444444444 22321 1244444444444442 22211 3344455555555432 221 234555555
Q ss_pred ccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCccccCCCcccceeeecccccccc
Q 042958 321 HNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGS 400 (1075)
Q Consensus 321 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 400 (1075)
++|++++ +|... .+|+.|++++|++++ +|.. ..+|++|+|++|+|.+ +|.. ..+|+.|++++|+|+.
T Consensus 310 S~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~- 376 (788)
T PRK15387 310 SDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS- 376 (788)
T ss_pred CCCcccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-
Confidence 5555553 22211 234455555555542 3321 1345555555555532 3321 1344555555555552
Q ss_pred CChhhccCCCCCeEEeeccccccccccccccccccceecccccccccCCCCCCccccccccccccCCccccCCCccccCc
Q 042958 401 IPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNL 480 (1075)
Q Consensus 401 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 480 (1075)
+|.. ..+|+.|++++|+|++ +|.. .++|+.|++++|+|+ .+|..+ .+|+.|++++|+|+ .+|..+..+
T Consensus 377 LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L 444 (788)
T PRK15387 377 LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHL 444 (788)
T ss_pred Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhc
Confidence 3332 2345666666666653 3322 234556666666665 244322 24555666666665 455555556
Q ss_pred CCCCEEeCCCCcccCCCcccc
Q 042958 481 RSISNLALNNNKLSGSIPQSL 501 (1075)
Q Consensus 481 ~~L~~L~L~~N~l~~~~~~~~ 501 (1075)
++|+.|+|++|+|++..++.+
T Consensus 445 ~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 445 SSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred cCCCeEECCCCCCCchHHHHH
Confidence 666666666666655544444
No 417
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.87 E-value=2.7e-22 Score=204.53 Aligned_cols=155 Identities=23% Similarity=0.279 Sum_probs=117.7
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccccccCccCcc
Q 042958 900 AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPE 979 (1075)
Q Consensus 900 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE 979 (1075)
+..+++.+++.|+.||++||+|||+. + ||+||+++.++.+|+ ||.++...... ..||+.|||||
T Consensus 11 ~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-----~~g~~~y~aPE 74 (176)
T smart00750 11 GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ-----SRVDPYFMAPE 74 (176)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc-----CCCcccccChH
Confidence 34689999999999999999999999 5 999999999999999 99998765422 26889999999
Q ss_pred ccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHH--HHHHHHHHccC
Q 042958 980 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLI--SIVEVAISCLD 1057 (1075)
Q Consensus 980 ~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~li~~cl~ 1057 (1075)
++.+..++.++|||||||++|||++|+.||......... ......... ...+........... .+.+++.+||+
T Consensus 75 ~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~cl~ 150 (176)
T smart00750 75 VIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAI---LEILLNGMP-ADDPRDRSNLESVSAARSFADFMRVCAS 150 (176)
T ss_pred HhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHH---HHHHHHHhc-cCCccccccHHHHHhhhhHHHHHHHHHh
Confidence 999999999999999999999999999998643321110 111111111 111111111222222 59999999999
Q ss_pred CCCCCCCCHHHHHhhhc
Q 042958 1058 ENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1058 ~dP~~RPs~~evl~~L~ 1074 (1075)
.||++||++.|+++.+.
T Consensus 151 ~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 151 RLPQRREAANHYLAHCR 167 (176)
T ss_pred cccccccCHHHHHHHHH
Confidence 99999999999998653
No 418
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.87 E-value=1.1e-21 Score=208.58 Aligned_cols=189 Identities=31% Similarity=0.505 Sum_probs=153.2
Q ss_pred CCCCceecccCceEEEEEEECC-CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 817 FDDEHCIGKGGQGSVYKAELAS-GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
|+..+.||+|++|.||+|...+ ++.+|+|.+...... ...+.+.+|++.+++++|+|++++++++.........+..
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 5667899999999999997764 899999998764322 2467899999999999999999999988764433222211
Q ss_pred Ccc--------ccCC-CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC-Cc
Q 042958 896 NNA--------AAKD-LGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS-SN 965 (1075)
Q Consensus 896 ~~~--------~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~-~~ 965 (1075)
... .... +++.....++.++++++.|||+. +++|+|++|+||+++.++.++++|||.+....... ..
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 111 1122 78889999999999999999999 99999999999999999999999999998776542 12
Q ss_pred eeccccccCccCcccc-ccCCCCcccchHhHHHHHHHHHhCCCCCC
Q 042958 966 WTELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPRD 1010 (1075)
Q Consensus 966 ~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~elltg~~p~~ 1010 (1075)
.....++..|++||.. ....++.++|||++|+++|||++|+.||+
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 2345678899999998 66678889999999999999999999996
No 419
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.87 E-value=1.3e-22 Score=215.10 Aligned_cols=194 Identities=27% Similarity=0.379 Sum_probs=150.9
Q ss_pred HHHHHHhcCCCCCceecccCceEEEEEEEC----CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEE
Q 042958 808 EEIIRATNDFDDEHCIGKGGQGSVYKAELA----SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGF 882 (1075)
Q Consensus 808 ~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 882 (1075)
+.+....+.|...++||+|.|++||+|... ..+.||+|.+..... ...+..|++++..+ .+.||+++.++
T Consensus 29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-----p~ri~~El~~L~~~gG~~ni~~~~~~ 103 (418)
T KOG1167|consen 29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-----PSRILNELEMLYRLGGSDNIIKLNGC 103 (418)
T ss_pred hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-----chHHHHHHHHHHHhccchhhhcchhh
Confidence 344555678999999999999999999433 467899999865432 35788999999999 68999999987
Q ss_pred eeccccchhheecCccc------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC-CCceEecccc
Q 042958 883 CSHVRHSLAMILSNNAA------AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGI 955 (1075)
Q Consensus 883 ~~~~~~~l~~~~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGl 955 (1075)
+...+....+ +.+... -..++..+...+...+..||.|+|.. |||||||||+|++++.. +.-.|+|||+
T Consensus 104 ~rnnd~v~iv-lp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 104 FRNNDQVAIV-LPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred hccCCeeEEE-ecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechh
Confidence 7665544333 222221 23467888899999999999999999 99999999999999854 5789999999
Q ss_pred ccccCCCC---------------------------------C-----------ceeccccccCccCccccccC-CCCccc
Q 042958 956 AKFLKPDS---------------------------------S-----------NWTELAGTYGYVAPELAYTM-KVTEKC 990 (1075)
Q Consensus 956 a~~~~~~~---------------------------------~-----------~~~~~~gt~~y~aPE~~~~~-~~~~~~ 990 (1075)
|....... . .....+||++|+|||++... ..++++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97221100 0 00124699999999987654 568899
Q ss_pred chHhHHHHHHHHHhCCCCCC
Q 042958 991 DVYSFGVLALEVIKGKHPRD 1010 (1075)
Q Consensus 991 Dv~s~G~vl~elltg~~p~~ 1010 (1075)
||||.||++.-+++++.||-
T Consensus 260 Diws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred ceeeccceeehhhccccccc
Confidence 99999999999999999985
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.86 E-value=2.5e-22 Score=252.16 Aligned_cols=156 Identities=18% Similarity=0.228 Sum_probs=113.3
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC-------------------CCCceEeccccccccC
Q 042958 900 AKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF-------------------DNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 900 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-------------------~~~~kl~DfGla~~~~ 960 (1075)
...+++.+++.++.||++||+|||++ +|+||||||+|||++. ++.+|++|||+++...
T Consensus 74 ~~~~~~~~~~~i~~qi~~al~~lH~~---gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~ 150 (793)
T PLN00181 74 DRSVDAFECFHVFRQIVEIVNAAHSQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREE 150 (793)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhC---CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccc
Confidence 34589999999999999999999999 9999999999999954 4456777777775422
Q ss_pred CCC----------------CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhh
Q 042958 961 PDS----------------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNI 1024 (1075)
Q Consensus 961 ~~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~ 1024 (1075)
... .......||+.|||||++.+..++.++|||||||++|||++|..|+..... ....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~------~~~~ 224 (793)
T PLN00181 151 ILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR------TMSS 224 (793)
T ss_pred cccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH------HHHH
Confidence 100 001123578899999999999999999999999999999999888642110 0000
Q ss_pred hhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1025 ALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.......+.. .........++.+||++||.+||+|.||++
T Consensus 225 ~~~~~~~~~~-------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 225 LRHRVLPPQI-------LLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHhhcChhh-------hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 0011111110 112234668889999999999999999986
No 421
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=1.2e-20 Score=227.33 Aligned_cols=280 Identities=25% Similarity=0.394 Sum_probs=186.4
Q ss_pred CCceeecccCcccccCCCCCCCCCCCcEEEccCcccCCCCCccccccCCcceeecccccccCCCCCCCCCCCCCCEEEcC
Q 042958 98 RLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRLSSLNYLALYSNYLEDLIPPSLGNLSNLDTLHLY 177 (1075)
Q Consensus 98 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 177 (1075)
+.+.|+++++.++ .+|..+. +.|+.|+|++|+++ .+|..+. ++|++|++++|.++.+ |..+. ++|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~LtsL-P~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTSI-PATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccccC-Chhhh--ccccEEECc
Confidence 4567777777776 4565553 46777777777777 4555443 4677777777777754 33332 367888888
Q ss_pred CCCCCCCCCccccCccccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCcc
Q 042958 178 DNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSI 257 (1075)
Q Consensus 178 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 257 (1075)
+|++. .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|++++ +|..+. ++|+.|++++|+++. +
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-L 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-C
Confidence 88877 3454443 46888888888887 4566554 478888888888874 454433 468888888888884 4
Q ss_pred CCCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCCCccccccc
Q 042958 258 PHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLR 337 (1075)
Q Consensus 258 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 337 (1075)
|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+. +|..+. ++|++|+|++|.++. +|..+. .
T Consensus 320 P~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~--~ 388 (754)
T PRK15370 320 PETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETLP--PTITTLDVSRNALTN-LPENLP--A 388 (754)
T ss_pred Ccccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhhc--CCcCEEECCCCcCCC-CCHhHH--H
Confidence 54443 578888888888885 565553 688899999998874 555443 688899999999884 555554 3
Q ss_pred ccccccccCCcccccCCCcC----CCCCCcceeeccccccCCCCccccCCCcccceeeeccccccc-cCChhhccCCCCC
Q 042958 338 SLSNLGLSGNKLSGSIPPSL----GYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSG-SIPHSLGNLTNLA 412 (1075)
Q Consensus 338 ~L~~L~l~~N~l~~~~~~~l----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~ 412 (1075)
+|+.|++++|+++ .+|..+ ..++++..|++.+|.+.. ..+.+|+.| ++.+.+.| .++...+.+.+++
T Consensus 389 sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~ 460 (754)
T PRK15370 389 ALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIVR 460 (754)
T ss_pred HHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCCccccccccccccc
Confidence 6888999999988 455443 445788999999998852 344555555 34444433 3333444444444
Q ss_pred eEE
Q 042958 413 TLD 415 (1075)
Q Consensus 413 ~L~ 415 (1075)
...
T Consensus 461 ~~~ 463 (754)
T PRK15370 461 VTR 463 (754)
T ss_pred ccc
Confidence 433
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=1.2e-20 Score=227.32 Aligned_cols=246 Identities=26% Similarity=0.449 Sum_probs=138.3
Q ss_pred ccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCCCCcccccccccccc
Q 042958 194 SLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLY 273 (1075)
Q Consensus 194 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 273 (1075)
+...|+++++.++ .+|..+. ++|+.|+|++|+++. +|..+. ++|+.|++++|+++ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 4677888888887 5665553 468888888888874 455443 47888888888887 4555443 357777777
Q ss_pred cccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCCCcccccccccccccccCCcccccC
Q 042958 274 ENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSI 353 (1075)
Q Consensus 274 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 353 (1075)
+|.++ .+|..+. .+|+.|++++|+++. +|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|+++. +
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-L 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-C
Confidence 77777 4555443 467777777777763 444442 366666777666663 333332 345566666666552 3
Q ss_pred CCcCCCCCCcceeeccccccCCCCccccCCCcccceeeeccccccccCChhhccCCCCCeEEeecccccccccccccccc
Q 042958 354 PPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLR 433 (1075)
Q Consensus 354 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 433 (1075)
|..+. ++|+.|++++|.+ ++ +|..+. ++|+.|++++|+|+ .+|..+. +
T Consensus 320 P~~l~--~sL~~L~Ls~N~L------------------------t~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~ 367 (754)
T PRK15370 320 PETLP--PGLKTLEAGENAL------------------------TS-LPASLP--PELQVLDVSKNQIT-VLPETLP--P 367 (754)
T ss_pred Ccccc--ccceeccccCCcc------------------------cc-CChhhc--CcccEEECCCCCCC-cCChhhc--C
Confidence 33221 3445555555544 32 232221 34555555555554 2333221 3
Q ss_pred ccceecccccccccCCCCCCccccccccccccCCccccCCCccc----cCcCCCCEEeCCCCccc
Q 042958 434 SLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEI----GNLRSISNLALNNNKLS 494 (1075)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l~~L~~L~L~~N~l~ 494 (1075)
+|+.|+|++|+|+ .+|..+. ..|+.|++++|+|+ .+|..+ +.++.+..|++.+|+|+
T Consensus 368 ~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 368 TITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 4555555555555 2333332 24556666666665 334332 23355666666666665
No 423
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.81 E-value=3.8e-19 Score=181.92 Aligned_cols=246 Identities=17% Similarity=0.250 Sum_probs=181.1
Q ss_pred hcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccchh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHSLA 891 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~l~ 891 (1075)
.-.|.++++||+|+||+++.| .+-++++||||.-.... + ..++..|.+..+.+ ..++|..++-|-....+...
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~---APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--E---APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccC--C---cchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence 457999999999999999999 56689999999854332 1 35778899998888 56888888754444333222
Q ss_pred he-ecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-----CceEeccccccc
Q 042958 892 MI-LSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-----EAHVSDFGIAKF 958 (1075)
Q Consensus 892 ~~-~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-----~~kl~DfGla~~ 958 (1075)
++ +-.. -.+..++..+...+|.|++.-++|+|++ ..|.|||||+|+||...+ .+.++|||+|+.
T Consensus 102 VidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 102 VIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 21 1111 1356688888899999999999999999 999999999999998655 489999999998
Q ss_pred cCCCCCc-------eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccC
Q 042958 959 LKPDSSN-------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD 1031 (1075)
Q Consensus 959 ~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1075)
+.++.+. .....||.+||+-....+.+-+.+.|+-|+|-|+++.+.|..||.+..... .....+++-+
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t-----nK~kYeKIGe 253 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT-----NKEKYEKIGE 253 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc-----hHHHHHHhcc
Confidence 8765432 345679999999999999999999999999999999999999998765432 1222333333
Q ss_pred CCCCCC-CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1032 PRLPTP-SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1032 ~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
.+-..+ .......+.++..-+.-.-..+=++-|..+-+.+.
T Consensus 254 ~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~L 295 (449)
T KOG1165|consen 254 TKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKL 295 (449)
T ss_pred ccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence 332222 11222344566777776667777787877655443
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.3e-19 Score=200.93 Aligned_cols=165 Identities=20% Similarity=0.225 Sum_probs=120.5
Q ss_pred HHHhcCCCCCceecccCceEEEEEEEC--CCCEEEEEEccCCCC--CchhHHHHHHHHHHHHhcCCcCceee-EEEEeec
Q 042958 811 IRATNDFDDEHCIGKGGQGSVYKAELA--SGEIVAVKKFHSPLP--GEMTFQQEFLNEVKALTEIRHRNIVK-FYGFCSH 885 (1075)
Q Consensus 811 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~ 885 (1075)
....++|+..+.||+|+||+||+|..+ +++.||||+...... ......+.|.+|++++++++|+|+++ ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345678999999999999999999654 578889998753211 12234567999999999999999985 4432
Q ss_pred cccchhheecCccccCCCCH---HHHHHHHHHHHHHHHHHHhCCCCCeEEecC-CCCCeeeCCCCCceEeccccccccCC
Q 042958 886 VRHSLAMILSNNAAAKDLGW---TRRMNVIKGISDALSYMHNDCFPPIVHRDI-SSKNVLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 886 ~~~~l~~~~~~~~~~~~l~~---~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-k~~Nill~~~~~~kl~DfGla~~~~~ 961 (1075)
....+.+ +... +..+.. .....++.|+++||+|||+. +|+|||| ||+||+++.++.+||+|||+|+.+..
T Consensus 91 ~~~~LVm--E~~~-G~~L~~~~~~~~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 91 GKDGLVR--GWTE-GVPLHLARPHGDPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred CCcEEEE--EccC-CCCHHHhCccchHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 1222222 2211 122211 11257889999999999999 9999999 99999999999999999999997765
Q ss_pred CCCc--------eeccccccCccCccccccC
Q 042958 962 DSSN--------WTELAGTYGYVAPELAYTM 984 (1075)
Q Consensus 962 ~~~~--------~~~~~gt~~y~aPE~~~~~ 984 (1075)
.... .....+++.|+|||++...
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 4321 1345678899999998643
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.79 E-value=1.1e-18 Score=195.20 Aligned_cols=245 Identities=20% Similarity=0.227 Sum_probs=173.1
Q ss_pred CCCCCceecccCceEEEEEEECC--CCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCc----CceeeEEEEee-cccc
Q 042958 816 DFDDEHCIGKGGQGSVYKAELAS--GEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH----RNIVKFYGFCS-HVRH 888 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~-~~~~ 888 (1075)
+|.+.+.||+|+||.||.+.... ...+|+|......... ...+..|+.++..+.. +++..+++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 79999999999999999996543 3578999876532221 1257778888888863 58888888773 3322
Q ss_pred chh-heecC--------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC-----CCceEeccc
Q 042958 889 SLA-MILSN--------NAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD-----NEAHVSDFG 954 (1075)
Q Consensus 889 ~l~-~~~~~--------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-----~~~kl~DfG 954 (1075)
.+. |.+.. ......++..+..+|+.|++.||+++|+. |++||||||.|+.+... ..+.+.|||
T Consensus 96 ~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 96 NFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred eEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 222 21111 11146789999999999999999999999 99999999999999865 368999999
Q ss_pred ccc--ccCCCCCc--------eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhh
Q 042958 955 IAK--FLKPDSSN--------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNI 1024 (1075)
Q Consensus 955 la~--~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~ 1024 (1075)
+|+ .+...... .....||.+|.+++...+...+.+.|+||++.++.|+..|..||...............
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~ 252 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKD 252 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHH
Confidence 998 43222211 12345999999999999999999999999999999999999999654432211111111
Q ss_pred hhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhh
Q 042958 1025 ALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1073 (1075)
........ .....+..+.++...+-..+..++|....+.+.+
T Consensus 253 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l 294 (322)
T KOG1164|consen 253 PRKLLTDR-------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELL 294 (322)
T ss_pred hhhhcccc-------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHH
Confidence 11111111 0111223466777777778999999999887765
No 426
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.79 E-value=4.1e-20 Score=183.24 Aligned_cols=238 Identities=18% Similarity=0.277 Sum_probs=168.3
Q ss_pred CCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh--eec-
Q 042958 819 DEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM--ILS- 895 (1075)
Q Consensus 819 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~--~~~- 895 (1075)
...+|.+...|+.|+|+++ |..+++|++...... ....++|..|.-.++-+.||||++++|.|..+.....+ ++.
T Consensus 194 l~tkl~e~hsgelwrgrwq-gndivakil~vr~~t-~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQ-GNDIVAKILNVREVT-ARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhccCCCccccccccc-Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 3456889999999999998 555666777543322 22346789999999999999999999999876543221 111
Q ss_pred -------CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceec
Q 042958 896 -------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTE 968 (1075)
Q Consensus 896 -------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~ 968 (1075)
....+...+..+..++|.++|+|++|||+.. |-|-.--+.++.|++|++.+++|+ .+-+++.... ..
T Consensus 272 gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris-mad~kfsfqe----~g 345 (448)
T KOG0195|consen 272 GSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQE----VG 345 (448)
T ss_pred hHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee-cccceeeeec----cc
Confidence 1122344677889999999999999999973 233344688999999999998875 1222221111 11
Q ss_pred cccccCccCccccccCCCC---cccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 969 LAGTYGYVAPELAYTMKVT---EKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 969 ~~gt~~y~aPE~~~~~~~~---~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
..-.+.||+||.++..+.+ .++|+|||++++||+-|...||...++.+..-...-+.+ +... ++..+
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialegl------rv~i----ppgis 415 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGL------RVHI----PPGIS 415 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccc------cccC----CCCcc
Confidence 2346789999999876544 578999999999999999999987666543221111111 1111 22344
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
..+.+++.-|+..||.+||.++.|+-.||
T Consensus 416 ~hm~klm~icmnedpgkrpkfdmivpile 444 (448)
T KOG0195|consen 416 RHMNKLMNICMNEDPGKRPKFDMIVPILE 444 (448)
T ss_pred HHHHHHHHHHhcCCCCcCCCcceehhhHH
Confidence 56899999999999999999999988775
No 427
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.77 E-value=3.7e-19 Score=174.06 Aligned_cols=249 Identities=19% Similarity=0.294 Sum_probs=179.8
Q ss_pred HhcCCCCCceecccCceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCc-CceeeEEEEeeccccch
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH-RNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~l 890 (1075)
...+|...++||.|+||.+|.| ...+|+.||||+-..... ..++..|.++...+++ ..|..+..|..+.....
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 3578999999999999999999 667899999998654322 2567789999998865 55666665555443322
Q ss_pred -hheecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC---CCceEecccccccc
Q 042958 891 -AMILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD---NEAHVSDFGIAKFL 959 (1075)
Q Consensus 891 -~~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~DfGla~~~ 959 (1075)
+|-+-... ....++..+.+-.|-|+..-++|+|.+ +++||||||+|+|+.-+ ..+.++|||+|+.+
T Consensus 88 lVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 88 LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred eeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhh
Confidence 22221111 234567778888999999999999999 89999999999999744 46899999999987
Q ss_pred CCCCCc-------eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCC
Q 042958 960 KPDSSN-------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDP 1032 (1075)
Q Consensus 960 ~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1032 (1075)
.+..+. .+...||.+|.+-....+...+.+.|+-|+|.++...-.|..||++...... ....+.+...
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-----~QKyEkI~Ek 239 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-----KQKYEKISEK 239 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-----HHHHHHHHHh
Confidence 654322 2346799999998888888889999999999999999999999987654221 1122233333
Q ss_pred CCCCCC-cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1033 RLPTPS-CIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1033 ~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
+...+. ......+.++.-.+.-|-..-=++-|...-+.+.+.
T Consensus 240 K~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 240 KMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred hcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 332221 111223456777888888888888888877766654
No 428
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.77 E-value=4.2e-19 Score=207.21 Aligned_cols=238 Identities=20% Similarity=0.221 Sum_probs=164.6
Q ss_pred CCCCCceecccCceEEEEEEECCCCEEEEEEccCCCC-CchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh--
Q 042958 816 DFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLP-GEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM-- 892 (1075)
Q Consensus 816 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~-- 892 (1075)
+|...+.+|.+.|=+|.+|+.+.|. |+||++.+... .......+-..|++ ...++|||++++.-+-...+..+.+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5777889999999999999888787 88999876532 12222233334444 5566999999987654333322111
Q ss_pred e----ecCc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccC-CCC--C
Q 042958 893 I----LSNN-AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLK-PDS--S 964 (1075)
Q Consensus 893 ~----~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~-~~~--~ 964 (1075)
+ +++. .....+...+.+.||.|++.|+...|+. +|+|||||.+|||++.-..+.|+||..-+... +++ .
T Consensus 102 yvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 102 YVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred HHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 1 1121 2223345667788999999999999999 99999999999999999999999998765321 111 1
Q ss_pred ce----eccccccCccCccccccC----------C-CCcccchHhHHHHHHHHHh-CCCCCCccCccccc---hhhhhhh
Q 042958 965 NW----TELAGTYGYVAPELAYTM----------K-VTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSS---SLNLNIA 1025 (1075)
Q Consensus 965 ~~----~~~~gt~~y~aPE~~~~~----------~-~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~---~~~~~~~ 1025 (1075)
.+ .+...-..|.|||.+... . .+++-||||+||++.|+++ |++||...+-.... ..+.+..
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~ 258 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQL 258 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHH
Confidence 22 222334579999987542 1 4678899999999999998 89998732211111 1122222
Q ss_pred hhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1026 LDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
++++-|. .+++++..|++.||.+|-++++.++.
T Consensus 259 Le~Ied~--------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 259 LEKIEDV--------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHhCcCc--------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 3333222 38899999999999999999999875
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=3.7e-19 Score=210.63 Aligned_cols=247 Identities=19% Similarity=0.258 Sum_probs=172.7
Q ss_pred CCCceecccCceEEEEEE-ECCCCEEEEEEccC---CCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh-
Q 042958 818 DDEHCIGKGGQGSVYKAE-LASGEIVAVKKFHS---PLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM- 892 (1075)
Q Consensus 818 ~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~---~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~- 892 (1075)
...+++|.|++|.|+.+. ....+.++.|.+.. ....+......+..|..+-..++|||++..+..+.+.......
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 345789999999888773 33445455554432 2222333333477888889999999987765544332222111
Q ss_pred eec------CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC--
Q 042958 893 ILS------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS-- 964 (1075)
Q Consensus 893 ~~~------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-- 964 (1075)
.+. .......+...++-.++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+.....+..
T Consensus 401 E~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 401 EYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred hcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 111 111223577788888999999999999999 999999999999999999999999999986654433
Q ss_pred --ceeccccccCccCccccccCCCCc-ccchHhHHHHHHHHHhCCCCCCccCccccc-hhhhhhhhhhccCCCCCCCCcC
Q 042958 965 --NWTELAGTYGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDFISSMSSS-SLNLNIALDEMLDPRLPTPSCI 1040 (1075)
Q Consensus 965 --~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~s~G~vl~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 1040 (1075)
.....+|+-.|+|||.+.+..|++ ..||||.|++++.|.+|+.||......+.. .......... ....+...
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~----~~~~~~~~ 553 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRN----IFEGPNRL 553 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccc----cccChHHH
Confidence 234577999999999999999975 579999999999999999999744332211 0000000000 11112223
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1041 VQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1041 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
....+.....++.++++.||++|.|+++|++
T Consensus 554 ~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 554 LSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred HHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 3445567889999999999999999999986
No 430
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.75 E-value=2.9e-18 Score=181.44 Aligned_cols=225 Identities=21% Similarity=0.246 Sum_probs=143.0
Q ss_pred CCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCc----------CceeeEEEEee-
Q 042958 817 FDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH----------RNIVKFYGFCS- 884 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~- 884 (1075)
+...+.||.|+++.||.++.. +|+.+|||++...........+++.+|.-....+.+ -.++.-++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 445678999999999999664 699999999877665555567788888876666432 12222222111
Q ss_pred --------cccc--chh----heecCc----------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEec
Q 042958 885 --------HVRH--SLA----MILSNN----------------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRD 934 (1075)
Q Consensus 885 --------~~~~--~l~----~~~~~~----------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 934 (1075)
...+ .+. ..+... .....+....++.+..|+.+.+++||+. |+||+|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgd 170 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGD 170 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecc
Confidence 1100 000 001000 0011234455677889999999999999 999999
Q ss_pred CCCCCeeeCCCCCceEeccccccccCCCCCceeccccccCccCcccccc--------CCCCcccchHhHHHHHHHHHhCC
Q 042958 935 ISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT--------MKVTEKCDVYSFGVLALEVIKGK 1006 (1075)
Q Consensus 935 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~G~vl~elltg~ 1006 (1075)
|+|+|++++++|.++++||+.....+. .......+..|.+||.... ..++.+.|.|++|+++|.|++|+
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~---~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~ 247 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGT---RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR 247 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTE---EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCc---eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence 999999999999999999998876442 2222345678999997644 24788999999999999999999
Q ss_pred CCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCC
Q 042958 1007 HPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESR 1063 (1075)
Q Consensus 1007 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 1063 (1075)
.||+.......... .+ ..+. +.+..+..+|..+++++|.+|
T Consensus 248 lPf~~~~~~~~~~~------------~f---~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEADPEW------------DF---SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGSTSGG------------GG---TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCccccccc------------cc---hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99985432211111 01 1122 566679999999999999988
No 431
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.75 E-value=3.6e-17 Score=185.70 Aligned_cols=249 Identities=27% Similarity=0.392 Sum_probs=180.1
Q ss_pred CCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcC-ceeeEEEEeeccccc-hhhee
Q 042958 817 FDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR-NIVKFYGFCSHVRHS-LAMIL 894 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~-l~~~~ 894 (1075)
|...+.+|.|+||.||++... ..+|+|.+.............+.+|+.+++.+.|+ +++++.+++...... +.+..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999766 88999998776544433467899999999999988 799999988554431 11111
Q ss_pred cCc-------ccc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC-CceEeccccccccCCCC
Q 042958 895 SNN-------AAA---KDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN-EAHVSDFGIAKFLKPDS 963 (1075)
Q Consensus 895 ~~~-------~~~---~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~~~~~~ 963 (1075)
... ... ..+.......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 110 011 2577888899999999999999999 999999999999999998 79999999998655443
Q ss_pred C------ceeccccccCccCcccccc---CCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCC
Q 042958 964 S------NWTELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRL 1034 (1075)
Q Consensus 964 ~------~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 (1075)
. ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||........ .............+..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA-TSQTLKIILELPTPSL 235 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcccc-HHHHHHHHHhcCCccc
Confidence 2 2356789999999999987 5788899999999999999999999764432100 0001111111111101
Q ss_pred CCCC--cCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1035 PTPS--CIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1035 ~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.... .........+.+++..|+..+|..|.++.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 1000 000112246889999999999999999887654
No 432
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=2.8e-20 Score=172.21 Aligned_cols=177 Identities=35% Similarity=0.623 Sum_probs=102.1
Q ss_pred ccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCccccCCCcccceeeeccccccccCChhhccCCCCCeEE
Q 042958 336 LRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLD 415 (1075)
Q Consensus 336 l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 415 (1075)
+..++.|.||+|+++ .+|+.+..+.+|+.|++++|++ +.+|..+..++.|+.|+++-|++. +.|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqi-e~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQI-EELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchh-hhcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 445555666666665 4555555556666666666665 445555566666666666666664 5566666666666666
Q ss_pred eecccccc-ccccccccccccceecccccccccCCCCCCccccccccccccCCccccCCCccccCcCCCCEEeCCCCccc
Q 042958 416 LYDNSLSG-SIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLS 494 (1075)
Q Consensus 416 L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 494 (1075)
|++|++.. ..|+.|..+..|+.|+|++|.+. .+|..++++++|+.|.+.+|.+- .+|.+++.+..|++|++.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 66665543 34556666666666666666665 55666666666666666666665 45666666666666666666665
Q ss_pred CCCcccccCCCc---cceeeccCCCCC
Q 042958 495 GSIPQSLGNLSN---LVILYLYNNSLF 518 (1075)
Q Consensus 495 ~~~~~~~~~l~~---L~~L~L~~N~l~ 518 (1075)
.+|+.++++.- =+.+.+.+|.+.
T Consensus 187 -vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 187 -VLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred -ecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 44444444321 233444445443
No 433
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=9e-20 Score=205.37 Aligned_cols=113 Identities=24% Similarity=0.312 Sum_probs=71.9
Q ss_pred cCcccccceeecCCCcccCc----ccccccccccceEEEccccccccccchhccc-----ccccceeeeccccccC----
Q 042958 591 LGSLAQLEHLDLSSNRLSNS----IPKSFGNLVKLHYLNLSNNQFSRGIPIKLEE-----LIHLSELDLSHNFLRE---- 657 (1075)
Q Consensus 591 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~ls~N~l~~---- 657 (1075)
+..++.|++|+|++|.+++. ++..+..+++|++|++++|.+++.....+.. ...|+.|++++|.++.
T Consensus 189 l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~ 268 (319)
T cd00116 189 LKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAK 268 (319)
T ss_pred HHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHH
Confidence 33446777777777777642 3344556677788888887776533333322 3677888888887762
Q ss_pred chhhhhccccccceeecCCCccccC----Chhhhccc-ccccEEeecCCcc
Q 042958 658 AIPSQICIMQSLENLNLSHNSLVGL----IPSCFEKM-HGLLRIDISYNEL 703 (1075)
Q Consensus 658 ~~~~~~~~~~~L~~L~ls~N~l~~~----~p~~~~~~-~~l~~l~~s~N~~ 703 (1075)
.+...+..+++|+.+++++|.++.. ....+... +.|+++|+.+|.+
T Consensus 269 ~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 269 DLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 3344555667788888888888744 44444444 5677777777753
No 434
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=1.3e-19 Score=203.96 Aligned_cols=260 Identities=28% Similarity=0.314 Sum_probs=137.0
Q ss_pred CCCcccceeeecccccccc----CChhhccCCCCCeEEeecccccc------ccccccccccccceecccccccccCCCC
Q 042958 382 GNLRSLSMLSLGYNKLSGS----IPHSLGNLTNLATLDLYDNSLSG------SIPSEFGNLRSLSTLSLGYNKLSGSIPH 451 (1075)
Q Consensus 382 ~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~------~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 451 (1075)
..+..|++|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..+++|+.|++++|.+.+..+.
T Consensus 20 ~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~ 99 (319)
T cd00116 20 PKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCG 99 (319)
T ss_pred HHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHH
Confidence 3334444444444444221 22333344445555555444431 1223344445555555555555433333
Q ss_pred CCccccc---cccccccCCcccc----CCCccccCc-CCCCEEeCCCCcccCC----CcccccCCCccceeeccCCCCCC
Q 042958 452 SLGNLTN---LDALYLYDNSLSG----SIPGEIGNL-RSISNLALNNNKLSGS----IPQSLGNLSNLVILYLYNNSLFD 519 (1075)
Q Consensus 452 ~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~ 519 (1075)
.+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 100 ~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 179 (319)
T cd00116 100 VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGD 179 (319)
T ss_pred HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCch
Confidence 3333333 5555555555542 112223334 5566666666665532 22334445556666666665543
Q ss_pred CC----CccccCccccccccccccccccccCCcccccccCCCccccccchhhhhhhHhHHHhhcccccccccccccCccc
Q 042958 520 SI----PSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLA 595 (1075)
Q Consensus 520 ~~----~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~ 595 (1075)
.. +..+..+++ |++|++++|.+++.... .+...+..++
T Consensus 180 ~~~~~l~~~l~~~~~------------------L~~L~L~~n~i~~~~~~--------------------~l~~~~~~~~ 221 (319)
T cd00116 180 AGIRALAEGLKANCN------------------LEVLDLNNNGLTDEGAS--------------------ALAETLASLK 221 (319)
T ss_pred HHHHHHHHHHHhCCC------------------CCEEeccCCccChHHHH--------------------HHHHHhcccC
Confidence 11 111112222 33444444444321111 1223355678
Q ss_pred ccceeecCCCcccCcccccccc-----cccceEEEcccccccc----ccchhcccccccceeeeccccccCc----hhhh
Q 042958 596 QLEHLDLSSNRLSNSIPKSFGN-----LVKLHYLNLSNNQFSR----GIPIKLEELIHLSELDLSHNFLREA----IPSQ 662 (1075)
Q Consensus 596 ~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~----~~~~ 662 (1075)
+|++|++++|.+++.....+.. .+.|++|++++|.++. .+...+..+++|+.+++++|.++.. ....
T Consensus 222 ~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~ 301 (319)
T cd00116 222 SLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAES 301 (319)
T ss_pred CCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHH
Confidence 8999999999988633333322 3789999999999872 3445667778899999999999965 3434
Q ss_pred hccc-cccceeecCCCcc
Q 042958 663 ICIM-QSLENLNLSHNSL 679 (1075)
Q Consensus 663 ~~~~-~~L~~L~ls~N~l 679 (1075)
+-.. +.|+.|++.+|++
T Consensus 302 ~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 302 LLEPGNELESLWVKDDSF 319 (319)
T ss_pred HhhcCCchhhcccCCCCC
Confidence 4344 6799999999874
No 435
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=1.4e-19 Score=167.63 Aligned_cols=155 Identities=34% Similarity=0.593 Sum_probs=104.1
Q ss_pred CCCCCcceeeccccccCCCCccccCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccccccccccccccccce
Q 042958 358 GYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLST 437 (1075)
Q Consensus 358 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 437 (1075)
..+...+.|.|++|++ ..+|..++.+.+|+.|++++|+|. ..|..++.+++|+.|+++-|++. +.|..|+.++.|+.
T Consensus 30 f~~s~ITrLtLSHNKl-~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKL-TVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCce-eecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 3455666777777777 455666677777777777777775 56667777777777777777775 66777777777777
Q ss_pred eccccccccc-CCCCCCccccccccccccCCccccCCCccccCcCCCCEEeCCCCcccCCCcccccCCCccceeeccCCC
Q 042958 438 LSLGYNKLSG-SIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSIPQSLGNLSNLVILYLYNNS 516 (1075)
Q Consensus 438 L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 516 (1075)
|||++|.+.. .+|..|..++.|+.|||++|.+. .+|..++++++|+.|.+..|.+- ..|..++.++.|+.|.+.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 7777777653 45666777777777777777776 56666666666666666666664 455555555555555555555
Q ss_pred C
Q 042958 517 L 517 (1075)
Q Consensus 517 l 517 (1075)
+
T Consensus 185 l 185 (264)
T KOG0617|consen 185 L 185 (264)
T ss_pred e
Confidence 5
No 436
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.69 E-value=2.8e-17 Score=171.86 Aligned_cols=158 Identities=22% Similarity=0.311 Sum_probs=110.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeC--CCC--CceEeccccccccCC------CCCceecccc
Q 042958 902 DLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLD--FDN--EAHVSDFGIAKFLKP------DSSNWTELAG 971 (1075)
Q Consensus 902 ~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~--~~~--~~kl~DfGla~~~~~------~~~~~~~~~g 971 (1075)
..+...+.-|..|+++|+.|||++ +|.|||+|++||++. .|+ .+.|+|||.+---.. ..+......|
T Consensus 337 ~~s~r~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GG 413 (598)
T KOG4158|consen 337 HRSYRTGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGG 413 (598)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCC
Confidence 345566677899999999999999 999999999999994 333 578999998743221 1123344668
Q ss_pred ccCccCccccccCCC------CcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHH
Q 042958 972 TYGYVAPELAYTMKV------TEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKL 1045 (1075)
Q Consensus 972 t~~y~aPE~~~~~~~------~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1075)
....||||+....+- -.|+|.|+.|.+.||+++...||..-..... ....+....+|.. ...++
T Consensus 414 Na~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L-------~~r~Yqe~qLPal---p~~vp 483 (598)
T KOG4158|consen 414 NAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL-------DTRTYQESQLPAL---PSRVP 483 (598)
T ss_pred cceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee-------chhhhhhhhCCCC---cccCC
Confidence 889999998764321 2578999999999999999999974211100 0111222223321 23345
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1046 ISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1046 ~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
+.+.+++...+++||.+|++..-....
T Consensus 484 p~~rqlV~~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 484 PVARQLVFDLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred hHHHHHHHHHhcCCccccCCccHHHhH
Confidence 568999999999999999997654443
No 437
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.69 E-value=1.2e-17 Score=186.94 Aligned_cols=218 Identities=23% Similarity=0.275 Sum_probs=163.4
Q ss_pred eecccCceEEEEEE----ECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccchhheecC
Q 042958 822 CIGKGGQGSVYKAE----LASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHSLAMILSN 896 (1075)
Q Consensus 822 ~lG~G~~g~Vy~~~----~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~l~~~~~~ 896 (1075)
.+|+|+||.|+.++ .+.|..+|.|+.++......... ....|..++...+ ||.+|++.-.++.... +..++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~k-l~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGK-LYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccc-hhHhhhh
Confidence 37999999999762 34577899998877654433322 5667888888886 9999999765554333 3333222
Q ss_pred cc---------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCcee
Q 042958 897 NA---------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWT 967 (1075)
Q Consensus 897 ~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~ 967 (1075)
.. ....+.+.....+...++-|++++|+. +|+|||+|++||+++.+|.+++.|||+++..-+....
T Consensus 79 ~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-- 153 (612)
T KOG0603|consen 79 LRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-- 153 (612)
T ss_pred cccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence 22 223345556667778889999999999 9999999999999999999999999999876544322
Q ss_pred ccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHH
Q 042958 968 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLIS 1047 (1075)
Q Consensus 968 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1075)
+||..|||||++. ....++|.||||++++||+||..||.. +....+...++.. +......
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~~~~~----p~~l~~~ 213 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKAELEM----PRELSAE 213 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhhccCC----chhhhHH
Confidence 8999999999988 578899999999999999999999973 2223333334433 3455566
Q ss_pred HHHHHHHccCCCCCCCCCH
Q 042958 1048 IVEVAISCLDENPESRPTM 1066 (1075)
Q Consensus 1048 l~~li~~cl~~dP~~RPs~ 1066 (1075)
..+++..+..++|..|--.
T Consensus 214 a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 214 ARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHhhCHHHHhcc
Confidence 8888889999999988754
No 438
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=1.7e-16 Score=159.02 Aligned_cols=185 Identities=11% Similarity=0.025 Sum_probs=127.8
Q ss_pred CCCceecccCceEEEEEEECCCCEEEEEEccCCCCCch-hHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccchhheec
Q 042958 818 DDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEM-TFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 818 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
.+...+++|+||+||.+.- .+.+++.+.+........ .....+.+|++++++++ |+++++++++. +..+.+.+-
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---~~~lvmeyI 80 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---GRHLDRSYL 80 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---CEEEEEeee
Confidence 4567899999999998865 588888777754321111 11225889999999994 58899998862 122222111
Q ss_pred Ccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecC-CCCCeeeCCCCCceEeccccccccCCCCCc-----ee-
Q 042958 896 NNA-AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDI-SSKNVLLDFDNEAHVSDFGIAKFLKPDSSN-----WT- 967 (1075)
Q Consensus 896 ~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-k~~Nill~~~~~~kl~DfGla~~~~~~~~~-----~~- 967 (1075)
... -..... .....++.|++++++++|+. +|+|||| ||+||+++.++.++|+|||+|......... ..
T Consensus 81 ~G~~L~~~~~-~~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rD 156 (218)
T PRK12274 81 AGAAMYQRPP-RGDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLARED 156 (218)
T ss_pred cCccHHhhhh-hhhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHH
Confidence 111 000111 12245788999999999999 9999999 799999999999999999999865543321 00
Q ss_pred -------ccccccCccCccccccC-CCC-cccchHhHHHHHHHHHhCCCCCC
Q 042958 968 -------ELAGTYGYVAPELAYTM-KVT-EKCDVYSFGVLALEVIKGKHPRD 1010 (1075)
Q Consensus 968 -------~~~gt~~y~aPE~~~~~-~~~-~~~Dv~s~G~vl~elltg~~p~~ 1010 (1075)
-...++.|++|+...-- ..+ .+.+.++-|.-+|.++|++.|+.
T Consensus 157 l~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 157 LRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 12257778888754322 233 56799999999999999999864
No 439
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.68 E-value=3.6e-17 Score=168.07 Aligned_cols=180 Identities=12% Similarity=0.155 Sum_probs=126.5
Q ss_pred cHHHHH--HHhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHH------HHHHHHHHhcCCcCcee
Q 042958 806 VYEEII--RATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQE------FLNEVKALTEIRHRNIV 877 (1075)
Q Consensus 806 ~~~e~~--~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~------~~~E~~~l~~l~h~niv 877 (1075)
.|.++. ....+|+..+.+|.|+||.||.++. ++..+|||.+.......+...+. +.+|+..+.++.|++|.
T Consensus 20 ~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~ 98 (232)
T PRK10359 20 KYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLA 98 (232)
T ss_pred cHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCC
Confidence 344443 3368999999999999999999866 47789999997655444433333 68999999999999999
Q ss_pred eEEEEeecccc-------chhheecCccccCCCC-HH-HHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCc
Q 042958 878 KFYGFCSHVRH-------SLAMILSNNAAAKDLG-WT-RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEA 948 (1075)
Q Consensus 878 ~l~~~~~~~~~-------~l~~~~~~~~~~~~l~-~~-~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 948 (1075)
.+.+++..... ...++++...+ ..+. +. .......+++.++..+|+. +++|||++|+||+++.++ +
T Consensus 99 ~~~d~~~~~~~~~~~~~~~~~lvmEyi~G-~tL~~~~~~~~~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 99 SLNDFYLLAERKTLRYAHTYIMLIEYIEG-VELNDMPEISEDVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cceEeeeecccccccccCCeEEEEEEECC-ccHHHhhhccHHHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-E
Confidence 99988654321 11222222221 1111 00 0123567999999999999 999999999999999988 9
Q ss_pred eEeccccccccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHH
Q 042958 949 HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVI 1003 (1075)
Q Consensus 949 kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ell 1003 (1075)
+++|||..+....+... ..+.....+..++|+|++|+.+....
T Consensus 174 ~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999988755322111 11334445667899999999876654
No 440
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.67 E-value=1.5e-16 Score=162.37 Aligned_cols=136 Identities=19% Similarity=0.232 Sum_probs=97.5
Q ss_pred CceecccCceEEEEEEECCCCEEEEEEccCCCCCchh-----------------------HHHHHHHHHHHHhcCCcCce
Q 042958 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMT-----------------------FQQEFLNEVKALTEIRHRNI 876 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~h~ni 876 (1075)
...||+|+||.||+|...+|+.||||+++........ .......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999998778999999998754221111 01223459999999987776
Q ss_pred eeEEEEeeccccchhheecCc-------cccCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEEecCCCCCeeeCCCCCc
Q 042958 877 VKFYGFCSHVRHSLAMILSNN-------AAAKDLGWTRRMNVIKGISDALSYM-HNDCFPPIVHRDISSKNVLLDFDNEA 948 (1075)
Q Consensus 877 v~l~~~~~~~~~~l~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk~~Nill~~~~~~ 948 (1075)
.....+... ...+.|.+... .....++..+..+++.|++.|+.|+ |+. +|+||||||+||+++ ++.+
T Consensus 82 ~~p~~~~~~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~~~v 156 (190)
T cd05147 82 PCPEPILLK-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-DGKL 156 (190)
T ss_pred CCCcEEEec-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-CCcE
Confidence 433322221 22222222211 1124577888899999999999999 687 999999999999998 5789
Q ss_pred eEeccccccccC
Q 042958 949 HVSDFGIAKFLK 960 (1075)
Q Consensus 949 kl~DfGla~~~~ 960 (1075)
+++|||+|....
T Consensus 157 ~LiDFG~a~~~~ 168 (190)
T cd05147 157 YIIDVSQSVEHD 168 (190)
T ss_pred EEEEccccccCC
Confidence 999999998643
No 441
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=3.4e-17 Score=179.76 Aligned_cols=142 Identities=24% Similarity=0.452 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCC------CceeccccccCccCccccc
Q 042958 909 MNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS------SNWTELAGTYGYVAPELAY 982 (1075)
Q Consensus 909 ~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~------~~~~~~~gt~~y~aPE~~~ 982 (1075)
..++.|++.|++| + +.+|||+||.||++..+..+||.|||+........ ...+...||..||+||.+.
T Consensus 362 ~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~ 435 (516)
T KOG1033|consen 362 LDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIR 435 (516)
T ss_pred HHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHh
Confidence 4588899999999 5 88999999999999999999999999998766544 2345568999999999999
Q ss_pred cCCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCC
Q 042958 983 TMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPE 1061 (1075)
Q Consensus 983 ~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 1061 (1075)
+..|+.|+||||+|++++|++. -..+++ .......+.+..+|+. .. ...+.=+.++.+++.+.|.
T Consensus 436 g~~y~~kvdIyaLGlil~EL~~~f~T~~e-----------r~~t~~d~r~g~ip~~--~~-~d~p~e~~ll~~lls~~p~ 501 (516)
T KOG1033|consen 436 GQQYSEKVDIYALGLILAELLIQFSTQFE-----------RIATLTDIRDGIIPPE--FL-QDYPEEYTLLQQLLSPSPE 501 (516)
T ss_pred hhhhhhhcchhhHHHHHHHHHHHhccHHH-----------HHHhhhhhhcCCCChH--Hh-hcCcHHHHHHHHhcCCCcc
Confidence 9999999999999999999998 444433 1223445555555521 11 1112345799999999999
Q ss_pred CCCCHHHHH
Q 042958 1062 SRPTMPKVS 1070 (1075)
Q Consensus 1062 ~RPs~~evl 1070 (1075)
+||++.++.
T Consensus 502 ~RP~~~~~~ 510 (516)
T KOG1033|consen 502 ERPSAIEVA 510 (516)
T ss_pred cCchHHHHh
Confidence 999776654
No 442
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.65 E-value=8.6e-16 Score=157.79 Aligned_cols=137 Identities=19% Similarity=0.219 Sum_probs=100.0
Q ss_pred CceecccCceEEEEEEECCCCEEEEEEccCCCCCch-----------------------hHHHHHHHHHHHHhcCCcCce
Q 042958 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEM-----------------------TFQQEFLNEVKALTEIRHRNI 876 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~h~ni 876 (1075)
...||+|+||.||+|...+|+.||||+++....... .....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 467999999999999777899999999876422100 001234678999999999887
Q ss_pred eeEEEEeeccccchhheecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEecCCCCCeeeCCCCCc
Q 042958 877 VKFYGFCSHVRHSLAMILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHN-DCFPPIVHRDISSKNVLLDFDNEA 948 (1075)
Q Consensus 877 v~l~~~~~~~~~~l~~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~ 948 (1075)
.....+.... ..+.+.+.... ....++..+..+++.|++.++.++|+ . +|+||||||+||+++ ++.+
T Consensus 82 ~~p~~~~~~~-~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 82 PVPEPILLKK-NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred CCceEEEecC-CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-CCCE
Confidence 5433332222 22222222111 12235667888999999999999999 8 999999999999999 8999
Q ss_pred eEeccccccccCC
Q 042958 949 HVSDFGIAKFLKP 961 (1075)
Q Consensus 949 kl~DfGla~~~~~ 961 (1075)
+++|||+++....
T Consensus 157 ~liDFG~a~~~~~ 169 (190)
T cd05145 157 YIIDVSQAVELDH 169 (190)
T ss_pred EEEEcccceecCC
Confidence 9999999987653
No 443
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.63 E-value=5.6e-16 Score=174.44 Aligned_cols=200 Identities=24% Similarity=0.393 Sum_probs=142.0
Q ss_pred HhcCCcCceeeEEEEeeccccchhheecCc---------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe-EEecCCC
Q 042958 868 LTEIRHRNIVKFYGFCSHVRHSLAMILSNN---------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPI-VHRDISS 937 (1075)
Q Consensus 868 l~~l~h~niv~l~~~~~~~~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i-vH~Dlk~ 937 (1075)
|+.+.|.|+.+++|.+.+....+.++-... .....++|.-...++++|+.|++|+|.. +| +|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence 456789999999999988744433321111 1244578888899999999999999998 55 9999999
Q ss_pred CCeeeCCCCCceEeccccccccCC--CCCceeccccccCccCccccccCC-------CCcccchHhHHHHHHHHHhCCCC
Q 042958 938 KNVLLDFDNEAHVSDFGIAKFLKP--DSSNWTELAGTYGYVAPELAYTMK-------VTEKCDVYSFGVLALEVIKGKHP 1008 (1075)
Q Consensus 938 ~Nill~~~~~~kl~DfGla~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~s~G~vl~elltg~~p 1008 (1075)
+|+++|....+|++|||+...... .........-..-|.|||.++... .+.+.||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 999999999999999999987643 111122223456799999987641 46779999999999999999999
Q ss_pred CCccCccccchhhhhhhhhhccC-CC-CCCCCcC-cHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1009 RDFISSMSSSSLNLNIALDEMLD-PR-LPTPSCI-VQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
|+......... +....+.+ .. ...|.-. ..+....+..++..||..+|.+||++++|...++
T Consensus 158 ~~~~~~~~~~~----eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 158 FDLRNLVEDPD----EIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred cccccccCChH----HHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 98543322221 11111111 11 1111111 1133446999999999999999999999988765
No 444
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.61 E-value=4.8e-16 Score=182.18 Aligned_cols=207 Identities=23% Similarity=0.312 Sum_probs=141.7
Q ss_pred hcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhh
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAM 892 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~ 892 (1075)
..+|...+.|..|+||.||..+++ +.+.+|+|+ .+. .-+.+- ++.....|.+| |=|. .
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq--------~lilRn--ilt~a~npfvv---gDc~-------t 140 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQ--------NLILRN--ILTFAGNPFVV---GDCA-------T 140 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-ccc--------chhhhc--cccccCCccee---chhh-------h
Confidence 468888999999999999999776 567888854 221 111111 34444556655 1111 1
Q ss_pred eecCccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCC--------
Q 042958 893 ILSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSS-------- 964 (1075)
Q Consensus 893 ~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-------- 964 (1075)
.+ .....++.. .+.|++|+|+. +|+|||+||+|.+++.-|++|+.|||+++.......
T Consensus 141 ll---k~~g~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I 206 (1205)
T KOG0606|consen 141 LL---KNIGPLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHI 206 (1205)
T ss_pred hc---ccCCCCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcch
Confidence 11 111122222 27899999999 999999999999999999999999999875432110
Q ss_pred -------ceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 965 -------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 965 -------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
.....+||+.|+|||++..+.|...+|+|++|+++||.+-|..||......+ .+..++......+
T Consensus 207 ~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee--------lfg~visd~i~wp 278 (1205)
T KOG0606|consen 207 EKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE--------LFGQVISDDIEWP 278 (1205)
T ss_pred HHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH--------HHhhhhhhhcccc
Confidence 0234689999999999999999999999999999999999999997543211 1111111111111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCC
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRP 1064 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RP 1064 (1075)
.. ......+..+++.+.++.+|.+|-
T Consensus 279 E~-dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 279 EE-DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cc-CcCCCHHHHHHHHHHHHhChHhhc
Confidence 11 222334688999999999999986
No 445
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=3.3e-15 Score=179.75 Aligned_cols=240 Identities=20% Similarity=0.201 Sum_probs=162.7
Q ss_pred HHHHHhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC---cCceeeEEEEeec
Q 042958 809 EIIRATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR---HRNIVKFYGFCSH 885 (1075)
Q Consensus 809 e~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 885 (1075)
+.....+.|.+.+.+|+|+||+||+|...+|+.||+|+-+.+...+--...+ ++.+|+ -+-|+.+...+..
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q------~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQ------VMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHH------HHHhhchhhhcchHHHHHHHcc
Confidence 4445567888999999999999999988889999999987765554332233 333333 1222222221111
Q ss_pred cccc-hhhee-------cCccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCC-------CCCceE
Q 042958 886 VRHS-LAMIL-------SNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDF-------DNEAHV 950 (1075)
Q Consensus 886 ~~~~-l~~~~-------~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-------~~~~kl 950 (1075)
.+.. +...+ ......+.++|.-.+.++.|+++.+++||.. +|||+||||+|+++.. ..-++|
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred CCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence 1111 11111 1112566789999999999999999999999 9999999999999953 235999
Q ss_pred eccccccccC--CCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhh
Q 042958 951 SDFGIAKFLK--PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDE 1028 (1075)
Q Consensus 951 ~DfGla~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1028 (1075)
+|||-+..+. ++.......++|-.+-.+|+..|+.++..+|.|.++.+++-|+.|+.-- ...+ ...
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-~~~g-----------~~~ 910 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-VKNG-----------SSW 910 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-hcCC-----------cce
Confidence 9999997654 4445677788999999999999999999999999999999999998552 0000 000
Q ss_pred ccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhhhc
Q 042958 1029 MLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQLLK 1074 (1075)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1074 (1075)
.+...++. ....+ .+.++...+++.|...=|...++...++
T Consensus 911 ~~~~~~~R--y~~~~---~W~~~F~~lLN~~~~~~p~l~~lr~~~~ 951 (974)
T KOG1166|consen 911 MVKTNFPR--YWKRD---MWNKFFDLLLNPDCDTLPNLQELRTELE 951 (974)
T ss_pred eccccchh--hhhHH---HHHHHHHHHhCcCcccchhHHHHHHHHH
Confidence 11111111 11122 2556666777766666666666665543
No 446
>PLN03150 hypothetical protein; Provisional
Probab=99.56 E-value=9.4e-15 Score=176.36 Aligned_cols=148 Identities=32% Similarity=0.532 Sum_probs=103.4
Q ss_pred hhHHHHHHHHHhccCCCCCCCcCCCCcCCCCCCCCCccceEEeCCC-----CceeEEEecccccccccCCcccCCCCCcc
Q 042958 2 EEAHALLRWKTSLQNHNNGSLLSSWTLNNVTKTSPCAWVGIHCNRG-----GRVNSINLTSIGLKGMLHDFSFSSFPHLA 76 (1075)
Q Consensus 2 ~~~~all~~k~~~~~~~~~~~l~sw~~~~~~~~~~c~w~gv~C~~~-----~~v~~l~l~~~~l~g~~~~~~~~~l~~L~ 76 (1075)
+|.+||++||+++.++ . ..+|.++.. ....|.|.||.|+.. .+|+.|+|+++++.|.+++. ++.+++|+
T Consensus 372 ~~~~aL~~~k~~~~~~-~---~~~W~g~~C-~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~-i~~L~~L~ 445 (623)
T PLN03150 372 EEVSALQTLKSSLGLP-L---RFGWNGDPC-VPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPND-ISKLRHLQ 445 (623)
T ss_pred hHHHHHHHHHHhcCCc-c---cCCCCCCCC-CCcccccccceeeccCCCCceEEEEEECCCCCccccCCHH-HhCCCCCC
Confidence 5889999999999654 2 247963110 000137999999632 24777777777777777765 77777777
Q ss_pred EEEccCCCccCCCCccccccCCCceeecccCcccccCCCCCCCCCCCcEEEccCcccCCCCCcccccc-CCcceeecccc
Q 042958 77 YLDLWHNQLYGNIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRL-SSLNYLALYSN 155 (1075)
Q Consensus 77 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l-~~L~~L~L~~n 155 (1075)
.|+|++|.+.|.+|+.++.+++|++|+|++|.++|.+|..++++++|++|+|++|+++|.+|..++.+ .++..+++.+|
T Consensus 446 ~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N 525 (623)
T PLN03150 446 SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525 (623)
T ss_pred EEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCC
Confidence 77777777777777777777777777777777777777777777777777777777777777765542 23444444444
No 447
>PRK10345 hypothetical protein; Provisional
Probab=99.51 E-value=7.2e-14 Score=143.80 Aligned_cols=131 Identities=15% Similarity=0.173 Sum_probs=92.2
Q ss_pred CCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-----CcCceeeEEEEeecccc--c
Q 042958 817 FDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-----RHRNIVKFYGFCSHVRH--S 889 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~~--~ 889 (1075)
....+.||+|+||.||. .-.++.. +||++..... ...+.+.+|+++++.+ .||||++++|++.+... .
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 34457899999999996 3234444 7998865322 2346799999999999 57999999999987642 2
Q ss_pred hh-heecCcc-cc---------CCCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEEecCCCCCeeeCCC----CCceEecc
Q 042958 890 LA-MILSNNA-AA---------KDLGWTRRMNVIKGISDAL-SYMHNDCFPPIVHRDISSKNVLLDFD----NEAHVSDF 953 (1075)
Q Consensus 890 l~-~~~~~~~-~~---------~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~Df 953 (1075)
+. .+++..+ .+ ..+++. ..++.+++.++ +|||++ +|+||||||+||+++.. +.++|+||
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 22 2233211 11 123333 35577888777 999999 99999999999999743 37999995
Q ss_pred cccc
Q 042958 954 GIAK 957 (1075)
Q Consensus 954 Gla~ 957 (1075)
+.+.
T Consensus 154 ~G~~ 157 (210)
T PRK10345 154 IGES 157 (210)
T ss_pred CCCc
Confidence 4443
No 448
>smart00090 RIO RIO-like kinase.
Probab=99.51 E-value=4.9e-14 Score=149.04 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=100.1
Q ss_pred hcCCCCCceecccCceEEEEEE--ECCCCEEEEEEccCCCCCc---------------------hhHHHHHHHHHHHHhc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAE--LASGEIVAVKKFHSPLPGE---------------------MTFQQEFLNEVKALTE 870 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~~---------------------~~~~~~~~~E~~~l~~ 870 (1075)
..-|++.+.||+|+||.||+|. ..+|+.||||+++...... ......+..|+..+++
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3457888999999999999997 5689999999987532110 0012346789999999
Q ss_pred CCcC--ceeeEEEEeeccccchhheecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEEecCCCCCe
Q 042958 871 IRHR--NIVKFYGFCSHVRHSLAMILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPP-IVHRDISSKNV 940 (1075)
Q Consensus 871 l~h~--niv~l~~~~~~~~~~l~~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk~~Ni 940 (1075)
+.+. .+.+++++. ...+.+.+.... ........+...++.|++.|+.+||+. + |+||||||+||
T Consensus 107 L~~~~i~~p~~~~~~---~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NI 180 (237)
T smart00090 107 LYEAGVPVPKPIAWR---RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNI 180 (237)
T ss_pred HHhcCCCCCeeeEec---CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhE
Confidence 9753 344555432 222222221110 112234445678999999999999999 8 99999999999
Q ss_pred eeCCCCCceEeccccccccC
Q 042958 941 LLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 941 ll~~~~~~kl~DfGla~~~~ 960 (1075)
+++ +++++++|||.|....
T Consensus 181 li~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEE-CCCEEEEEChhhhccC
Confidence 999 8899999999988644
No 449
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.51 E-value=5.2e-14 Score=145.98 Aligned_cols=147 Identities=19% Similarity=0.168 Sum_probs=103.4
Q ss_pred HHHHHHhcCCCCCceecccCceEEEEEEECCCCEEEEEEccCCCCCch-------------------hHHHHHHHHHHHH
Q 042958 808 EEIIRATNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEM-------------------TFQQEFLNEVKAL 868 (1075)
Q Consensus 808 ~e~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~~l 868 (1075)
.++......|...+.||+|+||.||+|...+|+.||||++........ .....+..|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 345555556888899999999999999888899999998764321100 0112367889999
Q ss_pred hcCCcC--ceeeEEEEeeccccchhheecCccccCCCCH-HHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC
Q 042958 869 TEIRHR--NIVKFYGFCSHVRHSLAMILSNNAAAKDLGW-TRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD 945 (1075)
Q Consensus 869 ~~l~h~--niv~l~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 945 (1075)
..+.|+ .++..++.+ ...+.+.+.....-..+.. .....++.+++.++.++|+. +|+||||||+||+++++
T Consensus 88 ~~l~~~~i~v~~~~~~~---~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 88 KALYEEGFPVPKPIDWN---RHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDD 161 (198)
T ss_pred HHHHHcCCCCCceeecC---CceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCC
Confidence 998777 455555432 2222222211111111111 34567899999999999998 99999999999999999
Q ss_pred CCceEeccccccccC
Q 042958 946 NEAHVSDFGIAKFLK 960 (1075)
Q Consensus 946 ~~~kl~DfGla~~~~ 960 (1075)
+.++|+|||++....
T Consensus 162 ~~~~liDfg~~~~~~ 176 (198)
T cd05144 162 EKIYIIDWPQMVSTD 176 (198)
T ss_pred CcEEEEECCccccCC
Confidence 999999999996544
No 450
>PLN03150 hypothetical protein; Provisional
Probab=99.49 E-value=5.6e-14 Score=169.66 Aligned_cols=120 Identities=33% Similarity=0.488 Sum_probs=83.4
Q ss_pred ccceeecCCCcccCcccccccccccceEEEccccccccccchhcccccccceeeeccccccCchhhhhccccccceeecC
Q 042958 596 QLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFLREAIPSQICIMQSLENLNLS 675 (1075)
Q Consensus 596 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~~L~~L~ls 675 (1075)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+|+|.+|..+..+++|+.|||++|++++.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36677777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCccccCChhhhcccc-cccEEeecCCccCCCCCCCccccccccccccCCccccCCCCCCCcccc
Q 042958 676 HNSLVGLIPSCFEKMH-GLLRIDISYNELQGPIPNSIAFRDAPIEALQGNKGLCGDVKGLPSCKT 739 (1075)
Q Consensus 676 ~N~l~~~~p~~~~~~~-~l~~l~~s~N~~~~~~p~~~~~~~~~~~~~~~n~~lcg~~~~l~~c~~ 739 (1075)
+|.++|.+|..+..+. .+.. ..+.+|+.+||.+ +++.|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~-----------------------l~~~~N~~lc~~p-~l~~C~~ 539 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRAS-----------------------FNFTDNAGLCGIP-GLRACGP 539 (623)
T ss_pred CCcccccCChHHhhccccCce-----------------------EEecCCccccCCC-CCCCCcc
Confidence 7777777776665431 1222 2466777788743 4567753
No 451
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.39 E-value=9.5e-13 Score=135.41 Aligned_cols=135 Identities=24% Similarity=0.266 Sum_probs=89.1
Q ss_pred CceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHH---------------------HHHHHHHHhcCCcCc--e
Q 042958 820 EHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQE---------------------FLNEVKALTEIRHRN--I 876 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~---------------------~~~E~~~l~~l~h~n--i 876 (1075)
.+.||+|+||.||+|...+|+.||||++............. ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999987789999999986543221111111 135566666654432 4
Q ss_pred eeEEEEeeccccchhheecCc-----cccCCCCH-HHHHHHHHHHHHHHHHHHh-CCCCCeEEecCCCCCeeeCCCCCce
Q 042958 877 VKFYGFCSHVRHSLAMILSNN-----AAAKDLGW-TRRMNVIKGISDALSYMHN-DCFPPIVHRDISSKNVLLDFDNEAH 949 (1075)
Q Consensus 877 v~l~~~~~~~~~~l~~~~~~~-----~~~~~l~~-~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~k 949 (1075)
.+.+++. ...+.+.+... ........ .+..+++.+++.++.++|. . +|+||||||+||+++ ++.++
T Consensus 82 ~~~~~~~---~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~~~~~ 154 (187)
T cd05119 82 PKPIDLN---RHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-DGKVY 154 (187)
T ss_pred CceEecC---CCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-CCcEE
Confidence 4444321 11111111111 00011111 5667899999999999999 7 999999999999999 99999
Q ss_pred EeccccccccCC
Q 042958 950 VSDFGIAKFLKP 961 (1075)
Q Consensus 950 l~DfGla~~~~~ 961 (1075)
++|||.+.....
T Consensus 155 liDfg~a~~~~~ 166 (187)
T cd05119 155 IIDVPQAVEIDH 166 (187)
T ss_pred EEECcccccccC
Confidence 999999976543
No 452
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.38 E-value=3.7e-14 Score=155.58 Aligned_cols=175 Identities=35% Similarity=0.499 Sum_probs=92.2
Q ss_pred ccccccceecccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCccccCCCccccee
Q 042958 311 NLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSML 390 (1075)
Q Consensus 311 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 390 (1075)
.+.--...+|+.|++. .+|..+..+..|+.+.|.+|.+. .+|..+..+..|+.|+|+.|++ ...|..++.|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~Nql-S~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQL-SHLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchh-hcCChhhhcCc-ceeE
Confidence 3444455566666666 55666666666666666666665 4555555555555555555555 34444444443 4555
Q ss_pred eeccccccccCChhhccCCCCCeEEeeccccccccccccccccccceecccccccccCCCCCCccccccccccccCCccc
Q 042958 391 SLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLS 470 (1075)
Q Consensus 391 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 470 (1075)
-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|..++.| .|..||++.|+++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis 224 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS 224 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee
Confidence 55555553 44555554455555555555554 34444555555555555555554 333344432 2444555555555
Q ss_pred cCCCccccCcCCCCEEeCCCCccc
Q 042958 471 GSIPGEIGNLRSISNLALNNNKLS 494 (1075)
Q Consensus 471 ~~~p~~~~~l~~L~~L~L~~N~l~ 494 (1075)
.+|-.|.+++.|++|-|.+|+|.
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCC
Confidence 44555555555555555555554
No 453
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.38 E-value=2e-12 Score=154.86 Aligned_cols=139 Identities=19% Similarity=0.292 Sum_probs=99.6
Q ss_pred hcCCCCCceecccCceEEEEEEECCCCEEEEEEc-cCCCCC----chhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELASGEIVAVKKF-HSPLPG----EMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~-~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 888 (1075)
...|...+.||+|+||.||+|.+... .+++|+. .+.... .....+++.+|+++++.++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 44556788999999999999987644 3444432 221111 11224568899999999999999887776665333
Q ss_pred chhheecCccccCCCCH--HHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 889 SLAMILSNNAAAKDLGW--TRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 889 ~l~~~~~~~~~~~~l~~--~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
. .+++++. .+..+.. ..+..++.++++++.|||+. +++|||+||+||++ .++.++|+|||+++..
T Consensus 411 ~-~lv~E~~-~g~~L~~~l~~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 411 K-TIVMEYI-GGKDLKDVLEGNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred C-EEEEEec-CCCcHHHHHHHHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 2 2222222 2333322 23678999999999999999 99999999999999 6789999999999763
No 454
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.36 E-value=2.3e-12 Score=134.00 Aligned_cols=131 Identities=18% Similarity=0.298 Sum_probs=91.4
Q ss_pred eecccCceEEEEEEECCCCEEEEEEccCCCCCc-----hhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecC
Q 042958 822 CIGKGGQGSVYKAELASGEIVAVKKFHSPLPGE-----MTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSN 896 (1075)
Q Consensus 822 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~ 896 (1075)
.||+|+||.||+|.+ +|..|++|+........ .....++.+|++++..++|+++.....++...... .++++.
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~-~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNK-TIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC-EEEEEE
Confidence 389999999999985 47889999865432111 11235678899999999888654443333332221 122222
Q ss_pred ccccCCCCHHHHH---HHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccccc
Q 042958 897 NAAAKDLGWTRRM---NVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFL 959 (1075)
Q Consensus 897 ~~~~~~l~~~~~~---~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~ 959 (1075)
. .+..+...... .++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.++..
T Consensus 79 ~-~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 79 I-EGKPLKDVIEEGNDELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred E-CCccHHHHHhhcHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 1 12222211111 7899999999999999 999999999999999 899999999998753
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.35 E-value=5e-14 Score=154.62 Aligned_cols=172 Identities=36% Similarity=0.502 Sum_probs=88.4
Q ss_pred cccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCCCccccccccccccccc
Q 042958 266 NLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLS 345 (1075)
Q Consensus 266 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 345 (1075)
--...||+.|++. .+|..+..+-.|+.+.|..|.+. .+|.+++++..|++|+|+.|+++ ..|..++.|+ |+.|.++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 3344555555555 45555555555555555555555 44555555555555555555555 4444444443 4555555
Q ss_pred CCcccccCCCcCCCCCCcceeeccccccCCCCccccCCCcccceeeeccccccccCChhhccCCCCCeEEeecccccccc
Q 042958 346 GNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSI 425 (1075)
Q Consensus 346 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 425 (1075)
+|+++ .+|..++....|..|+.+.|.+ ..+|..++++.+|+.|.+..|++. .+|..+..| .|..||+|.|+++ .+
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei-~slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEI-QSLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YL 226 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhh-hhchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ec
Confidence 55555 4455555555555555555555 344445555555555555555554 334444433 3455555555554 34
Q ss_pred ccccccccccceecccccccc
Q 042958 426 PSEFGNLRSLSTLSLGYNKLS 446 (1075)
Q Consensus 426 ~~~~~~l~~L~~L~L~~N~l~ 446 (1075)
|-.|.+|+.|++|.|.+|.+.
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred chhhhhhhhheeeeeccCCCC
Confidence 445555555555555555554
No 456
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.34 E-value=5.2e-12 Score=132.73 Aligned_cols=130 Identities=16% Similarity=0.306 Sum_probs=96.0
Q ss_pred ceecccCceEEEEEEECCCCEEEEEEccCCCCCch-----hHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheec
Q 042958 821 HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEM-----TFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILS 895 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~ 895 (1075)
+.||+|++|.||+|.. +|..|++|+......... .....+.+|++++..++|+++.....++......+ ++++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~-lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFI-IVME 79 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCE-EEEE
Confidence 5799999999999987 588899998654322111 12346788999999999998877666654433222 1221
Q ss_pred CccccCCC-------CHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 896 NNAAAKDL-------GWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 896 ~~~~~~~l-------~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
... +..+ .+ .+..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+..
T Consensus 80 ~~~-G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIE-GEPLKDLINSNGM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeC-CcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 111 1111 12 5678999999999999999 999999999999999 78999999999875
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32 E-value=3.6e-13 Score=160.03 Aligned_cols=247 Identities=21% Similarity=0.268 Sum_probs=173.0
Q ss_pred hcCCCCCceecccCceEEEEEEE--CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCC-cCceeeEEEEeeccccch
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAEL--ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIR-HRNIVKFYGFCSHVRHSL 890 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~l 890 (1075)
...|...+.||+|+|+.|-.+.. .....+|+|.+.... .+.........|..+-+.+. |+|++.+++...+.+..+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 34567778899999999988844 335567777776553 23334456667888877776 999999999877655543
Q ss_pred hheecCc---------c-ccCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEEecCCCCCeeeCCCC-CceEeccccccc
Q 042958 891 AMILSNN---------A-AAKDLGWTRRMNVIKGISDALSYMH-NDCFPPIVHRDISSKNVLLDFDN-EAHVSDFGIAKF 958 (1075)
Q Consensus 891 ~~~~~~~---------~-~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlk~~Nill~~~~-~~kl~DfGla~~ 958 (1075)
...-... . .....+......+..|+..|+.|+| .. ++.|||+||+|.+++..+ ..+++|||+|..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 3321100 0 1112344455678899999999999 77 999999999999999999 999999999987
Q ss_pred cCC-CCC--ceecccc-ccCccCccccccCC-CCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCC
Q 042958 959 LKP-DSS--NWTELAG-TYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPR 1033 (1075)
Q Consensus 959 ~~~-~~~--~~~~~~g-t~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 (1075)
+.. ... .....+| ++.|+|||...+.. ..+..|+||.|+++..+++|..||+......... ..+...+
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-------~~~~~~~ 247 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-------SSWKSNK 247 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-------eeecccc
Confidence 766 332 2344678 99999999988754 4677899999999999999999998654432111 1111111
Q ss_pred CCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1034 LPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1034 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
.......+........++..+++..+|..|.+.+++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 248 GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 00001112233345778888999999999999887653
No 458
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.32 E-value=2.3e-12 Score=149.38 Aligned_cols=195 Identities=41% Similarity=0.571 Sum_probs=88.6
Q ss_pred ceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCCCCcccc-cccccccccccCcCCCCcccCCCccCcEEEccCC
Q 042958 221 TLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLT-NLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYN 299 (1075)
Q Consensus 221 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 299 (1075)
.+.+..|.+.. ....+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 34444444421 1222333455555555555555 3444444442 5555555555555 23344555555555555555
Q ss_pred CCCCCcCCCCCccccccceecccccccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCcc
Q 042958 300 KLNGIIPHSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPS 379 (1075)
Q Consensus 300 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~ 379 (1075)
++.. +|...+.+++|+.|++++|++. .+|........|++|.+++|.+. ..+..+..+.++..+.+.+|++. ..+.
T Consensus 174 ~l~~-l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLSD-LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhhh-hhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 5552 2333334455555555555555 34433333444555555555322 23334444444444444444442 1233
Q ss_pred ccCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccccc
Q 042958 380 ELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGS 424 (1075)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 424 (1075)
.+..+.++++|++++|+++.... ++.+.+++.|++++|.+...
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCcccccc
Confidence 34444444444444444432211 44444444444444444433
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.32 E-value=1.8e-12 Score=150.20 Aligned_cols=198 Identities=43% Similarity=0.621 Sum_probs=119.8
Q ss_pred eEeccCCCCCCccCCCCcccccccccccccccCcCCCCcccCCCc-cCcEEEccCCCCCCCcCCCCCccccccceecccc
Q 042958 245 MLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLR-SLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNN 323 (1075)
Q Consensus 245 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 323 (1075)
.++++.|.+... ...+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 567777776422 223444466777777777777 3444455553 6777777777776 34455666777777777777
Q ss_pred cccCCCCcccccccccccccccCCcccccCCCcCCCCCCcceeeccccccCCCCccccCCCcccceeeeccccccccCCh
Q 042958 324 SLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPH 403 (1075)
Q Consensus 324 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 403 (1075)
+++ .+|...+.+++|+.|++++|+++ .+|........|++|.+++|.+ ...+..+.++.++..+.+++|++. ..+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~-~~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSI-IELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcc-eecchhhhhcccccccccCCceee-eccc
Confidence 776 44444446666777777777776 4555544555566666666643 234455566666666666666664 3355
Q ss_pred hhccCCCCCeEEeeccccccccccccccccccceecccccccccCCCC
Q 042958 404 SLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPH 451 (1075)
Q Consensus 404 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 451 (1075)
.++.++++++|++++|.++.+.+ ++.+.+|+.|++++|.+....|.
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 56666666666666666664332 56666666666666666644443
No 460
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.30 E-value=1.1e-11 Score=122.75 Aligned_cols=133 Identities=14% Similarity=0.125 Sum_probs=103.0
Q ss_pred CCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCc--CceeeEEEEeeccccchhheecC
Q 042958 819 DEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRH--RNIVKFYGFCSHVRHSLAMILSN 896 (1075)
Q Consensus 819 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~l~~~~~~ 896 (1075)
+.+.+|+|.++.||++... +..+++|....... ...+..|+.+++.++| .++++++++....+. ..++++.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~-~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGW-SYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec-CCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCc-cEEEEEe
Confidence 3567999999999999876 47899999865422 3578899999999976 588998887765432 2222222
Q ss_pred c--cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 897 N--AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 897 ~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
. .....++......++.+++++++++|.....+++|+|++|+||+++..+.++++|||.++.
T Consensus 75 ~~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 2 1122235677888999999999999997545799999999999999989999999998875
No 461
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.24 E-value=3.2e-11 Score=127.97 Aligned_cols=136 Identities=15% Similarity=0.208 Sum_probs=94.0
Q ss_pred Cceec-ccCceEEEEEEECCCCEEEEEEccCCCC----------CchhHHHHHHHHHHHHhcCCcCce--eeEEEEeecc
Q 042958 820 EHCIG-KGGQGSVYKAELASGEIVAVKKFHSPLP----------GEMTFQQEFLNEVKALTEIRHRNI--VKFYGFCSHV 886 (1075)
Q Consensus 820 ~~~lG-~G~~g~Vy~~~~~~g~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 886 (1075)
...|| .|+.|+||+++.. +..+|||++..... ........+.+|++++..++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999999776 78899998854210 111234568899999999998874 6777765433
Q ss_pred ccchh---heecCccccCCCCHH-----HHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 887 RHSLA---MILSNNAAAKDLGWT-----RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 887 ~~~l~---~~~~~~~~~~~l~~~-----~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
..... ++++...+...+... .....+.+++.++.+||+. ||+||||||.||+++.++.++|+|||.++.
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 22211 222212211111100 0123467899999999999 999999999999999999999999998875
Q ss_pred c
Q 042958 959 L 959 (1075)
Q Consensus 959 ~ 959 (1075)
.
T Consensus 192 ~ 192 (239)
T PRK01723 192 R 192 (239)
T ss_pred C
Confidence 3
No 462
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.15 E-value=8.4e-13 Score=137.57 Aligned_cols=250 Identities=21% Similarity=0.273 Sum_probs=120.7
Q ss_pred cCCCCCccEEEccCCCccC----CCCccccccCCCceeecccC---cccccCCCC-------CCCCCCCcEEEccCcccC
Q 042958 69 FSSFPHLAYLDLWHNQLYG----NIPPQIGNISRLKYLDLSSN---LFFGTIPPE-------IGHLSYLKTLQLFENQLN 134 (1075)
Q Consensus 69 ~~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~n---~l~~~~p~~-------l~~l~~L~~L~Ls~n~l~ 134 (1075)
+..+..+++++||+|.|.. .|.+.+.+.++|+..++|+- +...++|+. +-..++|++||||.|.|.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 3446778888999988853 46677778888888888763 222344433 345567888888888877
Q ss_pred CCCCccccccCCcceeecccccccCCCCCCCCCCCCCCEEEcCCCCCCCCCCccccCccccceEeeeccccccccCCCCc
Q 042958 135 GSIPYEIGRLSSLNYLALYSNYLEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHSLG 214 (1075)
Q Consensus 135 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 214 (1075)
...+..+..+ +..++.|++|.|.+|.+.-.-...++. .|..|. .|+ ..+
T Consensus 106 ~~g~~~l~~l--------------------l~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~ 154 (382)
T KOG1909|consen 106 PKGIRGLEEL--------------------LSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAA 154 (382)
T ss_pred ccchHHHHHH--------------------HHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccC
Confidence 5555443221 233444455555555443211111110 111111 000 011
Q ss_pred CCCCcCceeccccCCCCC----CcccccCCCCCCeEeccCCCCCC----ccCCCCcccccccccccccccCcCC----CC
Q 042958 215 NLTNLATLYLHNNSLFDS----IPSELGNLRSLSMLSLGYNKLSG----SIPHSLGNLTNLATLYLYENSLSGS----IP 282 (1075)
Q Consensus 215 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~----~~ 282 (1075)
.-++|+.+...+|++... +...|...+.|+.+.++.|.+.. .+...|..+++|+.|||.+|.++.. +.
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 122344444444444221 11223333444444444444431 1112344445555555555544421 12
Q ss_pred cccCCCccCcEEEccCCCCCCCcCCCC-----CccccccceecccccccCC----CCcccccccccccccccCCcc
Q 042958 283 SEFGNLRSLSMLNLGYNKLNGIIPHSL-----GNLTNLATLYIHNNSLSGS----IPSEIGNLRSLSNLGLSGNKL 349 (1075)
Q Consensus 283 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l 349 (1075)
..+..+++|+.|++++|.+......+| ...++|++|.|.+|.|+.. +...+...+.|+.|+|++|.+
T Consensus 235 kaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 334445555555555555554332222 1245566666666666521 122233456677777777766
No 463
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.14 E-value=8.1e-12 Score=126.62 Aligned_cols=132 Identities=27% Similarity=0.272 Sum_probs=82.8
Q ss_pred cCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccccccccccccccccceecccccccccCCCCCCccccccc
Q 042958 381 LGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLD 460 (1075)
Q Consensus 381 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 460 (1075)
+...+.|+++|||+|.|+ .+.++..-++.++.|++|+|.|+.+ +.++.+++|+.||||+|.++ .+..+-.+|-+++
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEe
Confidence 334456777777777775 5556666667777777777777643 23666777777777777776 3445555566677
Q ss_pred cccccCCccccCCCccccCcCCCCEEeCCCCcccCCC-cccccCCCccceeeccCCCCC
Q 042958 461 ALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGSI-PQSLGNLSNLVILYLYNNSLF 518 (1075)
Q Consensus 461 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~ 518 (1075)
.|.|++|.|.. -..++++-+|..||+++|+|.... -+.+++++-|+.+.|.+|++.
T Consensus 356 tL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 356 TLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred eeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 77777777652 234566666777777777765321 234566666666666666654
No 464
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.12 E-value=1.1e-11 Score=125.75 Aligned_cols=133 Identities=29% Similarity=0.331 Sum_probs=91.6
Q ss_pred ccCccccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCCCCccccccc
Q 042958 189 FGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLA 268 (1075)
Q Consensus 189 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 268 (1075)
+.....|++||||+|.|+ .+..+..-.+.++.|++++|.+..+ ..+..+++|+.||||+|.++ .+..+-..+.+++
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEe
Confidence 444566777788888777 5666666677778888888877643 23677777888888888777 4444555666777
Q ss_pred ccccccccCcCCCCcccCCCccCcEEEccCCCCCCCc-CCCCCccccccceecccccccC
Q 042958 269 TLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGII-PHSLGNLTNLATLYIHNNSLSG 327 (1075)
Q Consensus 269 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~ 327 (1075)
+|.|++|.+... +.++.+-+|..||+++|+|.... -..+++++.|+.+.|.+|.+.+
T Consensus 356 tL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 356 TLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred eeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 777877777632 45666777777788877776432 2456777777777777777763
No 465
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.11 E-value=1.9e-12 Score=135.03 Aligned_cols=170 Identities=25% Similarity=0.269 Sum_probs=92.2
Q ss_pred CCCEEeCCCCcccCCCcc----cccCCCccceeeccCCCCCCCCCccccCccccccccccccccccccCCcccccccCCC
Q 042958 482 SISNLALNNNKLSGSIPQ----SLGNLSNLVILYLYNNSLFDSIPSELGNLRSLSMLSFAYNKLSGSIPHSLGVLDLSSN 557 (1075)
Q Consensus 482 ~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~p~~l~~L~Ls~N 557 (1075)
+|+.|+||.|-|.-.-++ .+..++.|+.|+|.||.+.-..-..++ ..|..|. .|+.. .-|+.|++++..+|
T Consensus 93 ~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~kk~-~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 93 KLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VNKKA-ASKPKLRVFICGRN 167 (382)
T ss_pred ceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HHhcc-CCCcceEEEEeecc
Confidence 444444444444322222 234567777777777766321111221 1222222 33322 23567888888888
Q ss_pred ccccccchh----hhhhhHhHHHhhccccccc----ccccccCcccccceeecCCCcccC----cccccccccccceEEE
Q 042958 558 HIVGEIPTE----LGKLNFLIKLILAQNQLSG----QLSPKLGSLAQLEHLDLSSNRLSN----SIPKSFGNLVKLHYLN 625 (1075)
Q Consensus 558 ~l~~~~p~~----~~~~~~l~~L~l~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ 625 (1075)
++....... +...+.|..+.+.+|.+.. .+...|..+++|+.|||.+|.|+. .+...++.+++|+.|+
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~ 247 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELN 247 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeec
Confidence 886543333 3334556666777776652 123346677777777777777763 3345566667777777
Q ss_pred ccccccccccchhcc-----cccccceeeecccccc
Q 042958 626 LSNNQFSRGIPIKLE-----ELIHLSELDLSHNFLR 656 (1075)
Q Consensus 626 Ls~N~l~~~~p~~~~-----~l~~L~~L~ls~N~l~ 656 (1075)
++++.++......+. ..++|++|.|.+|.++
T Consensus 248 l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 248 LGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred ccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 777776654433331 2445555555555554
No 466
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.09 E-value=1.6e-11 Score=142.31 Aligned_cols=151 Identities=33% Similarity=0.422 Sum_probs=83.9
Q ss_pred CccccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCCCCccccccccc
Q 042958 191 NLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATL 270 (1075)
Q Consensus 191 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 270 (1075)
.+..++.+++..|.+. .+-..+..+++|+.|++.+|+|... ...+..+++|++|++++|.|+.. ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 3445555556666665 2333455566666666666666532 22255666666666666666643 234455556666
Q ss_pred ccccccCcCCCCcccCCCccCcEEEccCCCCCCCcC-CCCCccccccceecccccccCCCCcccccccccccccccCCcc
Q 042958 271 YLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIP-HSLGNLTNLATLYIHNNSLSGSIPSEIGNLRSLSNLGLSGNKL 349 (1075)
Q Consensus 271 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 349 (1075)
++++|.++.+ ..+..+..|+.+++++|++..+.+ . ...+.+++.+++.+|.+.. ...+..+..+..+++..|.+
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccc
Confidence 6666666632 344446666666666666664433 1 3555666666666666652 22333344444455555555
Q ss_pred c
Q 042958 350 S 350 (1075)
Q Consensus 350 ~ 350 (1075)
+
T Consensus 221 ~ 221 (414)
T KOG0531|consen 221 S 221 (414)
T ss_pred e
Confidence 4
No 467
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.09 E-value=2e-11 Score=141.41 Aligned_cols=219 Identities=33% Similarity=0.469 Sum_probs=132.7
Q ss_pred cccCCCceeecccCcccccCCCCCCCCCCCcEEEccCcccCCCCCccccccCCcceeecccccccCCCCCCCCCCCCCCE
Q 042958 94 GNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRLSSLNYLALYSNYLEDLIPPSLGNLSNLDT 173 (1075)
Q Consensus 94 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 173 (1075)
..+..++.+.+..|.+. .+-..+..+++|+.|++.+|+|.. +...+..+++|++|++++|.|+.+.+ +..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc--hhhccchhh
Confidence 45667777777777776 333457777888888888888773 33335667777777777777777643 666677777
Q ss_pred EEcCCCCCCCCCCccccCccccceEeeeccccccccCCC-CcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCC
Q 042958 174 LHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIPHS-LGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNK 252 (1075)
Q Consensus 174 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 252 (1075)
|++++|.|+.. ..+..++.|+.+++++|++...-+ . ...+.+++.+++.+|.+.. ...+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhc--ccchHHHHHHHHhhccccc
Confidence 77777777643 235557777777777777763332 1 4566677777777777643 2334455555555677777
Q ss_pred CCCccCCCCccccc--ccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceeccccccc
Q 042958 253 LSGSIPHSLGNLTN--LATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLS 326 (1075)
Q Consensus 253 l~~~~~~~~~~l~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 326 (1075)
++..- .+..+.. |+.+++++|.+.. .+..+..+..+..|++.+|++... ..+.....+..+....|.+.
T Consensus 220 i~~~~--~l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 220 ISKLE--GLNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred ceecc--CcccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 66321 1222222 6666777666662 224455555666666666665533 22333444555555555543
No 468
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=1.3e-10 Score=131.33 Aligned_cols=240 Identities=25% Similarity=0.279 Sum_probs=162.9
Q ss_pred CCCCCceecc--cCceEEEEEEE---CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeeccccc
Q 042958 816 DFDDEHCIGK--GGQGSVYKAEL---ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRHS 889 (1075)
Q Consensus 816 ~~~~~~~lG~--G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 889 (1075)
.|.....+|. |.+|.||.+.. .++..+|+|+-+.+...... ...=.+|+...+.+ .|++.++.+..+...+..
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~-~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLD-SKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccc-cccccchhhcccccCccccccccCcccccCCcc
Confidence 4556678999 99999999955 47899999986665443222 22334666666666 589999977666554443
Q ss_pred hhhee-cCc-------cccCCCCHHHHHHHHHHHHH----HHHHHHhCCCCCeEEecCCCCCeeeCCC-CCceEeccccc
Q 042958 890 LAMIL-SNN-------AAAKDLGWTRRMNVIKGISD----ALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIA 956 (1075)
Q Consensus 890 l~~~~-~~~-------~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla 956 (1075)
+.... ... .....++....+.+..+..+ |+.++|.. .++|-|+||.||+...+ ...+++|||+.
T Consensus 194 fiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 194 FIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred eeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCccee
Confidence 32221 110 11222444555666667777 99999999 99999999999999999 88999999999
Q ss_pred cccCCCCCc-----eeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccC
Q 042958 957 KFLKPDSSN-----WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLD 1031 (1075)
Q Consensus 957 ~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1075)
..+.+..-. .....|...|++||...+ .++.++|+|++|.+..+..++..+...--...+... ..
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~---------r~ 340 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL---------RQ 340 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc---------cc
Confidence 888765421 122357788999998765 488899999999999999998766431100011110 00
Q ss_pred CCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1032 PRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1032 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
... +.++......++..++..+++.+|..|++++++..
T Consensus 341 ~~i--p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 341 GYI--PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ccC--chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 011 11111222334666899999999999999998765
No 469
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=2e-10 Score=113.49 Aligned_cols=124 Identities=31% Similarity=0.316 Sum_probs=50.2
Q ss_pred hHhHHHhhcccccccccccccC-cccccceeecCCCcccCcccccccccccceEEEccccccccccchhcccccccceee
Q 042958 571 NFLIKLILAQNQLSGQLSPKLG-SLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELD 649 (1075)
Q Consensus 571 ~~l~~L~l~~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 649 (1075)
..+++|+|.+|+|+.. +.++ .+.+|+.||||+|.|+. ++ .+..+++|++|++++|+|+...+.....+++|++|+
T Consensus 19 ~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 19 VKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 3567777777777743 3455 57889999999999973 43 477788999999999999864332224688899999
Q ss_pred eccccccCchh-hhhccccccceeecCCCccccCCh---hhhcccccccEEee
Q 042958 650 LSHNFLREAIP-SQICIMQSLENLNLSHNSLVGLIP---SCFEKMHGLLRIDI 698 (1075)
Q Consensus 650 ls~N~l~~~~~-~~~~~~~~L~~L~ls~N~l~~~~p---~~~~~~~~l~~l~~ 698 (1075)
|++|+|...-. ..+..+++|+.|++.+|++....- .-+..+|+|+.||-
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 99999976332 456678889999999999874421 23677888888874
No 470
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=3.1e-11 Score=129.25 Aligned_cols=158 Identities=26% Similarity=0.185 Sum_probs=66.3
Q ss_pred CCcceeecccccccCCCC-CCCCCCCCCCEEEcCCCCCCCC--CCccccCccccceEeeeccccccccCCCC-cCCCCcC
Q 042958 145 SSLNYLALYSNYLEDLIP-PSLGNLSNLDTLHLYDNSLSDS--IPSEFGNLRSLSMLSLGYNKFSGSIPHSL-GNLTNLA 220 (1075)
Q Consensus 145 ~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l-~~l~~L~ 220 (1075)
++|+...|+++.+..... .....+++++.|||++|-+... +......+++|+.|+|+.|++.....+.. ..+++|+
T Consensus 121 kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 121 KKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred HhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 334444444444333221 2344555566666666555432 12223445556666666665542111111 1234455
Q ss_pred ceeccccCCCCC-CcccccCCCCCCeEeccCCCCCCccCCCCcccccccccccccccCcCCC-CcccCCCccCcEEEccC
Q 042958 221 TLYLHNNSLFDS-IPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLYLYENSLSGSI-PSEFGNLRSLSMLNLGY 298 (1075)
Q Consensus 221 ~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~Ls~ 298 (1075)
.|.|+.|.++.. +......+++|+.|+|.+|.....-......+..|++|+|++|++-... -...+.++.|+.|+++.
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~ 280 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSS 280 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccc
Confidence 555555555421 1112233455555555555322222222333344555555555444211 02333444444444444
Q ss_pred CCCC
Q 042958 299 NKLN 302 (1075)
Q Consensus 299 N~l~ 302 (1075)
+.+.
T Consensus 281 tgi~ 284 (505)
T KOG3207|consen 281 TGIA 284 (505)
T ss_pred cCcc
Confidence 4444
No 471
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.02 E-value=2.6e-09 Score=123.55 Aligned_cols=137 Identities=19% Similarity=0.221 Sum_probs=85.1
Q ss_pred ceecccCceEEEEEEECCCCEEEEEEccCCCCCch---------------------------hHH----------HHHHH
Q 042958 821 HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEM---------------------------TFQ----------QEFLN 863 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~---------------------------~~~----------~~~~~ 863 (1075)
+.||.|++|.||+|++++|+.||||+.+....... ... -+|..
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 67999999999999999999999999864321100 000 02445
Q ss_pred HHHHHhcCC----cCceeeEEEEeec--cccchhheecCccccCCCCHH-----HHHHHHHHHHH-HHHHHHhCCCCCeE
Q 042958 864 EVKALTEIR----HRNIVKFYGFCSH--VRHSLAMILSNNAAAKDLGWT-----RRMNVIKGISD-ALSYMHNDCFPPIV 931 (1075)
Q Consensus 864 E~~~l~~l~----h~niv~l~~~~~~--~~~~l~~~~~~~~~~~~l~~~-----~~~~i~~~i~~-~L~~LH~~~~~~iv 931 (1075)
|++.+.+++ |.+-+.+-.++.+ ....+.+.+.....-..+... .+.+++.+++. .+..+|.. |++
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~---g~~ 279 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD---GFF 279 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC---Cce
Confidence 555555552 2222222222211 122233322222111111000 23467777776 47888988 999
Q ss_pred EecCCCCCeeeCCCCCceEeccccccccC
Q 042958 932 HRDISSKNVLLDFDNEAHVSDFGIAKFLK 960 (1075)
Q Consensus 932 H~Dlk~~Nill~~~~~~kl~DfGla~~~~ 960 (1075)
|+|++|.||+++.+++++++|||++..+.
T Consensus 280 H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 280 HADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred eCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999997654
No 472
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=4.5e-11 Score=128.06 Aligned_cols=210 Identities=24% Similarity=0.227 Sum_probs=111.0
Q ss_pred CCCCCCCEEEcCCCCCCCCCC-ccccCccccceEeeecccccccc--CCCCcCCCCcCceeccccCCCCCCccc-ccCCC
Q 042958 166 GNLSNLDTLHLYDNSLSDSIP-SEFGNLRSLSMLSLGYNKFSGSI--PHSLGNLTNLATLYLHNNSLFDSIPSE-LGNLR 241 (1075)
Q Consensus 166 ~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~-~~~l~ 241 (1075)
+++.+|+...|.++.+..... .....|++++.||||.|-+.... -.....+++|+.|+|+.|++....... -..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 356778888888887763322 34566778888888888776322 233455677777777777765322211 12455
Q ss_pred CCCeEeccCCCCCC-ccCCCCcccccccccccccccCcCCCCcccCCCccCcEEEccCCCCCCCc-CCCCCcccccccee
Q 042958 242 SLSMLSLGYNKLSG-SIPHSLGNLTNLATLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGII-PHSLGNLTNLATLY 319 (1075)
Q Consensus 242 ~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~ 319 (1075)
+|+.|.|+.|.++- .+...+..+++|+.|+|..|...........-+..|+.|||++|.+.... -...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 66666666666652 11222334455666666666422222223333455555666655554221 02334455555555
Q ss_pred cccccccCCCCcccccccccccccccCCcccccCCCc-----CCCCCCcceeeccccccCCCC-ccccCCCcccceeeec
Q 042958 320 IHNNSLSGSIPSEIGNLRSLSNLGLSGNKLSGSIPPS-----LGYLSNLATLYLYSNSLFDSI-PSELGNLRSLSMLSLG 393 (1075)
Q Consensus 320 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-----l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls 393 (1075)
++.+.|..+. .|+. ....++|++|++..|++.+.. -..+..+++|+.|...
T Consensus 278 ls~tgi~si~-----------------------~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~ 334 (505)
T KOG3207|consen 278 LSSTGIASIA-----------------------EPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRIT 334 (505)
T ss_pred ccccCcchhc-----------------------CCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcc
Confidence 5555554221 1111 233455666666666663221 1234445666666766
Q ss_pred ccccc
Q 042958 394 YNKLS 398 (1075)
Q Consensus 394 ~N~l~ 398 (1075)
.|.++
T Consensus 335 ~n~ln 339 (505)
T KOG3207|consen 335 LNYLN 339 (505)
T ss_pred ccccc
Confidence 77765
No 473
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.98 E-value=1.8e-10 Score=113.79 Aligned_cols=66 Identities=33% Similarity=0.338 Sum_probs=17.8
Q ss_pred CCCCCCCCEEEcCCCCCCCCCCccccCccccceEeeeccccccccC-CCCcCCCCcCceeccccCCC
Q 042958 165 LGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYNKFSGSIP-HSLGNLTNLATLYLHNNSLF 230 (1075)
Q Consensus 165 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~ 230 (1075)
+..+++|++|++++|+|+.+.+.....+++|++|+|++|+|..... ..+..+++|+.|+|.+|.++
T Consensus 60 l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 60 LPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp ----TT--EEE--SS---S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 4445555555555555554322111245555555555555542111 22334444555555555443
No 474
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.95 E-value=7.5e-10 Score=136.46 Aligned_cols=131 Identities=29% Similarity=0.376 Sum_probs=82.9
Q ss_pred CCCCCccEEEccCCCccCCCCccccccCCCceeecccCc--ccccCCCCCCCCCCCcEEEccCcccCCCCCccccccCCc
Q 042958 70 SSFPHLAYLDLWHNQLYGNIPPQIGNISRLKYLDLSSNL--FFGTIPPEIGHLSYLKTLQLFENQLNGSIPYEIGRLSSL 147 (1075)
Q Consensus 70 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~--l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 147 (1075)
.+....++..+-+|.+. .++....+ ++|+.|-+..|. +....+..|..++.|++|||++|.=.+.+|..++.|-+|
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred cchhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 34456677777777765 44433332 367788887775 442333446778888888888876666777777777777
Q ss_pred ceeecccccccCCCCCCCCCCCCCCEEEcCCCCCCCCCCccccCccccceEeeecc
Q 042958 148 NYLALYSNYLEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEFGNLRSLSMLSLGYN 203 (1075)
Q Consensus 148 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 203 (1075)
++|++++..+.. .|..+.+|+.|.+|++..+.-...+|.....+++|++|.+..-
T Consensus 598 ryL~L~~t~I~~-LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 598 RYLDLSDTGISH-LPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred hcccccCCCccc-cchHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 777777777663 3555666666666666666544444555555666666655543
No 475
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.91 E-value=1.2e-08 Score=116.50 Aligned_cols=161 Identities=19% Similarity=0.240 Sum_probs=113.9
Q ss_pred EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeeccccchhheecCccccCCC-------CHHH
Q 042958 835 ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRHSLAMILSNNAAAKDL-------GWTR 907 (1075)
Q Consensus 835 ~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l~~~~~~~~~~~~l-------~~~~ 907 (1075)
+..++.+|.|...+.... ...+...+.++.++.++||||+++++.+...+..+. .-+ ...++ +...
T Consensus 33 ~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~yl-vTE---rV~Pl~~~lk~l~~~~ 105 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYL-VTE---RVRPLETVLKELGKEE 105 (690)
T ss_pred eeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEE-Eee---ccccHHHHHHHhHHHH
Confidence 556789999988875432 334667788999999999999999998776553211 111 11112 2223
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCceeccccccCccCccccccCCCC
Q 042958 908 RMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT 987 (1075)
Q Consensus 908 ~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 987 (1075)
..-.+.||+.||.|||+.| +++|++|.-..|++++.|+.||++|-++..............--..|..|+.+....
T Consensus 106 v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 106 VCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--
Confidence 3446789999999999776 899999999999999999999999988865443222111222223566777654333
Q ss_pred cccchHhHHHHHHHHHhCC
Q 042958 988 EKCDVYSFGVLALEVIKGK 1006 (1075)
Q Consensus 988 ~~~Dv~s~G~vl~elltg~ 1006 (1075)
-..|.|-||++++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 3469999999999999993
No 476
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.89 E-value=9.5e-10 Score=135.61 Aligned_cols=299 Identities=29% Similarity=0.285 Sum_probs=162.3
Q ss_pred CccccceEeeeccccccccCCCCcCCCCcCceeccccC--CCCCCcccccCCCCCCeEeccCCCCCCccCCCCccccccc
Q 042958 191 NLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNS--LFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLA 268 (1075)
Q Consensus 191 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~--l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 268 (1075)
+....+...+-+|.+. .++.... +++|++|-+..|. +....++.|..++.|++|||++|.--+.+|..++.+-+|+
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred chhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 3356777778788776 4444333 3478888888886 4444445577788888888888877778888888888888
Q ss_pred ccccccccCcCCCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceeccccccc--CCCCcccccccccccccccC
Q 042958 269 TLYLYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLS--GSIPSEIGNLRSLSNLGLSG 346 (1075)
Q Consensus 269 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~l~~ 346 (1075)
+|++++..++ .+|..++++..|.+|++..+.-...+|.....+++|++|.+-.-... ...-..+..+.+|+.+....
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~ 677 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITI 677 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeec
Confidence 8888888888 67888888888888888887765556667777888888887665422 11222233344444444322
Q ss_pred CcccccCCCcCCCCCCcc----eeeccccccCCCCccccCCCcccceeeeccccccccCChhhccCCCCCeEEeeccccc
Q 042958 347 NKLSGSIPPSLGYLSNLA----TLYLYSNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYDNSLS 422 (1075)
Q Consensus 347 N~l~~~~~~~l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 422 (1075)
... .+-..+..+..|. .+.+..+.. ...+..+..+.+|+.|.+.++.+.............+.
T Consensus 678 ~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~-~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~---------- 744 (889)
T KOG4658|consen 678 SSV--LLLEDLLGMTRLRSLLQSLSIEGCSK-RTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLL---------- 744 (889)
T ss_pred chh--HhHhhhhhhHHHHHHhHhhhhccccc-ceeecccccccCcceEEEEcCCCchhhcccccccchhh----------
Confidence 221 0111112222222 122111111 22333344444445555544444322221111110000
Q ss_pred cccccccccccccceecccccccccCCCCCCccccccccccccCCccccCCCccccCcCCCCEEeCCCCcccCC-Ccccc
Q 042958 423 GSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLSGS-IPQSL 501 (1075)
Q Consensus 423 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~ 501 (1075)
.++++..+.+.++..- ..+.+..-.++|+.|++.++.....+.+....+..++.+-+..+.+.+. .-...
T Consensus 745 --------~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l 815 (889)
T KOG4658|consen 745 --------CFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSL 815 (889)
T ss_pred --------hHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecC
Confidence 0122222222222111 1122222336677777776666555555555555565555666666554 34445
Q ss_pred cCCCccceeeccC
Q 042958 502 GNLSNLVILYLYN 514 (1075)
Q Consensus 502 ~~l~~L~~L~L~~ 514 (1075)
+.++++..+.++.
T Consensus 816 ~~l~~i~~~~l~~ 828 (889)
T KOG4658|consen 816 GGLPQLYWLPLSF 828 (889)
T ss_pred CCCceeEecccCc
Confidence 5555555555444
No 477
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.87 E-value=5.9e-09 Score=105.30 Aligned_cols=128 Identities=20% Similarity=0.149 Sum_probs=87.4
Q ss_pred ceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCce-eeEEEEeeccccchhheecCccc
Q 042958 821 HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNI-VKFYGFCSHVRHSLAMILSNNAA 899 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~l~~~~~~~~~ 899 (1075)
+.++.|.++.||+++.. ++.|++|....... ....+..|+.+++.+.+.++ .+++++.... ..+. ++...
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~-~~lv--~e~i~- 74 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDPET-GVLI--TEFIE- 74 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeCCC-CeEE--EEecC-
Confidence 56899999999999876 78899999754321 12346788999988865554 4555554322 2222 22211
Q ss_pred cCCCCH--HHHHHHHHHHHHHHHHHHhCC--CCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 900 AKDLGW--TRRMNVIKGISDALSYMHNDC--FPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 900 ~~~l~~--~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
+..+.. .....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTEDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 122221 122456789999999999983 12369999999999999 67899999998764
No 478
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.86 E-value=2.9e-09 Score=110.12 Aligned_cols=188 Identities=21% Similarity=0.289 Sum_probs=118.9
Q ss_pred HhcCCcCceeeEEEEeecccc----chhheecCcc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 042958 868 LTEIRHRNIVKFYGFCSHVRH----SLAMILSNNA-------------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPI 930 (1075)
Q Consensus 868 l~~l~h~niv~l~~~~~~~~~----~l~~~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 930 (1075)
+-++-|.|+|++..|+.+... ...++.++.. ....+....-.+|..||..||.|||+. .|+|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 344568999999998865433 1222222211 122344445568999999999999986 6799
Q ss_pred EEecCCCCCeeeCCCCCceEeccccccccCCCC-----CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhC
Q 042958 931 VHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDS-----SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG 1005 (1075)
Q Consensus 931 vH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg 1005 (1075)
+|+++..+-|++..+|-+|+.--.-. ...+.. .......+-++|.|||+-.....+.++|||+||....||.-+
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred ccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 99999999999999988887421111 111100 011123456899999998877788899999999999999887
Q ss_pred CCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHh
Q 042958 1006 KHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMPKVSQ 1071 (1075)
Q Consensus 1006 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1071 (1075)
..--... ......+......+...-. . .=+.++.+|++..|..||+|.+++.
T Consensus 279 Eiq~tns----eS~~~~ee~ia~~i~~len-----~-----lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 279 EIQSTNS----ESKVEVEENIANVIIGLEN-----G-----LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred eeccCCC----cceeehhhhhhhheeeccC-----c-----cccCcCcccccCCCCCCcchhhhhc
Confidence 6441100 0111111111111111000 0 1235788999999999999998763
No 479
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.80 E-value=2e-07 Score=100.11 Aligned_cols=244 Identities=19% Similarity=0.290 Sum_probs=152.3
Q ss_pred CCCceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceee----------------EE
Q 042958 818 DDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVK----------------FY 880 (1075)
Q Consensus 818 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~----------------l~ 880 (1075)
...+.+|+|+.+.+|-...- +.. +-|++..+...... + -+..|... .||-+-. .+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa~~a---q---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPAAQA---Q---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCCccccCCccceeeecchh-hch-hheeecCCCchHHH---H---HHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 45678999999999976222 222 44777765443221 1 12222332 3443222 23
Q ss_pred EEeec---cccchhheecCc---cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccc
Q 042958 881 GFCSH---VRHSLAMILSNN---AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFG 954 (1075)
Q Consensus 881 ~~~~~---~~~~l~~~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfG 954 (1075)
|+... ....+.+++... .......|.-.++++..+|.|.+-||.. |.+-+|+.++|+|+.+++.+.+.|-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccc
Confidence 33211 111222333222 1223468999999999999999999999 89999999999999999999999855
Q ss_pred cccccCCCCCceeccccccCccCccccc-----cCCCCcccchHhHHHHHHHHHhC-CCCCCccCccccchhhhhhhh--
Q 042958 955 IAKFLKPDSSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKG-KHPRDFISSMSSSSLNLNIAL-- 1026 (1075)
Q Consensus 955 la~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg-~~p~~~~~~~~~~~~~~~~~~-- 1026 (1075)
.-... .++..+...+|...|.+||.-. +...+...|-|.+|+++++++.| ++||.++........-.+..+
T Consensus 163 sfqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 163 SFQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred ceeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 43322 3455667788999999999643 44567789999999999999975 999986543321111111010
Q ss_pred ------hhccCCCCCCCCcC-cHHHHHHHHHHHHHccCC--CCCCCCCHHHHHhhh
Q 042958 1027 ------DEMLDPRLPTPSCI-VQDKLISIVEVAISCLDE--NPESRPTMPKVSQLL 1073 (1075)
Q Consensus 1027 ------~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~--dP~~RPs~~evl~~L 1073 (1075)
.+...+..+.|... ..--++.+..+..+|+.. .+.-|||++-.+..|
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl 297 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAAL 297 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Confidence 11111222222222 222345688888899864 367899998877655
No 480
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.75 E-value=6.5e-09 Score=84.38 Aligned_cols=61 Identities=46% Similarity=0.589 Sum_probs=39.1
Q ss_pred cccceeecCCCcccCcccccccccccceEEEccccccccccchhcccccccceeeeccccc
Q 042958 595 AQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSNNQFSRGIPIKLEELIHLSELDLSHNFL 655 (1075)
Q Consensus 595 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 655 (1075)
++|++|++++|+|+...+..|..+++|++|++++|+++...|..|..+++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566666666666644445666666666666666666666666666666666666666654
No 481
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=6.7e-09 Score=84.30 Aligned_cols=58 Identities=41% Similarity=0.583 Sum_probs=25.4
Q ss_pred CCeEEeeccccccccccccccccccceecccccccccCCCCCCccccccccccccCCc
Q 042958 411 LATLDLYDNSLSGSIPSEFGNLRSLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNS 468 (1075)
Q Consensus 411 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 468 (1075)
|++|++++|+|+.+.++.|.++++|++|++++|+++...|.+|.++++|++|++++|+
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 4444444444443333444444444444444444443334444444444444444443
No 482
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.72 E-value=1.1e-08 Score=115.90 Aligned_cols=239 Identities=20% Similarity=0.179 Sum_probs=157.6
Q ss_pred HHhcCCCCCceecccCceEEEEEEE--CCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcC-CcCceeeEEEEeecccc
Q 042958 812 RATNDFDDEHCIGKGGQGSVYKAEL--ASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEI-RHRNIVKFYGFCSHVRH 888 (1075)
Q Consensus 812 ~~~~~~~~~~~lG~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 888 (1075)
....+|..+..||.|.|+.||+... .++..|++|..........+. ..-..|+.+...+ .|.++++++..+...+.
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-IFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-hcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 3456888899999999999999844 467889999887665443332 2234566665555 57788876654443333
Q ss_pred ch-hheecCc-------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCC-CCceEecccccccc
Q 042958 889 SL-AMILSNN-------AAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFD-NEAHVSDFGIAKFL 959 (1075)
Q Consensus 889 ~l-~~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~DfGla~~~ 959 (1075)
.+ ...+... .....++...++++..|++.|+.++|+. .++|+|+||+||++..+ +..++.|||.+..+
T Consensus 341 ~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccccccc
Confidence 22 1111111 1122356667788999999999999998 99999999999999886 78899999998642
Q ss_pred CCCCCceeccccccCc-cCccccccCCCCcccchHhHHHHHHHHHhCCCCCC-ccCccccchhhhhhhhhhccCCCCCCC
Q 042958 960 KPDSSNWTELAGTYGY-VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD-FISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 960 ~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
.-. .......+..| .+|+......+..+.|+||||.-+.|.++|..--. +.. ...+.....+..
T Consensus 418 ~~~--~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~------------~~~i~~~~~p~~ 483 (524)
T KOG0601|consen 418 AFS--SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ------------SLTIRSGDTPNL 483 (524)
T ss_pred cee--cccccccccccccchhhccccccccccccccccccccccccCcccCccccc------------ceeeecccccCC
Confidence 211 11111223333 35666667788899999999999999999875421 100 111111222221
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
. ....++..+.+.+..+|+..||.+.+....
T Consensus 484 ~----~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 484 P----GLKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred C----chHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 1 111457778888999999999999887654
No 483
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.71 E-value=2.7e-07 Score=107.80 Aligned_cols=143 Identities=17% Similarity=0.240 Sum_probs=80.7
Q ss_pred hcCCCCCceecccCceEEEEEEECC-CCEEEEEEccCCCCCc---------------------------h----hHHHH-
Q 042958 814 TNDFDDEHCIGKGGQGSVYKAELAS-GEIVAVKKFHSPLPGE---------------------------M----TFQQE- 860 (1075)
Q Consensus 814 ~~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~---------------------------~----~~~~~- 860 (1075)
...|+. +.+|.|++|.||+|++++ |+.||||+.+...... . +..+.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 789999999999999887 9999999987432100 0 11122
Q ss_pred -----HHHHHHHHhcCC----cCceeeEEEEeec--cccchhheecCccccCCCCHH-----HHHHHHHHHHHH-HHHHH
Q 042958 861 -----FLNEVKALTEIR----HRNIVKFYGFCSH--VRHSLAMILSNNAAAKDLGWT-----RRMNVIKGISDA-LSYMH 923 (1075)
Q Consensus 861 -----~~~E~~~l~~l~----h~niv~l~~~~~~--~~~~l~~~~~~~~~~~~l~~~-----~~~~i~~~i~~~-L~~LH 923 (1075)
|.+|+..+.+++ +...+.+-.++.+ ....+.|.+.....-.++... .+..++...+++ +..+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 344444444442 3322322222211 122222222221111111000 012233333322 33445
Q ss_pred hCCCCCeEEecCCCCCeeeCCCC----CceEeccccccccC
Q 042958 924 NDCFPPIVHRDISSKNVLLDFDN----EAHVSDFGIAKFLK 960 (1075)
Q Consensus 924 ~~~~~~ivH~Dlk~~Nill~~~~----~~kl~DfGla~~~~ 960 (1075)
.. |++|+|+||.||+++.++ ++++.|||++..+.
T Consensus 278 ~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 56 999999999999999988 99999999998664
No 484
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.66 E-value=2e-08 Score=74.38 Aligned_cols=41 Identities=39% Similarity=0.947 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHhccCCCCCCCcCCCCcCCCCCCCCCccceEEeC
Q 042958 2 EEAHALLRWKTSLQNHNNGSLLSSWTLNNVTKTSPCAWVGIHCN 45 (1075)
Q Consensus 2 ~~~~all~~k~~~~~~~~~~~l~sw~~~~~~~~~~c~w~gv~C~ 45 (1075)
+|++||++||+++.+++. +.+.+|+... .+.+|.|.||+|+
T Consensus 3 ~d~~aLl~~k~~l~~~~~-~~l~~W~~~~--~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 3 QDRQALLAFKKSLNNDPS-GVLSSWNPSS--DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHCTT-SC--CCCTT--TT----S-CCCSTTEEE-
T ss_pred HHHHHHHHHHHhcccccC-cccccCCCcC--CCCCeeeccEEeC
Confidence 589999999999987654 6899998321 1345999999996
No 485
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.65 E-value=2.1e-07 Score=94.04 Aligned_cols=135 Identities=19% Similarity=0.230 Sum_probs=91.7
Q ss_pred CceecccCceEEEEEEECC-------CCEEEEEEccCCCCC----------c---------hhHHHHHH----HHHHHHh
Q 042958 820 EHCIGKGGQGSVYKAELAS-------GEIVAVKKFHSPLPG----------E---------MTFQQEFL----NEVKALT 869 (1075)
Q Consensus 820 ~~~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~~----------~---------~~~~~~~~----~E~~~l~ 869 (1075)
...||.|--+.||.|...+ +..+|||+.+..... + ....+.+. +|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999995442 479999987532100 0 11123333 8999999
Q ss_pred cCCc--CceeeEEEEeeccccchhheecCcc-----c--cCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEEecCCCCC
Q 042958 870 EIRH--RNIVKFYGFCSHVRHSLAMILSNNA-----A--AKDLGWTRRMNVIKGISDALSYM-HNDCFPPIVHRDISSKN 939 (1075)
Q Consensus 870 ~l~h--~niv~l~~~~~~~~~~l~~~~~~~~-----~--~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk~~N 939 (1075)
++.. -++.+.+++ .++.+.|.+-... . ...++..+...+..+++.++.++ |+. ++||||++++|
T Consensus 82 rl~~~Gv~vP~pi~~---~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL---KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe---cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence 9843 456666654 2344443332211 0 11233445567889999999999 788 99999999999
Q ss_pred eeeCCCCCceEeccccccccCC
Q 042958 940 VLLDFDNEAHVSDFGIAKFLKP 961 (1075)
Q Consensus 940 ill~~~~~~kl~DfGla~~~~~ 961 (1075)
|+++ ++.++++|||.|.....
T Consensus 156 IL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 156 MLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred EEEE-CCcEEEEECCCceeCCC
Confidence 9997 57899999999886553
No 486
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.60 E-value=2.5e-09 Score=121.01 Aligned_cols=126 Identities=35% Similarity=0.362 Sum_probs=101.2
Q ss_pred ccccccCCCccccccchhhhhhhHhHHHhhcccccccccccccCcccccceeecCCCcccCcccccccccccceEEEccc
Q 042958 549 LGVLDLSSNHIVGEIPTELGKLNFLIKLILAQNQLSGQLSPKLGSLAQLEHLDLSSNRLSNSIPKSFGNLVKLHYLNLSN 628 (1075)
Q Consensus 549 l~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 628 (1075)
|...+.++|.++ ....++.-++.++.|+|++|+++..- .+..+++|.+||||+|++. .+|..=..-..|..|++++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrn 241 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRN 241 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhhheeeeecc
Confidence 556777788777 66778888899999999999999553 7889999999999999998 5664332233499999999
Q ss_pred cccccccchhcccccccceeeeccccccCchh-hhhccccccceeecCCCccc
Q 042958 629 NQFSRGIPIKLEELIHLSELDLSHNFLREAIP-SQICIMQSLENLNLSHNSLV 680 (1075)
Q Consensus 629 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~~~~L~~L~ls~N~l~ 680 (1075)
|.++.. ..+++|.+|+-||||+|-|.+.-. ..++.+.+|+.|+|.+|++-
T Consensus 242 N~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 242 NALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 999752 357889999999999999987332 34566778999999999994
No 487
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.59 E-value=4.9e-10 Score=126.61 Aligned_cols=127 Identities=32% Similarity=0.442 Sum_probs=93.7
Q ss_pred cccceEeeeccccccccCCCCcCCCCcCceeccccCCCCCCcccccCCCCCCeEeccCCCCCCccCC-CCcccccccccc
Q 042958 193 RSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHNNSLFDSIPSELGNLRSLSMLSLGYNKLSGSIPH-SLGNLTNLATLY 271 (1075)
Q Consensus 193 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~ 271 (1075)
-.|...+.++|.+. ....++.-++.|+.|+|++|+++.. ..+..+++|++|||++|.+. .+|. ....+ +|..|.
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeee
Confidence 35777888888887 6777888888889999999988754 37788888999999999888 4443 23334 388888
Q ss_pred cccccCcCCCCcccCCCccCcEEEccCCCCCCCcC-CCCCccccccceeccccccc
Q 042958 272 LYENSLSGSIPSEFGNLRSLSMLNLGYNKLNGIIP-HSLGNLTNLATLYIHNNSLS 326 (1075)
Q Consensus 272 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 326 (1075)
+++|.++.. ..+.++.+|+.||+++|-|.+.-. ..+..|..|+.|+|.+|.+-
T Consensus 239 lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 239 LRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 888888742 356778888888888888774321 23455677888888888775
No 488
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.57 E-value=2.3e-08 Score=118.82 Aligned_cols=243 Identities=19% Similarity=0.225 Sum_probs=152.6
Q ss_pred HhcCCCCCceecccCceEEEEEEEC-CCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeec-cccch
Q 042958 813 ATNDFDDEHCIGKGGQGSVYKAELA-SGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSH-VRHSL 890 (1075)
Q Consensus 813 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 890 (1075)
..+.+.+.+-+..|+++.++-+.-. .|...++|.......-.....+....+-.+.-..++|-++...--+.. ....+
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4566777788899999999988433 455555554432211111112223333333333455666654433111 11112
Q ss_pred hheecCcc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCC--
Q 042958 891 AMILSNNA-------AAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKP-- 961 (1075)
Q Consensus 891 ~~~~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~-- 961 (1075)
.+.+.... .....+..-.+.....+..+.+|||.. .+.|||++|.|.+...++..+++|||......-
T Consensus 882 ~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccccc
Confidence 22211110 011122233345566778899999998 799999999999999999999999984322110
Q ss_pred -------------------CC----------CceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcc
Q 042958 962 -------------------DS----------SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFI 1012 (1075)
Q Consensus 962 -------------------~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~ 1012 (1075)
.. .......||+.|.|||...+.....++|+|++|++++|.++|..||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 00 0012245899999999999999999999999999999999999999743
Q ss_pred CccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCCCCCHH
Q 042958 1013 SSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPESRPTMP 1067 (1075)
Q Consensus 1013 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 1067 (1075)
.. +...+.+.....+.+. ..........+++...+..+|.+|-.|.
T Consensus 1039 tp--------q~~f~ni~~~~~~~p~-g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1039 TP--------QQIFENILNRDIPWPE-GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred ch--------hhhhhccccCCCCCCC-CccccChhhhhhhhhhhccCchhccCcc
Confidence 32 2333444444444432 2334455678888888999999998775
No 489
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.53 E-value=2.8e-08 Score=113.87 Aligned_cols=150 Identities=19% Similarity=0.322 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccccCCCCCc----ee-----ccccccCccCcccccc
Q 042958 913 KGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKFLKPDSSN----WT-----ELAGTYGYVAPELAYT 983 (1075)
Q Consensus 913 ~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~----~~-----~~~gt~~y~aPE~~~~ 983 (1075)
.+++.|+.|+|... ++||++|.|++|.+++.+..|++.|+.+.....+... ++ .......|.|||++.+
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34559999999984 9999999999999999999999999998765542211 11 1234568999999999
Q ss_pred CCCCcccchHhHHHHHHHHHh-CCCCCCccCccccchhhhhhhhhhccCCCCCCCCcCcHHHHHHHHHHHHHccCCCCCC
Q 042958 984 MKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSSSSLNLNIALDEMLDPRLPTPSCIVQDKLISIVEVAISCLDENPES 1062 (1075)
Q Consensus 984 ~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 1062 (1075)
...+.++|+||+|+++|-+.. |+.-+.............. ..+... ..+....+.++.+=+.+++..++.-
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~-----~~~~~~---~~~s~~~p~el~~~l~k~l~~~~~~ 255 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN-----LLNAGA---FGYSNNLPSELRESLKKLLNGDSAV 255 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc-----cccccc---ccccccCcHHHHHHHHHHhcCCccc
Confidence 888999999999999999995 4444433222111111000 000000 0111233456889999999999999
Q ss_pred CCCHHHHHhh
Q 042958 1063 RPTMPKVSQL 1072 (1075)
Q Consensus 1063 RPs~~evl~~ 1072 (1075)
||++.++...
T Consensus 256 rp~~~~l~~~ 265 (700)
T KOG2137|consen 256 RPTLDLLLSI 265 (700)
T ss_pred Ccchhhhhcc
Confidence 9988877653
No 490
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.44 E-value=1.5e-06 Score=91.97 Aligned_cols=136 Identities=16% Similarity=0.236 Sum_probs=97.1
Q ss_pred ceecccCceEEEEEEECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcC--ceeeEEEEeeccc--cchhheecC
Q 042958 821 HCIGKGGQGSVYKAELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHR--NIVKFYGFCSHVR--HSLAMILSN 896 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~--~~l~~~~~~ 896 (1075)
+.++.|..+.||+++..+|+.+++|........ ....++..|+++++.+++. .+.+++.+..... ....++++.
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 568999999999998876789999997653221 1235788999999999763 4577777766532 111122221
Q ss_pred ccc---c-----CCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 042958 897 NAA---A-----KDLGWTRRMNVIKGISDALSYMHNDC------------------------------------------ 926 (1075)
Q Consensus 897 ~~~---~-----~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------------ 926 (1075)
..+ . ..++..++..++.++++++.+||+..
T Consensus 82 i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 82 VDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred eCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 111 1 23566778889999999999999531
Q ss_pred -----------CCCeEEecCCCCCeeeCC--CCCceEeccccccc
Q 042958 927 -----------FPPIVHRDISSKNVLLDF--DNEAHVSDFGIAKF 958 (1075)
Q Consensus 927 -----------~~~ivH~Dlk~~Nill~~--~~~~kl~DfGla~~ 958 (1075)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 136799999999999998 56689999998764
No 491
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.40 E-value=6e-07 Score=87.09 Aligned_cols=132 Identities=20% Similarity=0.288 Sum_probs=84.8
Q ss_pred ceecccCceEEEEEEECCCCEEEEEEcc-CCC----CCchhHHHHHHHHHHHHhcCCcCcee--eEEEEeeccccchhhe
Q 042958 821 HCIGKGGQGSVYKAELASGEIVAVKKFH-SPL----PGEMTFQQEFLNEVKALTEIRHRNIV--KFYGFCSHVRHSLAMI 893 (1075)
Q Consensus 821 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~-~~~----~~~~~~~~~~~~E~~~l~~l~h~niv--~l~~~~~~~~~~l~~~ 893 (1075)
..+++|+-+.+|.+.+. |.++++|.-. +.. ....-......+|++++.+++--.|. .++++.... ..+.|.
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~-~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDN-GLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-CEEEEE
Confidence 35789999999999876 5556666432 211 11122334577899999988654443 344433322 122222
Q ss_pred ecCccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEeccccccc
Q 042958 894 LSNNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAKF 958 (1075)
Q Consensus 894 ~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~~ 958 (1075)
.-+...-++.-+..+..++..|-+-+.-||.. +|+|+|+.++||.+..+. +.++|||++.+
T Consensus 80 ~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEARPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhcchHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 22222111112222456788888889999999 999999999999998655 99999999975
No 492
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=4.2e-08 Score=100.25 Aligned_cols=186 Identities=26% Similarity=0.280 Sum_probs=96.9
Q ss_pred CCCccEEEccCCCccC--CCCccccccCCCceeecccCcccccCCCCCCCCCCCcEEEccCcccCCC-CCccccccCCcc
Q 042958 72 FPHLAYLDLWHNQLYG--NIPPQIGNISRLKYLDLSSNLFFGTIPPEIGHLSYLKTLQLFENQLNGS-IPYEIGRLSSLN 148 (1075)
Q Consensus 72 l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~ 148 (1075)
.++++.|||.+|.|+. .|..-+.+|++|++|+|+.|.+...|-..=..+++|++|-|.+..+.-. ....+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4667777777777754 5556666777777777777777644322114556777777777666521 112233344444
Q ss_pred eeecccccccCCCCCCCCCCCCCCEEEcCCCCCCCCCCc--cccCccccceEeeeccccccccCCCCcCCCCcCceeccc
Q 042958 149 YLALYSNYLEDLIPPSLGNLSNLDTLHLYDNSLSDSIPS--EFGNLRSLSMLSLGYNKFSGSIPHSLGNLTNLATLYLHN 226 (1075)
Q Consensus 149 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 226 (1075)
+|.++.|. ++.+.+.+|.++...+. .+..++.+..+.++-|++...+ +++..+.+..
T Consensus 150 elHmS~N~--------------~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~F-------pnv~sv~v~e 208 (418)
T KOG2982|consen 150 ELHMSDNS--------------LRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIF-------PNVNSVFVCE 208 (418)
T ss_pred hhhhccch--------------hhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhc-------ccchheeeec
Confidence 44444442 22233333333322211 1223334444445555554333 3555566666
Q ss_pred cCCCCCC-cccccCCCCCCeEeccCCCCCCcc-CCCCcccccccccccccccCc
Q 042958 227 NSLFDSI-PSELGNLRSLSMLSLGYNKLSGSI-PHSLGNLTNLATLYLYENSLS 278 (1075)
Q Consensus 227 N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~n~l~ 278 (1075)
|.+...- -+.+..++.+..|+|+.|++.+.- -+.+.++++|..|.+++|.+.
T Consensus 209 ~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 209 GPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred CcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 6554321 223444555556666666665311 234555566666666666655
No 493
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.35 E-value=2.1e-06 Score=82.78 Aligned_cols=136 Identities=19% Similarity=0.292 Sum_probs=88.2
Q ss_pred CCceecccCceEEEEEEECCCCEEEEEEcc-----CCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEe-eccccchhh
Q 042958 819 DEHCIGKGGQGSVYKAELASGEIVAVKKFH-----SPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFC-SHVRHSLAM 892 (1075)
Q Consensus 819 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~-----~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~l~~ 892 (1075)
....+-+|+-+.|+++.+. |+.+.||.-. .+.....-..++..+|++.+.+.+--.|....-++ ....+.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4577899999999999887 8887777432 22222223355678899999888543332222122 222333333
Q ss_pred eecCc-cccC--------CCCHH-HHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCC---CceEeccccccc
Q 042958 893 ILSNN-AAAK--------DLGWT-RRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDN---EAHVSDFGIAKF 958 (1075)
Q Consensus 893 ~~~~~-~~~~--------~l~~~-~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~DfGla~~ 958 (1075)
.+.+. .... +-... ....++.+|-+.+.-||.. .++|+||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 32221 1111 11112 2257888999999999999 999999999999997766 458999999864
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.35 E-value=8e-08 Score=98.25 Aligned_cols=186 Identities=29% Similarity=0.318 Sum_probs=91.7
Q ss_pred cccccccccccccCcC--CCCcccCCCccCcEEEccCCCCCCCcCCCCCccccccceecccccccCCC-Ccccccccccc
Q 042958 264 LTNLATLYLYENSLSG--SIPSEFGNLRSLSMLNLGYNKLNGIIPHSLGNLTNLATLYIHNNSLSGSI-PSEIGNLRSLS 340 (1075)
Q Consensus 264 l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~ 340 (1075)
.+.++++||.+|.|+. .+...+.++|.|+.|+|+.|.+...+...-..+.+|++|.|.+..+...- ...+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 3456666666666652 22334456666777777777666332211134556677766666665322 22344566666
Q ss_pred cccccCCcccccCCCcCCCCCCcceeeccccccCCCCcc--ccCCCcccceeeeccccccccCChhhccCCCCCeEEeec
Q 042958 341 NLGLSGNKLSGSIPPSLGYLSNLATLYLYSNSLFDSIPS--ELGNLRSLSMLSLGYNKLSGSIPHSLGNLTNLATLDLYD 418 (1075)
Q Consensus 341 ~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 418 (1075)
.|++|.|.+. .+.+..|.+...-|. .+..++.+..+.++-|++... ++++..+.+..
T Consensus 150 elHmS~N~~r--------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-------Fpnv~sv~v~e 208 (418)
T KOG2982|consen 150 ELHMSDNSLR--------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-------FPNVNSVFVCE 208 (418)
T ss_pred hhhhccchhh--------------hhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-------cccchheeeec
Confidence 6666666432 222333333221111 111222333333444444322 24566666666
Q ss_pred ccccccc-ccccccccccceecccccccccC-CCCCCccccccccccccCCccc
Q 042958 419 NSLSGSI-PSEFGNLRSLSTLSLGYNKLSGS-IPHSLGNLTNLDALYLYDNSLS 470 (1075)
Q Consensus 419 N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~ 470 (1075)
|.+...- ...+..++.+.-|+|+.|+|... .-+.+.+++.|..|.+++|.+.
T Consensus 209 ~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 209 GPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred CcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 6555322 22444555666666666666421 1234445555555556665554
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.28 E-value=5.5e-08 Score=88.16 Aligned_cols=59 Identities=29% Similarity=0.388 Sum_probs=27.0
Q ss_pred ccceecccccccccCCCCCCccccccccccccCCccccCCCccccCcCCCCEEeCCCCccc
Q 042958 434 SLSTLSLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGEIGNLRSISNLALNNNKLS 494 (1075)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 494 (1075)
.++.|+|++|.|+ .+|..+..++.|+.|+++.|.+. ..|..+..|.++..|+..+|.+.
T Consensus 78 t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 78 TATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred hhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 4444444444444 33444444444444444444444 33444444444444444444443
No 496
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.26 E-value=1.8e-05 Score=87.86 Aligned_cols=205 Identities=18% Similarity=0.197 Sum_probs=135.8
Q ss_pred CceEEEEE-EECCCCEEEEEEccCCCCCchhHHHHHHHHHHHHhcCCcCceeeEEEEeecccc---chhh----------
Q 042958 827 GQGSVYKA-ELASGEIVAVKKFHSPLPGEMTFQQEFLNEVKALTEIRHRNIVKFYGFCSHVRH---SLAM---------- 892 (1075)
Q Consensus 827 ~~g~Vy~~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~l~~---------- 892 (1075)
.-.+.||+ ...||..|++|+++....... ..-..-+++++++.|+|||++.+++..... .++.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 34578999 455899999999954332221 122356788999999999999776652111 1111
Q ss_pred ----eec-----------CccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecccccc
Q 042958 893 ----ILS-----------NNAAAKDLGWTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIAK 957 (1075)
Q Consensus 893 ----~~~-----------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla~ 957 (1075)
++. +...+...++...|.++.|++.||.++|+. |...+-+.+++|+++.+.+++|+..|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEeccccee
Confidence 111 112234467888899999999999999999 99999999999999999999999999887
Q ss_pred ccCCCCCceeccccccCccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccCccccchhhhhhhhhhccCCCCCCC
Q 042958 958 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSSSSLNLNIALDEMLDPRLPTP 1037 (1075)
Q Consensus 958 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1075)
....+.. |-+. --.+-|.=.+|.+++.+.||..--..-+. ......+.
T Consensus 442 vl~~d~~--------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~------~~~s~~~~--------- 489 (655)
T KOG3741|consen 442 VLQEDPT--------------EPLE---SQQQNDLRDLGLLLLALATGTENSNRTDS------TQSSHLTR--------- 489 (655)
T ss_pred eecCCCC--------------cchh---HHhhhhHHHHHHHHHHHhhcccccccccc------hHHHHHHH---------
Confidence 7665431 0011 12356999999999999999654110000 00000111
Q ss_pred CcCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHhh
Q 042958 1038 SCIVQDKLISIVEVAISCLDENPESRPTMPKVSQL 1072 (1075)
Q Consensus 1038 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1072 (1075)
....++.++++++.-.....+++ -+..+++.+
T Consensus 490 --I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 490 --ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred --hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 12344556777877777777776 567766654
No 497
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.21 E-value=8.4e-06 Score=82.26 Aligned_cols=124 Identities=25% Similarity=0.299 Sum_probs=77.6
Q ss_pred EEEEEEECCCCEEEEEEccCCCC-----------------------CchhHHHHHHHHHHHHhcCCcC--ceeeEEEEee
Q 042958 830 SVYKAELASGEIVAVKKFHSPLP-----------------------GEMTFQQEFLNEVKALTEIRHR--NIVKFYGFCS 884 (1075)
Q Consensus 830 ~Vy~~~~~~g~~vavK~~~~~~~-----------------------~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 884 (1075)
.||.|...+|..+|||..+.... ..........+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999888899999998753211 1111234577899999999765 466666553
Q ss_pred ccccchhheecC--ccccCC-----CCHHHHHHHHHHHHHHHHHH-HhCCCCCeEEecCCCCCeeeCCCCCceEeccccc
Q 042958 885 HVRHSLAMILSN--NAAAKD-----LGWTRRMNVIKGISDALSYM-HNDCFPPIVHRDISSKNVLLDFDNEAHVSDFGIA 956 (1075)
Q Consensus 885 ~~~~~l~~~~~~--~~~~~~-----l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk~~Nill~~~~~~kl~DfGla 956 (1075)
++.+.|.+-. ...... ++......++.++++.+..+ |.. +++|+|+.+.||+++++ .+.++|||.+
T Consensus 80 --~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iIDf~qa 153 (188)
T PF01163_consen 80 --RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYIIDFGQA 153 (188)
T ss_dssp --TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE--GTTE
T ss_pred --CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEEecCcc
Confidence 3333333222 111111 11234567788888866664 677 99999999999999987 9999999988
Q ss_pred cccC
Q 042958 957 KFLK 960 (1075)
Q Consensus 957 ~~~~ 960 (1075)
....
T Consensus 154 v~~~ 157 (188)
T PF01163_consen 154 VDSS 157 (188)
T ss_dssp EETT
T ss_pred eecC
Confidence 7654
No 498
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.19 E-value=9.3e-06 Score=83.76 Aligned_cols=138 Identities=23% Similarity=0.205 Sum_probs=93.9
Q ss_pred CCCCceecccCceEEEEEEECCCCEEEEEEccCCC-----------------CCch--hHHHHHHHHHHHHhcCCcC--c
Q 042958 817 FDDEHCIGKGGQGSVYKAELASGEIVAVKKFHSPL-----------------PGEM--TFQQEFLNEVKALTEIRHR--N 875 (1075)
Q Consensus 817 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~-----------------~~~~--~~~~~~~~E~~~l~~l~h~--n 875 (1075)
+.++..||.|--+.||.|....|.++|||.=+... ..++ ..+....+|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34567899999999999988889999999532211 0111 1233467899999999654 6
Q ss_pred eeeEEEEeeccccchhheecCccccCCCC--HHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeeeCCCCCceEecc
Q 042958 876 IVKFYGFCSHVRHSLAMILSNNAAAKDLG--WTRRMNVIKGISDALSYMHNDCFPPIVHRDISSKNVLLDFDNEAHVSDF 953 (1075)
Q Consensus 876 iv~l~~~~~~~~~~l~~~~~~~~~~~~l~--~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 953 (1075)
|.+.+++- ++...|.+-+......+. ....-.+...|++-+...-.. ||||+|+.+-||++++||.+.++||
T Consensus 173 VP~P~~~n---RHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~dg~~~vIDw 246 (304)
T COG0478 173 VPKPIAWN---RHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTEDGDIVVIDW 246 (304)
T ss_pred CCCccccc---cceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecCCCEEEEeC
Confidence 77776653 444444433332222222 444445566666665555566 9999999999999999999999999
Q ss_pred ccccccC
Q 042958 954 GIAKFLK 960 (1075)
Q Consensus 954 Gla~~~~ 960 (1075)
--+....
T Consensus 247 PQ~v~~~ 253 (304)
T COG0478 247 PQAVPIS 253 (304)
T ss_pred cccccCC
Confidence 7665433
No 499
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.19 E-value=9.1e-08 Score=86.79 Aligned_cols=109 Identities=28% Similarity=0.400 Sum_probs=68.9
Q ss_pred cceeeccccccCCCCccc---cCCCcccceeeeccccccccCChhhc-cCCCCCeEEeecccccccccccccccccccee
Q 042958 363 LATLYLYSNSLFDSIPSE---LGNLRSLSMLSLGYNKLSGSIPHSLG-NLTNLATLDLYDNSLSGSIPSEFGNLRSLSTL 438 (1075)
Q Consensus 363 L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 438 (1075)
+-.++|++|++ ..+++. +.....|+..+|++|.+. ..|..|. ..+.++.|+|++|.|. .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchh-hHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 34456666665 333333 333445566677777776 3444443 3456777777777776 455567777777777
Q ss_pred cccccccccCCCCCCccccccccccccCCccccCCCcc
Q 042958 439 SLGYNKLSGSIPHSLGNLTNLDALYLYDNSLSGSIPGE 476 (1075)
Q Consensus 439 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 476 (1075)
+++.|.+. ..|..+..|.+|..|+..+|.+. .+|..
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~d 141 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVD 141 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHH
Confidence 77777777 55666666777777777777776 44443
No 500
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.18 E-value=1.4e-07 Score=95.25 Aligned_cols=187 Identities=20% Similarity=0.235 Sum_probs=101.7
Q ss_pred CCCCccEEEccCCCccC----CCCccccccCCCceeecccCcc---cccCC-------CCCCCCCCCcEEEccCcccCCC
Q 042958 71 SFPHLAYLDLWHNQLYG----NIPPQIGNISRLKYLDLSSNLF---FGTIP-------PEIGHLSYLKTLQLFENQLNGS 136 (1075)
Q Consensus 71 ~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~n~l---~~~~p-------~~l~~l~~L~~L~Ls~n~l~~~ 136 (1075)
.+..++.+|||+|.|.. .+...+.+-.+|+..++|+-.. ...+| ..+.+++.|+..+||.|.|+..
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~ 107 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSE 107 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcc
Confidence 35667788888888854 3455566667777777776322 11222 3445677777777777777766
Q ss_pred CCccccccCCcceeecccccccCCCCCCCCCCCCCCEEEcCCCCCCCCCCccc-------------cCccccceEeeecc
Q 042958 137 IPYEIGRLSSLNYLALYSNYLEDLIPPSLGNLSNLDTLHLYDNSLSDSIPSEF-------------GNLRSLSMLSLGYN 203 (1075)
Q Consensus 137 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~-------------~~l~~L~~L~Ls~N 203 (1075)
.|..+.. .+++-+.|++|.|++|.+.-....-+ .+-|.|++.....|
T Consensus 108 ~~e~L~d--------------------~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrN 167 (388)
T COG5238 108 FPEELGD--------------------LISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRN 167 (388)
T ss_pred cchHHHH--------------------HHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccc
Confidence 6655332 24455666666666666542211111 23355666666666
Q ss_pred ccccccCCC-----CcCCCCcCceeccccCCCCCC-----cccccCCCCCCeEeccCCCCCCc----cCCCCcccccccc
Q 042958 204 KFSGSIPHS-----LGNLTNLATLYLHNNSLFDSI-----PSELGNLRSLSMLSLGYNKLSGS----IPHSLGNLTNLAT 269 (1075)
Q Consensus 204 ~l~~~~~~~-----l~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~ 269 (1075)
++. ..+.. +..-.+|+++.+..|.|.-.- -..+..+.+|++|||..|-++-. +..++...+.|++
T Consensus 168 Rle-ngs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 168 RLE-NGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred hhc-cCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 665 22211 122245666666666653110 01123456667777776666521 1223334445566
Q ss_pred cccccccCc
Q 042958 270 LYLYENSLS 278 (1075)
Q Consensus 270 L~L~~n~l~ 278 (1075)
|.+..|-++
T Consensus 247 L~lnDClls 255 (388)
T COG5238 247 LRLNDCLLS 255 (388)
T ss_pred ccccchhhc
Confidence 666666555
Done!