Your job contains 1 sequence.
>042962
MESETNPNAANGDMISALLAPILHHILSFLSIEQVWHSHPGVECNGSLSMSPENTLKCLV
KTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSNYPD
SYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDLISGCP
LIEFISIISCRGLKHLELPNLGKLKEFKVYDEYGLEQVYIQGMNAHSVHIIGLHMLPHIS
VVPCKNLKKLKLCQEIVDCMKLRSIKISSFCLKSFLFIGYDTLDELKLCTPNLSIFKYHG
DLISFSSTALALSEIALVFNPDNINNQWFHVSFYIHSEYLNFSLAKLVDGLLWIAHHAGT
LLMMCIQNDCDYELSFK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042962
(377 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151246 - symbol:AT5G02920 "AT5G02920" species... 142 2.4e-07 1
TAIR|locus:2151316 - symbol:AT5G02700 "AT5G02700" species... 138 2.7e-06 1
TAIR|locus:2151261 - symbol:AT5G02930 "AT5G02930" species... 136 4.7e-06 1
TAIR|locus:2088882 - symbol:AT3G28410 "AT3G28410" species... 124 9.9e-05 1
TAIR|locus:2151231 - symbol:AT5G02910 "AT5G02910" species... 121 0.00021 1
TAIR|locus:2099644 - symbol:AT3G03360 species:3702 "Arabi... 117 0.00029 3
TAIR|locus:2092737 - symbol:AT3G18150 "AT3G18150" species... 119 0.00034 1
>TAIR|locus:2151246 [details] [associations]
symbol:AT5G02920 "AT5G02920" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF81383
EMBL:AL162973 HOGENOM:HOG000097837 EMBL:DQ446914 IPI:IPI00525957
PIR:T48313 RefSeq:NP_568109.2 UniGene:At.54694
ProteinModelPortal:Q1PE04 SMR:Q1PE04 EnsemblPlants:AT5G02920.1
GeneID:831396 KEGG:ath:AT5G02920 TAIR:At5g02920 eggNOG:NOG250366
InParanoid:Q1PE04 OMA:EIERRSC PhylomeDB:Q1PE04
Genevestigator:Q1PE04 Uniprot:Q1PE04
Length = 258
Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 57/227 (25%), Positives = 101/227 (44%)
Query: 11 NGDMISALLAPILHHILSFLSIEQ--VWHSHPGVECNGSLSMSPENTLKCLVKT--LLNH 66
+ D IS L ILHHILSF+ + S S +P + + L+ + L+N
Sbjct: 26 SSDSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFEWLMVSPKLINK 85
Query: 67 YGDDFSLEKFTFIVQLSDDVKFVSS-IYRCLRYAVETNVKELKLGFCC--PHSNYPDSYY 123
++ K T L + + ++ + +A+ NV L L F P + +PD +Y
Sbjct: 86 TLASYTASKITSF-HLCTSYSYEAGHVHSSIEFAMSHNVDNLSLAFSSFPPCNKFPDFFY 144
Query: 124 NLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDLISGCPLIE 183
+ S+ + L S L +P V+ + LR+L D+ ++SGCP++E
Sbjct: 145 T-------SSSLKRVELRSASL-TPSCIVSWTSLRDLSLTRCNLSDKSFLKILSGCPILE 196
Query: 184 FISIISCRGLKHLELPNLGKLKEFKVYDEYGLEQVYIQGMNAHSVHI 230
+S+ C LK+L+L +L ++ + + +Q M + HI
Sbjct: 197 SLSLKFCESLKYLDLSKSLRLTRLEI-ERRSCFREPMQSMQIVAPHI 242
>TAIR|locus:2151316 [details] [associations]
symbol:AT5G02700 "AT5G02700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 EMBL:AL162973 HOGENOM:HOG000097837 eggNOG:NOG278966
IPI:IPI00541116 PIR:T48291 RefSeq:NP_195890.1 UniGene:At.54690
ProteinModelPortal:Q9LZ15 SMR:Q9LZ15 EnsemblPlants:AT5G02700.1
GeneID:831837 KEGG:ath:AT5G02700 TAIR:At5g02700 InParanoid:Q9LZ15
OMA:LHINIAP PhylomeDB:Q9LZ15 ProtClustDB:CLSN2684081
Genevestigator:Q9LZ15 Uniprot:Q9LZ15
Length = 456
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 52/208 (25%), Positives = 97/208 (46%)
Query: 13 DMISALLAPILHHILSFLSIEQVWHSHP-GVECNGSLSMSP--ENTLK--CLVKTLLNHY 67
D I+ + ILHHILSF+ + + +P + TLK + +TL ++
Sbjct: 27 DFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDITLKHGAMNQTLTSYT 86
Query: 68 GDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSNYPDSYYNLPQ 127
+ F ++ L+ + V + + +A+ NV+ L + F + Y +Y P
Sbjct: 87 AP--IITSFKLVMDLNSNT--VPQVDSWIEFALSRNVQNLSV-FVRDFT-YSKTY-RFPD 139
Query: 128 LVFYAKSMSLLG--LDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDLISGCPLIEFI 185
+ + + S+ LL LD + P V+ LR L R D+ I +++SGCP++E +
Sbjct: 140 IFYLSSSLKLLDVTLDFFDM-IPTCTVSWKSLRNLTLRFCQIPDESIHNILSGCPILESL 198
Query: 186 SIISCRGLKHLELPNLGKLKEFKVYDEY 213
++ +CR L+ L+L L+ + +Y
Sbjct: 199 TLDTCRLLERLDLSKSPNLRRLDINQQY 226
>TAIR|locus:2151261 [details] [associations]
symbol:AT5G02930 "AT5G02930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 EMBL:AL162973 HOGENOM:HOG000097837 IPI:IPI00533021
PIR:T48314 RefSeq:NP_195913.1 UniGene:At.4984 UniGene:At.54695
ProteinModelPortal:Q9LYZ2 SMR:Q9LYZ2 EnsemblPlants:AT5G02930.1
GeneID:831737 KEGG:ath:AT5G02930 TAIR:At5g02930 eggNOG:NOG282069
InParanoid:Q9LYZ2 OMA:ASFMELL PhylomeDB:Q9LYZ2
ProtClustDB:CLSN2916898 Genevestigator:Q9LYZ2 Uniprot:Q9LYZ2
Length = 469
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 54/212 (25%), Positives = 90/212 (42%)
Query: 13 DMISALLAPILHHILSFLSIE-------------QVWHSHPGVECNGSLSMSPENTLKCL 59
D IS L +L HI S++ E VW P + L +SP K +
Sbjct: 28 DSISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSFEW-LKVSP----KLI 82
Query: 60 VKTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGF--CCPHSN 117
KTL ++ ++ F + S + + + +A+ NV +L L F C P N
Sbjct: 83 NKTLASYTAS--KIKSFHLCTRYSYEAD-THHVNSSIEFAMSHNVDDLSLAFRRCSPFYN 139
Query: 118 YPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDLIS 177
+ D +Y L K + L +D PR V+ + L+ L D+ +++S
Sbjct: 140 FDDCFYTNSSL----KRVELRYVDLM----PRCMVSWTSLKNLSLTDCTMSDESFLEILS 191
Query: 178 GCPLIEFISIISCRGLKHLELPNLGKLKEFKV 209
GCP++E +S+ C LK+L L +L ++
Sbjct: 192 GCPILESLSLKFCMSLKYLNLSKSLRLTRLEI 223
>TAIR|locus:2088882 [details] [associations]
symbol:AT3G28410 "AT3G28410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AB026644 HOGENOM:HOG000097837 IPI:IPI00543931
RefSeq:NP_189482.1 UniGene:At.53539 ProteinModelPortal:Q9LSJ3
SMR:Q9LSJ3 PRIDE:Q9LSJ3 EnsemblPlants:AT3G28410.1 GeneID:822470
KEGG:ath:AT3G28410 TAIR:At3g28410 eggNOG:NOG278966
InParanoid:Q9LSJ3 OMA:GCNDATS Genevestigator:Q9LSJ3 Uniprot:Q9LSJ3
Length = 465
Score = 124 (48.7 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 53/211 (25%), Positives = 94/211 (44%)
Query: 13 DMISALLAPILHHILSFLSIEQVWHSHP-GVECNGSLSMSPENTLKCL---VKTLLNHYG 68
D I+ + ILHHILSF+ + + +P +K L Y
Sbjct: 28 DFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDIKLKHGETNQTLTSYT 87
Query: 69 DDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSNYPDSYYNLPQL 128
+ F ++ L+D+ V + + +A+ NV+ L + F + Y +Y P +
Sbjct: 88 API-ITSFKLVMDLNDNT--VPQVDSWIEFALSRNVQNLSV-FVRDFT-YTKTY-RFPDI 141
Query: 129 VFYAKSMSLLG--LDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDLISGCPLIEFIS 186
+ + S+ L LD + P V+ LR L R D+ + +++SGCP++E ++
Sbjct: 142 FYISSSLKQLDVTLDFFDM-IPTCAVSWKSLRNLTLRFCQIPDESMHNILSGCPILESLT 200
Query: 187 IISCRGLKHLEL---PNLGKLKEFKVYDEYG 214
+ +CR L+ L+L PNL +L + Y G
Sbjct: 201 LDTCRLLERLDLSKSPNLRRLDINRQYRRTG 231
>TAIR|locus:2151231 [details] [associations]
symbol:AT5G02910 "AT5G02910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 EMBL:AL162973 HOGENOM:HOG000097837 EMBL:AY084393
EMBL:BT029182 IPI:IPI00541717 PIR:T48312 RefSeq:NP_195911.1
UniGene:At.33348 ProteinModelPortal:Q9LYZ4 SMR:Q9LYZ4
EnsemblPlants:AT5G02910.1 GeneID:831746 KEGG:ath:AT5G02910
TAIR:At5g02910 InParanoid:Q9LYZ4 OMA:MATTLSH PhylomeDB:Q9LYZ4
ProtClustDB:CLSN2916897 Genevestigator:Q9LYZ4 Uniprot:Q9LYZ4
Length = 458
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 47/201 (23%), Positives = 85/201 (42%)
Query: 13 DMISALLAPILHHILSFLSIEQ-VWHSHPGVECNGSLSMSPENTLKC--LVKTLLNHYGD 69
D IS+L ILHHILS + + + S S +P ++ C ++
Sbjct: 11 DFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCRRADPNSIDKTLS 70
Query: 70 DFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSNYPDSYYNLPQLV 129
FS K T + + + S+ C+ +A+ N ++L L +Y Y P
Sbjct: 71 FFSAPKITSFHLHTTLLNRIDSVNGCIEFAISHNAEKLSL----ESRDYRVRNYKFPDFF 126
Query: 130 FYAKSMSLLGLDSCKLES-PRGNVTLSCLRELRPRHVCADDQVIKDLISGCPLIEFISII 188
+ S+ L +DS + PR V+ + L+ L + D+ ++SG PL+E + ++
Sbjct: 127 YTNSSVKQLFVDSGSVHLIPRCTVSWTSLKNLSLSNCTLSDESFLKILSGSPLLESLELL 186
Query: 189 SCRGLKHLELPNLGKLKEFKV 209
C L+L L+ ++
Sbjct: 187 YCAEYMCLDLSQSQHLRRLEI 207
>TAIR|locus:2099644 [details] [associations]
symbol:AT3G03360 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF81383 EMBL:AC009895
HOGENOM:HOG000097837 EMBL:BT004131 EMBL:AK318807 EMBL:AK229563
EMBL:AK229911 IPI:IPI00527984 IPI:IPI00845135 IPI:IPI00944252
RefSeq:NP_186986.1 UniGene:At.48615 UniGene:At.74916
ProteinModelPortal:Q84W80 SMR:Q84W80 PRIDE:Q84W80
EnsemblPlants:AT3G03360.1 GeneID:821272 KEGG:ath:AT3G03360
TAIR:At3g03360 eggNOG:NOG316608 InParanoid:Q84W80 OMA:ADIDSWI
PhylomeDB:Q84W80 ProtClustDB:CLSN2913395 Genevestigator:Q84W80
Uniprot:Q84W80
Length = 481
Score = 117 (46.2 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 35/142 (24%), Positives = 69/142 (48%)
Query: 96 LRYAVETNVKELKLGFCCPHSNYPDS-YYNLPQLVFYAKSMSLLGLD-SCKLE----SPR 149
+ +A+ NV+ L L Y D Y++P+ ++ S+ L LD CK + +P+
Sbjct: 130 INFAMSRNVENLSL--------YLDEDKYDIPEFLYINSSLKQLYLDFGCKKDFISLNPK 181
Query: 150 GNVTLSCLRELRPRHVCADDQVIKDLISGCPLIEFISIISCRGLKHLELPNLGKLKEFKV 209
+V+ + L+ L H D+ I ++SGCP++E + + C+ LK L+L +L ++
Sbjct: 182 CSVSWTSLKNLSLYHCNISDESIAIILSGCPILESLLLFFCKKLKVLDLSKSPRLITLEI 241
Query: 210 YDEYGLEQVYIQGMNAHSVHII 231
+E + + + +I
Sbjct: 242 TRRCRMEPTQLVAPHIRCLRLI 263
Score = 43 (20.2 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 12 GDMISALLAPILHHILSFL 30
GD+IS L IL ILS+L
Sbjct: 36 GDLISRLPDDILQLILSYL 54
Score = 38 (18.4 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 244 CKNLKKLKLCQEIVDCMKLRSIKISSF 270
C+N++KL L + + L ++ SF
Sbjct: 310 CQNVEKLTLGANFLKMLSLAELRGVSF 336
>TAIR|locus:2092737 [details] [associations]
symbol:AT3G18150 "AT3G18150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AB020749 IPI:IPI00544874 RefSeq:NP_188443.2
UniGene:At.74522 ProteinModelPortal:Q9LV26 SMR:Q9LV26 PaxDb:Q9LV26
PRIDE:Q9LV26 EnsemblPlants:AT3G18150.1 GeneID:821341
KEGG:ath:AT3G18150 TAIR:At3g18150 eggNOG:NOG295494 OMA:NTIRKEY
PhylomeDB:Q9LV26 Genevestigator:Q9LV26 Uniprot:Q9LV26
Length = 456
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 65/273 (23%), Positives = 118/273 (43%)
Query: 13 DMISALLAPILHHILSFLS---------IEQVWHSHPGVECNG-SLSMSPENTLKCLVKT 62
D IS+L IL HILSF+ + + W H V C+ SLS + +
Sbjct: 31 DSISSLPDVILQHILSFIPTKLAITTSLLSKRWR-H--VWCDTPSLSFNDYRLEAPFIDE 87
Query: 63 LLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSNYPDSY 122
L Y + +F L ++V + S +++A+ NV L L N +
Sbjct: 88 TLTRYTAS-KMMRFHLHTSLINNVPHLES---WIKFAMSRNVDHLSLDLW----NQVANK 139
Query: 123 YNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDLISGCPLI 182
+ P F+ S SL L + L+ + + CL++L D+ + +++ GCP++
Sbjct: 140 FKFPDF-FHINS-SLKQL-TVVLDFSDTMIAI-CLKKLYLSTCLLSDESMANILFGCPIL 195
Query: 183 EFISIISCRGLKHLELPNLGKLKEFKVYDEYGLEQVYIQGMNAHSVHIIGLHMLPHISVV 242
E +++ C GL+ L+L +L+ ++ +++ + A + + PH
Sbjct: 196 ESLTLDHCGGLRVLDLSKSLRLRTLEINCN-----IWVPELTAMQI------VAPHTH-- 242
Query: 243 PCKNLKKLKLCQEIVDCMKLRSIKISSFCLKSF 275
C L+ KL +VD L+ K++ C+ SF
Sbjct: 243 -CLRLRNSKLPCSLVDVSSLKEAKLN-ICIDSF 273
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 377 377 0.00089 117 3 11 22 0.48 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 618 (66 KB)
Total size of DFA: 273 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.29u 0.12s 32.41t Elapsed: 00:00:01
Total cpu time: 32.29u 0.12s 32.41t Elapsed: 00:00:01
Start: Sat May 11 11:42:37 2013 End: Sat May 11 11:42:38 2013