BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042962
(377 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1PE04|FBL25_ARATH F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana GN=FBL25 PE=2
SV=1
Length = 258
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 11 NGDMISALLAPILHHILSFL--------------SIEQVWHSHPGVECNGSLSMSPENTL 56
+ D IS L ILHHILSF+ VW P + L +SP
Sbjct: 26 SSDSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFEW-LMVSP---- 80
Query: 57 KCLVKTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCC--P 114
K + KTL ++ + F S + V S + +A+ NV L L F P
Sbjct: 81 KLINKTLASYTASK--ITSFHLCTSYSYEAGHVHS---SIEFAMSHNVDNLSLAFSSFPP 135
Query: 115 HSNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKD 174
+ +PD +Y + S+ + L S L +P V+ + LR+L D+
Sbjct: 136 CNKFPDFFYT-------SSSLKRVELRSASL-TPSCIVSWTSLRDLSLTRCNLSDKSFLK 187
Query: 175 LISGCPLIEFISIISCRGLKHLELPNLGKLKEFKVYDEYGLEQVYIQGMNAHSVHI 230
++SGCP++E +S+ C LK+L+L +L ++ + +Q M + HI
Sbjct: 188 ILSGCPILESLSLKFCESLKYLDLSKSLRLTRLEIERRSCFREP-MQSMQIVAPHI 242
>sp|Q9LYZ2|FBL80_ARATH Putative F-box/LRR-repeat protein At5g02930 OS=Arabidopsis thaliana
GN=At5g02930 PE=4 SV=1
Length = 469
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 13 DMISALLAPILHHILSFLSIE-------------QVWHSHPGVECNGSLSMSPENTLKCL 59
D IS L +L HI S++ E VW P + L +SP K +
Sbjct: 28 DSISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSFEW-LKVSP----KLI 82
Query: 60 VKTLLNHYGDDFSLEKFTFIVQLS--DDVKFVSSIYRCLRYAVETNVKELKLGF--CCPH 115
KTL ++ ++ F + S D V+S + +A+ NV +L L F C P
Sbjct: 83 NKTLASYTAS--KIKSFHLCTRYSYEADTHHVNS---SIEFAMSHNVDDLSLAFRRCSPF 137
Query: 116 SNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDL 175
N+ D +Y L K + L +D PR V+ + L+ L D+ ++
Sbjct: 138 YNFDDCFYTNSSL----KRVELRYVDLM----PRCMVSWTSLKNLSLTDCTMSDESFLEI 189
Query: 176 ISGCPLIEFISIISCRGLKHLELPNLGKLKEFKV 209
+SGCP++E +S+ C LK+L L +L ++
Sbjct: 190 LSGCPILESLSLKFCMSLKYLNLSKSLRLTRLEI 223
>sp|Q9LZ15|FBL78_ARATH Putative F-box/LRR-repeat protein At5g02700 OS=Arabidopsis thaliana
GN=At5g02700 PE=4 SV=1
Length = 456
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 12 GDMISALLAPILHHILSFLSIE-------------QVWHSHPGVECNGSLSMSPENTLK- 57
D I+ + ILHHILSF+ + VW P ++ TLK
Sbjct: 26 ADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDI----------TLKH 75
Query: 58 -CLVKTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHS 116
+ +TL ++ + F ++ L+ + V + + +A+ NV+ L +
Sbjct: 76 GAMNQTLTSYTAPIIT--SFKLVMDLNSNT--VPQVDSWIEFALSRNVQNLSV--FVRDF 129
Query: 117 NYPDSYYNLPQLVFYAKSMSLLGLDSCKLES-PRGNVTLSCLRELRPRHVCADDQVIKDL 175
Y +Y P + + + S+ LL + + P V+ LR L R D+ I ++
Sbjct: 130 TYSKTY-RFPDIFYLSSSLKLLDVTLDFFDMIPTCTVSWKSLRNLTLRFCQIPDESIHNI 188
Query: 176 ISGCPLIEFISIISCRGLKHLEL---PNLGKLKEFKVYDEYG 214
+SGCP++E +++ +CR L+ L+L PNL +L + Y G
Sbjct: 189 LSGCPILESLTLDTCRLLERLDLSKSPNLRRLDINQQYRRTG 230
>sp|Q9LSJ3|FBL48_ARATH Putative F-box/LRR-repeat protein At3g28410 OS=Arabidopsis thaliana
GN=At3g28410 PE=4 SV=2
Length = 465
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 32/220 (14%)
Query: 12 GDMISALLAPILHHILSFLSIE-------------QVWHSHPGVECNGSLSMSPENTLKC 58
D I+ + ILHHILSF+ + VW P ++ L N
Sbjct: 27 ADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDIK--LKHGETN---- 80
Query: 59 LVKTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSNY 118
+TL ++ + F ++ L+D+ V + + +A+ NV+ L + Y
Sbjct: 81 --QTLTSYTAPIIT--SFKLVMDLNDNT--VPQVDSWIEFALSRNVQNLSV--FVRDFTY 132
Query: 119 PDSYYNLPQLVFYAKSMSLLGLDSCKLES-PRGNVTLSCLRELRPRHVCADDQVIKDLIS 177
+Y P + + + S+ L + + P V+ LR L R D+ + +++S
Sbjct: 133 TKTY-RFPDIFYISSSLKQLDVTLDFFDMIPTCAVSWKSLRNLTLRFCQIPDESMHNILS 191
Query: 178 GCPLIEFISIISCRGLKHLEL---PNLGKLKEFKVYDEYG 214
GCP++E +++ +CR L+ L+L PNL +L + Y G
Sbjct: 192 GCPILESLTLDTCRLLERLDLSKSPNLRRLDINRQYRRTG 231
>sp|Q9FLA2|FDL34_ARATH Putative F-box/FBD/LRR-repeat protein At5g44950 OS=Arabidopsis
thaliana GN=At5g44950 PE=4 SV=1
Length = 438
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 42/240 (17%)
Query: 13 DMISALLAPILHHILSFLSIEQ-------------VWHSHPGVECNGSLSMSPENTLKCL 59
D IS L +L+HIL +L IE+ +W PG++ N + N + L
Sbjct: 4 DRISELPDGLLNHILMYLHIEESIRTSVLSSRWRKLWLKVPGLDVNVHDFPADGNLFESL 63
Query: 60 VKTLLN-HYG--DDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFC-CPH 115
+ L + G +F L + + L D +FV I V+ ++ L + CP
Sbjct: 64 MDKFLEVNRGRLQNFKLNYESNLYYLMD--RFVPWIAT----VVDRGIQHLDVTATDCP- 116
Query: 116 SNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDL 175
P + +P + +K++ L L + L++P+ V+L CL+ + + + ++L
Sbjct: 117 ---PWTIDFMPANICKSKTLVSLKLVNVGLDTPKFVVSLPCLKIMHLEDIFYSPLIAENL 173
Query: 176 ISGCPLIEFISIISCRGLKHLELPNLGK-----LKEFKVYDEYGLEQVYIQGMNAHSVHI 230
ISGCP++E ++I+ H + N + LK F++ ++G+ G N SV I
Sbjct: 174 ISGCPVLEDLTIVR----NHEDFLNFLRVMSQTLKNFRLTFDWGM------GSNDFSVEI 223
>sp|Q84W80|FBL42_ARATH F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana
GN=At3g03360 PE=2 SV=2
Length = 481
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 96 LRYAVETNVKELKLGFCCPHSNYPDSYYNLPQLVFYAKSMSLLGLD-SCKLE----SPRG 150
+ +A+ NV+ L L + Y++P+ ++ S+ L LD CK + +P+
Sbjct: 130 INFAMSRNVENLSLYL-------DEDKYDIPEFLYINSSLKQLYLDFGCKKDFISLNPKC 182
Query: 151 NVTLSCLRELRPRHVCADDQVIKDLISGCPLIEFISIISCRGLKHLELPNLGKLKEFKVY 210
+V+ + L+ L H D+ I ++SGCP++E + + C+ LK L+L +L ++
Sbjct: 183 SVSWTSLKNLSLYHCNISDESIAIILSGCPILESLLLFFCKKLKVLDLSKSPRLITLEIT 242
Query: 211 DEYGLEQVYIQGMNAHSVHIIG 232
+E + + + +I
Sbjct: 243 RRCRMEPTQLVAPHIRCLRLIN 264
>sp|Q501G5|FB250_ARATH F-box protein At5g03100 OS=Arabidopsis thaliana GN=At5g03100 PE=2
SV=1
Length = 307
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 8 NAANG-DMISALLAPILHHIL-----------SFLS--IEQVWHSHPGVE--CNGSLSMS 51
A G D IS+L ILHHIL S LS + VW+ P + CN +
Sbjct: 3 RAGGGVDFISSLPDEILHHILANTPTKLAIRTSVLSKRWKHVWYETPSISIVCN---RVD 59
Query: 52 PENTLKCLVKTLLNHYGDDFSLEKF-TFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLG 110
P++ LN +S K +F V +S DV V I + A+ + + L
Sbjct: 60 PDS---------LNKTLSSYSTPKIKSFDVTISRDVT-VPEIDTWINLALSRKAENVSLR 109
Query: 111 FCCPHSNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQ 170
F H + D+++ L K +SL L C L +P+ V+ S LR L D
Sbjct: 110 FTS-HYRFRDTFFINSSL----KQLSL-TLVYCIL-NPKCVVSWSSLRNLSLNRCKVSDD 162
Query: 171 VIKDLISGCPLIEFISIISCRGLKHLELPNLGKLKEFKVY-DEYGLEQV 218
I +++GC L+E +++ C L L+L L+ ++ D + E++
Sbjct: 163 SIAKILTGCSLLESLTLNLCDRLNDLDLSKSLSLRRLEILGDRWTPERI 211
>sp|Q9FZ70|FDL1_ARATH F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana
GN=At1g13570 PE=2 SV=1
Length = 416
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 9 AANGDMISALLAPILHHILSFLSIEQV-------------WHSHPGVECNGSLSMSPENT 55
+ D IS L I+ +IL+ LSI W + + + +SP N
Sbjct: 2 GESPDFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEK-CVSPSND 60
Query: 56 LKCLVKT---------LLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKE 106
+C+V+T LL H G + T Q D+ + L + +KE
Sbjct: 61 -RCVVETNLVRFITGVLLLHQGPIHKFQLSTSFKQCRPDID------QWLLFLSRNGIKE 113
Query: 107 L--KLGFCCPHSNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRH 164
L KLG + + +P +F ++ L L C+ + P+ S L+ L
Sbjct: 114 LVLKLG---------EGEFRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYLKSLNLHQ 164
Query: 165 VCADDQVIKDLISGCPLIEFISI 187
+ +VI+ LISGCPL+EF+S+
Sbjct: 165 ILVAPEVIESLISGCPLLEFLSL 187
>sp|Q9FX89|FB50_ARATH Putative F-box protein At1g49610 OS=Arabidopsis thaliana
GN=At1g49610 PE=4 SV=2
Length = 385
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 96 LRYAVETNVKELKLGFCCPHSNYPDSYY---NLPQLVFYAKSMSLLGLDSCKLESPRGNV 152
+++A+ NV+ L L F + PD Y ++ QLV LG +S +L +PR +V
Sbjct: 113 IKFAMSRNVENLFLSFDFRLYDVPDYLYINSSVKQLV--------LGTESSEL-NPRCSV 163
Query: 153 TLSCLRELRPRHVCADDQVIKDLISGCPLIEFISIISCRGLKHLELPNLGKLKEFKVYDE 212
+ S L +L D+ I ++SGCP+IE +++ C L L+L LK +++
Sbjct: 164 SWSSLTKLS----LFSDESIAKILSGCPIIESLTLHFCDQLMVLDLTKSPSLKILEIHGS 219
Query: 213 -YGLEQVYIQGMNAHSVHI 230
+G +I + HS+ +
Sbjct: 220 IWGSGPKHIVAPHIHSLTL 238
>sp|Q56XS8|FDL2_ARATH F-box/FBD/LRR-repeat protein At1g13780 OS=Arabidopsis thaliana
GN=At1g13780 PE=2 SV=1
Length = 456
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 46/265 (17%)
Query: 1 MESETNPNAAN-GDMISALLAPILHHILSFLSIE---------QVWHSHPGVECNGSLSM 50
MES P ++ +L++ IL H+ + S++ +W + PG++ N
Sbjct: 1 MESTVMPGFDRISELPESLISQILLHLPTKASVKTSVLSTRWKNLWLNVPGLDLNCRDFP 60
Query: 51 SPENTLKCLV-----------KTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRY- 98
N K L+ ++ L + D+S +K I++ SD + +I R +R
Sbjct: 61 FQNNNEKLLIDFIDRFLQFNNESRLQKFKVDYSRDK---IIKFSDRIG--DAISRGIRVL 115
Query: 99 AVETNVKELKLGFCCPHSNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLR 158
VE+N C +YP + +P ++ K++ L L LE P G V L CL+
Sbjct: 116 DVESNTYYRDADDCI---DYPCIEF-MPLNLYSCKTLVSLKLSYSGLEDP-GFVYLPCLK 170
Query: 159 ELRPRHVCADDQV---IKDLISGCPLIE----------FISIISCRGLKHLELPNLGKLK 205
+ R V D ++ L+SGCP++E ++ + R LK +P KL
Sbjct: 171 FMHLREVRWDSSGTMNLEKLVSGCPVLEELIYLHDDKLVVTRVRSRSLKRFSIPFRHKLS 230
Query: 206 EF-KVYDEYGLEQVYIQGMNAHSVH 229
F +V + ++ ++ M+ + H
Sbjct: 231 LFRRVTQTFEIDAPGLEYMSLKADH 255
>sp|Q9LV26|FBL45_ARATH Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana
GN=At3g18150 PE=4 SV=2
Length = 456
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 117/283 (41%), Gaps = 60/283 (21%)
Query: 13 DMISALLAPILHHILSFLSIE-------------QVWHSHPGVECNGSLSMSPENTLKCL 59
D IS+L IL HILSF+ + VW P + N +P
Sbjct: 31 DSISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVWCDTPSLSFNDYRLEAP------F 84
Query: 60 VKTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSN-- 117
+ L Y + +F L ++V + S +++A+ NV L L +N
Sbjct: 85 IDETLTRYTAS-KMMRFHLHTSLINNVPHLES---WIKFAMSRNVDHLSLDLWNQVANKF 140
Query: 118 -YPDSYY---NLPQL-VFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQVI 172
+PD ++ +L QL V S +++ + CL++L D+ +
Sbjct: 141 KFPDFFHINSSLKQLTVVLDFSDTMIAI---------------CLKKLYLSTCLLSDESM 185
Query: 173 KDLISGCPLIEFISIISCRGLKHLELPNLGKLKEFKVYDEYGLEQVYIQGMNAHSVHIIG 232
+++ GCP++E +++ C GL+ L+L +L+ ++ +++ + A +
Sbjct: 186 ANILFGCPILESLTLDHCGGLRVLDLSKSLRLRTLEINC-----NIWVPELTAMQI---- 236
Query: 233 LHMLPHISVVPCKNLKKLKLCQEIVDCMKLRSIKISSFCLKSF 275
+ PH C L+ KL +VD L+ K+ + C+ SF
Sbjct: 237 --VAPHTH---CLRLRNSKLPCSLVDVSSLKEAKL-NICIDSF 273
>sp|Q9FLA1|FDL35_ARATH Putative F-box/FBD/LRR-repeat protein At5g44960 OS=Arabidopsis
thaliana GN=At5g44960 PE=4 SV=2
Length = 436
Score = 38.1 bits (87), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 127 QLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQ---VIKDLISGCPLIE 183
Q ++ +K++ L L + +L++P V+L CL+ L+ +C + V++ LISGCP++E
Sbjct: 126 QNIYKSKTLVSLKLYNVELKNPDFVVSLPCLKILKLMKICYGEDGPLVVEKLISGCPVLE 185
Query: 184 FISII 188
+ +I
Sbjct: 186 DLELI 190
>sp|Q9LJF8|FBL47_ARATH F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana
GN=At3g26922 PE=2 SV=2
Length = 306
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 6 NPNAANGDMISALLAPILHHILSFLSIEQVWHSHPGVECNGSLSMSPENTLKCLVKTLL- 64
N N N D IS L +L ILS L ++ V S+ P +L LV TL
Sbjct: 7 NGNGVNEDRISDLPEALLLQILSMLPVKDV--------VTTSVLSKPWRSLWKLVPTLKF 58
Query: 65 ---NHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRY--------------AVETNVKEL 107
N+ +D + + + LS+ F+ S++ R+ A +V++L
Sbjct: 59 DYENNQSEDETYSEIVCRLLLSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDL 118
Query: 108 KLGFCCPHSNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCA 167
L H + P ++ +++ L L S L L LR LR +V
Sbjct: 119 VL-----HVESVKGSFIFPTGLYNCETLESLTLRSWVLVDVPSPACLKSLRTLRLENVDY 173
Query: 168 D-DQVIKDLISGCPLIEFISIISCRG-LKHLELPNLG--KLKEFKVYDEYGLEQVYIQGM 223
D + +L+SGCP +E +++ RG L +E + L+ +YD+ E +
Sbjct: 174 KYDDSVYNLLSGCPNLE--NLVVYRGNLLEVETFTIAVPSLQRLTIYDDNDGEYCTGYVI 231
Query: 224 NAHSVH 229
NA S+
Sbjct: 232 NAPSLK 237
>sp|Q9FF58|FBD30_ARATH FBD-associated F-box protein At5g60610 OS=Arabidopsis thaliana
GN=At5g60610 PE=2 SV=1
Length = 388
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 35/194 (18%)
Query: 13 DMISALLAPILHHILSFLSI-------------EQVWHSHPGVECNGSLSMSPENTLK-- 57
D IS L +L I+SF+ E +W P +EC+ + + LK
Sbjct: 2 DRISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPKLECDCTEPALRDFILKNL 61
Query: 58 CLVKTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSN 117
L ++ F E F F D+K I A+ ++EL++ F S+
Sbjct: 62 PLQARIIESLYLRFRRESFLF-----QDIKLWGGI------AISHCLRELRIDF---FSH 107
Query: 118 YPDSYYNLPQLVFYAKS---MSLLGLDSCKLESPRGNVTLSCLRELRPRHVC-ADDQVIK 173
Y + Y LP+ ++ KS + LLGL +++ PR +V L L+ L + V +++ ++
Sbjct: 108 YANPYVILPRSLYTCKSLVTLKLLGL-GIRVDVPR-DVCLPSLKTLLLQCVAYSEEDPLR 165
Query: 174 DLISGCPLIEFISI 187
L+S CP++E + I
Sbjct: 166 LLLSCCPVLEDLVI 179
>sp|Q9FLA3|FBD42_ARATH Putative FBD-associated F-box protein At5g44940 OS=Arabidopsis
thaliana GN=At5g44940 PE=4 SV=2
Length = 377
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 127 QLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQ---VIKDLISGCPLIE 183
Q ++ +K++ L L + +L++P V+L CL+ L+ ++ + V++ LISGCP++E
Sbjct: 128 QNIYKSKTLVSLKLYNVELKNPEFVVSLPCLKILKLENIFHGEDGPLVVEKLISGCPVLE 187
Query: 184 FISII 188
+ +I
Sbjct: 188 DLELI 192
>sp|Q9M1Q1|FB215_ARATH F-box protein At3g62230 OS=Arabidopsis thaliana GN=At3g62230 PE=1
SV=1
Length = 461
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 77 TFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPH-------SNYPDSYYNLPQLV 129
+F ++LS+ F + + +AV NVK L L P + LP+
Sbjct: 92 SFELRLSNSYAFEEGVTTLIEFAVSKNVKHLFLDLSEPRWVTNNDAAQLEPGLIKLPESF 151
Query: 130 FYAKSMSLLGLDSCKLESPR----GNVTLSCLRELRPRHVCADDQVIKDLISGCPLIEFI 185
+ S+ L L C+ E R G V R +R + A LI+ PL+E +
Sbjct: 152 YKITSLVTLKLFGCRFEPSRLAKPGMVKTMFFRWIRLEMLSA-------LIAKTPLLEIL 204
Query: 186 SIISC 190
+I +C
Sbjct: 205 NIKNC 209
>sp|O80741|FB351_ARATH Probable F-box protein At1g60180 OS=Arabidopsis thaliana
GN=At1g60180 PE=4 SV=1
Length = 322
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 148 PRGNVTLSCLRELRPRHVCADDQVIKDLISGCPLIEFISIISCRGLKHLELPNLGKLKEF 207
PR +V+ + L++L R D+ I ++SGCP++E +++ C L L+L +L+
Sbjct: 29 PRCSVSWTSLKKLSLRFCELSDECIAKILSGCPILESLTLSHCIYLTVLDLSKSLRLRTL 88
Query: 208 KV 209
++
Sbjct: 89 EI 90
>sp|Q9LJ48|FB191_ARATH Putative F-box protein At3g29830 OS=Arabidopsis thaliana
GN=At3g29830 PE=4 SV=1
Length = 463
Score = 35.0 bits (79), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 77 TFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPH-SNYPDSYYN------LPQLV 129
+F + L V F I + +++ VK+L L F P N D N LP L+
Sbjct: 90 SFEICLGFPVGFEVEIKSLIEFSISRQVKKLVLDFSSPFWDNTWDGLRNDDFVIELPALI 149
Query: 130 FYAKSMSLLGLDSCKLESPR-GNVTLSCLRELRPRHVCADDQVIKDLISGCPLIEFISII 188
+ +++ L + +C + R NV L L R + I+ L+S PL+E +SII
Sbjct: 150 YGLQTLESLTIYACMFDPSRFTNVGLRTLSIGWFRL-----EKIESLLSKFPLLESLSII 204
Query: 189 SC 190
SC
Sbjct: 205 SC 206
>sp|Q9LYZ4|FBL79_ARATH F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana
GN=At5g02910 PE=2 SV=1
Length = 458
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 32/213 (15%)
Query: 13 DMISALLAPILHHILSFLSIEQ-------------VWHSHPG--VECNGSLSMSPENTLK 57
D IS+L ILHHILS + + VW P ++C + S + TL
Sbjct: 11 DFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCRRADPNSIDKTLS 70
Query: 58 CLVKTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSN 117
FS K T + + + S+ C+ +A+ N ++L L +
Sbjct: 71 F------------FSAPKITSFHLHTTLLNRIDSVNGCIEFAISHNAEKLSL----ESRD 114
Query: 118 YPDSYYNLPQLVFYAKSMSLLGLDSCKLE-SPRGNVTLSCLRELRPRHVCADDQVIKDLI 176
Y Y P + S+ L +DS + PR V+ + L+ L + D+ ++
Sbjct: 115 YRVRNYKFPDFFYTNSSVKQLFVDSGSVHLIPRCTVSWTSLKNLSLSNCTLSDESFLKIL 174
Query: 177 SGCPLIEFISIISCRGLKHLELPNLGKLKEFKV 209
SG PL+E + ++ C L+L L+ ++
Sbjct: 175 SGSPLLESLELLYCAEYMCLDLSQSQHLRRLEI 207
>sp|Q9FFU7|FBL90_ARATH Putative F-box/LRR-repeat protein At5g54820 OS=Arabidopsis thaliana
GN=At5g54820 PE=4 SV=1
Length = 472
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 77 TFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCP--HSNYPDSY----YNLPQLVF 130
+F + S V F I + YAV T VK L + P SN SY Y LP+ V+
Sbjct: 93 SFEICFSHLVGFEDKIDALIEYAVSTRVKNLVVDLSNPSWRSNGDISYRHFMYTLPKSVY 152
Query: 131 YAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDLISGCPLIEFISIISC 190
++ L + CK + P V LR L V ++ + L+S P ++ +SI +C
Sbjct: 153 SLTTLESLKIYGCKFD-PSKFVNPVLLRSLSIGWVRLEN--LHSLLSKSPSLQSLSIKNC 209
Query: 191 RGLKHLELPNLGKLKEFKV 209
G+ + G+ +E +
Sbjct: 210 WGVDITSMA--GQFRELVI 226
>sp|P0C2G6|FBL71_ARATH Putative F-box/LRR-repeat protein At4g00320 OS=Arabidopsis thaliana
GN=At4g00320 PE=4 SV=1
Length = 507
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 41/208 (19%)
Query: 121 SYYNLPQLVFYAKSMSLLGL---DSCKLESPRGNVTLSCLRELRPRHVCADDQVIKDLIS 177
++Y LP +F +K++ L + D + + G+V+L L+ L +V D ++++ L+S
Sbjct: 142 TFYPLPSEIFVSKTLVRLKIQFQDGANV-NVEGDVSLPMLKTLHLDYVKMDTRMLQKLLS 200
Query: 178 GCPLIE------------------FISIISCRGLKHLE---LPNLGKLKEFK-----VYD 211
GC +E F+S +S R LK L+ N K K+FK +D
Sbjct: 201 GCHTLEELLLMNLIWKESSEPEPCFVS-VSVRTLKILKFSRFENFMKAKDFKPIVLLSFD 259
Query: 212 EYGLEQVYIQGMN--AHSVHIIGLHMLPHISVVPCKNLKKLKLCQEIVDCMKLRSIKISS 269
L VY++ ++ A + L S+ CK K+++ + + KL
Sbjct: 260 IPNL--VYLEYLDTIADKYEQVRFDSLVKASIGLCKTSKQIE--NDNNNVTKL----FMG 311
Query: 270 FCLKSFLFIGYDTLDELKLCTPNLSIFK 297
C + L++ DTL L C + +F+
Sbjct: 312 ICNVTILYLTEDTLKVLGCCRETMPVFE 339
>sp|Q9FM89|FDL38_ARATH F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana
GN=At5g56420 PE=2 SV=1
Length = 422
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 96 LRYAVETNVKELKLGFCCPHSNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLS 155
+R V+ V+EL + +C LP+ +F ++++L L++ LE V
Sbjct: 100 VRIGVDRFVRELSVSYCSGEEPI-----RLPKCLFTCSTLAVLKLENITLEDASCYV--- 151
Query: 156 CLRELRPRHVCA----DDQVIKDLISGCPLIEFISIISCRG 192
C + L+ H+ DDQ + +IS C +E + + C G
Sbjct: 152 CFQSLKTLHLLDVKYLDDQSLPRIISSCSSLEDLVVQRCPG 192
>sp|Q9C7M1|FBD2_ARATH Putative FBD-associated F-box protein At1g55030 OS=Arabidopsis
thaliana GN=At1g55030 PE=4 SV=1
Length = 422
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 6 NPNAANGDMISALLAPILHHILSFLS---------IEQVWHSH----PGVECNGSLS-MS 51
N A DMIS L P++ IL L + + W SH P +E + L +
Sbjct: 2 NNRGAVTDMISQLPEPLILQILGSLPTKVAITTSVLSKQWQSHWKMMPKLEFDSFLRRLD 61
Query: 52 PENTLKCLVKTLLNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGF 111
EN KCL L+H L+ F+ V+L D I + A+ NV++L L
Sbjct: 62 LENVTKCL----LSHKAP--VLQTFSLKVRL-DRRNNAVDIGCLIGIAMTRNVRKLVLEV 114
Query: 112 CCPHSNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHV-CADDQ 170
+ + P+ +++ +++ L L + +V L L+ L V DD+
Sbjct: 115 Y-----FHRGTFTFPRSLYHCETLETLELILNVVMDVPPSVYLKSLKTLYLLAVDFKDDE 169
Query: 171 VIKDLISGCP 180
+ +L+SGCP
Sbjct: 170 SVINLLSGCP 179
>sp|Q499T7|CP080_RAT UPF0468 protein C16orf80 homolog OS=Rattus norvegicus GN=Gtl3 PE=2
SV=1
Length = 164
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 76 FTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSNYPDSYYNLPQLVFYAKSM 135
FTF VQ+ DD K V +R Y T VK F C D +N Q+ F
Sbjct: 87 FTFEVQVLDD-KNVRRRFRASNYQSTTRVKP----FICTMPMRLDDGWN--QIQFNLSDF 139
Query: 136 SLLGLDSCKLESPRG 150
+ D CKL P+G
Sbjct: 140 TRRAYDPCKLSYPKG 154
>sp|Q9ZV93|FDL10_ARATH F-box/FBD/LRR-repeat protein At1g78750 OS=Arabidopsis thaliana
GN=At1g78750 PE=2 SV=1
Length = 458
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 120 DSY-YNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHV-CADDQVIKDLIS 177
D+Y + +P ++ +++ L LD L SP+ V+L L+EL V AD ++ LIS
Sbjct: 139 DNYEFEMPPTLYTCETLVYLTLDGLSLASPKF-VSLPSLKELHLSIVKFADHMALETLIS 197
Query: 178 GCPLIEFISI 187
CP++E ++I
Sbjct: 198 QCPVLENLNI 207
>sp|Q0P4D1|AMN1_DANRE Protein AMN1 homolog OS=Danio rerio GN=amn1 PE=2 SV=1
Length = 249
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 13/101 (12%)
Query: 169 DQVIKDLISGCPLIEFISIISCRGLKHLELPNLGKLKEFKVYDEYGLEQVYIQGMNAHSV 228
D I+ L C +E IS+ C L L LG + L +Y G
Sbjct: 121 DSGIQALARHCKCLEVISLRGCSALSDKALLELGGNCKM-------LHSIYFSGTEVTDQ 173
Query: 229 HIIGLHM------LPHISVVPCKNLKKLKLCQEIVDCMKLR 263
+IGL L + +V C+NL L + + +C +R
Sbjct: 174 GVIGLATGVCSCSLKELQMVRCRNLTDLAVTAVLTNCANIR 214
>sp|Q9ZR09|FDL25_ARATH Putative F-box/FBD/LRR-repeat protein At4g03220 OS=Arabidopsis
thaliana GN=At4g03220 PE=4 SV=1
Length = 498
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 26/170 (15%)
Query: 64 LNHYGDDFSLEKFTFIVQLSDDVKFVSSIYRCLRYAVETNVKELKLGFCCPHSNYPDSYY 123
L + D +L F V ++ +S+ +R AV V++L + Y+
Sbjct: 91 LRSHRDSNNLRSLRFRVPVT-----FTSLNSLIRLAVTHQVQDLDIEVTT------KDYF 139
Query: 124 NLPQLVFYAKSMSLLGLDSCKL-------ESPRGN----VTLSCLRELRPRHVCADDQVI 172
N P+ + ++++ L L S L S RG +LS R + C D
Sbjct: 140 NFPRWIVTSQNLRALTLKSANLGFRLPPSSSARGGFQKLTSLSLSRVILHNQPCLSDFFT 199
Query: 173 KDLISGCPLIEFISIISCRGLKHLELPNLGKLKEFKVYDEYGLEQVYIQG 222
PL+E +++ C GLK L++ + L+EF + + LE + + G
Sbjct: 200 DP---SFPLLEKLTLECCFGLKELKV-SCRLLQEFSLKNSLQLEGLEVSG 245
>sp|Q9FL99|FDL36_ARATH F-box/FBD/LRR-repeat protein At5g44980 OS=Arabidopsis thaliana
GN=At5g44980 PE=2 SV=1
Length = 435
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 127 QLVFYAKSMSLLGLDSCKLESPRGNVTLSCLRELRPRHVCADDQ---VIKDLISGCPLIE 183
Q ++ +K++ L L + +L++ V+L CL+ L+ ++C + V++ LISGC ++E
Sbjct: 125 QNIYKSKTLVSLKLHNVELKNSDFVVSLPCLKILKLENICHGEDGPLVVEKLISGCSVLE 184
Query: 184 FISII 188
+ +I
Sbjct: 185 DLELI 189
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 249 KLKLCQEIVDCMKLRSIKISSFCLKSFLFIGY-----DTLDELKLCTPNLSIFKYHGDLI 303
KL+L +++ + MK R++ + L S+ +GY LDE+++C I ++ L
Sbjct: 139 KLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLS 198
Query: 304 SFSSTALALSEIALV 318
++S L+ IA++
Sbjct: 199 GYASKGLSKDAIAVL 213
>sp|Q9FM94|FBD21_ARATH FBD-associated F-box protein At5g56370 OS=Arabidopsis thaliana
GN=At5g56370 PE=2 SV=1
Length = 421
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 96 LRYAVETNVKELKLGFCCPHSNYPDSYYNLPQLVFYAKSMSLLGLDSCKLESPRGNVTLS 155
+R AVE + EL + +Y LPQ +F ++++L L + L+ + V
Sbjct: 94 VRIAVEKGLCELDFDY----EHYKTEPCRLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFK 149
Query: 156 CLRELRPRHVC-ADDQVIKDLISGCPLIEFISI 187
L+ L +V D + + L+S CP++E +
Sbjct: 150 LLKTLHLEYVIFLDKETPQKLLSSCPILEVFDL 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,126,241
Number of Sequences: 539616
Number of extensions: 5896649
Number of successful extensions: 14823
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 14794
Number of HSP's gapped (non-prelim): 54
length of query: 377
length of database: 191,569,459
effective HSP length: 119
effective length of query: 258
effective length of database: 127,355,155
effective search space: 32857629990
effective search space used: 32857629990
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)