Query 042963
Match_columns 171
No_of_seqs 175 out of 2372
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 20:02:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hem_A Cyclopropane-fatty-acyl 99.9 3.2E-27 1.1E-31 190.3 16.0 152 2-154 59-302 (302)
2 1kpg_A CFA synthase;, cyclopro 99.9 4.1E-24 1.4E-28 170.5 14.5 152 2-154 51-287 (287)
3 2fk8_A Methoxy mycolic acid sy 99.9 2.9E-23 9.9E-28 168.1 17.0 156 2-158 77-317 (318)
4 2o57_A Putative sarcosine dime 99.7 3.7E-16 1.3E-20 124.8 17.0 152 2-157 65-296 (297)
5 3bus_A REBM, methyltransferase 99.7 4.7E-16 1.6E-20 122.5 14.5 150 2-155 48-273 (273)
6 3vc1_A Geranyl diphosphate 2-C 99.6 1.3E-14 4.4E-19 117.1 12.0 147 4-154 105-311 (312)
7 3ujc_A Phosphoethanolamine N-m 99.6 2.7E-14 9.3E-19 111.5 10.9 143 3-155 43-266 (266)
8 4htf_A S-adenosylmethionine-de 99.5 5.7E-14 1.9E-18 111.6 10.6 156 3-159 57-283 (285)
9 3bkx_A SAM-dependent methyltra 99.5 7.9E-14 2.7E-18 109.8 10.7 147 2-153 30-274 (275)
10 3iv6_A Putative Zn-dependent a 99.5 5E-14 1.7E-18 112.1 8.2 108 2-111 32-212 (261)
11 3kkz_A Uncharacterized protein 99.5 3.3E-14 1.1E-18 112.0 5.7 104 4-112 34-188 (267)
12 1nkv_A Hypothetical protein YJ 99.4 1.8E-12 6.1E-17 100.9 11.2 105 3-112 24-179 (256)
13 1dl5_A Protein-L-isoaspartate 99.4 1.8E-13 6.1E-18 111.1 3.9 109 2-110 62-219 (317)
14 1vl5_A Unknown conserved prote 99.3 2.6E-12 9E-17 100.5 8.7 109 2-112 24-182 (260)
15 3f4k_A Putative methyltransfer 99.3 5.4E-12 1.8E-16 98.2 9.3 104 4-112 34-188 (257)
16 4gek_A TRNA (CMO5U34)-methyltr 99.3 3.1E-12 1.1E-16 101.5 7.0 61 13-73 68-182 (261)
17 3dh0_A SAM dependent methyltra 99.3 2.3E-11 7.8E-16 92.5 10.9 96 4-112 26-173 (219)
18 3orh_A Guanidinoacetate N-meth 99.3 4.4E-12 1.5E-16 98.8 5.0 64 6-69 51-170 (236)
19 1xxl_A YCGJ protein; structura 99.2 2.8E-11 9.7E-16 93.8 9.0 107 4-112 10-166 (239)
20 3ocj_A Putative exported prote 99.2 2.4E-11 8.2E-16 97.6 8.9 103 10-112 113-283 (305)
21 3hnr_A Probable methyltransfer 99.2 1.3E-11 4.4E-16 94.0 6.8 107 3-112 33-193 (220)
22 1pjz_A Thiopurine S-methyltran 99.2 1.3E-11 4.4E-16 93.9 6.6 95 3-112 10-168 (203)
23 3fpf_A Mtnas, putative unchara 99.2 3.9E-11 1.3E-15 96.9 9.3 62 8-69 115-222 (298)
24 3dli_A Methyltransferase; PSI- 99.2 6.4E-11 2.2E-15 91.6 8.6 92 13-112 39-176 (240)
25 3e05_A Precorrin-6Y C5,15-meth 99.2 1.2E-10 4E-15 88.0 9.4 65 5-69 30-142 (204)
26 3ou2_A SAM-dependent methyltra 99.2 6.9E-11 2.4E-15 89.4 7.9 108 4-112 34-197 (218)
27 3dlc_A Putative S-adenosyl-L-m 99.2 1.6E-11 5.6E-16 92.7 4.4 67 4-71 33-150 (219)
28 3dtn_A Putative methyltransfer 99.2 7.6E-11 2.6E-15 90.5 7.9 70 5-74 33-153 (234)
29 3p2e_A 16S rRNA methylase; met 99.2 3.3E-12 1.1E-16 99.1 0.1 57 12-68 21-138 (225)
30 3g2m_A PCZA361.24; SAM-depende 99.2 7.8E-11 2.7E-15 94.2 8.1 69 3-72 71-193 (299)
31 2p7i_A Hypothetical protein; p 99.1 5.7E-11 1.9E-15 91.3 6.8 108 4-112 30-191 (250)
32 4e2x_A TCAB9; kijanose, tetron 99.1 4.8E-11 1.6E-15 99.7 6.6 105 2-112 94-245 (416)
33 4df3_A Fibrillarin-like rRNA/T 99.1 2E-11 7E-16 95.5 4.1 61 9-69 71-182 (233)
34 3mti_A RRNA methylase; SAM-dep 99.1 7.2E-11 2.5E-15 87.7 6.9 63 9-71 16-137 (185)
35 3lbf_A Protein-L-isoaspartate 99.1 4E-11 1.4E-15 90.8 5.4 96 3-99 65-204 (210)
36 3njr_A Precorrin-6Y methylase; 99.1 1.9E-10 6.4E-15 87.6 9.1 66 5-70 45-155 (204)
37 3lcc_A Putative methyl chlorid 99.1 2.4E-10 8.4E-15 87.9 9.5 93 4-112 56-199 (235)
38 3mgg_A Methyltransferase; NYSG 99.1 1.5E-10 5.2E-15 91.0 7.6 104 9-112 31-190 (276)
39 3e8s_A Putative SAM dependent 99.1 2.7E-10 9.2E-15 86.4 8.5 106 5-112 42-201 (227)
40 2a14_A Indolethylamine N-methy 99.1 1.8E-10 6E-15 90.8 7.6 91 12-112 52-230 (263)
41 3jwg_A HEN1, methyltransferase 99.1 4.5E-10 1.5E-14 85.5 9.2 66 3-68 17-140 (219)
42 3hm2_A Precorrin-6Y C5,15-meth 99.1 3.3E-10 1.1E-14 83.1 8.2 67 4-70 14-128 (178)
43 1xtp_A LMAJ004091AAA; SGPP, st 99.1 2.9E-10 1E-14 88.1 8.3 99 4-112 82-230 (254)
44 3l8d_A Methyltransferase; stru 99.1 4.1E-10 1.4E-14 86.6 8.9 95 13-112 51-192 (242)
45 3ccf_A Cyclopropane-fatty-acyl 99.1 1.3E-10 4.5E-15 91.8 6.1 107 5-112 47-202 (279)
46 3g5l_A Putative S-adenosylmeth 99.1 1.6E-10 5.6E-15 89.7 6.3 65 5-69 34-145 (253)
47 2r3s_A Uncharacterized protein 99.1 7.2E-10 2.5E-14 89.6 10.1 108 4-112 152-315 (335)
48 3dxy_A TRNA (guanine-N(7)-)-me 99.1 3.8E-10 1.3E-14 87.0 8.0 47 2-48 7-83 (218)
49 2aot_A HMT, histamine N-methyl 99.1 2.3E-10 7.8E-15 91.3 7.0 100 6-112 42-213 (292)
50 3e23_A Uncharacterized protein 99.1 9.6E-10 3.3E-14 83.1 9.9 97 4-113 34-175 (211)
51 3gwz_A MMCR; methyltransferase 99.1 9.1E-10 3.1E-14 90.9 10.3 104 4-112 191-348 (369)
52 2ld4_A Anamorsin; methyltransf 99.0 1.3E-10 4.4E-15 85.8 4.1 127 8-156 5-169 (176)
53 3jwh_A HEN1; methyltransferase 99.0 3.8E-10 1.3E-14 85.8 6.9 66 3-68 17-140 (217)
54 2yqz_A Hypothetical protein TT 99.0 1.5E-10 5.1E-15 90.0 4.7 107 5-112 24-188 (263)
55 2p35_A Trans-aconitate 2-methy 99.0 4.6E-10 1.6E-14 87.1 7.5 110 3-112 21-182 (259)
56 2p8j_A S-adenosylmethionine-de 99.0 5.3E-10 1.8E-14 84.1 7.1 71 4-74 11-133 (209)
57 3i9f_A Putative type 11 methyl 99.0 2.7E-10 9.1E-15 83.3 5.2 71 3-73 5-116 (170)
58 2xvm_A Tellurite resistance pr 99.0 1.2E-09 4.1E-14 81.3 8.8 67 5-71 22-138 (199)
59 3sm3_A SAM-dependent methyltra 99.0 3.7E-10 1.3E-14 86.1 5.9 61 13-73 28-145 (235)
60 3uwp_A Histone-lysine N-methyl 99.0 1.3E-09 4.3E-14 91.8 9.5 71 3-73 161-292 (438)
61 3eey_A Putative rRNA methylase 99.0 6.5E-10 2.2E-14 83.2 7.1 69 3-71 10-141 (197)
62 1qzz_A RDMB, aclacinomycin-10- 99.0 6.9E-10 2.4E-14 91.2 7.8 105 4-112 171-331 (374)
63 2ex4_A Adrenal gland protein A 99.0 5.8E-10 2E-14 86.2 6.9 89 13-112 77-217 (241)
64 1x19_A CRTF-related protein; m 99.0 2.3E-09 7.8E-14 87.9 10.7 104 4-112 179-340 (359)
65 3mcz_A O-methyltransferase; ad 99.0 1.2E-09 4.2E-14 89.0 9.1 106 4-112 167-331 (352)
66 2yxe_A Protein-L-isoaspartate 99.0 3.9E-10 1.3E-14 85.6 5.6 97 3-100 65-208 (215)
67 2gb4_A Thiopurine S-methyltran 99.0 4.4E-10 1.5E-14 88.6 6.0 85 11-109 64-217 (252)
68 1wzn_A SAM-dependent methyltra 99.0 1.2E-09 4.2E-14 84.6 8.3 66 4-69 30-145 (252)
69 2kw5_A SLR1183 protein; struct 99.0 2.8E-09 9.5E-14 80.0 9.9 93 4-108 21-161 (202)
70 2vdw_A Vaccinia virus capping 99.0 1.4E-09 4.9E-14 87.8 8.8 58 14-71 47-171 (302)
71 3i53_A O-methyltransferase; CO 99.0 8.9E-10 3.1E-14 89.3 7.3 102 6-112 160-313 (332)
72 3ege_A Putative methyltransfer 99.0 2.3E-10 8E-15 89.7 3.7 100 4-112 23-170 (261)
73 2g72_A Phenylethanolamine N-me 99.0 1.6E-09 5.5E-14 86.1 8.6 40 4-43 58-114 (289)
74 4fsd_A Arsenic methyltransfera 99.0 1.6E-09 5.4E-14 89.9 8.6 97 13-112 81-243 (383)
75 3h2b_A SAM-dependent methyltra 99.0 5.7E-10 2E-14 83.8 5.3 88 15-112 41-174 (203)
76 2esr_A Methyltransferase; stru 99.0 3.1E-09 1.1E-13 78.2 8.9 69 4-72 19-141 (177)
77 1tw3_A COMT, carminomycin 4-O- 99.0 1.6E-09 5.4E-14 88.6 7.9 103 5-111 173-330 (360)
78 3dr5_A Putative O-methyltransf 98.9 2E-09 7E-14 83.0 8.0 69 4-72 45-166 (221)
79 1dus_A MJ0882; hypothetical pr 98.9 3.1E-09 1E-13 78.4 8.6 69 3-71 40-159 (194)
80 2i62_A Nicotinamide N-methyltr 98.9 2.1E-09 7.3E-14 83.5 8.1 96 6-112 48-231 (265)
81 3mb5_A SAM-dependent methyltra 98.9 2.1E-09 7.3E-14 83.6 8.1 67 3-69 81-194 (255)
82 1zx0_A Guanidinoacetate N-meth 98.9 5.6E-10 1.9E-14 86.2 4.6 39 7-45 52-105 (236)
83 3opn_A Putative hemolysin; str 98.9 2.4E-10 8.2E-15 89.1 2.4 66 3-68 24-136 (232)
84 3p9n_A Possible methyltransfer 98.9 6E-09 2E-13 77.7 9.8 59 14-72 43-156 (189)
85 3ggd_A SAM-dependent methyltra 98.9 9.4E-10 3.2E-14 85.0 5.5 62 12-73 53-167 (245)
86 1vbf_A 231AA long hypothetical 98.9 1E-09 3.5E-14 84.1 5.6 70 3-72 58-168 (231)
87 3tfw_A Putative O-methyltransf 98.9 2.2E-09 7.6E-14 83.9 7.6 67 6-72 53-173 (248)
88 3gu3_A Methyltransferase; alph 98.9 2.7E-09 9.3E-14 84.7 7.9 68 4-71 10-128 (284)
89 3g5t_A Trans-aconitate 3-methy 98.9 1.9E-09 6.4E-14 86.0 7.0 107 4-112 25-196 (299)
90 3grz_A L11 mtase, ribosomal pr 98.9 1E-09 3.5E-14 82.7 5.1 65 6-70 49-160 (205)
91 1jg1_A PIMT;, protein-L-isoasp 98.9 7.4E-10 2.5E-14 85.6 4.3 97 3-99 79-221 (235)
92 3pfg_A N-methyltransferase; N, 98.9 2.2E-09 7.6E-14 83.8 7.1 61 13-73 48-155 (263)
93 4hg2_A Methyltransferase type 98.9 6.6E-10 2.2E-14 87.9 3.9 63 5-72 31-138 (257)
94 3m70_A Tellurite resistance pr 98.9 2.4E-09 8.3E-14 84.7 6.9 67 5-71 110-225 (286)
95 1u2z_A Histone-lysine N-methyl 98.9 6.2E-09 2.1E-13 88.1 9.6 68 3-70 230-360 (433)
96 1l3i_A Precorrin-6Y methyltran 98.9 5.7E-09 1.9E-13 76.9 8.2 65 5-69 23-134 (192)
97 3dp7_A SAM-dependent methyltra 98.9 6.2E-09 2.1E-13 85.7 9.2 105 7-112 171-334 (363)
98 3bkw_A MLL3908 protein, S-aden 98.9 1.8E-09 6.3E-14 82.9 5.6 65 5-69 33-144 (243)
99 2gs9_A Hypothetical protein TT 98.9 4.1E-09 1.4E-13 79.5 7.3 102 5-108 27-170 (211)
100 1nt2_A Fibrillarin-like PRE-rR 98.9 4.7E-09 1.6E-13 80.3 7.7 58 11-68 53-160 (210)
101 2ip2_A Probable phenazine-spec 98.9 5.2E-09 1.8E-13 84.7 8.0 105 4-111 157-313 (334)
102 3ofk_A Nodulation protein S; N 98.9 3.2E-09 1.1E-13 80.4 6.4 66 4-69 39-154 (216)
103 3duw_A OMT, O-methyltransferas 98.9 5.5E-09 1.9E-13 79.7 7.5 67 6-72 48-170 (223)
104 3u81_A Catechol O-methyltransf 98.9 4.8E-09 1.6E-13 80.3 7.0 64 8-72 51-173 (221)
105 3ntv_A MW1564 protein; rossman 98.8 4E-09 1.4E-13 81.5 6.5 66 6-71 62-178 (232)
106 1ri5_A MRNA capping enzyme; me 98.8 5.6E-09 1.9E-13 82.4 7.5 65 7-71 56-176 (298)
107 1xdz_A Methyltransferase GIDB; 98.8 4.5E-09 1.5E-13 81.5 6.7 57 12-68 67-173 (240)
108 2fca_A TRNA (guanine-N(7)-)-me 98.8 7E-09 2.4E-13 79.3 7.4 35 14-48 37-87 (213)
109 2y1w_A Histone-arginine methyl 98.8 2.1E-09 7.3E-14 88.2 4.8 99 5-104 40-196 (348)
110 1yb2_A Hypothetical protein TA 98.8 4.4E-09 1.5E-13 83.2 6.4 65 5-69 100-211 (275)
111 2fhp_A Methylase, putative; al 98.8 1.3E-08 4.3E-13 75.1 8.1 68 4-71 32-156 (187)
112 3mq2_A 16S rRNA methyltransfer 98.8 1.3E-09 4.3E-14 83.0 2.7 64 5-68 17-139 (218)
113 4dcm_A Ribosomal RNA large sub 98.8 1.1E-08 3.7E-13 85.0 8.4 65 5-69 212-334 (375)
114 3thr_A Glycine N-methyltransfe 98.8 5.9E-09 2E-13 82.6 6.4 65 5-69 47-175 (293)
115 1i9g_A Hypothetical protein RV 98.8 1.1E-08 3.8E-13 80.5 7.9 66 4-69 88-203 (280)
116 1i1n_A Protein-L-isoaspartate 98.8 9.9E-09 3.4E-13 78.4 7.3 67 4-70 64-183 (226)
117 1jsx_A Glucose-inhibited divis 98.8 5.2E-09 1.8E-13 78.7 5.7 65 5-69 52-165 (207)
118 2yvl_A TRMI protein, hypotheti 98.8 1.7E-08 5.9E-13 77.8 8.5 66 4-69 80-190 (248)
119 3cc8_A Putative methyltransfer 98.8 1.1E-08 3.7E-13 77.5 7.1 107 5-112 23-177 (230)
120 3tr6_A O-methyltransferase; ce 98.8 8.3E-09 2.8E-13 78.7 6.3 62 11-72 60-177 (225)
121 3g89_A Ribosomal RNA small sub 98.8 1E-08 3.5E-13 80.5 7.0 56 13-68 78-183 (249)
122 2pwy_A TRNA (adenine-N(1)-)-me 98.8 1.3E-08 4.5E-13 78.9 7.5 66 4-69 85-198 (258)
123 3cgg_A SAM-dependent methyltra 98.8 1.6E-08 5.4E-13 74.6 7.5 83 6-112 38-167 (195)
124 2gpy_A O-methyltransferase; st 98.8 1.1E-08 3.7E-13 78.7 6.8 68 5-72 44-163 (233)
125 3hp7_A Hemolysin, putative; st 98.8 2E-09 6.8E-14 86.7 2.6 66 3-68 72-184 (291)
126 3lst_A CALO1 methyltransferase 98.8 8.3E-09 2.8E-13 84.3 6.3 103 4-112 173-328 (348)
127 1o54_A SAM-dependent O-methylt 98.8 1.7E-08 5.8E-13 79.8 7.8 66 4-69 101-213 (277)
128 2frn_A Hypothetical protein PH 98.8 7.9E-09 2.7E-13 82.2 5.7 59 13-71 123-227 (278)
129 2nxc_A L11 mtase, ribosomal pr 98.8 1.6E-08 5.5E-13 79.3 7.4 63 7-70 113-219 (254)
130 1y8c_A S-adenosylmethionine-de 98.8 1.9E-08 6.5E-13 77.0 7.6 56 14-69 36-142 (246)
131 1ve3_A Hypothetical protein PH 98.7 2.1E-08 7.3E-13 76.1 7.5 59 13-71 36-144 (227)
132 1r18_A Protein-L-isoaspartate( 98.7 9.3E-09 3.2E-13 78.8 5.4 67 4-70 71-195 (227)
133 2vdv_E TRNA (guanine-N(7)-)-me 98.7 1.5E-08 5.3E-13 78.8 6.6 34 13-46 47-96 (246)
134 4a6d_A Hydroxyindole O-methylt 98.7 2.3E-08 7.8E-13 82.1 7.9 105 5-112 169-326 (353)
135 2ipx_A RRNA 2'-O-methyltransfe 98.7 1.2E-08 4.1E-13 78.6 5.6 61 8-68 70-181 (233)
136 3c3p_A Methyltransferase; NP_9 98.7 2.4E-08 8.3E-13 75.5 7.3 60 12-71 53-162 (210)
137 3bxo_A N,N-dimethyltransferase 98.7 1.6E-08 5.6E-13 77.3 6.4 60 14-73 39-145 (239)
138 2yxd_A Probable cobalt-precorr 98.7 6E-08 2.1E-12 70.8 9.1 45 4-48 24-82 (183)
139 3id6_C Fibrillarin-like rRNA/T 98.7 1.1E-08 3.9E-13 79.7 5.4 58 11-68 72-180 (232)
140 3lpm_A Putative methyltransfer 98.7 2.8E-08 9.6E-13 77.8 7.5 42 7-48 40-97 (259)
141 2pjd_A Ribosomal RNA small sub 98.7 1.2E-08 4E-13 83.5 5.4 66 4-69 185-303 (343)
142 2fpo_A Methylase YHHF; structu 98.7 1.5E-08 5.1E-13 76.7 5.6 66 6-71 44-162 (202)
143 2b25_A Hypothetical protein; s 98.7 2.2E-08 7.7E-13 81.3 6.9 67 4-70 94-220 (336)
144 1ixk_A Methyltransferase; open 98.7 3E-08 1E-12 80.3 7.6 42 7-48 110-168 (315)
145 1vlm_A SAM-dependent methyltra 98.7 4.1E-08 1.4E-12 74.7 8.0 96 15-112 47-180 (219)
146 1ws6_A Methyltransferase; stru 98.7 2.6E-08 9.1E-13 72.2 6.6 68 5-72 29-150 (171)
147 2avn_A Ubiquinone/menaquinone 98.7 2.2E-08 7.4E-13 78.3 6.4 66 5-71 45-154 (260)
148 3b3j_A Histone-arginine methyl 98.7 7.6E-09 2.6E-13 88.6 4.1 99 5-104 148-304 (480)
149 3g07_A 7SK snRNA methylphospha 98.7 5.5E-09 1.9E-13 83.5 3.0 30 15-44 46-91 (292)
150 2ift_A Putative methylase HI07 98.7 1.9E-08 6.4E-13 76.1 5.8 43 6-48 43-101 (201)
151 3ckk_A TRNA (guanine-N(7)-)-me 98.7 2E-08 6.8E-13 78.2 6.1 34 12-45 43-92 (235)
152 1yzh_A TRNA (guanine-N(7)-)-me 98.7 4E-08 1.4E-12 74.6 7.7 35 14-48 40-90 (214)
153 3reo_A (ISO)eugenol O-methyltr 98.7 1.8E-08 6.1E-13 83.2 6.1 104 5-112 192-347 (368)
154 1fbn_A MJ fibrillarin homologu 98.7 1.5E-08 5.3E-13 77.9 5.2 64 5-68 61-177 (230)
155 3d2l_A SAM-dependent methyltra 98.7 3.2E-08 1.1E-12 75.8 6.8 57 13-69 31-137 (243)
156 3tma_A Methyltransferase; thum 98.7 6E-08 2.1E-12 79.4 8.8 65 5-69 193-317 (354)
157 2qe6_A Uncharacterized protein 98.7 6E-08 2.1E-12 77.0 8.5 101 4-107 65-231 (274)
158 2pbf_A Protein-L-isoaspartate 98.7 1.9E-08 6.5E-13 76.8 5.0 67 5-71 68-195 (227)
159 3evz_A Methyltransferase; NYSG 98.7 6.6E-08 2.3E-12 73.8 7.9 42 6-47 46-103 (230)
160 3fzg_A 16S rRNA methylase; met 98.7 3.8E-08 1.3E-12 74.8 6.3 56 14-69 48-152 (200)
161 3r0q_C Probable protein argini 98.7 2.2E-08 7.4E-13 83.0 5.4 63 6-69 54-169 (376)
162 1sui_A Caffeoyl-COA O-methyltr 98.7 4.9E-08 1.7E-12 76.4 7.2 61 11-71 75-192 (247)
163 3r3h_A O-methyltransferase, SA 98.7 5.3E-09 1.8E-13 81.7 1.6 63 11-73 56-174 (242)
164 2fyt_A Protein arginine N-meth 98.6 3.1E-08 1.1E-12 81.0 6.0 61 5-66 54-168 (340)
165 3dmg_A Probable ribosomal RNA 98.6 5.7E-08 1.9E-12 80.9 7.6 57 13-69 231-340 (381)
166 2pxx_A Uncharacterized protein 98.6 4.6E-08 1.6E-12 73.4 6.5 67 5-72 33-162 (215)
167 1g8a_A Fibrillarin-like PRE-rR 98.6 3.1E-08 1.1E-12 75.7 5.3 61 8-68 66-177 (227)
168 3m4x_A NOL1/NOP2/SUN family pr 98.6 6.7E-08 2.3E-12 82.3 7.8 68 6-73 96-238 (456)
169 3p9c_A Caffeic acid O-methyltr 98.6 4.8E-08 1.6E-12 80.5 6.6 105 4-112 189-345 (364)
170 4dzr_A Protein-(glutamine-N5) 98.6 2.9E-08 9.8E-13 74.4 4.8 44 4-47 18-78 (215)
171 3bgv_A MRNA CAP guanine-N7 met 98.6 5.1E-08 1.7E-12 78.2 6.3 67 5-71 22-157 (313)
172 3m6w_A RRNA methylase; rRNA me 98.6 8.4E-08 2.9E-12 81.8 7.9 67 6-72 92-232 (464)
173 3cbg_A O-methyltransferase; cy 98.6 6.8E-08 2.3E-12 74.6 6.7 61 11-71 68-184 (232)
174 3q7e_A Protein arginine N-meth 98.6 2.2E-08 7.4E-13 82.2 4.1 56 11-67 62-171 (349)
175 3kr9_A SAM-dependent methyltra 98.6 9.5E-08 3.2E-12 74.2 7.3 59 13-71 13-121 (225)
176 3c3y_A Pfomt, O-methyltransfer 98.6 9.2E-08 3.1E-12 74.2 7.1 61 11-71 66-183 (237)
177 3ajd_A Putative methyltransfer 98.6 1.2E-07 4E-12 75.2 7.7 42 7-48 75-133 (274)
178 2b3t_A Protein methyltransfera 98.6 1.5E-07 5E-12 74.4 8.2 44 4-48 99-158 (276)
179 1p91_A Ribosomal RNA large sub 98.6 4.6E-08 1.6E-12 76.5 5.1 58 14-71 84-180 (269)
180 2avd_A Catechol-O-methyltransf 98.6 9.7E-08 3.3E-12 72.8 6.6 63 9-71 63-181 (229)
181 3a27_A TYW2, uncharacterized p 98.6 1.1E-07 3.7E-12 75.4 7.1 63 10-72 114-222 (272)
182 2hnk_A SAM-dependent O-methylt 98.6 9E-08 3.1E-12 73.9 6.3 67 5-71 50-183 (239)
183 3lec_A NADB-rossmann superfami 98.6 1.6E-07 5.4E-12 73.2 7.3 60 13-72 19-128 (230)
184 3m33_A Uncharacterized protein 98.6 5E-08 1.7E-12 74.7 4.4 54 13-66 46-139 (226)
185 1fp1_D Isoliquiritigenin 2'-O- 98.5 3.4E-08 1.2E-12 81.4 3.6 105 4-112 197-352 (372)
186 3giw_A Protein of unknown func 98.5 9.6E-08 3.3E-12 76.3 6.0 104 3-108 65-237 (277)
187 3gnl_A Uncharacterized protein 98.5 2E-07 7E-12 73.2 7.3 60 13-72 19-128 (244)
188 2igt_A SAM dependent methyltra 98.5 2.9E-07 1E-11 75.1 8.5 42 6-47 143-199 (332)
189 1g6q_1 HnRNP arginine N-methyl 98.5 7.6E-08 2.6E-12 78.2 4.9 60 7-67 30-143 (328)
190 2frx_A Hypothetical protein YE 98.5 2.1E-07 7.1E-12 79.6 7.8 41 8-48 108-167 (479)
191 3htx_A HEN1; HEN1, small RNA m 98.5 2.2E-07 7.6E-12 83.9 7.9 67 3-70 709-835 (950)
192 4dmg_A Putative uncharacterize 98.5 3.5E-07 1.2E-11 76.4 8.3 36 13-48 212-261 (393)
193 3adn_A Spermidine synthase; am 98.4 2E-07 7E-12 74.9 5.7 56 14-69 82-198 (294)
194 3gdh_A Trimethylguanosine synt 98.4 1.1E-08 3.9E-13 78.8 -1.7 36 13-48 76-125 (241)
195 2ozv_A Hypothetical protein AT 98.4 2.3E-07 7.8E-12 72.9 5.6 39 7-45 28-82 (260)
196 1nv8_A HEMK protein; class I a 98.4 2.6E-07 9E-12 73.7 6.0 45 4-48 112-171 (284)
197 2zfu_A Nucleomethylin, cerebra 98.4 3.1E-07 1.1E-11 69.3 5.9 85 5-112 56-171 (215)
198 4hc4_A Protein arginine N-meth 98.4 1.2E-07 4.2E-12 78.8 3.7 56 11-67 79-187 (376)
199 2yxl_A PH0851 protein, 450AA l 98.4 5.7E-07 2E-11 76.1 7.9 42 7-48 251-309 (450)
200 3k6r_A Putative transferase PH 98.4 3.2E-07 1.1E-11 73.3 5.7 59 13-71 123-227 (278)
201 2o07_A Spermidine synthase; st 98.4 6E-07 2.1E-11 72.4 6.8 59 12-70 92-210 (304)
202 1xj5_A Spermidine synthase 1; 98.4 7.8E-07 2.7E-11 72.8 7.3 57 12-68 117-234 (334)
203 3bwc_A Spermidine synthase; SA 98.4 4.2E-07 1.4E-11 73.2 5.5 58 12-69 92-210 (304)
204 3dou_A Ribosomal RNA large sub 98.4 8.9E-07 3E-11 66.6 6.9 32 3-34 12-58 (191)
205 1sqg_A SUN protein, FMU protei 98.4 6.1E-07 2.1E-11 75.5 6.6 42 6-47 237-294 (429)
206 1o9g_A RRNA methyltransferase; 98.3 1.5E-06 5.1E-11 67.4 8.2 40 4-43 40-97 (250)
207 3bzb_A Uncharacterized protein 98.3 1.3E-06 4.5E-11 69.3 7.9 39 5-43 69-123 (281)
208 2as0_A Hypothetical protein PH 98.3 1.7E-06 5.9E-11 71.8 8.5 35 14-48 216-265 (396)
209 1wxx_A TT1595, hypothetical pr 98.3 9.2E-07 3.1E-11 73.2 6.8 34 15-48 209-256 (382)
210 4azs_A Methyltransferase WBDD; 98.3 1.4E-06 4.6E-11 75.9 7.3 61 14-74 65-178 (569)
211 3c0k_A UPF0064 protein YCCW; P 98.3 2.5E-06 8.6E-11 70.9 8.6 35 14-48 219-268 (396)
212 1fp2_A Isoflavone O-methyltran 98.3 3.8E-07 1.3E-11 74.4 3.6 103 8-112 179-333 (352)
213 2i7c_A Spermidine synthase; tr 98.3 1.9E-06 6.3E-11 68.7 7.1 60 11-70 74-193 (283)
214 2b78_A Hypothetical protein SM 98.3 2.4E-06 8.2E-11 71.0 8.0 35 14-48 211-260 (385)
215 1iy9_A Spermidine synthase; ro 98.3 1.4E-06 4.9E-11 69.1 6.4 56 14-69 74-189 (275)
216 1inl_A Spermidine synthase; be 98.2 1.6E-06 5.5E-11 69.5 6.2 56 14-69 89-205 (296)
217 2b2c_A Spermidine synthase; be 98.2 1.3E-06 4.3E-11 70.9 5.7 57 13-69 106-222 (314)
218 2pt6_A Spermidine synthase; tr 98.2 1.3E-06 4.4E-11 71.0 5.5 57 13-69 114-230 (321)
219 3v97_A Ribosomal RNA large sub 98.2 2.4E-06 8.3E-11 76.2 7.6 56 14-69 538-657 (703)
220 2bm8_A Cephalosporin hydroxyla 98.2 3.3E-07 1.1E-11 71.1 1.3 64 7-70 73-188 (236)
221 3lcv_B Sisomicin-gentamicin re 98.2 4.2E-06 1.4E-10 66.4 7.3 55 14-69 131-236 (281)
222 3gjy_A Spermidine synthase; AP 98.2 1.6E-06 5.4E-11 70.6 4.8 56 17-72 91-203 (317)
223 1uir_A Polyamine aminopropyltr 98.2 2.9E-06 9.9E-11 68.6 6.3 58 13-70 75-196 (314)
224 1mjf_A Spermidine synthase; sp 98.1 2.4E-06 8.1E-11 68.0 5.5 56 13-69 73-193 (281)
225 1zg3_A Isoflavanone 4'-O-methy 98.1 5.2E-07 1.8E-11 73.8 1.4 102 6-112 182-339 (358)
226 2yx1_A Hypothetical protein MJ 98.1 3E-06 1E-10 69.1 5.8 60 13-72 193-294 (336)
227 2plw_A Ribosomal RNA methyltra 98.1 4.8E-06 1.6E-10 62.0 6.1 32 3-34 9-59 (201)
228 1uwv_A 23S rRNA (uracil-5-)-me 98.1 1E-05 3.5E-10 68.1 8.7 46 3-48 274-333 (433)
229 2jjq_A Uncharacterized RNA met 98.1 8.8E-06 3E-10 68.6 7.9 56 13-69 288-387 (425)
230 3tm4_A TRNA (guanine N2-)-meth 98.1 7.7E-06 2.6E-10 67.5 7.3 44 5-49 208-267 (373)
231 2qm3_A Predicted methyltransfe 98.1 1.4E-05 4.7E-10 65.9 8.7 58 12-69 169-277 (373)
232 3q87_B N6 adenine specific DNA 98.1 5.1E-06 1.8E-10 60.9 5.4 34 5-38 11-59 (170)
233 3sso_A Methyltransferase; macr 98.0 2.4E-06 8.2E-11 71.6 3.6 68 3-71 205-326 (419)
234 2wa2_A Non-structural protein 98.0 3.1E-07 1.1E-11 73.3 -1.7 33 3-36 70-115 (276)
235 1wy7_A Hypothetical protein PH 98.0 1.9E-05 6.7E-10 58.9 8.3 41 8-48 42-97 (207)
236 1ej0_A FTSJ; methyltransferase 98.0 3E-06 1E-10 61.0 3.5 33 3-36 9-59 (180)
237 3tqs_A Ribosomal RNA small sub 98.0 9E-06 3.1E-10 64.0 6.5 42 3-44 17-72 (255)
238 2oxt_A Nucleoside-2'-O-methylt 98.0 3.6E-07 1.2E-11 72.4 -1.8 32 2-33 61-105 (265)
239 1zq9_A Probable dimethyladenos 98.0 8.9E-06 3E-10 64.8 6.2 44 3-46 16-73 (285)
240 2h1r_A Dimethyladenosine trans 98.0 1.1E-05 3.9E-10 64.6 6.8 45 3-47 30-88 (299)
241 3uzu_A Ribosomal RNA small sub 98.0 1.3E-05 4.3E-10 64.0 6.2 41 3-43 30-88 (279)
242 2cmg_A Spermidine synthase; tr 97.9 6.7E-06 2.3E-10 64.9 4.5 57 13-69 70-171 (262)
243 2b9e_A NOL1/NOP2/SUN domain fa 97.9 2.9E-05 9.8E-10 62.8 8.2 43 7-49 94-153 (309)
244 3gru_A Dimethyladenosine trans 97.9 1.4E-05 4.7E-10 64.3 6.1 42 3-44 38-93 (295)
245 3frh_A 16S rRNA methylase; met 97.9 1.8E-05 6E-10 62.1 6.4 55 14-69 104-206 (253)
246 2xyq_A Putative 2'-O-methyl tr 97.9 7.2E-06 2.5E-10 65.8 4.1 68 3-71 46-173 (290)
247 1qam_A ERMC' methyltransferase 97.9 1.7E-05 5.9E-10 61.7 6.0 42 3-44 18-73 (244)
248 2p41_A Type II methyltransfera 97.9 2.8E-06 9.5E-11 68.6 1.2 34 3-36 70-120 (305)
249 1m6y_A S-adenosyl-methyltransf 97.8 2.2E-05 7.4E-10 63.3 5.4 44 4-47 15-74 (301)
250 2nyu_A Putative ribosomal RNA 97.8 2.6E-05 8.9E-10 57.6 5.3 21 50-70 126-146 (196)
251 3k0b_A Predicted N6-adenine-sp 97.8 6.1E-05 2.1E-09 62.8 7.7 45 5-49 191-289 (393)
252 3fut_A Dimethyladenosine trans 97.8 2.4E-05 8.3E-10 62.1 5.0 41 3-44 35-89 (271)
253 2h00_A Methyltransferase 10 do 97.8 2.9E-05 9.8E-10 60.1 5.2 34 15-48 65-114 (254)
254 2f8l_A Hypothetical protein LM 97.8 4.7E-05 1.6E-09 61.9 6.6 43 5-47 119-183 (344)
255 3ldu_A Putative methylase; str 97.7 7.6E-05 2.6E-09 62.0 7.5 46 4-49 184-283 (385)
256 3ftd_A Dimethyladenosine trans 97.7 2.7E-05 9.1E-10 61.0 4.3 40 3-42 19-73 (249)
257 3ldg_A Putative uncharacterize 97.7 0.00011 3.8E-09 61.1 8.0 45 5-49 184-282 (384)
258 2dul_A N(2),N(2)-dimethylguano 97.7 6E-05 2E-09 62.5 6.3 55 15-69 47-164 (378)
259 1af7_A Chemotaxis receptor met 97.6 4.8E-05 1.6E-09 60.5 5.0 29 15-43 105-157 (274)
260 1qyr_A KSGA, high level kasuga 97.6 4.6E-05 1.6E-09 59.8 4.7 42 3-44 9-64 (252)
261 1ne2_A Hypothetical protein TA 97.6 9.9E-05 3.4E-09 54.9 6.0 36 9-44 45-95 (200)
262 2okc_A Type I restriction enzy 97.6 0.00011 3.6E-09 62.0 6.7 45 4-48 160-233 (445)
263 4fzv_A Putative methyltransfer 97.6 0.0002 6.7E-09 59.1 7.9 41 7-47 140-196 (359)
264 3cvo_A Methyltransferase-like 97.6 0.00012 4.2E-09 55.7 5.9 42 6-48 22-76 (202)
265 1yub_A Ermam, rRNA methyltrans 97.6 6E-06 2E-10 64.1 -1.5 42 2-43 16-71 (245)
266 3bt7_A TRNA (uracil-5-)-methyl 97.5 0.00024 8.1E-09 58.4 7.0 46 3-49 202-261 (369)
267 2r6z_A UPF0341 protein in RSP 97.3 0.0002 6.7E-09 56.3 4.1 43 6-48 74-137 (258)
268 2qfm_A Spermine synthase; sper 97.2 0.00022 7.6E-09 58.8 4.2 30 15-44 188-232 (364)
269 3ll7_A Putative methyltransfer 97.1 0.00056 1.9E-08 57.3 5.2 36 13-48 91-142 (410)
270 3axs_A Probable N(2),N(2)-dime 97.0 0.0009 3.1E-08 55.8 5.9 56 14-69 51-158 (392)
271 2zig_A TTHA0409, putative modi 97.0 0.0011 3.7E-08 52.9 6.1 41 4-45 225-279 (297)
272 3o4f_A Spermidine synthase; am 96.9 0.0014 4.8E-08 52.6 6.1 56 14-69 82-198 (294)
273 3tka_A Ribosomal RNA small sub 96.9 0.00072 2.4E-08 55.3 4.1 37 4-40 46-99 (347)
274 3evf_A RNA-directed RNA polyme 96.9 0.0026 8.7E-08 50.5 7.0 32 3-34 62-109 (277)
275 3v97_A Ribosomal RNA large sub 96.8 0.0035 1.2E-07 55.9 8.3 45 5-49 180-282 (703)
276 2oyr_A UPF0341 protein YHIQ; a 96.8 0.0013 4.5E-08 51.7 5.0 41 5-45 76-132 (258)
277 2ar0_A M.ecoki, type I restric 96.5 0.0042 1.4E-07 53.7 6.5 42 5-46 159-234 (541)
278 4gqb_A Protein arginine N-meth 96.2 0.0064 2.2E-07 53.6 5.7 51 15-66 357-464 (637)
279 1wg8_A Predicted S-adenosylmet 95.9 0.011 3.9E-07 47.0 5.5 41 4-45 11-65 (285)
280 2wk1_A NOVP; transferase, O-me 95.8 0.014 4.7E-07 46.5 5.6 21 50-70 225-245 (282)
281 4eez_A Alcohol dehydrogenase 1 95.8 0.015 5.1E-07 46.7 5.8 65 6-70 154-264 (348)
282 3lkd_A Type I restriction-modi 95.7 0.03 1E-06 48.4 7.7 44 5-48 207-273 (542)
283 3gcz_A Polyprotein; flavivirus 95.7 0.01 3.5E-07 47.2 4.3 33 3-35 78-126 (282)
284 3p8z_A Mtase, non-structural p 95.6 0.011 3.6E-07 46.2 4.0 34 3-36 66-115 (267)
285 3khk_A Type I restriction-modi 95.6 0.023 8E-07 49.1 6.5 44 4-48 234-308 (544)
286 1f8f_A Benzyl alcohol dehydrog 95.5 0.017 5.6E-07 47.0 5.3 64 7-70 182-290 (371)
287 3lkz_A Non-structural protein 95.3 0.015 5E-07 46.8 4.1 32 3-34 82-129 (321)
288 3s2e_A Zinc-containing alcohol 95.2 0.019 6.5E-07 46.1 4.5 65 6-70 157-264 (340)
289 2ih2_A Modification methylase 95.1 0.0069 2.4E-07 49.8 1.8 36 4-39 28-80 (421)
290 3c6k_A Spermine synthase; sper 95.1 0.028 9.5E-07 46.6 5.2 29 14-42 204-247 (381)
291 3fpc_A NADP-dependent alcohol 95.0 0.023 7.9E-07 45.8 4.6 65 7-71 158-268 (352)
292 1pqw_A Polyketide synthase; ro 95.0 0.045 1.6E-06 40.2 5.9 61 9-69 32-137 (198)
293 4auk_A Ribosomal RNA large sub 95.0 0.021 7.3E-07 47.1 4.3 31 3-33 191-243 (375)
294 3s1s_A Restriction endonucleas 94.6 0.06 2.1E-06 48.8 6.5 28 12-39 318-364 (878)
295 3m6i_A L-arabinitol 4-dehydrog 94.6 0.079 2.7E-06 42.8 6.6 64 7-70 171-284 (363)
296 3ufb_A Type I restriction-modi 94.4 0.13 4.6E-06 44.1 8.1 44 4-47 206-278 (530)
297 3gms_A Putative NADPH:quinone 94.4 0.03 1E-06 44.9 3.7 65 6-70 135-244 (340)
298 3two_A Mannitol dehydrogenase; 93.9 0.028 9.5E-07 45.3 2.6 65 6-70 167-266 (348)
299 3jv7_A ADH-A; dehydrogenase, n 93.8 0.15 5.2E-06 40.7 6.8 64 7-70 161-271 (345)
300 3jyn_A Quinone oxidoreductase; 93.8 0.053 1.8E-06 43.2 4.0 64 7-70 132-240 (325)
301 1pl8_A Human sorbitol dehydrog 93.7 0.18 6.1E-06 40.6 7.1 63 8-70 164-274 (356)
302 4a2c_A Galactitol-1-phosphate 93.6 0.14 4.9E-06 40.8 6.2 67 6-72 151-263 (346)
303 1uuf_A YAHK, zinc-type alcohol 93.5 0.046 1.6E-06 44.5 3.3 63 7-69 186-288 (369)
304 3b5i_A S-adenosyl-L-methionine 93.5 0.2 6.7E-06 41.3 7.1 28 47-74 203-230 (374)
305 4b7c_A Probable oxidoreductase 93.4 0.061 2.1E-06 42.9 3.9 62 8-69 142-248 (336)
306 3uog_A Alcohol dehydrogenase; 93.4 0.11 3.9E-06 42.0 5.5 63 9-71 183-289 (363)
307 3qwb_A Probable quinone oxidor 92.9 0.066 2.3E-06 42.7 3.3 62 9-70 142-248 (334)
308 1rjw_A ADH-HT, alcohol dehydro 92.9 0.12 4.2E-06 41.3 4.8 64 7-70 156-262 (339)
309 4ej6_A Putative zinc-binding d 92.9 0.15 5.1E-06 41.5 5.4 64 7-70 174-285 (370)
310 4dup_A Quinone oxidoreductase; 92.7 0.082 2.8E-06 42.6 3.5 63 8-70 160-266 (353)
311 1cdo_A Alcohol dehydrogenase; 92.7 0.16 5.6E-06 41.1 5.4 64 7-70 184-295 (374)
312 2efj_A 3,7-dimethylxanthine me 92.6 0.24 8.1E-06 41.0 6.3 67 47-114 203-285 (384)
313 1e3j_A NADP(H)-dependent ketos 92.5 0.55 1.9E-05 37.6 8.3 63 8-70 161-272 (352)
314 2fzw_A Alcohol dehydrogenase c 92.5 0.22 7.4E-06 40.3 5.9 64 7-70 182-293 (373)
315 1v3u_A Leukotriene B4 12- hydr 92.4 0.14 4.9E-06 40.6 4.6 62 8-69 138-244 (333)
316 1e3i_A Alcohol dehydrogenase, 92.4 0.19 6.5E-06 40.7 5.4 64 7-70 187-298 (376)
317 3uko_A Alcohol dehydrogenase c 92.3 0.14 4.8E-06 41.6 4.5 65 7-71 185-297 (378)
318 1kol_A Formaldehyde dehydrogen 92.3 0.14 4.6E-06 41.9 4.4 63 8-70 178-301 (398)
319 1p0f_A NADP-dependent alcohol 92.2 0.21 7E-06 40.5 5.4 64 7-70 183-294 (373)
320 1m6e_X S-adenosyl-L-methionnin 92.1 0.29 9.9E-06 40.1 6.1 64 50-114 190-273 (359)
321 3eld_A Methyltransferase; flav 92.0 0.18 6.1E-06 40.4 4.6 32 3-34 69-116 (300)
322 2qy6_A UPF0209 protein YFCK; s 91.9 0.073 2.5E-06 41.5 2.3 12 13-24 58-69 (257)
323 1yb5_A Quinone oxidoreductase; 91.8 0.17 6E-06 40.7 4.5 61 9-69 164-269 (351)
324 2hcy_A Alcohol dehydrogenase 1 91.7 0.14 4.7E-06 41.1 3.8 64 7-70 161-270 (347)
325 2jhf_A Alcohol dehydrogenase E 91.5 0.25 8.6E-06 40.0 5.2 64 7-70 183-294 (374)
326 2j8z_A Quinone oxidoreductase; 91.5 0.13 4.4E-06 41.5 3.4 61 9-69 156-261 (354)
327 2d8a_A PH0655, probable L-thre 91.4 0.19 6.7E-06 40.2 4.4 62 8-70 161-268 (348)
328 1qor_A Quinone oxidoreductase; 91.4 0.18 6E-06 40.0 4.1 61 9-69 134-239 (327)
329 3fbg_A Putative arginate lyase 91.3 0.29 9.8E-06 39.2 5.3 62 7-68 136-247 (346)
330 2j3h_A NADP-dependent oxidored 91.2 0.33 1.1E-05 38.6 5.6 61 9-69 149-255 (345)
331 2k4m_A TR8_protein, UPF0146 pr 91.2 0.098 3.4E-06 37.7 2.1 26 12-37 32-73 (153)
332 3ua3_A Protein arginine N-meth 91.1 0.3 1E-05 43.6 5.6 19 25-43 448-466 (745)
333 2c0c_A Zinc binding alcohol de 91.0 0.25 8.5E-06 39.9 4.7 62 8-69 156-261 (362)
334 3gaz_A Alcohol dehydrogenase s 90.9 0.22 7.6E-06 39.9 4.3 61 8-69 143-246 (343)
335 4eye_A Probable oxidoreductase 90.8 0.16 5.4E-06 40.8 3.3 61 9-69 153-257 (342)
336 1vj0_A Alcohol dehydrogenase, 90.8 0.32 1.1E-05 39.5 5.2 63 8-70 187-299 (380)
337 4dvj_A Putative zinc-dependent 90.5 0.28 9.6E-06 39.7 4.6 61 8-68 159-269 (363)
338 3goh_A Alcohol dehydrogenase, 90.4 0.099 3.4E-06 41.3 1.7 60 8-68 135-228 (315)
339 2px2_A Genome polyprotein [con 90.3 0.3 1E-05 38.4 4.3 22 3-24 61-82 (269)
340 1wly_A CAAR, 2-haloacrylate re 90.0 0.24 8.3E-06 39.3 3.7 62 9-70 139-245 (333)
341 2dq4_A L-threonine 3-dehydroge 89.2 0.17 5.7E-06 40.5 2.2 60 10-70 160-263 (343)
342 2eih_A Alcohol dehydrogenase; 88.9 0.23 8E-06 39.7 2.8 59 11-69 162-265 (343)
343 3ip1_A Alcohol dehydrogenase, 88.7 0.66 2.3E-05 38.0 5.5 61 11-71 209-320 (404)
344 1i4w_A Mitochondrial replicati 88.4 0.7 2.4E-05 37.7 5.4 41 3-43 40-102 (353)
345 1jvb_A NAD(H)-dependent alcoho 88.0 0.45 1.5E-05 38.0 4.0 63 7-69 162-271 (347)
346 2py6_A Methyltransferase FKBM; 87.8 0.93 3.2E-05 37.5 5.9 34 12-45 223-274 (409)
347 3tqh_A Quinone oxidoreductase; 86.7 0.91 3.1E-05 35.8 5.1 61 7-68 144-244 (321)
348 3nx4_A Putative oxidoreductase 86.2 0.49 1.7E-05 37.3 3.2 63 8-70 138-242 (324)
349 3r24_A NSP16, 2'-O-methyl tran 85.5 0.88 3E-05 36.6 4.3 32 2-33 91-148 (344)
350 2cf5_A Atccad5, CAD, cinnamyl 85.3 0.27 9.1E-06 39.6 1.2 64 7-70 171-276 (357)
351 2dph_A Formaldehyde dismutase; 84.7 1.4 4.9E-05 35.8 5.4 63 8-70 178-300 (398)
352 2zb4_A Prostaglandin reductase 84.5 1.1 3.9E-05 35.7 4.6 62 8-69 151-260 (357)
353 3krt_A Crotonyl COA reductase; 84.2 2.2 7.5E-05 35.5 6.4 60 11-70 224-345 (456)
354 2h6e_A ADH-4, D-arabinose 1-de 84.1 1.5 5.1E-05 34.9 5.2 57 12-69 168-269 (344)
355 1tt7_A YHFP; alcohol dehydroge 83.1 0.58 2E-05 37.0 2.3 62 9-70 143-248 (330)
356 4a0s_A Octenoyl-COA reductase/ 82.1 4.3 0.00015 33.4 7.4 60 10-69 215-336 (447)
357 1xa0_A Putative NADPH dependen 79.8 0.45 1.6E-05 37.6 0.6 63 8-70 141-247 (328)
358 1boo_A Protein (N-4 cytosine-s 78.2 1.9 6.3E-05 34.4 3.8 44 4-48 242-299 (323)
359 2cdc_A Glucose dehydrogenase g 77.5 2.2 7.5E-05 34.2 4.0 61 10-70 166-279 (366)
360 1eg2_A Modification methylase 77.1 2.8 9.7E-05 33.4 4.6 42 4-46 232-290 (319)
361 1zsy_A Mitochondrial 2-enoyl t 77.0 6.5 0.00022 31.3 6.7 16 9-24 161-176 (357)
362 1piw_A Hypothetical zinc-type 75.5 3.6 0.00012 32.9 4.8 63 7-69 171-276 (360)
363 3pi7_A NADH oxidoreductase; gr 75.0 1.8 6.1E-05 34.5 2.8 62 7-69 156-263 (349)
364 2uyo_A Hypothetical protein ML 73.9 17 0.00057 28.7 8.3 23 50-72 199-221 (310)
365 2vn8_A Reticulon-4-interacting 68.7 3.2 0.00011 33.3 3.0 32 9-41 173-225 (375)
366 3gqv_A Enoyl reductase; medium 67.1 8.9 0.00031 30.7 5.4 55 14-69 163-263 (371)
367 4a27_A Synaptic vesicle membra 65.1 2.6 9E-05 33.5 1.8 63 7-70 134-239 (349)
368 2vz8_A Fatty acid synthase; tr 61.3 9 0.00031 38.9 5.1 60 9-68 1661-1769(2512)
369 3slk_A Polyketide synthase ext 60.4 4.9 0.00017 36.1 2.8 61 9-69 339-442 (795)
370 2b5w_A Glucose dehydrogenase; 56.3 5.8 0.0002 31.6 2.3 63 8-70 159-274 (357)
371 2zig_A TTHA0409, putative modi 55.5 4.8 0.00016 31.4 1.7 19 50-68 78-96 (297)
372 4dcm_A Ribosomal RNA large sub 55.4 49 0.0017 26.6 7.8 63 6-68 28-135 (375)
373 1gu7_A Enoyl-[acyl-carrier-pro 55.0 34 0.0012 26.9 6.8 17 53-69 259-275 (364)
374 1wg8_A Predicted S-adenosylmet 53.3 5.7 0.00019 31.4 1.8 21 50-70 214-234 (285)
375 1h2b_A Alcohol dehydrogenase; 53.2 27 0.00091 27.6 5.9 32 11-42 182-230 (359)
376 2vz8_A Fatty acid synthase; tr 51.8 6.1 0.00021 40.1 2.1 57 14-70 1239-1349(2512)
377 3b5i_A S-adenosyl-L-methionine 51.7 9.2 0.00031 31.3 2.8 45 3-47 35-86 (374)
378 2an7_A Protein PARD; bacterial 51.1 19 0.00065 22.9 3.6 35 27-61 4-55 (83)
379 1iz0_A Quinone oxidoreductase; 49.6 17 0.00058 28.0 4.0 59 10-69 121-218 (302)
380 1boo_A Protein (N-4 cytosine-s 48.0 7.4 0.00025 30.8 1.7 19 50-68 65-83 (323)
381 1yqd_A Sinapyl alcohol dehydro 46.1 30 0.001 27.5 5.1 63 7-69 178-282 (366)
382 1m6y_A S-adenosyl-methyltransf 42.3 9.5 0.00033 30.1 1.5 20 50-69 226-245 (301)
383 1g60_A Adenine-specific methyl 41.6 11 0.00037 28.7 1.7 19 50-68 55-73 (260)
384 3ado_A Lambda-crystallin; L-gu 38.0 1.5E+02 0.005 23.4 8.0 47 25-71 31-125 (319)
385 1eg2_A Modification methylase 36.0 15 0.00051 29.1 1.7 20 50-69 87-106 (319)
386 2km1_A Protein DRE2; yeast, an 35.2 19 0.00066 25.2 2.0 18 50-67 79-96 (136)
387 3mx6_A Methionine aminopeptida 31.1 60 0.0021 24.5 4.5 53 13-65 89-164 (262)
388 2i6v_A General secretion pathw 30.6 39 0.0013 20.8 2.8 18 7-24 31-48 (87)
389 3tos_A CALS11; methyltransfera 28.9 25 0.00086 27.1 1.9 23 50-72 198-220 (257)
390 2ih2_A Modification methylase 28.3 23 0.0008 28.4 1.7 20 50-69 145-164 (421)
391 1r6j_A Syntenin 1; PDZ, membra 26.8 30 0.001 21.6 1.7 17 8-24 36-52 (82)
392 1m5z_A GRIP, AMPA receptor int 26.5 42 0.0014 20.6 2.4 17 8-24 45-61 (91)
393 3fwz_A Inner membrane protein 26.4 80 0.0027 21.0 4.0 26 16-41 7-48 (140)
394 3vyw_A MNMC2; tRNA wobble urid 26.3 24 0.00083 28.0 1.4 19 50-68 207-225 (308)
395 2pa1_A PDZ and LIM domain prot 26.3 47 0.0016 20.1 2.6 17 8-24 39-55 (87)
396 2pkt_A PDZ and LIM domain prot 26.3 47 0.0016 20.4 2.6 17 8-24 40-56 (91)
397 2q3g_A PDZ and LIM domain prot 25.9 49 0.0017 20.2 2.6 17 8-24 40-56 (89)
398 3kzd_A TIAM-1, T-lymphoma inva 25.8 48 0.0017 21.3 2.6 17 8-24 48-64 (94)
399 2f5y_A Regulator of G-protein 25.4 45 0.0015 20.5 2.4 17 8-24 37-53 (91)
400 4gua_A Non-structural polyprot 25.2 67 0.0023 28.1 4.0 48 25-74 223-274 (670)
401 2vsp_A PDZ domain-containing p 25.0 51 0.0018 20.2 2.6 17 8-24 40-56 (91)
402 2i4s_A General secretion pathw 24.7 50 0.0017 21.1 2.6 18 7-24 49-66 (105)
403 3llv_A Exopolyphosphatase-rela 24.6 87 0.003 20.6 3.9 26 16-41 6-47 (141)
404 2uzc_A Human pdlim5, PDZ and L 24.6 53 0.0018 19.9 2.6 17 8-24 40-56 (88)
405 1rgw_A ZAsp protein; PDZ, cyph 24.6 48 0.0017 19.9 2.4 17 8-24 38-54 (85)
406 2eaq_A LIM domain only protein 24.6 53 0.0018 20.0 2.6 17 8-24 41-57 (90)
407 3zwc_A Peroxisomal bifunctiona 24.3 1.8E+02 0.006 25.9 6.7 46 25-70 341-430 (742)
408 1g9o_A NHE-RF; PDZ domain, com 24.0 55 0.0019 20.0 2.6 17 8-24 40-56 (91)
409 1y7n_A Amyloid beta A4 precurs 23.9 49 0.0017 20.7 2.3 17 8-24 44-60 (90)
410 2he4_A Na(+)/H(+) exchange reg 23.4 52 0.0018 20.1 2.4 17 8-24 41-57 (90)
411 2eeg_A PDZ and LIM domain prot 23.3 58 0.002 20.1 2.6 17 8-24 45-61 (94)
412 1vb7_A PDZ and LIM domain 2; P 22.9 53 0.0018 20.3 2.4 17 8-24 43-59 (94)
413 1o0x_A Methionine aminopeptida 22.8 1.4E+02 0.0049 22.3 5.3 53 13-65 98-173 (262)
414 3q6d_A Proline dipeptidase; st 22.7 1.5E+02 0.0052 23.1 5.6 28 13-40 206-245 (356)
415 2cpg_A REPA protein, transcrip 22.6 86 0.0029 16.4 2.9 29 26-54 4-34 (45)
416 2vsv_A Rhophilin-2; scaffold p 22.2 61 0.0021 21.2 2.6 17 8-24 57-73 (109)
417 2ego_A General receptor for ph 21.8 64 0.0022 20.0 2.6 17 8-24 50-66 (96)
418 3tb5_A Methionine aminopeptida 21.7 1.7E+02 0.0059 21.8 5.5 28 13-40 85-124 (264)
419 3id1_A Regulator of sigma E pr 21.4 66 0.0022 20.2 2.6 17 8-24 15-31 (95)
420 2d8i_A T-cell lymphoma invasio 21.3 50 0.0017 21.7 2.1 16 8-23 57-72 (114)
421 3iup_A Putative NADPH:quinone 21.3 63 0.0022 25.7 3.0 35 7-42 163-215 (379)
422 2gg2_A Methionine aminopeptida 21.2 1.7E+02 0.0057 21.8 5.3 52 13-64 87-161 (263)
423 2kv8_A RGS12, regulator of G-p 21.0 47 0.0016 19.9 1.8 16 9-24 37-52 (83)
424 3r68_A Na(+)/H(+) exchange reg 21.0 48 0.0017 20.4 1.9 17 8-24 42-58 (95)
425 1q3o_A Shank1; PDZ, GKAP, pept 21.0 66 0.0023 20.5 2.6 17 8-24 58-74 (109)
426 1whd_A RGS3, regulator of G-pr 21.0 55 0.0019 20.6 2.2 17 8-24 49-65 (100)
427 2jxo_A Ezrin-radixin-moesin-bi 21.0 61 0.0021 20.1 2.4 17 8-24 46-62 (98)
428 2w4f_A Protein LAP4; structura 20.9 62 0.0021 20.0 2.4 17 8-24 47-63 (97)
429 2q9v_A Membrane-associated gua 20.8 63 0.0022 19.6 2.4 17 8-24 40-57 (90)
430 2v90_A PDZ domain-containing p 20.8 54 0.0019 20.3 2.1 17 8-24 43-59 (96)
431 1v8d_A Hypothetical protein (T 20.7 32 0.0011 26.1 1.0 54 3-69 50-111 (235)
432 2i04_A Membrane-associated gua 20.6 60 0.0021 19.5 2.2 17 8-24 38-55 (85)
433 3ngh_A PDZ domain-containing p 20.6 69 0.0024 20.2 2.6 17 8-24 39-55 (106)
434 3ig4_A XAA-Pro aminopeptidase; 20.5 1.4E+02 0.0049 24.4 5.1 28 13-40 247-287 (427)
435 1wf7_A Enigma homologue protei 20.3 64 0.0022 20.3 2.4 17 8-24 42-58 (103)
436 3tav_A Methionine aminopeptida 20.2 1.7E+02 0.0059 22.2 5.3 28 13-40 116-155 (286)
437 2l66_A SSO7C4, transcriptional 20.2 73 0.0025 17.9 2.4 14 6-19 19-32 (53)
438 3qik_A Phosphatidylinositol 3, 20.2 52 0.0018 21.6 1.9 17 8-24 52-68 (101)
439 1lss_A TRK system potassium up 20.0 1.6E+02 0.0055 18.8 4.5 25 16-40 4-44 (140)
440 3pka_A Methionine aminopeptida 20.0 1.9E+02 0.0066 22.0 5.5 52 13-64 122-196 (285)
No 1
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.95 E-value=3.2e-27 Score=190.27 Aligned_cols=152 Identities=20% Similarity=0.327 Sum_probs=128.3
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
++++.+++.+++++|++|||||| +|+|||+|++|++.|+++++..++.
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 138 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPV 138 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCC
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCc
Confidence 47889999999999999999998 8999999999999999998765431
Q ss_pred -------------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCc---------cchhhhcccCCC
Q 042963 50 -------------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLS---------PGFMKEYVFPGG 95 (171)
Q Consensus 50 -------------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~---------~~~~~~~ifp~~ 95 (171)
.+++++.++|||||++++++++............ .+|+.+++||++
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 218 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGG 218 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTC
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCC
Confidence 4588999999999999999987765421111111 278999999999
Q ss_pred cCCCHHHHHHHHHhcCCcc--------------------------hhhhcCCCHHHHHHHHHHHHHHHHHhhcCCccEEE
Q 042963 96 CLPSLNRITSTMTSSSRLC--------------------------EILDLGFSEKFLRTWEYYFDYCAAGFKSRTLRNYE 149 (171)
Q Consensus 96 ~lp~~~~l~~~~~~~g~~~--------------------------~i~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~~ 149 (171)
.+|+++++.+.++++|+-. .+... |++++.|+|++||.+|+++|+.|.++++|
T Consensus 219 ~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~-~~~~~~~~w~~yl~~~~~~f~~~~~~~~q 297 (302)
T 3hem_A 219 RLPRISQVDYYSSNAGWKVERYHRIGANYVPTLNAWADALQAHKDEAIAL-KGQETCDIYMHYLRGCSDLFRDKYTDVCQ 297 (302)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEEECGGGHHHHHHHHHHHHHHTHHHHHHH-HCHHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCHHHHHHHHHhCCcEEEEEEeCchhHHHHHHHHHHHHHHhHHHHHHH-hCHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 9999999999999998622 12233 78999999999999999999999999999
Q ss_pred EEEEe
Q 042963 150 VVFSR 154 (171)
Q Consensus 150 ~~~~k 154 (171)
++++|
T Consensus 298 ~~~~~ 302 (302)
T 3hem_A 298 FTLVK 302 (302)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 2
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.91 E-value=4.1e-24 Score=170.49 Aligned_cols=152 Identities=21% Similarity=0.305 Sum_probs=125.3
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
++++.+++.++++++.+|||||| +|+|||+|++|++.|+++++..++.
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~f 130 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPV 130 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCC
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCe
Confidence 47888999999999999999998 8999999999999999998754421
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCcccc---------cccCccchhhhcccCCCcCCCHHH
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYD---------EHRLSPGFMKEYVFPGGCLPSLNR 102 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~---------~~~~~~~~~~~~ifp~~~lp~~~~ 102 (171)
.+++++.++|||||++++++++....... .......|+.+++||++.+|++++
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 210 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPM 210 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHH
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHH
Confidence 78999999999999999988776542210 001234577888999999999999
Q ss_pred HHHHHHhcCCcc--------------------------hhhhcCCCHHHHHHHHHHHHHHHHHhhcCCccEEEEEEEe
Q 042963 103 ITSTMTSSSRLC--------------------------EILDLGFSEKFLRTWEYYFDYCAAGFKSRTLRNYEVVFSR 154 (171)
Q Consensus 103 l~~~~~~~g~~~--------------------------~i~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~~~~~~k 154 (171)
+.+.++++|+-. ++... +++.+.++|++||.+|+++|+.|.++++|++++|
T Consensus 211 ~~~~l~~aGf~~~~~~~~~~~y~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~f~~g~~~~~~~~~~k 287 (287)
T 1kpg_A 211 VQECASANGFTVTRVQSLQPHYAKTLDLWSAALQANKGQAIAL-QSEEVYERYMKYLTGCAEMFRIGYIDVNQFTCQK 287 (287)
T ss_dssp HHHHHHTTTCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEEEC
T ss_pred HHHHHHhCCcEEEEEEeCcHhHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHhCCCCeEEEEEEEC
Confidence 999999999632 11122 5678889999999999999999999999999986
No 3
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.91 E-value=2.9e-23 Score=168.08 Aligned_cols=156 Identities=22% Similarity=0.311 Sum_probs=128.7
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
++++.+++.+++++|.+|||||| +|+|||+|++|++.|+++++..++.
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 156 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPV 156 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCc
Confidence 46788999999999999999998 8999999999999999998765431
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCcccccc---------cCccchhhhcccCCCcCCCHHH
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEH---------RLSPGFMKEYVFPGGCLPSLNR 102 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~---------~~~~~~~~~~ifp~~~lp~~~~ 102 (171)
.+++++.++|||||++++++++......... ....+|+.+++||++.+|+.++
T Consensus 157 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 236 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEM 236 (318)
T ss_dssp SEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHH
T ss_pred CEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHH
Confidence 6889999999999999998887654321000 0123678888999999999999
Q ss_pred HHHHHHhcCCcc--------------------------hhhhcCCCHHHHHHHHHHHHHHHHHhhcCCccEEEEEEEeCC
Q 042963 103 ITSTMTSSSRLC--------------------------EILDLGFSEKFLRTWEYYFDYCAAGFKSRTLRNYEVVFSRPG 156 (171)
Q Consensus 103 l~~~~~~~g~~~--------------------------~i~~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~~~~~~k~~ 156 (171)
+.+.++++|+-. ++.. .+++.+.++|+.||..|+++|+.|.++++|++++|++
T Consensus 237 ~~~~l~~aGf~~~~~~~~~~~y~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~f~~g~~~~~~~~~~k~~ 315 (318)
T 2fk8_A 237 MVEHGEKAGFTVPEPLSLRPHYIKTLRIWGDTLQSNKDKAIE-VTSEEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLKPG 315 (318)
T ss_dssp HHHHHHHTTCBCCCCEECHHHHHHHHHHHHHHHHHTHHHHHH-HSCHHHHHHHHHHHHHHHHHHHTTSCEEEEEEEECTT
T ss_pred HHHHHHhCCCEEEEEEecchhHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHCCCCeEEEEEEEeCC
Confidence 999999998632 1112 2578999999999999999999999999999999986
Q ss_pred CC
Q 042963 157 NV 158 (171)
Q Consensus 157 ~~ 158 (171)
+.
T Consensus 316 ~~ 317 (318)
T 2fk8_A 316 AA 317 (318)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 4
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.72 E-value=3.7e-16 Score=124.83 Aligned_cols=152 Identities=16% Similarity=0.153 Sum_probs=117.3
Q ss_pred hHHHHHHHHc----CCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH-------------
Q 042963 2 RKVSFLIEKA----RVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------- 49 (171)
Q Consensus 2 ~k~~~ll~~l----~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------- 49 (171)
++++.+++.+ +++++.+|||||| +|+|||+|+.|++.|+++++..++.
T Consensus 65 ~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 65 RTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 3578889999 9999999999998 8999999999999999998765542
Q ss_pred -----------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHH
Q 042963 50 -----------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITST 106 (171)
Q Consensus 50 -----------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~ 106 (171)
.++++++++|||||++++.+......... .....+...+.++ .+++..++.+.
T Consensus 145 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~ 220 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDK--SSIQPILDRIKLH--DMGSLGLYRSL 220 (297)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCG--GGGHHHHHHHTCS--SCCCHHHHHHH
T ss_pred CCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCch--HHHHHHHHHhcCC--CCCCHHHHHHH
Confidence 78999999999999999987655432110 1122333343333 46789999999
Q ss_pred HHhcCCcc-------------------hhh------hcCCCHHHHHHHHHHHHHHHHHhhcCCccEEEEEEEeCCC
Q 042963 107 MTSSSRLC-------------------EIL------DLGFSEKFLRTWEYYFDYCAAGFKSRTLRNYEVVFSRPGN 157 (171)
Q Consensus 107 ~~~~g~~~-------------------~i~------~~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~~~~~~k~~~ 157 (171)
++++|+-. .+. ...+++.+.+.|..++..+...++.|.+...+++++|+..
T Consensus 221 l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~Kp~~ 296 (297)
T 2o57_A 221 AKECGLVTLRTFSRPDSLVHHYSKVKAELIKRSSEIASFCSPEFQANMKRGLEHWIEGGRAGKLTWGGMLFRKSDK 296 (297)
T ss_dssp HHHTTEEEEEEEECHHHHHHHHHHHHHHHHHTHHHHTTTSCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEEEESSC
T ss_pred HHHCCCeEEEEEECchhhHHHHHHHHHHHHHhHHHHhccCCHHHHHHHHHHHHHHHHhccCCeEEEEEEEEECCCC
Confidence 99998522 000 1236778999999999999889999999999999999854
No 5
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.69 E-value=4.7e-16 Score=122.54 Aligned_cols=150 Identities=14% Similarity=0.062 Sum_probs=104.8
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
++++.+++.++++++.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 46788999999999999999998 8999999999999999998765532
Q ss_pred -------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhc
Q 042963 50 -------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSS 110 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~ 110 (171)
.++++++++|||||++++.++................+. ..+++..+++.+++.+.++++
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~a 206 (273)
T 3bus_A 128 ASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFR-AGGGVLSLGGIDEYESDVRQA 206 (273)
T ss_dssp TCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHH-HHHTCCCCCCHHHHHHHHHHT
T ss_pred CCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHH-hhcCccCCCCHHHHHHHHHHc
Confidence 789999999999999999887654321110000011111 235677889999999999999
Q ss_pred CCcc-hhhh------------------------cCCCHHHHHHHHHHHHHHHHHhhcCCccEEEEEEEeC
Q 042963 111 SRLC-EILD------------------------LGFSEKFLRTWEYYFDYCAAGFKSRTLRNYEVVFSRP 155 (171)
Q Consensus 111 g~~~-~i~~------------------------~~~~~~~~r~w~~yl~~~~~~f~~~~~~~~~~~~~k~ 155 (171)
|+-. .+.. ..+++...+.|.. .....+..+.+..++++++||
T Consensus 207 Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~kp 273 (273)
T 3bus_A 207 ELVVTSTVDISAQARPSLVKTAEAFENARSQVEPFMGAEGLDRMIA---TFRGLAEVPEAGYVLIGARKP 273 (273)
T ss_dssp TCEEEEEEECHHHHTTHHHHHHHHHHHTHHHHHHHHCHHHHHHHHH---HHHHHHTCTTEEEEEEEEECC
T ss_pred CCeEEEEEECcHhHHHHHHHHHHHHHHhHHHHHhhcCHHHHHHHHH---HHHHHhhCCCeeEEEEEEECC
Confidence 9632 0000 0123333333322 223336778889999999985
No 6
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.58 E-value=1.3e-14 Score=117.12 Aligned_cols=147 Identities=12% Similarity=0.148 Sum_probs=105.3
Q ss_pred HHHHHHHcC-CCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKAR-VSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~-l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.+.+++.++ ++++.+|||||| +|+|||+|+++++.|+++++..++.
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCC
Confidence 456788888 999999999998 8999999999999999998876542
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.+++++.++|||||++++.+.+..... ........++..+.++ .+++.+++.+.++++|
T Consensus 185 ~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~s~~~~~~~l~~aG- 260 (312)
T 3vc1_A 185 AVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRY-GQPSKWVSQINAHFEC--NIHSRREYLRAMADNR- 260 (312)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTT-CSCCHHHHHHHHHHTC--CCCBHHHHHHHHHTTT-
T ss_pred CEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccccccc-cchhHHHHHHHhhhcC--CCCCHHHHHHHHHHCC-
Confidence 789999999999999999876554321 1111222344444444 4788999999999998
Q ss_pred cchhhhcCCCHHHHHHHHHHHH---------HHHHHhhcCCccEEEEEEEe
Q 042963 113 LCEILDLGFSEKFLRTWEYYFD---------YCAAGFKSRTLRNYEVVFSR 154 (171)
Q Consensus 113 ~~~i~~~~~~~~~~r~w~~yl~---------~~~~~f~~~~~~~~~~~~~k 154 (171)
|..+....+.+...+.|+.-+. .....|+.+.++.+.++.+|
T Consensus 261 f~~~~~~~~~~~~~~~w~~~~~~~~~~g~~~~~~~~~~~~~~~y~~i~a~k 311 (312)
T 3vc1_A 261 LVPHTIVDLTPDTLPYWELRATSSLVTGIEKAFIESYRDGSFQYVLIAADR 311 (312)
T ss_dssp EEEEEEEECHHHHHHHHHHHTTSTTCCSCHHHHHHHHHHTSEEEEEEEEEE
T ss_pred CEEEEEEeCCHHHHHHHHHHHHHhhhhcChHHHHHHHHhcCCcEEEEEEee
Confidence 4433222345556666653332 22345667888888888776
No 7
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.55 E-value=2.7e-14 Score=111.45 Aligned_cols=143 Identities=18% Similarity=0.210 Sum_probs=99.3
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHh-chH-----------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEA-GLQ----------------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~-gl~----------------- 49 (171)
.++.+++.++++++.+|||||| +|+|+|+|+++++.|++++... ++.
T Consensus 43 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 43 ATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp HHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEE
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEE
Confidence 4577888899999999999998 8999999999999999886431 111
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCC-CcCCCHHHHHHHHHhcC
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPG-GCLPSLNRITSTMTSSS 111 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~-~~lp~~~~l~~~~~~~g 111 (171)
.++++++++|||||++++.+.+..... ........++.+. ..+++.+++.+.++++|
T Consensus 123 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 197 (266)
T 3ujc_A 123 LIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKE-----NWDDEFKEYVKQRKYTLITVEEYADILTACN 197 (266)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG-----GCCHHHHHHHHHHTCCCCCHHHHHHHHHHTT
T ss_pred EEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc-----cchHHHHHHHhcCCCCCCCHHHHHHHHHHcC
Confidence 678999999999999999877554311 1112223333332 35788999999999999
Q ss_pred Ccc--------------------------hhhhcCCCHHHHH----HHHHHHHHHHHHhhcCCccEEEEEEEeC
Q 042963 112 RLC--------------------------EILDLGFSEKFLR----TWEYYFDYCAAGFKSRTLRNYEVVFSRP 155 (171)
Q Consensus 112 ~~~--------------------------~i~~~~~~~~~~r----~w~~yl~~~~~~f~~~~~~~~~~~~~k~ 155 (171)
+-. .+... +++...+ .|+.|+..|. .|...-..++++||
T Consensus 198 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~g~~~w~~~~~~Kp 266 (266)
T 3ujc_A 198 FKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKL-FSEKKFISLDDGWSRKIKDSK----RKMQRWGYFKATKN 266 (266)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEEECC
T ss_pred CeEEEEEeCCHHHHHHHHHHHHHHHhCHHHHHHh-cCHHHHHHHHHHHHHHHHHHH----cCcccceEEEEeCC
Confidence 622 01111 3444444 3888887665 35555666677775
No 8
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.52 E-value=5.7e-14 Score=111.57 Aligned_cols=156 Identities=11% Similarity=0.043 Sum_probs=105.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
.++.+++.+..+ +.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 57 ~l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 135 (285)
T 4htf_A 57 DLDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLET 135 (285)
T ss_dssp HHHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSS
T ss_pred HHHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCC
Confidence 366778887766 689999998 8999999999999999998765542
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCccccc-ccCccchhhhcc-------cCCCcCCCHHHH
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDE-HRLSPGFMKEYV-------FPGGCLPSLNRI 103 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~-~~~~~~~~~~~i-------fp~~~lp~~~~l 103 (171)
.++++++++|||||++++...+.....+.. .......+.... +......+++++
T Consensus 136 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (285)
T 4htf_A 136 PVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQV 215 (285)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHH
T ss_pred CceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHH
Confidence 789999999999999999775432211000 000001111111 112245688999
Q ss_pred HHHHHhcCCcc-hhhh---------cCC--CHHHHHHHHHHHHHHHHHhhcCCccEEEEEEEeCCCCC
Q 042963 104 TSTMTSSSRLC-EILD---------LGF--SEKFLRTWEYYFDYCAAGFKSRTLRNYEVVFSRPGNVA 159 (171)
Q Consensus 104 ~~~~~~~g~~~-~i~~---------~~~--~~~~~r~w~~yl~~~~~~f~~~~~~~~~~~~~k~~~~~ 159 (171)
...++++|+-. .+.. ..+ .+.+.+++...+.+|....-.+....+|++++|+++.+
T Consensus 216 ~~~l~~aGf~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~varK~~~~~ 283 (285)
T 4htf_A 216 YLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKD 283 (285)
T ss_dssp HHHHHHTTCEEEEEEEESSSGGGCSSTTHHHHTHHHHHHHHHHHTTSTTGGGGCSEEEEEEECCCC--
T ss_pred HHHHHHCCCceeeeeeEEEeeecccccccCcccHHHHHHHHHHhcCCChHHHHHhheEEEEEcCCccc
Confidence 99999999632 1110 001 12367788888888887777788889999999997754
No 9
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.51 E-value=7.9e-14 Score=109.84 Aligned_cols=147 Identities=12% Similarity=0.086 Sum_probs=99.7
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHH------HHHHHHHHHHHhchH---------
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEE------QLKYTEMKVKEAGLQ--------- 49 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~------~~~~A~~~~~~~gl~--------- 49 (171)
++...+++.++++++++|||||| +|+|||+|++ |++.|+++++..++.
T Consensus 30 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 57889999999999999999998 7999999997 999999987643220
Q ss_pred ------------------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccc-hhhhcc---c---
Q 042963 50 ------------------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPG-FMKEYV---F--- 92 (171)
Q Consensus 50 ------------------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~-~~~~~i---f--- 92 (171)
.+++.+.++++|||++++.++............... +..... .
T Consensus 110 ~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (275)
T 3bkx_A 110 NLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSD 189 (275)
T ss_dssp CTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCT
T ss_pred hhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccc
Confidence 445666666777999999887765321110000000 111100 0
Q ss_pred CCC--cCCCHHHHHHHHHhcCCcc--------------------------hhhh-cCCCHHHHHHHHHHHHHHHHHhhcC
Q 042963 93 PGG--CLPSLNRITSTMTSSSRLC--------------------------EILD-LGFSEKFLRTWEYYFDYCAAGFKSR 143 (171)
Q Consensus 93 p~~--~lp~~~~l~~~~~~~g~~~--------------------------~i~~-~~~~~~~~r~w~~yl~~~~~~f~~~ 143 (171)
+.+ .+++.+++.+.++++|+-. .+.. .||++++.++|..+ |+.+ .+
T Consensus 190 ~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~g--~~ 264 (275)
T 3bkx_A 190 VANIRTLITPDTLAQIAHDNTWTYTAGTIVEDPTLDDAHWEIATTNALLTELKLSTDLRDRVKPLLEAM---SHNG--TA 264 (275)
T ss_dssp TCSCCCCCCHHHHHHHHHHHTCEEEECCCBCCTTCTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH---TTSC--CC
T ss_pred cccccccCCHHHHHHHHHHCCCeeEEEEEecCCCCCCchhhHHHHHHHHHHHHhhccccHHHHHHHHHH---Hhcc--cc
Confidence 112 4789999999999998622 0001 35788999999984 3332 55
Q ss_pred CccEEEEEEE
Q 042963 144 TLRNYEVVFS 153 (171)
Q Consensus 144 ~~~~~~~~~~ 153 (171)
.++++|++++
T Consensus 265 ~~~~~~~~~~ 274 (275)
T 3bkx_A 265 SLATFTGRIT 274 (275)
T ss_dssp CCCEEEEEEE
T ss_pred ccceeeEEEe
Confidence 8889998875
No 10
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.49 E-value=5e-14 Score=112.09 Aligned_cols=108 Identities=12% Similarity=0.050 Sum_probs=81.4
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHh---------------chH---
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEA---------------GLQ--- 49 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~---------------gl~--- 49 (171)
.+++.+++.+++++|.+|||||| +|+|||+|++|++.|+++++.. .+.
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~f 111 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHF 111 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCc
Confidence 36788999999999999999998 8999999999999999986431 011
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCc-----------------ccc------cccCccchhh
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQ-----------------CYD------EHRLSPGFMK 88 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~-----------------~~~------~~~~~~~~~~ 88 (171)
.+++++.++| |||+++++.-..... .+. ......+|+.
T Consensus 112 D~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~ 190 (261)
T 3iv6_A 112 DFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFFDPSDKTFHFREAGDVLD 190 (261)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHEETTTTEEEGGGTTHHHH
T ss_pred cEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeeecCcccceehhhhhhHHH
Confidence 5789999999 999999874322110 000 1134578999
Q ss_pred hcccCCCcCCCHHHHHHHHHhcC
Q 042963 89 EYVFPGGCLPSLNRITSTMTSSS 111 (171)
Q Consensus 89 ~~ifp~~~lp~~~~l~~~~~~~g 111 (171)
+|+||+|.+|++.-+. .+...|
T Consensus 191 ~~~~p~g~~~~~~~~~-~~~~~g 212 (261)
T 3iv6_A 191 RALVPHGLIDKPTLLE-WYRRRG 212 (261)
T ss_dssp HHCCCCTTCCHHHHHH-HHHHTC
T ss_pred hccCCCCcccHHHHHH-HHHhcC
Confidence 9999999999876554 455555
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.47 E-value=3.3e-14 Score=111.97 Aligned_cols=104 Identities=11% Similarity=0.119 Sum_probs=77.9
Q ss_pred HHHHHHHcC-CCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKAR-VSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~-l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
+..+++.+. ++++.+|||||| +|+|||+|+.+++.|+++++..++.
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNE 113 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCC
Confidence 456677776 889999999998 8999999999999999998776542
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.+++++.++|||||++++.+.+....... ......|... +| .+++..++.+.++++|+
T Consensus 114 ~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~~~~~~~~~--~~--~~~~~~~~~~~l~~aGf 188 (267)
T 3kkz_A 114 ELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERP-AEINDFWMDA--YP--EIDTIPNQVAKIHKAGY 188 (267)
T ss_dssp CEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCC-HHHHHHHHHH--CT--TCEEHHHHHHHHHHTTE
T ss_pred CEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCCh-HHHHHHHHHh--CC--CCCCHHHHHHHHHHCCC
Confidence 78999999999999999987653221100 0011112222 33 57889999999999984
No 12
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.41 E-value=1.8e-12 Score=100.90 Aligned_cols=105 Identities=15% Similarity=0.080 Sum_probs=79.0
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.++.+++.++++++.+|||||| +|+|+|+|++|++.|+++++..|+.
T Consensus 24 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 103 (256)
T 1nkv_A 24 KYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEK 103 (256)
T ss_dssp HHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSC
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCC
Confidence 5778999999999999999998 8999999999999999998766532
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcc-cCCCcCCCHHHHHHHHHhcC
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYV-FPGGCLPSLNRITSTMTSSS 111 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~i-fp~~~lp~~~~l~~~~~~~g 111 (171)
.++++++++|||||++++.+....... ....+...+. .....+++..++.+.++++|
T Consensus 104 fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 178 (256)
T 1nkv_A 104 CDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLP-----ATEEIAQACGVSSTSDFLTLPGLVGAFDDLG 178 (256)
T ss_dssp EEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCC-----SSHHHHHTTTCSCGGGSCCHHHHHHHHHTTT
T ss_pred CCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCC-----ChHHHHHHHhcccccccCCHHHHHHHHHHCC
Confidence 779999999999999998764332211 0111111111 11125678999999999998
Q ss_pred C
Q 042963 112 R 112 (171)
Q Consensus 112 ~ 112 (171)
+
T Consensus 179 f 179 (256)
T 1nkv_A 179 Y 179 (256)
T ss_dssp B
T ss_pred C
Confidence 4
No 13
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.38 E-value=1.8e-13 Score=111.06 Aligned_cols=109 Identities=13% Similarity=0.157 Sum_probs=84.5
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC--------------e---EEEEcCCHHHHHHHHHHHHHhchH---------------
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL--------------D---YTGITLSEEQLKYTEMKVKEAGLQ--------------- 49 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc--------------~---VtgId~S~~~~~~A~~~~~~~gl~--------------- 49 (171)
.+++.+++.+++++|++|||||| + |+|+|+|+++++.|+++++..|+.
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 46788999999999999999998 4 999999999999999998766542
Q ss_pred --------------HHHHHHHhccccCcEEEEEcccCC--Ccccccc-cCccchhhhcccCCCcCCCHHHHHHHHHhc
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQFSSVP--DQCYDEH-RLSPGFMKEYVFPGGCLPSLNRITSTMTSS 110 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~i~~~--~~~~~~~-~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~ 110 (171)
.+.+++.++|||||+++++....+ ....... +....|+.+++||++++|..+++...+++.
T Consensus 142 ~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~ 219 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKDPYLVGNYKLETRFITAGGNLGNLLERN 219 (317)
T ss_dssp GCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEETTEEEEEEEEECCCCBCCGGGSCHHHHH
T ss_pred CCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEECCCCcccceEEEEEEeCCcEEEEEeccEEEEEccCccccccccc
Confidence 334788999999999999865443 1211111 223468889999999999988776655543
No 14
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.34 E-value=2.6e-12 Score=100.52 Aligned_cols=109 Identities=17% Similarity=0.124 Sum_probs=79.5
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
+.++.+++.++++++.+|||||| +|+|+|+|++|++.|+++++..++.
T Consensus 24 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 103 (260)
T 1vl5_A 24 SDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDER 103 (260)
T ss_dssp CCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTC
T ss_pred HHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCC
Confidence 35788999999999999999998 8999999999999999998765532
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccC-CCcCCCHHHHHHHHHhcC
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFP-GGCLPSLNRITSTMTSSS 111 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp-~~~lp~~~~l~~~~~~~g 111 (171)
.++++++++|||||++++.+...+..... ......+.....+ .....+..++.+.++++|
T Consensus 104 fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 181 (260)
T 1vl5_A 104 FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAF--DVFYNYVEKERDYSHHRAWKKSDWLKMLEEAG 181 (260)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHH--HHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHT
T ss_pred EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHH--HHHHHHHHHhcCccccCCCCHHHHHHHHHHCC
Confidence 78999999999999999976544322100 0000111111111 224567899999999998
Q ss_pred C
Q 042963 112 R 112 (171)
Q Consensus 112 ~ 112 (171)
+
T Consensus 182 f 182 (260)
T 1vl5_A 182 F 182 (260)
T ss_dssp C
T ss_pred C
Confidence 5
No 15
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.32 E-value=5.4e-12 Score=98.24 Aligned_cols=104 Identities=11% Similarity=0.102 Sum_probs=77.1
Q ss_pred HHHHHHHc-CCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKA-RVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l-~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
+..+++.+ +++++.+|||||| +|+|+|+|+.+++.|+++++..++.
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCC
Confidence 45566666 6889999999998 8999999999999999998876532
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.+++++.++|||||++++.+.+....... ......|... +| .+++..++.+.++++|+
T Consensus 114 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~--~~--~~~~~~~~~~~l~~aGf 188 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERP-AEIEDFWMDA--YP--EISVIPTCIDKMERAGY 188 (257)
T ss_dssp CEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCC-HHHHHHHHHH--CT--TCCBHHHHHHHHHHTTE
T ss_pred CEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCh-HHHHHHHHHh--CC--CCCCHHHHHHHHHHCCC
Confidence 78999999999999999987542221100 0011122222 33 37889999999999984
No 16
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.31 E-value=3.1e-12 Score=101.47 Aligned_cols=61 Identities=16% Similarity=0.061 Sum_probs=53.3
Q ss_pred CCCCCeEEEeCC------------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------------
Q 042963 13 VSKGHDVLFLRL------------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc------------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------- 49 (171)
++||.+|||||| +|+|||+|++|++.|+++++..+..
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 799999999998 7999999999999999998765432
Q ss_pred -----------HHHHHHHhccccCcEEEEEcccCC
Q 042963 50 -----------QFFGCCESLLAEHGLLLLQFSSVP 73 (171)
Q Consensus 50 -----------~~~~~~~r~LkpgG~l~i~~i~~~ 73 (171)
.++++++++|||||++++.+....
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 579999999999999999775543
No 17
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.29 E-value=2.3e-11 Score=92.47 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=76.7
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
.+.+++.++++++.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSS
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCC
Confidence 567899999999999999997 8999999999999999998766532
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcC
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSS 111 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g 111 (171)
.+++++.++|||||++++.++....... .... ....+.+++...++++|
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-----~~~~--------~~~~~~~~~~~~l~~~G 172 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK-----GPPP--------EEVYSEWEVGLILEDAG 172 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS-----SCCG--------GGSCCHHHHHHHHHHTT
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc-----CCch--------hcccCHHHHHHHHHHCC
Confidence 7899999999999999998765543211 1111 12357889999999998
Q ss_pred C
Q 042963 112 R 112 (171)
Q Consensus 112 ~ 112 (171)
+
T Consensus 173 f 173 (219)
T 3dh0_A 173 I 173 (219)
T ss_dssp C
T ss_pred C
Confidence 4
No 18
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.25 E-value=4.4e-12 Score=98.79 Aligned_cols=64 Identities=17% Similarity=0.050 Sum_probs=52.3
Q ss_pred HHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------
Q 042963 6 FLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------- 49 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------- 49 (171)
+.+..+...+|.||||||| +|||||+|++|++.|+++++..+..
T Consensus 51 ~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD 130 (236)
T 3orh_A 51 HALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFD 130 (236)
T ss_dssp HHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEE
T ss_pred HHHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCc
Confidence 3444455688999999998 8999999999999999987654421
Q ss_pred --------------------HHHHHHHhccccCcEEEEEc
Q 042963 50 --------------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 --------------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.++++++|+|||||+|++..
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 67889999999999998753
No 19
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.24 E-value=2.8e-11 Score=93.75 Aligned_cols=107 Identities=15% Similarity=0.178 Sum_probs=77.1
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
...+++.++++++.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 89 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFD 89 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEE
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEE
Confidence 356788999999999999998 8999999999999999998765432
Q ss_pred ---------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcc-cCCCcCCCHHHHHHHHHhcCC
Q 042963 50 ---------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYV-FPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 ---------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~i-fp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||++++.+...+.... .......+.... .......+..++.+.++++||
T Consensus 90 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 166 (239)
T 1xxl_A 90 IITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPV--LDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQL 166 (239)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHH--HHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTE
T ss_pred EEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChh--HHHHHHHHHHhccccccCCCCHHHHHHHHHHCCC
Confidence 7899999999999999997655433210 000000111000 111244678999999999984
No 20
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.24 E-value=2.4e-11 Score=97.58 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=73.2
Q ss_pred HcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------
Q 042963 10 KARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------------- 49 (171)
Q Consensus 10 ~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~----------------------- 49 (171)
...++++.+|||||| +|+|+|+|+.+++.|+++++..++.
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~ 192 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLT 192 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEE
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEE
Confidence 456789999999998 8999999999999999998765432
Q ss_pred ---------------HHHHHHHhccccCcEEEEEcccCCCccccc-------ccCccchhhhcccCCC------cCCCHH
Q 042963 50 ---------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDE-------HRLSPGFMKEYVFPGG------CLPSLN 101 (171)
Q Consensus 50 ---------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~-------~~~~~~~~~~~ifp~~------~lp~~~ 101 (171)
.++++++++|||||++++.+++........ .........+++++.. .+.+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 379999999999999999887654321000 0001112222222221 356889
Q ss_pred HHHHHHHhcCC
Q 042963 102 RITSTMTSSSR 112 (171)
Q Consensus 102 ~l~~~~~~~g~ 112 (171)
++.+.++++||
T Consensus 273 ~~~~~l~~aGF 283 (305)
T 3ocj_A 273 QTRAQLEEAGF 283 (305)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
Confidence 99999999984
No 21
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.23 E-value=1.3e-11 Score=93.96 Aligned_cols=107 Identities=13% Similarity=0.061 Sum_probs=73.4
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
.++.+++.+..+++.+|||||| +|+|+|+|+++++.|+++.. .++.
T Consensus 33 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d~~~~~~~~~fD~v~ 111 (220)
T 3hnr_A 33 HYEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP-KEFSITEGDFLSFEVPTSIDTIV 111 (220)
T ss_dssp THHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC-TTCCEESCCSSSCCCCSCCSEEE
T ss_pred HHHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC-CceEEEeCChhhcCCCCCeEEEE
Confidence 5678888888899999999998 89999999999999998864 1111
Q ss_pred --------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhc-------ccCCCcCCCHHHHHHHHH
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEY-------VFPGGCLPSLNRITSTMT 108 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~-------ifp~~~lp~~~~l~~~~~ 108 (171)
.+++++.++|||||++++.+......... .....+.... -.+...+++.+++...++
T Consensus 112 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 189 (220)
T 3hnr_A 112 STYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAY--DKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFE 189 (220)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHH--HHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHH
T ss_pred ECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHH--HHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHH
Confidence 38999999999999999976443321100 0000000000 011124567788888888
Q ss_pred hcCC
Q 042963 109 SSSR 112 (171)
Q Consensus 109 ~~g~ 112 (171)
++|+
T Consensus 190 ~aGf 193 (220)
T 3hnr_A 190 NNGF 193 (220)
T ss_dssp HTTE
T ss_pred HCCC
Confidence 8873
No 22
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.23 E-value=1.3e-11 Score=93.89 Aligned_cols=95 Identities=18% Similarity=0.151 Sum_probs=68.3
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHH---------------hchH----
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKE---------------AGLQ---- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~---------------~gl~---- 49 (171)
.+..+++.++++++.+|||||| +|||||+|++|++.|+++... .++.
T Consensus 10 ~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 10 DLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 3566788889999999999998 899999999999999988532 1111
Q ss_pred -------------------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCC
Q 042963 50 -------------------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLP 98 (171)
Q Consensus 50 -------------------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp 98 (171)
.++++++++|||||++++.++...... ... .| +..
T Consensus 90 d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~-----~~~-------~~--~~~ 155 (203)
T 1pjz_A 90 DFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL-----LEG-------PP--FSV 155 (203)
T ss_dssp CCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS-----SSS-------CC--CCC
T ss_pred ccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc-----cCC-------CC--CCC
Confidence 578999999999999665554332110 000 01 124
Q ss_pred CHHHHHHHHHhcCC
Q 042963 99 SLNRITSTMTSSSR 112 (171)
Q Consensus 99 ~~~~l~~~~~~~g~ 112 (171)
+.+++.+.+++ |+
T Consensus 156 ~~~el~~~~~~-gf 168 (203)
T 1pjz_A 156 PQTWLHRVMSG-NW 168 (203)
T ss_dssp CHHHHHHTSCS-SE
T ss_pred CHHHHHHHhcC-Cc
Confidence 68888888877 63
No 23
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.22 E-value=3.9e-11 Score=96.93 Aligned_cols=62 Identities=8% Similarity=0.210 Sum_probs=56.0
Q ss_pred HHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------------
Q 042963 8 IEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------------- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------------- 49 (171)
.+.+++++|++|||||| +|+|||+|++|++.|++++++.|+.
T Consensus 115 ~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~ 194 (298)
T 3fpf_A 115 AALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMV 194 (298)
T ss_dssp HHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEE
T ss_pred HHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEE
Confidence 45689999999999997 8999999999999999998876642
Q ss_pred --------HHHHHHHhccccCcEEEEEc
Q 042963 50 --------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++..
T Consensus 195 ~a~~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 195 AALAEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 78999999999999999865
No 24
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.18 E-value=6.4e-11 Score=91.62 Aligned_cols=92 Identities=14% Similarity=0.193 Sum_probs=68.7
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHH-------HHh--c-----hH---------------
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKV-------KEA--G-----LQ--------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~-------~~~--g-----l~--------------- 49 (171)
++++.+|||||| +|+|||+|++|++.|++++ ... . ++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~ 118 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPER 118 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGG
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHH
Confidence 678999999998 8999999999999998751 110 1 11
Q ss_pred --HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCC-cCCCHHHHHHHHHhcCC
Q 042963 50 --QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGG-CLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 --~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~-~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||++++.+.+... ...+...++.|.. ..++..++...++++|+
T Consensus 119 ~~~~l~~~~~~LkpgG~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 176 (240)
T 3dli_A 119 LFELLSLCYSKMKYSSYIVIESPNPTS--------LYSLINFYIDPTHKKPVHPETLKFILEYLGF 176 (240)
T ss_dssp HHHHHHHHHHHBCTTCCEEEEEECTTS--------HHHHHHHTTSTTCCSCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCcEEEEEeCCcch--------hHHHHHHhcCccccccCCHHHHHHHHHHCCC
Confidence 7899999999999999998755332 1223334444443 56788999999999995
No 25
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.17 E-value=1.2e-10 Score=87.99 Aligned_cols=65 Identities=11% Similarity=0.173 Sum_probs=58.1
Q ss_pred HHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
..+++.++++++.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 109 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDP 109 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCC
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCC
Confidence 56788999999999999998 8999999999999999998766542
Q ss_pred -------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++..
T Consensus 110 D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 110 DRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp SEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 78899999999999999864
No 26
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.17 E-value=6.9e-11 Score=89.39 Aligned_cols=108 Identities=16% Similarity=0.130 Sum_probs=72.5
Q ss_pred HHHHHHHcC-CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 4 VSFLIEKAR-VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 4 ~~~ll~~l~-l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
++.+++.+. ++++.+|||||| +|+|+|+|+++++.|++.. ..++.
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~-~~~~~~~~~d~~~~~~~~~~D~v~ 112 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHG-LDNVEFRQQDLFDWTPDRQWDAVF 112 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGC-CTTEEEEECCTTSCCCSSCEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcC-CCCeEEEecccccCCCCCceeEEE
Confidence 556777776 889999999998 8999999999999998721 01111
Q ss_pred --------------HHHHHHHhccccCcEEEEEcccCCCcccccc--cCccchhhhcccCC------CcCCCHHHHHHHH
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEH--RLSPGFMKEYVFPG------GCLPSLNRITSTM 107 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~--~~~~~~~~~~ifp~------~~lp~~~~l~~~~ 107 (171)
.++++++++|||||++++.+.+.+....... ....+++.+.+..+ ..+++..++.+.+
T Consensus 113 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 192 (218)
T 3ou2_A 113 FAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERL 192 (218)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHH
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHH
Confidence 6789999999999999998876643211110 01122222222111 1357899999999
Q ss_pred HhcCC
Q 042963 108 TSSSR 112 (171)
Q Consensus 108 ~~~g~ 112 (171)
+++|+
T Consensus 193 ~~aGf 197 (218)
T 3ou2_A 193 TALGW 197 (218)
T ss_dssp HHTTE
T ss_pred HHCCC
Confidence 99984
No 27
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.17 E-value=1.6e-11 Score=92.68 Aligned_cols=67 Identities=12% Similarity=0.140 Sum_probs=58.4
Q ss_pred HHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
.+.+++.++++++ +|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNY 111 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTC
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCccc
Confidence 4677888898888 9999998 8999999999999999998776532
Q ss_pred -----------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.++++++++|||||++++.+..
T Consensus 112 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 112 ADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 7899999999999999987643
No 28
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.16 E-value=7.6e-11 Score=90.55 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=56.2
Q ss_pred HHHHHHcC-CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhc-hH-----------------
Q 042963 5 SFLIEKAR-VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAG-LQ----------------- 49 (171)
Q Consensus 5 ~~ll~~l~-l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~g-l~----------------- 49 (171)
+.+++.+. ..++.+|||||| +|+|+|+|+++++.|++++...+ +.
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~ 112 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDM 112 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceE
Confidence 44555555 678899999998 89999999999999999865332 11
Q ss_pred ----------------HHHHHHHhccccCcEEEEEcccCCC
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQFSSVPD 74 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~i~~~~ 74 (171)
.++++++++|||||++++.+.....
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 4899999999999999998766543
No 29
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.16 E-value=3.3e-12 Score=99.08 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=45.5
Q ss_pred CCCCCCeEEEeCC----------------eEEEEcCC-HHHHHHH---HHHHHHhchH----------------------
Q 042963 12 RVSKGHDVLFLRL----------------DYTGITLS-EEQLKYT---EMKVKEAGLQ---------------------- 49 (171)
Q Consensus 12 ~l~~g~rVLDIGc----------------~VtgId~S-~~~~~~A---~~~~~~~gl~---------------------- 49 (171)
..+++++|||||| +|+|||+| +.|++.| ++++++.++.
T Consensus 21 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~ 100 (225)
T 3p2e_A 21 IGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADS 100 (225)
T ss_dssp HTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEE
T ss_pred hCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEE
Confidence 3578999999999 79999999 6677666 6665554432
Q ss_pred -------------------HHHHHHHhccccCcEEEEE
Q 042963 50 -------------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~i~ 68 (171)
.++++++++|||||++++.
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 2578999999999999983
No 30
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.15 E-value=7.8e-11 Score=94.15 Aligned_cols=69 Identities=20% Similarity=0.243 Sum_probs=57.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch------H-------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL------Q------------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl------~------------- 49 (171)
.+..+++.+..+++ +|||||| +|+|||+|+.+++.|++++...++ .
T Consensus 71 ~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 149 (299)
T 3g2m_A 71 EAREFATRTGPVSG-PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDK 149 (299)
T ss_dssp HHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSC
T ss_pred HHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCC
Confidence 35667777777666 9999998 899999999999999999876542 1
Q ss_pred ---------------------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 ---------------------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ---------------------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.++++++++|||||++++.....
T Consensus 150 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 150 RFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp CEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 67899999999999999977554
No 31
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.15 E-value=5.7e-11 Score=91.28 Aligned_cols=108 Identities=17% Similarity=0.217 Sum_probs=71.8
Q ss_pred HHHHHHHcC-CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 4 VSFLIEKAR-VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 4 ~~~ll~~l~-l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
.+.+++.+. ..++.+|||||| +|+|||+|+++++.|+++... ++.
T Consensus 30 ~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d~~~~~~~~~fD~v~ 108 (250)
T 2p7i_A 30 HPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD-GITYIHSRFEDAQLPRRYDNIV 108 (250)
T ss_dssp HHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS-CEEEEESCGGGCCCSSCEEEEE
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC-CeEEEEccHHHcCcCCcccEEE
Confidence 344555554 468889999998 899999999999999988642 211
Q ss_pred ------------HHHHHHH-hccccCcEEEEEcccCCCcccc------cccCccchhhhc-ccCCCcCCCHHHHHHHHHh
Q 042963 50 ------------QFFGCCE-SLLAEHGLLLLQFSSVPDQCYD------EHRLSPGFMKEY-VFPGGCLPSLNRITSTMTS 109 (171)
Q Consensus 50 ------------~~~~~~~-r~LkpgG~l~i~~i~~~~~~~~------~~~~~~~~~~~~-ifp~~~lp~~~~l~~~~~~ 109 (171)
.++++++ ++|||||++++........... .......+.... ........+..++.+.+++
T Consensus 109 ~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 188 (250)
T 2p7i_A 109 LTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASR 188 (250)
T ss_dssp EESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHH
T ss_pred EhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHH
Confidence 7899999 9999999999976544321000 000000000000 1122345789999999999
Q ss_pred cCC
Q 042963 110 SSR 112 (171)
Q Consensus 110 ~g~ 112 (171)
+|+
T Consensus 189 ~Gf 191 (250)
T 2p7i_A 189 AGL 191 (250)
T ss_dssp TTC
T ss_pred CCC
Confidence 985
No 32
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.14 E-value=4.8e-11 Score=99.69 Aligned_cols=105 Identities=10% Similarity=0.006 Sum_probs=74.4
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHH-----------H-------hchH
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVK-----------E-------AGLQ 49 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~-----------~-------~gl~ 49 (171)
+..+.+++.++++++.+|||||| +|+|||+|++|++.|+++.. . ..++
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD 173 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPAN 173 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEE
Confidence 35677889999999999999998 89999999999999987610 0 0000
Q ss_pred ---------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 ---------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 ---------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||++++........ . ....|- ....++....+..++...++++|+
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~-~----~~~~~~-~~~~~~~~~~s~~~l~~ll~~aGf 245 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDI-V----AKTSFD-QIFDEHFFLFSATSVQGMAQRCGF 245 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHH-H----HHTCGG-GCSTTCCEECCHHHHHHHHHHTTE
T ss_pred EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHh-h----hhcchh-hhhhhhhhcCCHHHHHHHHHHcCC
Confidence 78999999999999999865332110 0 000111 111233456789999999999985
No 33
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.14 E-value=2e-11 Score=95.46 Aligned_cols=61 Identities=15% Similarity=0.302 Sum_probs=52.6
Q ss_pred HHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhc-hH---------------------
Q 042963 9 EKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAG-LQ--------------------- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~g-l~--------------------- 49 (171)
+.++++||++|||+|| +|+|+|+|++|++.+++++++.+ +.
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDv 150 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDG 150 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEE
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEE
Confidence 4578999999999998 89999999999999998876543 21
Q ss_pred ------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++++.|||||++++..
T Consensus 151 Vf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 151 LYADVAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 67899999999999998853
No 34
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.14 E-value=7.2e-11 Score=87.66 Aligned_cols=63 Identities=13% Similarity=0.102 Sum_probs=52.3
Q ss_pred HHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------------
Q 042963 9 EKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------- 49 (171)
-...+++|++|||||| +|+|||+|++|++.|+++++..++.
T Consensus 16 l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 16 LAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp HHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred HHHhCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 3457889999999998 8999999999999999998765431
Q ss_pred --------------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 --------------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 --------------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
..++++.++|||||++++..+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 3458889999999999986543
No 35
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.14 E-value=4e-11 Score=90.78 Aligned_cols=96 Identities=17% Similarity=0.158 Sum_probs=70.1
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
.++.+++.++++++++|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 65 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (210)
T 3lbf_A 65 MVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF 144 (210)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence 3577889999999999999998 8999999999999999998765532
Q ss_pred ----------HHHHHHHhccccCcEEEEEcccCCCccccc-ccCccchhhhcccCCCcCCC
Q 042963 50 ----------QFFGCCESLLAEHGLLLLQFSSVPDQCYDE-HRLSPGFMKEYVFPGGCLPS 99 (171)
Q Consensus 50 ----------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~-~~~~~~~~~~~ifp~~~lp~ 99 (171)
.+.+++.++|||||++++..-. ....... .+....|..+.+++..++|.
T Consensus 145 D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~pl 204 (210)
T 3lbf_A 145 DAIIVTAAPPEIPTALMTQLDEGGILVLPVGE-EHQYLKRVRRRGGEFIIDTVEAVRFVPL 204 (210)
T ss_dssp EEEEESSBCSSCCTHHHHTEEEEEEEEEEECS-SSCEEEEEEEETTEEEEEEEEECCCCBC
T ss_pred cEEEEccchhhhhHHHHHhcccCcEEEEEEcC-CceEEEEEEEcCCeEEEEEeccEEEEEc
Confidence 3346789999999999986543 2211111 12233455566666666664
No 36
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.14 E-value=1.9e-10 Score=87.59 Aligned_cols=66 Identities=9% Similarity=0.089 Sum_probs=57.6
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------- 49 (171)
..+++.++++++++|||||| +|+|||+|+++++.|+++++..++.
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D 124 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPE 124 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCS
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCC
Confidence 45778899999999999998 8999999999999999998765432
Q ss_pred ----------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ----------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ----------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++++.++|||||++++...
T Consensus 125 ~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 125 AVFIGGGGSQALYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp EEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred EEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence 478999999999999998754
No 37
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.13 E-value=2.4e-10 Score=87.94 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=69.9
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch----H----------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL----Q---------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl----~---------------- 49 (171)
+..+++.+.++++ +|||||| +|+|+|+|+.+++.|++++...+. .
T Consensus 56 l~~~~~~~~~~~~-~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 134 (235)
T 3lcc_A 56 IVHLVDTSSLPLG-RALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFD 134 (235)
T ss_dssp HHHHHHTTCSCCE-EEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEE
T ss_pred HHHHHHhcCCCCC-CEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCee
Confidence 4556666777776 9999998 899999999999999999865332 1
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.+++++.++|||||++++......... ...+ +..+.+++.+.++++|+
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-----~~~~----------~~~~~~~~~~~l~~~Gf 199 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHV-----GGPP----------YKVDVSTFEEVLVPIGF 199 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCC-----SCSS----------CCCCHHHHHHHHGGGTE
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccC-----CCCC----------ccCCHHHHHHHHHHcCC
Confidence 688999999999999998665433210 0111 12568899999999884
No 38
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.11 E-value=1.5e-10 Score=91.04 Aligned_cols=104 Identities=13% Similarity=0.126 Sum_probs=71.7
Q ss_pred HHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------
Q 042963 9 EKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------------- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~----------------------- 49 (171)
....++++.+|||||| +|+|+|+|+.+++.|++++...++.
T Consensus 31 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 110 (276)
T 3mgg_A 31 HDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIF 110 (276)
T ss_dssp TTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEE
T ss_pred hcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEE
Confidence 4456789999999998 8999999999999999998765532
Q ss_pred ------------HHHHHHHhccccCcEEEEEcccCCCccccc-ccCccchh----hhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 ------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDE-HRLSPGFM----KEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 ------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~-~~~~~~~~----~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.+++++.++|||||++++.+.......+.. ......+. ......++...+..++...++++||
T Consensus 111 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 190 (276)
T 3mgg_A 111 VCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGF 190 (276)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTC
T ss_pred EechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCC
Confidence 789999999999999998764332111000 00001111 1112233444566788899999985
No 39
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.10 E-value=2.7e-10 Score=86.36 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=71.9
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHH-------hch-----------H---
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKE-------AGL-----------Q--- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~-------~gl-----------~--- 49 (171)
..+++.+...++.+|||||| +|+|+|+|+.+++.|+++... ..+ +
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~ 121 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLIC 121 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEE
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEE
Confidence 45777788888899999998 899999999999999986110 001 0
Q ss_pred -----------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhc--ccC------CCcCCCHHHHHHHHHhc
Q 042963 50 -----------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEY--VFP------GGCLPSLNRITSTMTSS 110 (171)
Q Consensus 50 -----------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~--ifp------~~~lp~~~~l~~~~~~~ 110 (171)
.++++++++|||||++++.+.......... ....|.... -+. ...+.+.+++.+.++++
T Consensus 122 ~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 199 (227)
T 3e8s_A 122 ANFALLHQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGD--YQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMA 199 (227)
T ss_dssp EESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTC--CSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHT
T ss_pred ECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCccccCccc--cccccchhhhhccccCcccceEEEecHHHHHHHHHHc
Confidence 789999999999999999876443221000 011111100 011 11356899999999999
Q ss_pred CC
Q 042963 111 SR 112 (171)
Q Consensus 111 g~ 112 (171)
||
T Consensus 200 Gf 201 (227)
T 3e8s_A 200 GL 201 (227)
T ss_dssp TE
T ss_pred CC
Confidence 84
No 40
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.10 E-value=1.8e-10 Score=90.81 Aligned_cols=91 Identities=13% Similarity=0.075 Sum_probs=64.6
Q ss_pred CCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHh------------------------------
Q 042963 12 RVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEA------------------------------ 46 (171)
Q Consensus 12 ~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~------------------------------ 46 (171)
+..+|++|||||| +|+|+|+|+.|++.|+++++..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 6789999999998 6999999999999998764221
Q ss_pred ----------------c--------hH-------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCc
Q 042963 47 ----------------G--------LQ-------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLS 83 (171)
Q Consensus 47 ----------------g--------l~-------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~ 83 (171)
. ++ ..+++++++|||||++++..+.... .+.
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~-~~~----- 205 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLP-SYM----- 205 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EEE-----
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCc-cce-----
Confidence 0 00 5678899999999999998654322 110
Q ss_pred cchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 84 PGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 84 ~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.....++. ...+.+++.+.++++||
T Consensus 206 ---~g~~~~~~-~~~~~~~l~~~l~~aGF 230 (263)
T 2a14_A 206 ---VGKREFSC-VALEKGEVEQAVLDAGF 230 (263)
T ss_dssp ---ETTEEEEC-CCCCHHHHHHHHHHTTE
T ss_pred ---eCCeEeec-cccCHHHHHHHHHHCCC
Confidence 00111221 23478899999999984
No 41
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.09 E-value=4.5e-10 Score=85.47 Aligned_cols=66 Identities=14% Similarity=0.174 Sum_probs=54.9
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhch--------H---------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGL--------Q--------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl--------~--------- 49 (171)
+++.+++.+...++.+|||||| +|+|||+|+++++.|++++...++ .
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 17 RLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred HHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 5677788888889999999998 899999999999999998754321 1
Q ss_pred -------------------------HHHHHHHhccccCcEEEEE
Q 042963 50 -------------------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 -------------------------~~~~~~~r~LkpgG~l~i~ 68 (171)
.+++++.++|||||.++..
T Consensus 97 ~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 97 DKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp CGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 6789999999999966543
No 42
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.09 E-value=3.3e-10 Score=83.11 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=57.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
...+++.+.++++++|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCS
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCC
Confidence 356788899999999999998 8999999999999999987654421
Q ss_pred --------------HHHHHHHhccccCcEEEEEcc
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++++.++|||||++++...
T Consensus 94 ~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 94 NPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp CCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence 478999999999999988654
No 43
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.08 E-value=2.9e-10 Score=88.05 Aligned_cols=99 Identities=10% Similarity=0.060 Sum_probs=71.8
Q ss_pred HHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHh-chH------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEA-GLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~-gl~------------------ 49 (171)
+..+++.+...++.+|||||| +|+|+|+|+.+++.|++++... ++.
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 161 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDL 161 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEE
T ss_pred HHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEE
Confidence 356788888889999999998 6999999999999999886431 111
Q ss_pred ----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||++++.+.......+ .... .......+..++.+.++++|+
T Consensus 162 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~l~~aGf 230 (254)
T 1xtp_A 162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF---------LVDK-EDSSLTRSDIHYKRLFNESGV 230 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE---------EEET-TTTEEEBCHHHHHHHHHHHTC
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc---------eecc-cCCcccCCHHHHHHHHHHCCC
Confidence 6789999999999999997643322111 0000 111234578999999999984
No 44
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.08 E-value=4.1e-10 Score=86.62 Aligned_cols=95 Identities=12% Similarity=0.056 Sum_probs=67.2
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------------
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~----------------------------- 49 (171)
++++.+|||||| +|+|||+|+.+++.|+++....++.
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 468999999998 8999999999999999874322221
Q ss_pred ---HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcc-cCCCcCCCHHHHHHHHHhcCC
Q 042963 50 ---QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYV-FPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 ---~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~i-fp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||++++.+........ ...+...+- .......++.++.+.++++|+
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 192 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAILGPTAKPR-----ENSYPRLYGKDVVCNTMMPWEFEQLVKEQGF 192 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTCGGG-----GGGGGGGGTCCCSSCCCCHHHHHHHHHHTTE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEcCCcchhh-----hhhhhhhccccccccCCCHHHHHHHHHHcCC
Confidence 7899999999999999998754432210 111111111 112245678899999999984
No 45
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.08 E-value=1.3e-10 Score=91.83 Aligned_cols=107 Identities=9% Similarity=0.036 Sum_probs=72.7
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch--------------H-------
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL--------------Q------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl--------------~------- 49 (171)
+.+++.+.++++.+|||||| +|+|+|+|++|++.|+++.....+ +
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~ 126 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFSNAM 126 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEEESC
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEEcch
Confidence 46778889999999999998 899999999999999987421110 0
Q ss_pred --------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcc-----cC-CCcCCCHHHHHHHHHhcCC
Q 042963 50 --------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYV-----FP-GGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~i-----fp-~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||++++......... .........+.+.- ++ ...+++..++.+.++++||
T Consensus 127 l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 202 (279)
T 3ccf_A 127 LHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIK-YILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGF 202 (279)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTH-HHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTE
T ss_pred hhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchH-HHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCC
Confidence 789999999999999998765432210 00000000111110 11 1246789999999999985
No 46
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.07 E-value=1.6e-10 Score=89.75 Aligned_cols=65 Identities=20% Similarity=0.099 Sum_probs=54.1
Q ss_pred HHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
..+++.++..++.+|||||| +|+|+|+|+++++.|+++....++.
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 113 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVL 113 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEE
Confidence 45667777789999999998 8999999999999999886422111
Q ss_pred ------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.++++++++|||||++++..
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 114 SSLALHYIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EchhhhhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 78999999999999999864
No 47
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.06 E-value=7.2e-10 Score=89.57 Aligned_cols=108 Identities=11% Similarity=0.102 Sum_probs=78.1
Q ss_pred HHHHHHHcCC--CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------
Q 042963 4 VSFLIEKARV--SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l--~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------- 49 (171)
+..+++.++. +++.+|||||| +++|+|+| .+++.|++++...++.
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC
Confidence 4567788888 89999999998 79999999 9999999998765432
Q ss_pred ---------------------HHHHHHHhccccCcEEEEEcccCCCccccc-ccCccchhhhcccCCCcCCCHHHHHHHH
Q 042963 50 ---------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDE-HRLSPGFMKEYVFPGGCLPSLNRITSTM 107 (171)
Q Consensus 50 ---------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~-~~~~~~~~~~~ifp~~~lp~~~~l~~~~ 107 (171)
.++++++++|||||++++.+...+...... .....++......+++...+.+++.+.+
T Consensus 231 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll 310 (335)
T 2r3s_A 231 NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMF 310 (335)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHH
Confidence 678999999999999999876654321100 0000011111123466778899999999
Q ss_pred HhcCC
Q 042963 108 TSSSR 112 (171)
Q Consensus 108 ~~~g~ 112 (171)
+++||
T Consensus 311 ~~aGf 315 (335)
T 2r3s_A 311 SNAGF 315 (335)
T ss_dssp HHTTC
T ss_pred HHCCC
Confidence 99884
No 48
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.06 E-value=3.8e-10 Score=86.99 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=38.9
Q ss_pred hHHHHHHHHcCCC--------------CCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 2 RKVSFLIEKARVS--------------KGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 2 ~k~~~ll~~l~l~--------------~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
++++.++...++. ++.+|||||| +|+|||+|+++++.|+++++..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~d~~~~f~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l 83 (218)
T 3dxy_A 7 HALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL 83 (218)
T ss_dssp CHHHHHHHHHBCCCCSSCCCHHHHHSSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhHHhCCCCCCCCCCHHHHcCCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC
Confidence 4566676666654 6889999998 699999999999999999887664
No 49
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.06 E-value=2.3e-10 Score=91.29 Aligned_cols=100 Identities=17% Similarity=0.132 Sum_probs=68.1
Q ss_pred HHHHHcC-CCCCCeEEEeCC--------------------eE--EEEcCCHHHHHHHHHHHHHh-c--------------
Q 042963 6 FLIEKAR-VSKGHDVLFLRL--------------------DY--TGITLSEEQLKYTEMKVKEA-G-------------- 47 (171)
Q Consensus 6 ~ll~~l~-l~~g~rVLDIGc--------------------~V--tgId~S~~~~~~A~~~~~~~-g-------------- 47 (171)
.++++++ .+++.+|||||| +| +|+|+|++|++.|+++++.. +
T Consensus 42 ~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~ 121 (292)
T 2aot_A 42 GIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS 121 (292)
T ss_dssp HHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH
T ss_pred hHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh
Confidence 3444444 478899999998 22 99999999999999886431 0
Q ss_pred ---------h-H-------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcc--cC---
Q 042963 48 ---------L-Q-------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYV--FP--- 93 (171)
Q Consensus 48 ---------l-~-------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~i--fp--- 93 (171)
+ . ..+++++++|||||++++....... .+. .+...+. ++
T Consensus 122 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~------~~~~~~~~~~~~~~ 194 (292)
T 2aot_A 122 EYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSS-GWD------KLWKKYGSRFPQDD 194 (292)
T ss_dssp HHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTS-HHH------HHHHHHGGGSCCCT
T ss_pred hhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCc-cHH------HHHHHHHHhccCCC
Confidence 1 1 7899999999999999987543321 111 1111110 11
Q ss_pred CCcCCCHHHHHHHHHhcCC
Q 042963 94 GGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 94 ~~~lp~~~~l~~~~~~~g~ 112 (171)
....++..++.+.++++|+
T Consensus 195 ~~~~~~~~~~~~~l~~aGf 213 (292)
T 2aot_A 195 LCQYITSDDLTQMLDNLGL 213 (292)
T ss_dssp TCCCCCHHHHHHHHHHHTC
T ss_pred cccCCCHHHHHHHHHHCCC
Confidence 1245788999999999985
No 50
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.06 E-value=9.6e-10 Score=83.15 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=68.4
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHh----chH----------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEA----GLQ---------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~----gl~---------------- 49 (171)
+..++.. ++++.+|||||| +|+|+|+|+++++.|+++.... .+.
T Consensus 34 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~ 111 (211)
T 3e23_A 34 LTKFLGE--LPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHAC 111 (211)
T ss_dssp HHHHHTT--SCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSC
T ss_pred HHHHHHh--cCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCc
Confidence 4444444 568999999998 8999999999999999885211 000
Q ss_pred ----------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcC-Cc
Q 042963 50 ----------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSS-RL 113 (171)
Q Consensus 50 ----------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g-~~ 113 (171)
.++++++++|||||++++......... ......+ ....+.+++.+.++++| +-
T Consensus 112 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~~l~~aG~f~ 175 (211)
T 3e23_A 112 LLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEG-------RDKLARY----YNYPSEEWLRARYAEAGTWA 175 (211)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCE-------ECTTSCE----ECCCCHHHHHHHHHHHCCCS
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccc-------ccccchh----ccCCCHHHHHHHHHhCCCcE
Confidence 688999999999999998754332211 0111111 13568999999999998 63
No 51
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.05 E-value=9.1e-10 Score=90.89 Aligned_cols=104 Identities=12% Similarity=0.047 Sum_probs=78.4
Q ss_pred HHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
+..+++.++++++.+|||||| +++++|+ +++++.|++++.+.++.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~ 269 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPDGA 269 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSC
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCc
Confidence 456788889999999999998 8999999 99999999998766532
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhh--hcccCCCcCCCHHHHHHHHHh
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMK--EYVFPGGCLPSLNRITSTMTS 109 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~--~~ifp~~~lp~~~~l~~~~~~ 109 (171)
.++++++++|||||+++|.+...+...... ..+.. .....++...+.+++.+.+++
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~----~~~~d~~~~~~~~g~~~t~~e~~~ll~~ 345 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS----TLFVDLLLLVLVGGAERSESEFAALLEK 345 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH----HHHHHHHHHHHHSCCCBCHHHHHHHHHT
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc----hhHhhHHHHhhcCCccCCHHHHHHHHHH
Confidence 589999999999999999887665432110 11111 112345677788888888888
Q ss_pred cCC
Q 042963 110 SSR 112 (171)
Q Consensus 110 ~g~ 112 (171)
+||
T Consensus 346 aGf 348 (369)
T 3gwz_A 346 SGL 348 (369)
T ss_dssp TTE
T ss_pred CCC
Confidence 873
No 52
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.04 E-value=1.3e-10 Score=85.84 Aligned_cols=127 Identities=13% Similarity=0.135 Sum_probs=85.5
Q ss_pred HHHcCCCCCCeEEEeCCeEEEEcCCHHHHHHHHHHHHHh-----------ch---H---------------------HHH
Q 042963 8 IEKARVSKGHDVLFLRLDYTGITLSEEQLKYTEMKVKEA-----------GL---Q---------------------QFF 52 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc~VtgId~S~~~~~~A~~~~~~~-----------gl---~---------------------~~~ 52 (171)
+..+++++|++||||||..++||+|++|++.|+++.... .. . .++
T Consensus 5 ~~~~g~~~g~~vL~~~~g~v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l 84 (176)
T 2ld4_A 5 MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEIL 84 (176)
T ss_dssp CTTTTCCTTSEEEEEECTTSCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHH
T ss_pred ehccCCCCCCEEEEecCCceeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHH
Confidence 345789999999999997667999999999999885311 11 1 789
Q ss_pred HHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCCcchhhhc---CCCHHHHHHH
Q 042963 53 GCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSRLCEILDL---GFSEKFLRTW 129 (171)
Q Consensus 53 ~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~~~~i~~~---~~~~~~~r~w 129 (171)
++++++|||||++++....... .. . ..+..+.+++.+.++++|+ +.+.+. .++....+.|
T Consensus 85 ~~~~r~LkpgG~l~~~~~~~~~-------~~-~--------~~~~~~~~~~~~~l~~aGf-i~~~~~~~~~~~~~~~~~~ 147 (176)
T 2ld4_A 85 AEIARILRPGGCLFLKEPVETA-------VD-N--------NSKVKTASKLCSALTLSGL-VEVKELQREPLTPEEVQSV 147 (176)
T ss_dssp HHHHHHEEEEEEEEEEEEEESS-------SC-S--------SSSSCCHHHHHHHHHHTTC-EEEEEEEEECCCHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEcccccc-------cc-c--------ccccCCHHHHHHHHHHCCC-cEeecCcccCCCHHHHHHH
Confidence 9999999999999984211100 00 0 1123468899999999997 544332 2355555556
Q ss_pred HHHHHHHHHHhhcCCccEEEEEEEeCC
Q 042963 130 EYYFDYCAAGFKSRTLRNYEVVFSRPG 156 (171)
Q Consensus 130 ~~yl~~~~~~f~~~~~~~~~~~~~k~~ 156 (171)
... .++.........++.+|+.
T Consensus 148 ~~~-----~g~~~~~~~~~~~~a~Kp~ 169 (176)
T 2ld4_A 148 REH-----LGHESDNLLFVQITGKKPN 169 (176)
T ss_dssp HHH-----TCCCCSSEEEEEEEEECCC
T ss_pred HHH-----hcccCCceEEEEEeccCCc
Confidence 431 1233344557788888874
No 53
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.04 E-value=3.8e-10 Score=85.82 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=55.6
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhch--------H---------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGL--------Q--------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl--------~--------- 49 (171)
+++.+++.+...++.+|||||| +|+|||+|+++++.|+++++..++ .
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 17 RMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 5678888888889999999998 899999999999999998753321 1
Q ss_pred -------------------------HHHHHHHhccccCcEEEEE
Q 042963 50 -------------------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 -------------------------~~~~~~~r~LkpgG~l~i~ 68 (171)
.++++++++|||||.+++.
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 6789999999999977654
No 54
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.03 E-value=1.5e-10 Score=90.04 Aligned_cols=107 Identities=15% Similarity=0.129 Sum_probs=68.8
Q ss_pred HHHHHHc-----CCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHh--chH--------------
Q 042963 5 SFLIEKA-----RVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEA--GLQ-------------- 49 (171)
Q Consensus 5 ~~ll~~l-----~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~--gl~-------------- 49 (171)
+.+++.+ .++++.+|||||| +|+|+|+|++|++.|++++... ++.
T Consensus 24 ~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 103 (263)
T 2yqz_A 24 GQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDE 103 (263)
T ss_dssp HHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTT
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCC
Confidence 3445544 7889999999998 8999999999999999886110 111
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCccc--ccccCccchhhhcccC---CCcCCCHHHHHHH
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQCY--DEHRLSPGFMKEYVFP---GGCLPSLNRITST 106 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~--~~~~~~~~~~~~~ifp---~~~lp~~~~l~~~ 106 (171)
.++++++++|||||++++. +...+... .............-++ .....+..++.+.
T Consensus 104 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (263)
T 2yqz_A 104 SVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEA 182 (263)
T ss_dssp CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHH
T ss_pred CeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHH
Confidence 7899999999999999987 32221000 0000001111111122 1134567888889
Q ss_pred HHhcCC
Q 042963 107 MTSSSR 112 (171)
Q Consensus 107 ~~~~g~ 112 (171)
++++||
T Consensus 183 l~~~Gf 188 (263)
T 2yqz_A 183 LRRLGL 188 (263)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 999885
No 55
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.03 E-value=4.6e-10 Score=87.15 Aligned_cols=110 Identities=13% Similarity=0.117 Sum_probs=74.5
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhc--------------hH---
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAG--------------LQ--- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~g--------------l~--- 49 (171)
....+++.+.++++.+|||||| +|+|+|+|++|++.|+++..... ++
T Consensus 21 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 100 (259)
T 2p35_A 21 PARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLY 100 (259)
T ss_dssp HHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEE
Confidence 4567888899999999999998 79999999999999998732110 00
Q ss_pred ------------HHHHHHHhccccCcEEEEEcccCCCcccc----cccCccchhhhc--c-cCCCcCCCHHHHHHHHHhc
Q 042963 50 ------------QFFGCCESLLAEHGLLLLQFSSVPDQCYD----EHRLSPGFMKEY--V-FPGGCLPSLNRITSTMTSS 110 (171)
Q Consensus 50 ------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~----~~~~~~~~~~~~--i-fp~~~lp~~~~l~~~~~~~ 110 (171)
.++++++++|||||++++........... .......|.... . .....+++..++.+.++++
T Consensus 101 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 180 (259)
T 2p35_A 101 ANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPK 180 (259)
T ss_dssp EESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGG
T ss_pred EeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhc
Confidence 78999999999999999976533221100 000001122110 0 1123567899999999999
Q ss_pred CC
Q 042963 111 SR 112 (171)
Q Consensus 111 g~ 112 (171)
|+
T Consensus 181 Gf 182 (259)
T 2p35_A 181 SS 182 (259)
T ss_dssp EE
T ss_pred CC
Confidence 85
No 56
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.02 E-value=5.3e-10 Score=84.12 Aligned_cols=71 Identities=21% Similarity=0.234 Sum_probs=56.5
Q ss_pred HHHHHHHc-CCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKA-RVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l-~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
+..+++.+ ...++.+|||||| +|+|+|+|+++++.|++++...+..
T Consensus 11 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~f 90 (209)
T 2p8j_A 11 LYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESM 90 (209)
T ss_dssp HHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCE
T ss_pred HHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCce
Confidence 34444443 3577899999998 8999999999999999987654311
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCC
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPD 74 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~ 74 (171)
.++++++++|||||++++.+.+..+
T Consensus 91 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 91 SFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred eEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 6789999999999999998776554
No 57
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.02 E-value=2.7e-10 Score=83.34 Aligned_cols=71 Identities=10% Similarity=0.047 Sum_probs=57.6
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHh-------c-----hH-------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEA-------G-----LQ------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~-------g-----l~------- 49 (171)
+.+.+++.++++++.+|||||| +|+|+|+|+++++.|+++.... . ++
T Consensus 5 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d~~~~~~~~D~v~~~~~ 84 (170)
T 3i9f_A 5 RPEEYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDPKEIPDNSVDFILFANS 84 (170)
T ss_dssp -CTTTHHHHHSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSGGGSCTTCEEEEEEESC
T ss_pred CHHHHHHhcCcCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCCCCCCCCceEEEEEccc
Confidence 4456788889999999999998 8999999999999999872110 0 00
Q ss_pred --------HHHHHHHhccccCcEEEEEcccCC
Q 042963 50 --------QFFGCCESLLAEHGLLLLQFSSVP 73 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~~i~~~ 73 (171)
.+++++.++|||||++++.++...
T Consensus 85 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 85 FHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp STTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred hhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 789999999999999999876554
No 58
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.02 E-value=1.2e-09 Score=81.35 Aligned_cols=67 Identities=16% Similarity=0.085 Sum_probs=56.9
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------- 49 (171)
..+++.++..++.+|||||| +|+|+|+|+.+++.|+++++..++.
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v 101 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFI 101 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEE
T ss_pred HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEE
Confidence 35677888889999999998 8999999999999999988765431
Q ss_pred ---------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 ---------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ---------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|||||++++.+..
T Consensus 102 ~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 102 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 6789999999999998875543
No 59
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.01 E-value=3.7e-10 Score=86.13 Aligned_cols=61 Identities=18% Similarity=0.278 Sum_probs=52.3
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch--------H---------------------
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL--------Q--------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl--------~--------------------- 49 (171)
++++.+|||||| +|+|+|+|+.+++.|++++...++ .
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 568999999998 999999999999999998765543 1
Q ss_pred --------------HHHHHHHhccccCcEEEEEcccCC
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQFSSVP 73 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~i~~~ 73 (171)
.+++++.++|||||++++.+....
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 578999999999999999876543
No 60
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.01 E-value=1.3e-09 Score=91.76 Aligned_cols=71 Identities=15% Similarity=0.131 Sum_probs=58.0
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHH-------Hhch-----H-----
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVK-------EAGL-----Q----- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~-------~~gl-----~----- 49 (171)
.+..+++.+++++|++|||||| +|+|||+|+++++.|+++++ ..|+ .
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 5788999999999999999998 59999999999999987542 2232 1
Q ss_pred ----------------------------HHHHHHHhccccCcEEEEEcccCC
Q 042963 50 ----------------------------QFFGCCESLLAEHGLLLLQFSSVP 73 (171)
Q Consensus 50 ----------------------------~~~~~~~r~LkpgG~l~i~~i~~~ 73 (171)
..+++++++|||||++++.....+
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 556789999999999998754443
No 61
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.01 E-value=6.5e-10 Score=83.20 Aligned_cols=69 Identities=19% Similarity=0.178 Sum_probs=57.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------- 49 (171)
++...+....+++|++|||+|| +|+|+|+|+++++.|+++++..++.
T Consensus 10 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 89 (197)
T 3eey_A 10 GQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY 89 (197)
T ss_dssp HHHHHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh
Confidence 3455666778999999999997 7999999999999999998875541
Q ss_pred ------------------------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 ------------------------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ------------------------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|||||++++..+.
T Consensus 90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 3688999999999999987643
No 62
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.01 E-value=6.9e-10 Score=91.16 Aligned_cols=105 Identities=17% Similarity=0.116 Sum_probs=75.3
Q ss_pred HHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
++.+++.++++++.+|||||| +++++|+ +++++.|++++...++.
T Consensus 171 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 249 (374)
T 1qzz_A 171 YEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTA 249 (374)
T ss_dssp THHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCE
T ss_pred HHHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCC
Confidence 356788888999999999998 8999999 99999999998765432
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcc--cCCCcccccccCccchhh--hcccCCCcCCCHHHHHHHH
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFS--SVPDQCYDEHRLSPGFMK--EYVFPGGCLPSLNRITSTM 107 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i--~~~~~~~~~~~~~~~~~~--~~ifp~~~lp~~~~l~~~~ 107 (171)
.++++++++|||||++++.+. ..++..... ...+.. ...++++...+.+++.+.+
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll 326 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRF---FSTLLDLRMLTFMGGRVRTRDEVVDLA 326 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HH---HHHHHHHHHHHHHSCCCCCHHHHHHHH
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcc---hhhhcchHHHHhCCCcCCCHHHHHHHH
Confidence 678999999999999998876 433211000 001111 1123456778899999999
Q ss_pred HhcCC
Q 042963 108 TSSSR 112 (171)
Q Consensus 108 ~~~g~ 112 (171)
+++||
T Consensus 327 ~~aGf 331 (374)
T 1qzz_A 327 GSAGL 331 (374)
T ss_dssp HTTTE
T ss_pred HHCCC
Confidence 98883
No 63
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.00 E-value=5.8e-10 Score=86.21 Aligned_cols=89 Identities=12% Similarity=0.231 Sum_probs=65.6
Q ss_pred CCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhch---H-------------------------
Q 042963 13 VSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGL---Q------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl---~------------------------- 49 (171)
.+++.+|||||| +|+|+|+|+++++.|++++...+. .
T Consensus 77 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 77 KTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 347899999998 899999999999999998765421 1
Q ss_pred ---------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.+++++.++|||||++++.+....... +... ..+....+..++.+.++++|+
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~~l~~aGf 217 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV---------ILDD--VDSSVCRDLDVVRRIICSAGL 217 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSE---------EEET--TTTEEEEBHHHHHHHHHHTTC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcc---------eecc--cCCcccCCHHHHHHHHHHcCC
Confidence 578999999999999999765443210 0000 111233478999999999984
No 64
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.00 E-value=2.3e-09 Score=87.89 Aligned_cols=104 Identities=14% Similarity=0.101 Sum_probs=74.9
Q ss_pred HHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
++.+++.++++++.+|||||| +|+++|+ +++++.|++++++.++.
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 257 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA 257 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC
Confidence 467888899999999999998 8999999 99999999998765532
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcc--cCCCcC----CCHHHHHH
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYV--FPGGCL----PSLNRITS 105 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~i--fp~~~l----p~~~~l~~ 105 (171)
.++++++++|||||++++.+...++.... ....+. .++ ..++.. .+.+++.+
T Consensus 258 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~---~~~~~~-~~~~~~~~g~~~~~~~t~~e~~~ 333 (359)
T 1x19_A 258 DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENP---NFDYLS-HYILGAGMPFSVLGFKEQARYKE 333 (359)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSC---CHHHHH-HHGGGGGSSCCCCCCCCGGGHHH
T ss_pred CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCc---hHHHHH-HHHHhcCCCCcccCCCCHHHHHH
Confidence 67899999999999999877665432100 000111 111 122322 67888888
Q ss_pred HHHhcCC
Q 042963 106 TMTSSSR 112 (171)
Q Consensus 106 ~~~~~g~ 112 (171)
.++++||
T Consensus 334 ll~~aGf 340 (359)
T 1x19_A 334 ILESLGY 340 (359)
T ss_dssp HHHHHTC
T ss_pred HHHHCCC
Confidence 8888874
No 65
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.00 E-value=1.2e-09 Score=89.02 Aligned_cols=106 Identities=13% Similarity=0.062 Sum_probs=77.5
Q ss_pred HHHHHHHcCCCC-CCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 4 VSFLIEKARVSK-GHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~-g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
+..+++.+++.+ +.+|||||| +++++|+ +++++.|+++++..++.
T Consensus 167 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 167 MVDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT
T ss_pred HHHHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC
Confidence 346788888888 999999998 8999999 88999999987765432
Q ss_pred ----------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhh---hcccCCCcCCCHHHHH
Q 042963 50 ----------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMK---EYVFPGGCLPSLNRIT 104 (171)
Q Consensus 50 ----------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~---~~ifp~~~lp~~~~l~ 104 (171)
.++++++++|||||++++.+...++..... ....+.. ....+++...+.+++.
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~~e~~ 323 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTP--ALSADFSLHMMVNTNHGELHPTPWIA 323 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSS--HHHHHHHHHHHHHSTTCCCCCHHHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCC--chHHHhhHHHHhhCCCCCcCCHHHHH
Confidence 688999999999999999876655432100 0011111 1124567778888999
Q ss_pred HHHHhcCC
Q 042963 105 STMTSSSR 112 (171)
Q Consensus 105 ~~~~~~g~ 112 (171)
+.++++||
T Consensus 324 ~ll~~aGf 331 (352)
T 3mcz_A 324 GVVRDAGL 331 (352)
T ss_dssp HHHHHTTC
T ss_pred HHHHHCCC
Confidence 98988884
No 66
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.00 E-value=3.9e-10 Score=85.58 Aligned_cols=97 Identities=16% Similarity=0.115 Sum_probs=70.4
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------- 49 (171)
.++.+++.+.++++.+|||||| +|+|+|+|+++++.|+++....++.
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 144 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPL 144 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGG
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCC
Confidence 3567888899999999999997 7999999999999999987665432
Q ss_pred -------------HHHHHHHhccccCcEEEEEcccCCCcccccc-cCccchhhhcccCCCcCCCH
Q 042963 50 -------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEH-RLSPGFMKEYVFPGGCLPSL 100 (171)
Q Consensus 50 -------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~-~~~~~~~~~~ifp~~~lp~~ 100 (171)
.+.+++.++|||||++++.....+ ...... +....|..+++++..++|..
T Consensus 145 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~ 208 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGRYL-QRLVLAEKRGDEIIIKDCGPVAFVPLV 208 (215)
T ss_dssp CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEESSSS-EEEEEEEEETTEEEEEEEEEECCCBCB
T ss_pred CCeeEEEECCchHHHHHHHHHHcCCCcEEEEEECCCC-cEEEEEEEeCCEEEEEEeccEEEEecc
Confidence 344789999999999998764433 221111 22234656666765566643
No 67
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.00 E-value=4.4e-10 Score=88.58 Aligned_cols=85 Identities=14% Similarity=0.101 Sum_probs=60.8
Q ss_pred cCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHH--------------------hchH-------
Q 042963 11 ARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKE--------------------AGLQ------- 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~--------------------~gl~------- 49 (171)
+.++++.+|||||| +|||||+|+.|++.|+++... .++.
T Consensus 64 ~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 64 LKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp HTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred ccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 34578999999998 899999999999999876531 1111
Q ss_pred ----------------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHH
Q 042963 50 ----------------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLN 101 (171)
Q Consensus 50 ----------------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~ 101 (171)
.+++++.++|||||++++.++...... ... .| +..+.+
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~-----~~g-------~~--~~~~~~ 209 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK-----HAG-------PP--FYVPSA 209 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS-----CCC-------SS--CCCCHH
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc-----CCC-------CC--CCCCHH
Confidence 689999999999999976554432210 000 01 225688
Q ss_pred HHHHHHHh
Q 042963 102 RITSTMTS 109 (171)
Q Consensus 102 ~l~~~~~~ 109 (171)
++...+++
T Consensus 210 el~~~l~~ 217 (252)
T 2gb4_A 210 ELKRLFGT 217 (252)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhhC
Confidence 99988876
No 68
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.99 E-value=1.2e-09 Score=84.60 Aligned_cols=66 Identities=26% Similarity=0.385 Sum_probs=56.0
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
++.+++.+..+++.+|||||| +|+|+|+|++|++.|+++++..++.
T Consensus 30 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v 109 (252)
T 1wzn_A 30 VEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAV 109 (252)
T ss_dssp HHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEE
T ss_pred HHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEE
Confidence 456677777788999999998 8999999999999999998754421
Q ss_pred ----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.++++++++|||||++++..
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 67889999999999998754
No 69
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.99 E-value=2.8e-09 Score=79.95 Aligned_cols=93 Identities=18% Similarity=0.245 Sum_probs=66.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
+..+++. ++++ +|||||| +|+|+|+|+++++.|+++.+..+..
T Consensus 21 l~~~~~~--~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 97 (202)
T 2kw5_A 21 LVSVANQ--IPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEG 97 (202)
T ss_dssp HHHHHHH--SCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSE
T ss_pred HHHHHHh--CCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccE
Confidence 3445554 4677 9999998 8999999999999999998654321
Q ss_pred --------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHH
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMT 108 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~ 108 (171)
.+++++.++|||||++++.+.......+. ...+ .......+..++.+.++
T Consensus 98 v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~l~~~l~ 161 (202)
T 2kw5_A 98 IVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYN---TGGP------KDLDLLPKLETLQSELP 161 (202)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGT---SCCS------SSGGGCCCHHHHHHHCS
T ss_pred EEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCC---CCCC------CcceeecCHHHHHHHhc
Confidence 67899999999999999987654432110 0000 00124578888888887
No 70
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.99 E-value=1.4e-09 Score=87.75 Aligned_cols=58 Identities=12% Similarity=0.138 Sum_probs=49.0
Q ss_pred CCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhc-------------------------h----H
Q 042963 14 SKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAG-------------------------L----Q 49 (171)
Q Consensus 14 ~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~g-------------------------l----~ 49 (171)
.+|.+|||||| +|||||+|++|++.|++++...+ + .
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46899999999 79999999999999999875432 0 0
Q ss_pred -----------------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 -----------------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 -----------------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.++++++++|||||++++.+..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 6789999999999999987754
No 71
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.98 E-value=8.9e-10 Score=89.34 Aligned_cols=102 Identities=14% Similarity=0.112 Sum_probs=74.1
Q ss_pred HHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 6 FLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
.+++.++++++.+|||||| +++++|+ +++++.|++++.+.++.
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~ 238 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGG 238 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSE
T ss_pred HHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcE
Confidence 3455667788899999998 7999999 99999999988765532
Q ss_pred ----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||++++.+...++. .. ....++. -....++...+.+++.+.++++||
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~-~~~~d~~-~~~~~~~~~~t~~e~~~ll~~aGf 313 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--HA-GTGMDLR-MLTYFGGKERSLAELGELAAQAGL 313 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-----C-CHHHHHH-HHHHHSCCCCCHHHHHHHHHHTTE
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--Cc-cHHHHHH-HHhhCCCCCCCHHHHHHHHHHCCC
Confidence 68999999999999999987665442 00 0000111 012345677888999999998883
No 72
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.98 E-value=2.3e-10 Score=89.73 Aligned_cols=100 Identities=12% Similarity=0.107 Sum_probs=70.7
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHH---------hc-----hH------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKE---------AG-----LQ------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~---------~g-----l~------ 49 (171)
.+.+++.++++++.+|||||| +|+|+|+|+.|++.|+++..- .. ++
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 102 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISIL 102 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEES
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcc
Confidence 567788899999999999998 899999999999988765310 00 00
Q ss_pred ---------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcc-----cCCCcCCCHHHHHHHHHhcCC
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYV-----FPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~i-----fp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|| ||++++.+....... ..|...+. ..+..+++..++. .++++||
T Consensus 103 ~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF 170 (261)
T 3ege_A 103 AIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQ-------RIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTK 170 (261)
T ss_dssp CGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCC-------CCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHC
T ss_pred hHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhH-------HHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCC
Confidence 78999999999 999988776442211 11211110 1113467788888 9999885
No 73
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.97 E-value=1.6e-09 Score=86.06 Aligned_cols=40 Identities=13% Similarity=0.042 Sum_probs=31.8
Q ss_pred HHHHHHHcCC--CCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHH
Q 042963 4 VSFLIEKARV--SKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKV 43 (171)
Q Consensus 4 ~~~ll~~l~l--~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~ 43 (171)
++.+.+.+.. .++.+|||||| +|+|||+|++|++.|++++
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~ 114 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWL 114 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHH
Confidence 3455555533 48899999998 8999999999999998743
No 74
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.97 E-value=1.6e-09 Score=89.92 Aligned_cols=97 Identities=18% Similarity=0.157 Sum_probs=68.6
Q ss_pred CCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-----c----------------h------
Q 042963 13 VSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-----G----------------L------ 48 (171)
Q Consensus 13 l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-----g----------------l------ 48 (171)
+.++.+|||||| +|+|+|+|++|++.|+++++.. | +
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 779999999998 7999999999999999886532 1 1
Q ss_pred H----------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHH
Q 042963 49 Q----------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITST 106 (171)
Q Consensus 49 ~----------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~ 106 (171)
. .++++++++|||||++++.++.......... ...... +....+...+..++.+.
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~l 237 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAA-QQDPIL--YGECLGGALYLEDFRRL 237 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHH-HHCHHH--HHTTCTTCCBHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhH-hhhHHH--hhcccccCCCHHHHHHH
Confidence 1 7899999999999999998765443211000 011111 11222345678999999
Q ss_pred HHhcCC
Q 042963 107 MTSSSR 112 (171)
Q Consensus 107 ~~~~g~ 112 (171)
++++||
T Consensus 238 l~~aGF 243 (383)
T 4fsd_A 238 VAEAGF 243 (383)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 999985
No 75
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.96 E-value=5.7e-10 Score=83.80 Aligned_cols=88 Identities=11% Similarity=0.089 Sum_probs=63.6
Q ss_pred CCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhc--------hH-----------------------
Q 042963 15 KGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAG--------LQ----------------------- 49 (171)
Q Consensus 15 ~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~g--------l~----------------------- 49 (171)
++.+|||||| +|+|+|+|++|++.|+++..... +.
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGEL 120 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHH
Confidence 3899999998 89999999999999998732111 00
Q ss_pred -HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 -QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 -~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||++++......... .+. .. .......+..++.+.++++|+
T Consensus 121 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~--------~~~-~~-~~~~~~~~~~~~~~~l~~~Gf 174 (203)
T 3h2b_A 121 PDALVALRMAVEDGGGLLMSFFSGPSLE--------PMY-HP-VATAYRWPLPELAQALETAGF 174 (203)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECCSSCE--------EEC-CS-SSCEEECCHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHcCCCcEEEEEEccCCchh--------hhh-ch-hhhhccCCHHHHHHHHHHCCC
Confidence 789999999999999999775443211 000 00 111235678999999999984
No 76
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.96 E-value=3.1e-09 Score=78.15 Aligned_cols=69 Identities=10% Similarity=0.035 Sum_probs=55.9
Q ss_pred HHHHHHHcC-CCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKAR-VSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~-l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.+.+++.+. +.++.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 19 ~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (177)
T 2esr_A 19 RGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLT 98 (177)
T ss_dssp HHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBC
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhc
Confidence 456677776 789999999998 8999999999999999998766532
Q ss_pred ------------------HHHHHHH--hccccCcEEEEEcccC
Q 042963 50 ------------------QFFGCCE--SLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ------------------~~~~~~~--r~LkpgG~l~i~~i~~ 72 (171)
..++.+. ++|||||++++.+...
T Consensus 99 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 99 GRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 4456665 9999999999876544
No 77
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.95 E-value=1.6e-09 Score=88.64 Aligned_cols=103 Identities=16% Similarity=0.197 Sum_probs=74.6
Q ss_pred HHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
+.+++.++++++.+|||||| +++++|+ +++++.|+++++..++.
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D 251 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKAD 251 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCcc
Confidence 56788889999999999998 7999999 99999999998765432
Q ss_pred -----------------HHHHHHHhccccCcEEEEEccc-CCCcccccccCccchhhhc--ccCCCcCCCHHHHHHHHHh
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSS-VPDQCYDEHRLSPGFMKEY--VFPGGCLPSLNRITSTMTS 109 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~-~~~~~~~~~~~~~~~~~~~--ifp~~~lp~~~~l~~~~~~ 109 (171)
.++++++++|||||++++.+.. .++.... ....++..+ ...++...+.+++.+.+++
T Consensus 252 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (360)
T 1tw3_A 252 AIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFN---EQFTELDLRMLVFLGGALRTREKWDGLAAS 328 (360)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCS---HHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred EEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCc---chhhhccHHHhhhcCCcCCCHHHHHHHHHH
Confidence 5789999999999999988765 3321100 000111111 1335666778888888888
Q ss_pred cC
Q 042963 110 SS 111 (171)
Q Consensus 110 ~g 111 (171)
+|
T Consensus 329 aG 330 (360)
T 1tw3_A 329 AG 330 (360)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 78
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.95 E-value=2e-09 Score=83.01 Aligned_cols=69 Identities=17% Similarity=0.200 Sum_probs=56.8
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
+..++...+.+++.+|||||| +|++||+|+++++.|++++++.|+.
T Consensus 45 l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~ 124 (221)
T 3dr5_A 45 LTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSR 124 (221)
T ss_dssp HHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGG
T ss_pred HHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHH
Confidence 455566667777789999997 7999999999999999998765431
Q ss_pred -------------------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 -------------------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++++.++|||||.+++.++..
T Consensus 125 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 125 LANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp SCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred hcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 68999999999999999876543
No 79
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.95 E-value=3.1e-09 Score=78.44 Aligned_cols=69 Identities=19% Similarity=0.297 Sum_probs=58.6
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhc-----hH--------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAG-----LQ-------------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~g-----l~-------------- 49 (171)
-.+.+++.+.++++.+|||||| +|+|+|+|+++++.|+++++..+ +.
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 119 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRK 119 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSC
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCC
Confidence 3567889999999999999998 89999999999999999986543 21
Q ss_pred ------------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|+|||++++.+..
T Consensus 120 ~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 6788899999999999987643
No 80
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.94 E-value=2.1e-09 Score=83.52 Aligned_cols=96 Identities=14% Similarity=0.116 Sum_probs=66.9
Q ss_pred HHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhc-----------------------
Q 042963 6 FLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAG----------------------- 47 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~g----------------------- 47 (171)
.++.. +..++.+|||||| +|+|+|+|+.+++.|++++...+
T Consensus 48 ~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (265)
T 2i62_A 48 KIFCL-GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGP 126 (265)
T ss_dssp HHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHH
T ss_pred HHhcc-cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchH
Confidence 34433 6678899999998 79999999999999988764321
Q ss_pred ---------h-H----------------------------------------HHHHHHHhccccCcEEEEEcccCCCccc
Q 042963 48 ---------L-Q----------------------------------------QFFGCCESLLAEHGLLLLQFSSVPDQCY 77 (171)
Q Consensus 48 ---------l-~----------------------------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~ 77 (171)
+ . .++++++++|||||++++.+..... .+
T Consensus 127 ~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~ 205 (265)
T 2i62_A 127 EKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-YY 205 (265)
T ss_dssp HHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EE
T ss_pred HHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-eE
Confidence 2 1 5678899999999999987643321 11
Q ss_pred ccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 78 DEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 78 ~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
. .. ...+. ....+.+++.+.++++|+
T Consensus 206 ~---~~-----~~~~~-~~~~~~~~~~~~l~~aGf 231 (265)
T 2i62_A 206 M---IG-----EQKFS-SLPLGWETVRDAVEEAGY 231 (265)
T ss_dssp E---ET-----TEEEE-CCCCCHHHHHHHHHHTTC
T ss_pred E---cC-----Ccccc-ccccCHHHHHHHHHHCCC
Confidence 0 00 00011 123567899999999985
No 81
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.94 E-value=2.1e-09 Score=83.58 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=58.6
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------- 49 (171)
.+..+++.+++++|++|||+|| +|+|+|+|+++++.|+++++..++.
T Consensus 81 ~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (255)
T 3mb5_A 81 DAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE 160 (255)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC
T ss_pred HHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC
Confidence 3567888999999999999998 7999999999999999998776543
Q ss_pred --------------HHHHHHHhccccCcEEEEEc
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++..
T Consensus 161 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 161 ENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 58899999999999998764
No 82
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.94 E-value=5.6e-10 Score=86.22 Aligned_cols=39 Identities=18% Similarity=0.079 Sum_probs=32.7
Q ss_pred HHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHH
Q 042963 7 LIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKE 45 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~ 45 (171)
.+..+.++++.+|||||| +|+|||+|++|++.|+++++.
T Consensus 52 ~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~ 105 (236)
T 1zx0_A 52 ALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR 105 (236)
T ss_dssp HHHHHHTTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGG
T ss_pred HHHhhcCCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 333344789999999998 899999999999999998754
No 83
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.94 E-value=2.4e-10 Score=89.07 Aligned_cols=66 Identities=11% Similarity=0.108 Sum_probs=54.7
Q ss_pred HHHHHHHHcCCCC-CCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHh------ch------------
Q 042963 3 KVSFLIEKARVSK-GHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEA------GL------------ 48 (171)
Q Consensus 3 k~~~ll~~l~l~~-g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~------gl------------ 48 (171)
|++.+++.+++.+ |.+|||||| +|+|||+|++|++.|+++..+. ++
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR 103 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC
Confidence 8899999998764 679999998 8999999999999987753321 11
Q ss_pred -H------------HHHHHHHhccccCcEEEEE
Q 042963 49 -Q------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 49 -~------------~~~~~~~r~LkpgG~l~i~ 68 (171)
. .++++++++|||||++++.
T Consensus 104 ~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 104 PSFTSIDVSFISLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CCEEEEEEEhhhHHHHHHHHHHhccCCCEEEEE
Confidence 1 7799999999999999984
No 84
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.93 E-value=6e-09 Score=77.68 Aligned_cols=59 Identities=12% Similarity=0.112 Sum_probs=50.4
Q ss_pred CCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------------
Q 042963 14 SKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~----------------------------- 49 (171)
.+|.+|||+|| +|+|||+|+++++.|+++++..++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 68899999998 7999999999999999998776532
Q ss_pred ---------HHHHHHHh--ccccCcEEEEEcccC
Q 042963 50 ---------QFFGCCES--LLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ---------~~~~~~~r--~LkpgG~l~i~~i~~ 72 (171)
..++.+.+ +|||||++++.....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 56788888 999999999976443
No 85
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=9.4e-10 Score=85.02 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=51.2
Q ss_pred CCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH----------------------------
Q 042963 12 RVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------------------- 49 (171)
Q Consensus 12 ~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~---------------------------- 49 (171)
.++++.+|||||| +|+|||+|+.|++.|+++....++.
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 3689999999998 8999999999999999875321111
Q ss_pred -----------HHHHHHHhccccCcEEEEEcccCC
Q 042963 50 -----------QFFGCCESLLAEHGLLLLQFSSVP 73 (171)
Q Consensus 50 -----------~~~~~~~r~LkpgG~l~i~~i~~~ 73 (171)
.++++++++|||||++++.++...
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 788999999999999998876544
No 86
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.93 E-value=1e-09 Score=84.13 Aligned_cols=70 Identities=16% Similarity=0.271 Sum_probs=57.6
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhc-hH------------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAG-LQ------------------ 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~g-l~------------------ 49 (171)
.++.+++.++++++.+|||||| +|+|+|+|+++++.|+++....+ +.
T Consensus 58 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 137 (231)
T 1vbf_A 58 LGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDR 137 (231)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEE
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccE
Confidence 3567889999999999999998 89999999999999999875432 11
Q ss_pred --------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 --------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+.+++.++|||||++++.....
T Consensus 138 v~~~~~~~~~~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 138 VVVWATAPTLLCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp EEESSBBSSCCHHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 34578999999999999875433
No 87
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.93 E-value=2.2e-09 Score=83.88 Aligned_cols=67 Identities=7% Similarity=0.118 Sum_probs=55.5
Q ss_pred HHHHHc-CCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 6 FLIEKA-RVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 6 ~ll~~l-~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.++..+ .+.++.+|||||| +|+|||+|+++++.|++++++.|+.
T Consensus 53 ~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~ 132 (248)
T 3tfw_A 53 QFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG 132 (248)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC
T ss_pred HHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC
Confidence 344443 6778999999997 8999999999999999998766542
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++++.++|||||++++.++..
T Consensus 133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 133 ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 68899999999999999876543
No 88
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.92 E-value=2.7e-09 Score=84.67 Aligned_cols=68 Identities=18% Similarity=0.202 Sum_probs=57.1
Q ss_pred HHHHHHHc-CCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------
Q 042963 4 VSFLIEKA-RVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------- 49 (171)
Q Consensus 4 ~~~ll~~l-~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------- 49 (171)
++.+++.+ .+.++.+|||||| +|+|+|+|+.|++.|++++...+..
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 89 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDK 89 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSC
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCC
Confidence 45566665 7889999999998 7999999999999999998754321
Q ss_pred -----------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.++++++++|||||++++.+..
T Consensus 90 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 90 YDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 7899999999999999987654
No 89
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.92 E-value=1.9e-09 Score=86.05 Aligned_cols=107 Identities=15% Similarity=0.129 Sum_probs=71.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-----chH------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-----GLQ------------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-----gl~------------ 49 (171)
+-..+..+..+++.+|||||| +|+|||+|+.|++.|+++++.. ++.
T Consensus 25 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~ 104 (299)
T 3g5t_A 25 FYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFL 104 (299)
T ss_dssp HHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGG
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcc
Confidence 334455555679999999998 8999999999999999987653 110
Q ss_pred -------------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhccc----CCCcC--C
Q 042963 50 -------------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVF----PGGCL--P 98 (171)
Q Consensus 50 -------------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~if----p~~~l--p 98 (171)
.+++++.++|||||.+++.++..+... ........+.++.+ .+.+. |
T Consensus 105 ~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~w~~p 182 (299)
T 3g5t_A 105 GADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWGYADPIFP--DYPEFDDLMIEVPYGKQGLGPYWEQP 182 (299)
T ss_dssp CTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEEEECT--TCGGGTTHHHHHHHCTTTTGGGSCTT
T ss_pred ccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEecCCcccc--CcHHHHHHHHHhccCcccccchhhch
Confidence 588999999999999998554432110 00112223333321 12233 6
Q ss_pred CHHHHHHHHHhcCC
Q 042963 99 SLNRITSTMTSSSR 112 (171)
Q Consensus 99 ~~~~l~~~~~~~g~ 112 (171)
....+...+++.|+
T Consensus 183 ~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 183 GRSRLRNMLKDSHL 196 (299)
T ss_dssp HHHHHHTTTTTCCC
T ss_pred hhHHHHHhhhccCC
Confidence 66677777888876
No 90
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.91 E-value=1e-09 Score=82.69 Aligned_cols=65 Identities=15% Similarity=0.145 Sum_probs=53.5
Q ss_pred HHHHHcC--CCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 6 FLIEKAR--VSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 6 ~ll~~l~--l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
.+++.+. ++++.+|||||| +|+|+|+|+.+++.|+++++..++.
T Consensus 49 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~ 128 (205)
T 3grz_A 49 LAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDL 128 (205)
T ss_dssp HHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEE
T ss_pred HHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceE
Confidence 3444444 789999999998 8999999999999999998766532
Q ss_pred -----------HHHHHHHhccccCcEEEEEcc
Q 042963 50 -----------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 -----------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++++.++|||||++++.++
T Consensus 129 i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 129 IVANILAEILLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp EEEESCHHHHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred EEECCcHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 567888999999999998643
No 91
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.91 E-value=7.4e-10 Score=85.57 Aligned_cols=97 Identities=19% Similarity=0.167 Sum_probs=69.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.++.+++.++++++++|||||| +|+|+|+|+++++.|+++.+..++.
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAP 158 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCC
Confidence 3567888899999999999998 7999999999999999998765432
Q ss_pred -----------HHHHHHHhccccCcEEEEEcccCCC-cccccc-cCccchhhhcccCCCcCCC
Q 042963 50 -----------QFFGCCESLLAEHGLLLLQFSSVPD-QCYDEH-RLSPGFMKEYVFPGGCLPS 99 (171)
Q Consensus 50 -----------~~~~~~~r~LkpgG~l~i~~i~~~~-~~~~~~-~~~~~~~~~~ifp~~~lp~ 99 (171)
.+.+++.++|||||++++..-.... ...... +....|..+.+++..++|.
T Consensus 159 fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~p~ 221 (235)
T 1jg1_A 159 YDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDGIKIKNHGGVAFVPL 221 (235)
T ss_dssp EEEEEECSBBSSCCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEEETTEEEEEEEEEECCCBC
T ss_pred ccEEEECCcHHHHHHHHHHhcCCCcEEEEEEecCCCccEEEEEEEeCCeEEEEEeccEEEEEc
Confidence 3457899999999999986543322 111111 2223455566666666664
No 92
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.91 E-value=2.2e-09 Score=83.85 Aligned_cols=61 Identities=16% Similarity=0.192 Sum_probs=49.0
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch----------H-------------------
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL----------Q------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl----------~------------------- 49 (171)
++++.+|||||| +|+|+|+|+++++.|+++.....+ .
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHH
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCCH
Confidence 457799999998 899999999999999987532110 0
Q ss_pred ----HHHHHHHhccccCcEEEEEcccCC
Q 042963 50 ----QFFGCCESLLAEHGLLLLQFSSVP 73 (171)
Q Consensus 50 ----~~~~~~~r~LkpgG~l~i~~i~~~ 73 (171)
.++++++++|||||++++..+..+
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 155 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVEPWWFP 155 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeccCh
Confidence 568999999999999999765443
No 93
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.91 E-value=6.6e-10 Score=87.87 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=49.0
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------- 49 (171)
+.+.+.. ..+.+|||||| +|+|||+|++|++.|+++. ++.
T Consensus 31 ~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~---~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 31 RWLGEVA--PARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHP---RVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp HHHHHHS--SCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCT---TEEEEECCTTCCCCCSSCEEEEEE
T ss_pred HHHHHhc--CCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcC---CceeehhhhhhhcccCCcccEEEE
Confidence 3344443 35679999998 9999999999999887542 221
Q ss_pred ----------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 ----------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ----------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.++++++|+|||||++++.+...
T Consensus 106 ~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 106 AQAMHWFDLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp CSCCTTCCHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred eeehhHhhHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 88999999999999999876544
No 94
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.90 E-value=2.4e-09 Score=84.72 Aligned_cols=67 Identities=15% Similarity=0.153 Sum_probs=55.8
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------- 49 (171)
..+++.+...++.+|||||| +|+|+|+|+.+++.|+++++..++.
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~ 189 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIV 189 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEE
T ss_pred HHHHHHhhccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEE
Confidence 44566666668999999998 8999999999999999998766432
Q ss_pred --------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|||||++++.+..
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 190 STVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp ECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 7889999999999998875543
No 95
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.89 E-value=6.2e-09 Score=88.06 Aligned_cols=68 Identities=13% Similarity=0.056 Sum_probs=56.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHH-------HHHHHHhch--H--------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYT-------EMKVKEAGL--Q-------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A-------~~~~~~~gl--~-------- 49 (171)
.++.+++.+++++|++|||||| +|+|||+|+++++.| +++++..|+ .
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD 309 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 309 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC
Confidence 4678899999999999999998 699999999999998 777654331 0
Q ss_pred ------------------------------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ------------------------------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ------------------------------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++++.++|||||++++...
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred ccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 556799999999999998753
No 96
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.89 E-value=5.7e-09 Score=76.86 Aligned_cols=65 Identities=17% Similarity=0.223 Sum_probs=55.3
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch-H--------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL-Q-------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl-~-------------------- 49 (171)
+.+++.+++.++.+|||||| +|+|+|+|+++++.|+++++..++ .
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDID 102 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCC
Confidence 45678889999999999998 899999999999999998776544 1
Q ss_pred ------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|+|||++++..
T Consensus 103 ~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 103 IAVVGGSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp EEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 67888889999999988754
No 97
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.88 E-value=6.2e-09 Score=85.66 Aligned_cols=105 Identities=8% Similarity=0.010 Sum_probs=71.0
Q ss_pred HHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------
Q 042963 7 LIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------- 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------- 49 (171)
+++.+...++.+|||||| +|+++|+ +++++.|++++++.++.
T Consensus 171 ~l~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~ 249 (363)
T 3dp7_A 171 ALEIVFSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGF 249 (363)
T ss_dssp HHHHHGGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCC
T ss_pred HHHHhcccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCc
Confidence 344443357789999998 8999999 99999999987643321
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhh----cccCCCcCCCHHHHHHHH
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKE----YVFPGGCLPSLNRITSTM 107 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~----~ifp~~~lp~~~~l~~~~ 107 (171)
.++++++++|||||++++.+.................... ....++...+.+++.+.+
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll 329 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCI 329 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHH
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHH
Confidence 6789999999999999998766554321100000000111 112335567899999999
Q ss_pred HhcCC
Q 042963 108 TSSSR 112 (171)
Q Consensus 108 ~~~g~ 112 (171)
+++|+
T Consensus 330 ~~AGf 334 (363)
T 3dp7_A 330 ENAGL 334 (363)
T ss_dssp HTTTE
T ss_pred HHcCC
Confidence 99984
No 98
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.88 E-value=1.8e-09 Score=82.87 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=54.9
Q ss_pred HHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
+.+.+.+...++.+|||||| +|+|+|+|+++++.|+++....++.
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 112 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAY 112 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEE
Confidence 45777788889999999997 8999999999999999876432221
Q ss_pred ------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.++++++++|||||++++..
T Consensus 113 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 78999999999999999865
No 99
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.88 E-value=4.1e-09 Score=79.53 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=66.7
Q ss_pred HHHHHHcCCCCCCeEEEeCC------------eEEEEcCCHHHHHHHHHHHHHhc-----h----------H--------
Q 042963 5 SFLIEKARVSKGHDVLFLRL------------DYTGITLSEEQLKYTEMKVKEAG-----L----------Q-------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc------------~VtgId~S~~~~~~A~~~~~~~g-----l----------~-------- 49 (171)
..+++.+.. ++.+|||||| +|+|+|+|+++++.|+++..... + +
T Consensus 27 ~~~l~~~~~-~~~~vLdiG~G~G~~~~~l~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 105 (211)
T 2gs9_A 27 ERALKGLLP-PGESLLEVGAGTGYWLRRLPYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTL 105 (211)
T ss_dssp HHHHHTTCC-CCSEEEEETCTTCHHHHHCCCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCT
T ss_pred HHHHHHhcC-CCCeEEEECCCCCHhHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChh
Confidence 344555543 8999999998 89999999999999998741110 0 0
Q ss_pred -------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHH
Q 042963 50 -------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMT 108 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~ 108 (171)
.+++++.++|||||++++.+...... +..............+....+.+.+++.+.++
T Consensus 106 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 106 EFVEDVERVLLEARRVLRPGGALVVGVLEALSP-WAALYRRLGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp TTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSH-HHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCc-HHHHHHHHhhccCccccccccCCHHHHHHHhc
Confidence 78999999999999999977554321 11000000000000122345678999999998
No 100
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.88 E-value=4.7e-09 Score=80.27 Aligned_cols=58 Identities=17% Similarity=0.181 Sum_probs=46.0
Q ss_pred cCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh-c----------h------H--------
Q 042963 11 ARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA-G----------L------Q-------- 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~-g----------l------~-------- 49 (171)
+.+++|++|||||| +|+|||+|++|++.+.++++.. + . .
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 132 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ 132 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEE
Confidence 56889999999998 7999999999876665555421 0 0 0
Q ss_pred ---------HHHHHHHhccccCcEEEEE
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~ 68 (171)
.++++++++|||||++++.
T Consensus 133 ~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 133 DIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 3489999999999999986
No 101
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.87 E-value=5.2e-09 Score=84.73 Aligned_cols=105 Identities=7% Similarity=0.018 Sum_probs=72.4
Q ss_pred HHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
+..+++.+++++ .+|||||| +++++|+ +++++.|+++++..++.
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 234 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNG 234 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSC
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCC
Confidence 456778888888 99999998 7999999 99999999987654431
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcC
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSS 111 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g 111 (171)
.++++++++|||||++++.+...+...........++. -....++...+.+++.+.++++|
T Consensus 235 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~e~~~ll~~aG 313 (334)
T 2ip2_A 235 DIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVH-LFMACAGRHRTTEEVVDLLGRGG 313 (334)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHH-HHHHHSCCCCBHHHHHHHHHHTT
T ss_pred CEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhH-hHhhCCCcCCCHHHHHHHHHHCC
Confidence 67899999999999999987655432100000000000 01122455567778888888777
No 102
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.86 E-value=3.2e-09 Score=80.37 Aligned_cols=66 Identities=14% Similarity=0.054 Sum_probs=53.6
Q ss_pred HHHHH-HHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhc-hH------------------
Q 042963 4 VSFLI-EKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAG-LQ------------------ 49 (171)
Q Consensus 4 ~~~ll-~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~g-l~------------------ 49 (171)
+..++ ..+...++.+|||||| +|+|+|+|+++++.|++++...+ +.
T Consensus 39 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v 118 (216)
T 3ofk_A 39 HTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLI 118 (216)
T ss_dssp HHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEE
T ss_pred HHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEE
Confidence 33444 4677889999999998 89999999999999999875431 11
Q ss_pred ----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++.+
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 55899999999999999865
No 103
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.86 E-value=5.5e-09 Score=79.67 Aligned_cols=67 Identities=10% Similarity=0.161 Sum_probs=54.2
Q ss_pred HHHHHc-CCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 6 FLIEKA-RVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 6 ~ll~~l-~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.++..+ .+.++.+|||||| +|+|+|+|+++++.|+++++..|+.
T Consensus 48 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 127 (223)
T 3duw_A 48 KFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIE 127 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence 344333 5678999999997 7999999999999999998765542
Q ss_pred --------------------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 --------------------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 --------------------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++.+.++|||||.+++.++..
T Consensus 128 ~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 128 NEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred hcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 57889999999999998876543
No 104
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.85 E-value=4.8e-09 Score=80.26 Aligned_cols=64 Identities=23% Similarity=0.185 Sum_probs=50.2
Q ss_pred HHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------
Q 042963 8 IEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------- 49 (171)
...+...++.+|||||| +|+|||+|+++++.|+++++..++.
T Consensus 51 ~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 51 DAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKY 130 (221)
T ss_dssp HHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTS
T ss_pred HHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhc
Confidence 34445678899999997 7999999999999999998766542
Q ss_pred ---------------------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 ---------------------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ---------------------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++.+ ++|||||++++.++..
T Consensus 131 ~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp CCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred CCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 344455 8899999998876553
No 105
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.85 E-value=4e-09 Score=81.46 Aligned_cols=66 Identities=18% Similarity=0.329 Sum_probs=54.6
Q ss_pred HHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 6 FLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
.+...+.+.++.+|||||| +|+|||+|+++++.|+++++..++.
T Consensus 62 ~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 141 (232)
T 3ntv_A 62 LIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDK 141 (232)
T ss_dssp HHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTS
T ss_pred HHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccC
Confidence 4445556678999999998 8999999999999999998765531
Q ss_pred ---------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 ---------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ---------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++.+.++|||||++++..+.
T Consensus 142 ~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 142 VYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp CEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred CccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 6788999999999999886543
No 106
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.85 E-value=5.6e-09 Score=82.45 Aligned_cols=65 Identities=15% Similarity=0.237 Sum_probs=53.1
Q ss_pred HHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhch----H------------------
Q 042963 7 LIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGL----Q------------------ 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl----~------------------ 49 (171)
.+....++++.+|||||| +|+|+|+|+++++.|+++....++ .
T Consensus 56 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 135 (298)
T 1ri5_A 56 CLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFD 135 (298)
T ss_dssp HHHHHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEE
T ss_pred HHHHHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcC
Confidence 333344789999999998 899999999999999999765432 1
Q ss_pred -------------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 -------------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|||||++++....
T Consensus 136 ~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 136 VISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 6788999999999999987643
No 107
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.85 E-value=4.5e-09 Score=81.45 Aligned_cols=57 Identities=12% Similarity=0.183 Sum_probs=48.7
Q ss_pred CCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------------
Q 042963 12 RVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------------- 49 (171)
Q Consensus 12 ~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------------- 49 (171)
.++++.+|||||| +|+|||+|++|++.|+++++..+++
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEE
Confidence 4568999999998 8999999999999999988765431
Q ss_pred --------HHHHHHHhccccCcEEEEE
Q 042963 50 --------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~ 68 (171)
.+++.+.++|||||++++.
T Consensus 147 ~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 147 ARAVARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EECCSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EeccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 6788889999999998774
No 108
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.84 E-value=7e-09 Score=79.26 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=31.2
Q ss_pred CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 14 SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 14 ~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
.++.+|||||| +|+|||+|+++++.|+++++..++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~ 87 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA 87 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC
Confidence 46889999998 899999999999999999877654
No 109
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.84 E-value=2.1e-09 Score=88.17 Aligned_cols=99 Identities=18% Similarity=0.147 Sum_probs=68.8
Q ss_pred HHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
+.+++.+.+.++.+|||||| +|+|||+|+ |++.|+++++..++.
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D 118 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVD 118 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEE
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCcee
Confidence 45667788889999999998 899999995 999999998776652
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcc------cccccCccchhhhcccCCCcCCCHHHHH
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQC------YDEHRLSPGFMKEYVFPGGCLPSLNRIT 104 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~------~~~~~~~~~~~~~~ifp~~~lp~~~~l~ 104 (171)
..+.++.++|||||++++...+..... +.......++.....+|+..++++.++.
T Consensus 119 ~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~~~~~~~~~~w~~~~~~g~d~~~l~~~~ 196 (348)
T 2y1w_A 119 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAA 196 (348)
T ss_dssp EEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHGGGCCSCBTTBCCGGGHHHH
T ss_pred EEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHhhhhccccCcccccccCcccHHHhhhHH
Confidence 567788999999999986432221100 0000001123233478888888877764
No 110
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.83 E-value=4.4e-09 Score=83.24 Aligned_cols=65 Identities=17% Similarity=0.250 Sum_probs=51.9
Q ss_pred HHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-chH-----------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-GLQ----------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-gl~----------------- 49 (171)
+.+++.++++++++|||+|| +|+|+|+|+++++.|+++++.. |..
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQM 179 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCC
Confidence 46778889999999999998 7999999999999999998766 432
Q ss_pred ------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++.+
T Consensus 180 fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 180 YDAVIADIPDPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp EEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 67888999999999998864
No 111
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.82 E-value=1.3e-08 Score=75.11 Aligned_cols=68 Identities=12% Similarity=0.020 Sum_probs=53.2
Q ss_pred HHHHHHHc-CCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKA-RVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l-~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.+.+++.+ ...++.+|||+|| +|+|+|+|+++++.|+++++..++.
T Consensus 32 ~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 111 (187)
T 2fhp_A 32 KESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFY 111 (187)
T ss_dssp HHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHH
Confidence 34556666 4578999999998 8999999999999999988765431
Q ss_pred ---------------------HHHHHH--HhccccCcEEEEEccc
Q 042963 50 ---------------------QFFGCC--ESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ---------------------~~~~~~--~r~LkpgG~l~i~~i~ 71 (171)
..++.+ .++|||||++++..-.
T Consensus 112 ~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 112 EEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp HTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred hcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 445566 7889999999886543
No 112
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.82 E-value=1.3e-09 Score=83.00 Aligned_cols=64 Identities=13% Similarity=0.130 Sum_probs=50.5
Q ss_pred HHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHH----HhchH---------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVK----EAGLQ--------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~----~~gl~--------------- 49 (171)
...++.+.++++.+|||||| +|+|||+|++|++.+.++++ ..++.
T Consensus 17 ~~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 96 (218)
T 3mq2_A 17 DAEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL 96 (218)
T ss_dssp HHHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC
T ss_pred HHHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC
Confidence 45677888999999999998 89999999999886443332 22221
Q ss_pred ------------------------HHHHHHHhccccCcEEEEE
Q 042963 50 ------------------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 ------------------------~~~~~~~r~LkpgG~l~i~ 68 (171)
.++++++++|||||++++.
T Consensus 97 ~~~d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 97 SGVGELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CCEEEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 4678999999999999984
No 113
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.81 E-value=1.1e-08 Score=84.99 Aligned_cols=65 Identities=12% Similarity=0.133 Sum_probs=56.6
Q ss_pred HHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
+.+++.+...++.+|||+|| +|+|||+|+.+++.|+++++..++.
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~ 291 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 291 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTT
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCC
Confidence 45788898889999999998 8999999999999999998876532
Q ss_pred -----------------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -----------------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----------------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++..
T Consensus 292 ~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 46899999999999999853
No 114
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.81 E-value=5.9e-09 Score=82.56 Aligned_cols=65 Identities=22% Similarity=0.255 Sum_probs=52.1
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhc-----------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAG----------------------- 47 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~g----------------------- 47 (171)
+.+.+.+...++.+|||||| +|+|+|+|++|++.|++++...+
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP 126 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc
Confidence 45566677788999999998 89999999999999988652110
Q ss_pred ---------------------------hHHHHHHHHhccccCcEEEEEc
Q 042963 48 ---------------------------LQQFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 48 ---------------------------l~~~~~~~~r~LkpgG~l~i~~ 69 (171)
...++++++++|||||++++..
T Consensus 127 ~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 127 AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 0047889999999999999865
No 115
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.81 E-value=1.1e-08 Score=80.55 Aligned_cols=66 Identities=14% Similarity=0.242 Sum_probs=56.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-c-----hH-----------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-G-----LQ----------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-g-----l~----------- 49 (171)
+..+++.+++++|++|||||| +|+|+|+|+++++.|+++++.. | +.
T Consensus 88 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 88 AAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 457888999999999999998 7999999999999999998765 3 11
Q ss_pred ----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|+|||++++..
T Consensus 168 ~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 168 PDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp CTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 67888888899999888754
No 116
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.81 E-value=9.9e-09 Score=78.38 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=55.9
Q ss_pred HHHHHHHcC--CCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhch--------H-------
Q 042963 4 VSFLIEKAR--VSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGL--------Q------- 49 (171)
Q Consensus 4 ~~~ll~~l~--l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl--------~------- 49 (171)
...+++.+. ++++++|||||| +|+|+|+|+++++.|+++++..++ .
T Consensus 64 ~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 143 (226)
T 1i1n_A 64 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR 143 (226)
T ss_dssp HHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc
Confidence 446777776 899999999997 799999999999999999876432 1
Q ss_pred -------------------HHHHHHHhccccCcEEEEEcc
Q 042963 50 -------------------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++++.++|||||++++...
T Consensus 144 ~~~~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 144 MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred cCcccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence 456899999999999998654
No 117
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.80 E-value=5.2e-09 Score=78.71 Aligned_cols=65 Identities=14% Similarity=0.274 Sum_probs=53.5
Q ss_pred HHHHHHcCCC---CCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------
Q 042963 5 SFLIEKARVS---KGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~---~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------- 49 (171)
+.+++.+... ++.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 52 ~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 131 (207)
T 1jsx_A 52 RHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEP 131 (207)
T ss_dssp HHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCS
T ss_pred HHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccC
Confidence 4555555443 4899999998 8999999999999999998776542
Q ss_pred --------------HHHHHHHhccccCcEEEEEc
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.+.++|+|||++++..
T Consensus 132 ~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 132 PFDGVISRAFASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp CEEEEECSCSSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CcCEEEEeccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 78899999999999998863
No 118
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.80 E-value=1.7e-08 Score=77.80 Aligned_cols=66 Identities=17% Similarity=0.146 Sum_probs=55.7
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
+..+++.+++++|++|||+|| +|+++|+|+++++.|+++.+..++.
T Consensus 80 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 159 (248)
T 2yvl_A 80 SFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIF 159 (248)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCB
T ss_pred HHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcc
Confidence 457788899999999999998 8999999999999999998765541
Q ss_pred -----------HHHHHHHhccccCcEEEEEc
Q 042963 50 -----------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|+|||++++..
T Consensus 160 D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 160 HAAFVDVREPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp SEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred cEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 66778888888888887754
No 119
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.79 E-value=1.1e-08 Score=77.51 Aligned_cols=107 Identities=11% Similarity=0.119 Sum_probs=68.8
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHH----------hch-----H------
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKE----------AGL-----Q------ 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~----------~gl-----~------ 49 (171)
+.+++.+. .++.+|||||| +|+|+|+|+++++.|+++... ..+ +
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~ 101 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGD 101 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEES
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECC
Confidence 34555565 78999999998 899999999999999876421 011 0
Q ss_pred ---------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhh--h-cc-cCCCcCCCHHHHHHHHHhcCC
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMK--E-YV-FPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~--~-~i-fp~~~lp~~~~l~~~~~~~g~ 112 (171)
.+++++.++|||||++++..................|.. . .. .......+..++.+.++++|+
T Consensus 102 ~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 177 (230)
T 3cc8_A 102 VLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGY 177 (230)
T ss_dssp CGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTE
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCC
Confidence 788999999999999998764332110000000000100 0 00 011245789999999999984
No 120
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.79 E-value=8.3e-09 Score=78.66 Aligned_cols=62 Identities=16% Similarity=0.220 Sum_probs=51.7
Q ss_pred cCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------------
Q 042963 11 ARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------ 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------ 49 (171)
+...++.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 60 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 60 VKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp HHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred HHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCC
Confidence 35568899999998 7999999999999999988665432
Q ss_pred ---------------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 ---------------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ---------------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++.+.++|||||++++.++..
T Consensus 140 ~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 140 QYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp CEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred CccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 56788999999999999876543
No 121
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.79 E-value=1e-08 Score=80.47 Aligned_cols=56 Identities=14% Similarity=0.129 Sum_probs=48.3
Q ss_pred CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------------
Q 042963 13 VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------------- 49 (171)
+.++.+|||||| +|||||+|+++++.|+++++..++.
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 468999999997 8999999999999999998876542
Q ss_pred -------HHHHHHHhccccCcEEEEE
Q 042963 50 -------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~ 68 (171)
.+++.+.++|||||++++.
T Consensus 158 ~a~~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 158 RAVAPLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp ESSCCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 6778888999999998764
No 122
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.78 E-value=1.3e-08 Score=78.90 Aligned_cols=66 Identities=14% Similarity=0.112 Sum_probs=55.9
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-chH----------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-GLQ---------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-gl~---------------- 49 (171)
+..+++.++++++++|||+|| +|+|+|+|+++++.|+++++.. |..
T Consensus 85 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 85 ASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 457888999999999999997 7999999999999999998765 311
Q ss_pred --------------HHHHHHHhccccCcEEEEEc
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++..
T Consensus 165 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 165 AAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 67888888888888888754
No 123
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.78 E-value=1.6e-08 Score=74.61 Aligned_cols=83 Identities=16% Similarity=0.162 Sum_probs=62.4
Q ss_pred HHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch---------------H-------
Q 042963 6 FLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL---------------Q------- 49 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl---------------~------- 49 (171)
.+++.+ ++++.+|||||| +|+|+|+|+++++.|+++.....+ +
T Consensus 38 ~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 38 RLIDAM-APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp HHHHHH-SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred HHHHHh-ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCc
Confidence 455565 789999999998 899999999999999987532110 0
Q ss_pred -----------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 -----------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 -----------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.+++++.++|+|||++++...... -.+..++.+.++++|+
T Consensus 117 ~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~-----------------------~~~~~~~~~~l~~~Gf 167 (195)
T 3cgg_A 117 VMGFLAEDGREPALANIHRALGADGRAVIGFGAGR-----------------------GWVFGDFLEVAERVGL 167 (195)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS-----------------------SCCHHHHHHHHHHHTE
T ss_pred HHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC-----------------------CcCHHHHHHHHHHcCC
Confidence 678899999999999988542110 1356778888888874
No 124
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.78 E-value=1.1e-08 Score=78.68 Aligned_cols=68 Identities=19% Similarity=0.286 Sum_probs=55.6
Q ss_pred HHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
..+...+.+.++.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 44 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 123 (233)
T 2gpy_A 44 ESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLEL 123 (233)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTT
T ss_pred HHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhccc
Confidence 34445566788999999997 8999999999999999987654421
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++.+.++|||||++++.++..
T Consensus 124 ~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 124 YPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp SCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 67889999999999999976543
No 125
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.77 E-value=2e-09 Score=86.71 Aligned_cols=66 Identities=9% Similarity=0.061 Sum_probs=53.2
Q ss_pred HHHHHHHHcCCC-CCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHH------hc-------------
Q 042963 3 KVSFLIEKARVS-KGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKE------AG------------- 47 (171)
Q Consensus 3 k~~~ll~~l~l~-~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~------~g------------- 47 (171)
|+..+++.+++. +|.+|||||| +|+|||+|++|++.+.++-.+ .+
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~ 151 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGL 151 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCC
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCC
Confidence 889999999986 6789999998 899999999999985442110 01
Q ss_pred hH------------HHHHHHHhccccCcEEEEE
Q 042963 48 LQ------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 48 l~------------~~~~~~~r~LkpgG~l~i~ 68 (171)
++ .++.+++++|||||++++.
T Consensus 152 fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 152 PSFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 11 6799999999999999874
No 126
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.77 E-value=8.3e-09 Score=84.33 Aligned_cols=103 Identities=12% Similarity=0.109 Sum_probs=69.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.+.+++.++++++.+|||||| +++++|++ ++++ +++.+..++.
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p~~D 249 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLREVPHAD 249 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTTCCCCCS
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCCCCCCCc
Confidence 456788899999999999998 79999995 4444 2222111111
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhh--hcccCCCcCCCHHHHHHHHHhc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMK--EYVFPGGCLPSLNRITSTMTSS 110 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~--~~ifp~~~lp~~~~l~~~~~~~ 110 (171)
.++++++++|||||+++|.+...+..... ....+.. .....++...+.+++.+.++++
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~---~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 326 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDA---HQSKEMDFMMLAARTGQERTAAELEPLFTAA 326 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSC---CHHHHHHHHHHHTTSCCCCBHHHHHHHHHHT
T ss_pred EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc---chhhhcChhhhhcCCCcCCCHHHHHHHHHHC
Confidence 78999999999999999987655442110 0001111 1123556778888999999888
Q ss_pred CC
Q 042963 111 SR 112 (171)
Q Consensus 111 g~ 112 (171)
||
T Consensus 327 Gf 328 (348)
T 3lst_A 327 GL 328 (348)
T ss_dssp TE
T ss_pred CC
Confidence 83
No 127
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.77 E-value=1.7e-08 Score=79.77 Aligned_cols=66 Identities=20% Similarity=0.224 Sum_probs=55.6
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
+..+++.+++++|.+|||+|| +|+++|+|+++++.|+++++..++.
T Consensus 101 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 180 (277)
T 1o54_A 101 SSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEK 180 (277)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCC
T ss_pred HHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCC
Confidence 456788899999999999997 7999999999999999998776541
Q ss_pred -------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|+|||++++..
T Consensus 181 ~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 181 DVDALFLDVPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp SEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 56778888888888887754
No 128
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.76 E-value=7.9e-09 Score=82.19 Aligned_cols=59 Identities=8% Similarity=0.076 Sum_probs=51.8
Q ss_pred CCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH----------------------------
Q 042963 13 VSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~---------------------------- 49 (171)
+++|++|||+|| +|+|+|+|+++++.|+++++..++.
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch
Confidence 578999999998 5999999999999999998876643
Q ss_pred ---HHHHHHHhccccCcEEEEEccc
Q 042963 50 ---QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ---~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|||||++++++..
T Consensus 203 ~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 203 RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 6889999999999999987643
No 129
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.76 E-value=1.6e-08 Score=79.33 Aligned_cols=63 Identities=21% Similarity=0.229 Sum_probs=52.3
Q ss_pred HHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------
Q 042963 7 LIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------------- 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~----------------------- 49 (171)
.++.. ++++.+|||||| +|+|+|+|+.+++.|+++++..++.
T Consensus 113 ~l~~~-~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n 191 (254)
T 2nxc_A 113 ALARH-LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVAN 191 (254)
T ss_dssp HHHHH-CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEE
T ss_pred HHHHh-cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEEC
Confidence 33433 689999999998 8999999999999999998765521
Q ss_pred -------HHHHHHHhccccCcEEEEEcc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++++.++|||||++++..+
T Consensus 192 ~~~~~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 192 LYAELHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence 678889999999999998653
No 130
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.76 E-value=1.9e-08 Score=77.02 Aligned_cols=56 Identities=27% Similarity=0.382 Sum_probs=47.7
Q ss_pred CCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch--H----------------------------
Q 042963 14 SKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL--Q---------------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl--~---------------------------- 49 (171)
.++.+|||||| +|+|+|+|++|++.|+++....++ .
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~ 115 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYI 115 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGGC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCcccccc
Confidence 38899999998 899999999999999998765331 1
Q ss_pred -------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.++++++++|||||++++..
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 116 IDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp CSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 67889999999999999854
No 131
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.75 E-value=2.1e-08 Score=76.06 Aligned_cols=59 Identities=22% Similarity=0.370 Sum_probs=49.7
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhc--hH---------------------------
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAG--LQ--------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~g--l~--------------------------- 49 (171)
++++.+|||||| +|+|+|+|+++++.|+++.+..+ +.
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 456899999998 89999999999999999876532 11
Q ss_pred -------HHHHHHHhccccCcEEEEEccc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.++++++++|||||++++....
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 6789999999999999987643
No 132
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.74 E-value=9.3e-09 Score=78.84 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=55.3
Q ss_pred HHHHHHHc--CCCCCCeEEEeCC----------------------eEEEEcCCHHHHHHHHHHHHHhc-----hH-----
Q 042963 4 VSFLIEKA--RVSKGHDVLFLRL----------------------DYTGITLSEEQLKYTEMKVKEAG-----LQ----- 49 (171)
Q Consensus 4 ~~~ll~~l--~l~~g~rVLDIGc----------------------~VtgId~S~~~~~~A~~~~~~~g-----l~----- 49 (171)
...+++.+ .++++++|||||| +|+|+|+|+++++.|+++++..+ ..
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 45677887 5899999999996 39999999999999999877654 11
Q ss_pred ------------------------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ------------------------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ------------------------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++++.++|||||++++...
T Consensus 151 ~~d~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 151 EGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp ESCGGGCCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred ECCcccCCCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEe
Confidence 456889999999999998653
No 133
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.74 E-value=1.5e-08 Score=78.76 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=30.2
Q ss_pred CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh
Q 042963 13 VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA 46 (171)
Q Consensus 13 l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~ 46 (171)
++++.+|||||| +|+|||+|+.+++.|+++++..
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 468899999998 7999999999999999987654
No 134
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.74 E-value=2.3e-08 Score=82.13 Aligned_cols=105 Identities=10% Similarity=-0.035 Sum_probs=71.0
Q ss_pred HHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhc---hH----------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAG---LQ---------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~g---l~---------------- 49 (171)
..+++..++.+..+|||||| +++..|+ +++++.|+++.+..+ ++
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~ 247 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADL 247 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSE
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCCCceE
Confidence 45677778899999999997 7888887 889999998764332 11
Q ss_pred ----------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchh--hhcccCCCcCCCHHHHHHHHHhcC
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFM--KEYVFPGGCLPSLNRITSTMTSSS 111 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~--~~~ifp~~~lp~~~~l~~~~~~~g 111 (171)
.+++++++.|+|||+++|.+...++..... ....++ .-....+|.-.+.+|+.+.++++|
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~--~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AG 325 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGP--LLTQLYSLNMLVQTEGQERTPTHYHMLLSSAG 325 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCC--HHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHT
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCC--HHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCC
Confidence 679999999999999999876654321100 000111 111233556667777777777777
Q ss_pred C
Q 042963 112 R 112 (171)
Q Consensus 112 ~ 112 (171)
|
T Consensus 326 f 326 (353)
T 4a6d_A 326 F 326 (353)
T ss_dssp C
T ss_pred C
Confidence 3
No 135
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.73 E-value=1.2e-08 Score=78.55 Aligned_cols=61 Identities=13% Similarity=0.182 Sum_probs=49.3
Q ss_pred HHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-chH--------------------
Q 042963 8 IEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-GLQ-------------------- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-gl~-------------------- 49 (171)
++.++++++++|||||| +|+|||+|++|++.+.++++.. ++.
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEE
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEE
Confidence 44678999999999998 6999999999888877776541 111
Q ss_pred -------------HHHHHHHhccccCcEEEEE
Q 042963 50 -------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 -------------~~~~~~~r~LkpgG~l~i~ 68 (171)
.+++++.++|||||++++.
T Consensus 150 ~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 150 VIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 4578899999999999984
No 136
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.73 E-value=2.4e-08 Score=75.53 Aligned_cols=60 Identities=15% Similarity=0.157 Sum_probs=50.8
Q ss_pred CCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------------
Q 042963 12 RVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------- 49 (171)
Q Consensus 12 ~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------- 49 (171)
...++.+|||||| +|+|+|+|+++++.|+++++..++.
T Consensus 53 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 132 (210)
T 3c3p_A 53 RIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFM 132 (210)
T ss_dssp HHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEE
T ss_pred HhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEE
Confidence 3457889999997 7999999999999999988766542
Q ss_pred --------HHHHHHHhccccCcEEEEEccc
Q 042963 50 --------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|||||++++.++.
T Consensus 133 ~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 133 DCDVFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp ETTTSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred cCChhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 6788999999999999987643
No 137
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.73 E-value=1.6e-08 Score=77.30 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=48.8
Q ss_pred CCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch--------------H----------------
Q 042963 14 SKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL--------------Q---------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl--------------~---------------- 49 (171)
.++.+|||||| +|+|+|+|+++++.|+++.....+ +
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~ 118 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKTTE 118 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCSHH
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCCHH
Confidence 78899999998 799999999999999987421100 0
Q ss_pred ---HHHHHHHhccccCcEEEEEcccCC
Q 042963 50 ---QFFGCCESLLAEHGLLLLQFSSVP 73 (171)
Q Consensus 50 ---~~~~~~~r~LkpgG~l~i~~i~~~ 73 (171)
.++++++++|||||++++.+...+
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 119 ELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp HHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 678999999999999999765543
No 138
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.73 E-value=6e-08 Score=70.84 Aligned_cols=45 Identities=13% Similarity=0.095 Sum_probs=40.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
.+.+++.+++.++.+|||||| +|+|+|+|+++++.|+++++..++
T Consensus 24 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 82 (183)
T 2yxd_A 24 RAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNI 82 (183)
T ss_dssp HHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCC
Confidence 467788889999999999998 899999999999999999877654
No 139
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.72 E-value=1.1e-08 Score=79.72 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=42.6
Q ss_pred cCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-chH-----------------------
Q 042963 11 ARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-GLQ----------------------- 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-gl~----------------------- 49 (171)
++++||++|||+|| +|+|+|+|+.|++...+.+++. ++.
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEE
Confidence 45999999999998 7999999999875544443321 110
Q ss_pred ---------H-HHHHHHhccccCcEEEEE
Q 042963 50 ---------Q-FFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 ---------~-~~~~~~r~LkpgG~l~i~ 68 (171)
. +.+.+.++|||||++++.
T Consensus 152 ~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 152 VDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp ECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 2 345566699999999986
No 140
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.72 E-value=2.8e-08 Score=77.84 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=36.4
Q ss_pred HHHHcCCC-CCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 7 LIEKARVS-KGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 7 ll~~l~l~-~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
+...+.++ ++.+|||||| +|+|||+|+++++.|+++++..++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCC
Confidence 44567788 9999999997 899999999999999999876554
No 141
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.71 E-value=1.2e-08 Score=83.46 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=56.4
Q ss_pred HHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 4 VSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.+.+++.+...++.+|||||| +|+|+|+|+.+++.|+++++..++.
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~ 264 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDM 264 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEE
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeE
Confidence 356778887788899999998 7999999999999999998765432
Q ss_pred -------------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.++++++++|||||++++..
T Consensus 265 Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 265 IISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp EEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 57889999999999998854
No 142
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.71 E-value=1.5e-08 Score=76.72 Aligned_cols=66 Identities=12% Similarity=-0.009 Sum_probs=51.1
Q ss_pred HHHHHcCCC-CCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 6 FLIEKARVS-KGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 6 ~ll~~l~l~-~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
.+++.+... ++.+|||+|| +|+|||+|++|++.|+++++..++.
T Consensus 44 ~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~f 123 (202)
T 2fpo_A 44 TLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPH 123 (202)
T ss_dssp HHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCE
T ss_pred HHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCC
Confidence 344444443 7899999998 8999999999999999998766542
Q ss_pred ---------------HHHHHHHh--ccccCcEEEEEccc
Q 042963 50 ---------------QFFGCCES--LLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ---------------~~~~~~~r--~LkpgG~l~i~~i~ 71 (171)
.+++.+.+ +|+|||++++.+..
T Consensus 124 D~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 124 NIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp EEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 45667754 59999999886643
No 143
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.71 E-value=2.2e-08 Score=81.31 Aligned_cols=67 Identities=9% Similarity=0.122 Sum_probs=57.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhc--------------hH---
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAG--------------LQ--- 49 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~g--------------l~--- 49 (171)
...+++.+++++|++|||||| +|+|+|+|+++++.|+++++..+ +.
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 567888999999999999998 79999999999999999987521 11
Q ss_pred --------------------------HHHHHHHhccccCcEEEEEcc
Q 042963 50 --------------------------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 --------------------------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++++.++|||||++++...
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp SCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred CChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 568899999999999997653
No 144
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.71 E-value=3e-08 Score=80.31 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=37.2
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
+...+++++|++|||+|| +|+|+|+|+.+++.+++++++.|+
T Consensus 110 ~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~ 168 (315)
T 1ixk_A 110 PPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV 168 (315)
T ss_dssp HHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC
T ss_pred HHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC
Confidence 456789999999999997 699999999999999999877654
No 145
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.71 E-value=4.1e-08 Score=74.72 Aligned_cols=96 Identities=9% Similarity=0.036 Sum_probs=62.5
Q ss_pred CCCeEEEeCC----------eEEEEcCCHHHHHHHHHHHH--------Hhc-----hH---------------HHHHHHH
Q 042963 15 KGHDVLFLRL----------DYTGITLSEEQLKYTEMKVK--------EAG-----LQ---------------QFFGCCE 56 (171)
Q Consensus 15 ~g~rVLDIGc----------~VtgId~S~~~~~~A~~~~~--------~~g-----l~---------------~~~~~~~ 56 (171)
++.+|||||| .-+|+|+|+++++.|+++-- ... ++ .+++++.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~ 126 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIKIGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEAY 126 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCCEEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHhccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHHHHHH
Confidence 4899999998 22999999999999987500 000 00 7899999
Q ss_pred hccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 57 SLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 57 r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
++|+|||++++........ +....... ......+......+.+++.+.++++|+
T Consensus 127 ~~L~pgG~l~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~Gf 180 (219)
T 1vlm_A 127 RILKKGGYLIVGIVDRESF-LGREYEKN-KEKSVFYKNARFFSTEELMDLMRKAGF 180 (219)
T ss_dssp HHEEEEEEEEEEEECSSSH-HHHHHHHT-TTC-CCSTTCCCCCHHHHHHHHHHTTC
T ss_pred HHcCCCcEEEEEEeCCccH-HHHHHHHH-hcCcchhcccccCCHHHHHHHHHHCCC
Confidence 9999999999976544321 10000000 000011122356789999999999985
No 146
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.71 E-value=2.6e-08 Score=72.20 Aligned_cols=68 Identities=21% Similarity=0.241 Sum_probs=51.4
Q ss_pred HHHHHHcC--CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 5 SFLIEKAR--VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 5 ~~ll~~l~--l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
+.+++.+. ++++.+|||+|| +|+|+|+|+++++.|+++++..++.
T Consensus 29 ~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (171)
T 1ws6_A 29 KALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQG 108 (171)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTT
T ss_pred HHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccC
Confidence 34555554 348899999998 7999999999999999987654311
Q ss_pred -----------------HHHHHHH--hccccCcEEEEEcccC
Q 042963 50 -----------------QFFGCCE--SLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 -----------------~~~~~~~--r~LkpgG~l~i~~i~~ 72 (171)
..++.+. ++|||||++++.+...
T Consensus 109 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 109 ERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 4556666 8899999998865433
No 147
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.70 E-value=2.2e-08 Score=78.31 Aligned_cols=66 Identities=20% Similarity=0.186 Sum_probs=50.8
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHh---------ch-----H-------
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEA---------GL-----Q------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~---------gl-----~------- 49 (171)
..++..+- .++.+|||||| +|+|+|+|++|++.|+++.... .+ +
T Consensus 45 ~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (260)
T 2avn_A 45 GSFLEEYL-KNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGD 123 (260)
T ss_dssp HHHHHHHC-CSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSS
T ss_pred HHHHHHhc-CCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcch
Confidence 34444432 38899999998 8999999999999999885310 00 0
Q ss_pred ---------HHHHHHHhccccCcEEEEEccc
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|||||++++...+
T Consensus 124 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 124 VLSYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred hhhccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6789999999999999987644
No 148
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.70 E-value=7.6e-09 Score=88.58 Aligned_cols=99 Identities=18% Similarity=0.147 Sum_probs=67.9
Q ss_pred HHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
+.+++.+...++.+|||||| +|+|||+|+ |++.|+++++..|+.
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD 226 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVD 226 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeE
Confidence 44667777888999999998 899999999 999999998877652
Q ss_pred -----------------HHHHHHHhccccCcEEEEEcccCCCcc------cccccCccchhhhcccCCCcCCCHHHHH
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSSVPDQC------YDEHRLSPGFMKEYVFPGGCLPSLNRIT 104 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~~~~~~------~~~~~~~~~~~~~~ifp~~~lp~~~~l~ 104 (171)
..+..+.++|||||++++......... +.......++....+|||..++++.++.
T Consensus 227 ~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e~~~~~~~w~~~~~~g~dl~~l~~~~ 304 (480)
T 3b3j_A 227 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAA 304 (480)
T ss_dssp EEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHHHHHSSCBTTBCCGGGHHHH
T ss_pred EEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHHHhhccCccccccCCCcChhhhhhHH
Confidence 445677899999999985321111000 0000001223334579999998887764
No 149
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.70 E-value=5.5e-09 Score=83.47 Aligned_cols=30 Identities=20% Similarity=0.427 Sum_probs=27.1
Q ss_pred CCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHH
Q 042963 15 KGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVK 44 (171)
Q Consensus 15 ~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~ 44 (171)
++.+|||||| +|+|||+|+.|++.|+++++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~ 91 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIR 91 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence 7899999998 89999999999999998743
No 150
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.70 E-value=1.9e-08 Score=76.11 Aligned_cols=43 Identities=9% Similarity=-0.102 Sum_probs=34.2
Q ss_pred HHHHHcCCC-CCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 6 FLIEKARVS-KGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 6 ~ll~~l~l~-~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
.+++.+... ++.+|||+|| +|+|||+|++|++.|+++++..++
T Consensus 43 ~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 101 (201)
T 2ift_A 43 TLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKC 101 (201)
T ss_dssp HHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 344444432 7899999998 899999999999999998865543
No 151
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.70 E-value=2e-08 Score=78.15 Aligned_cols=34 Identities=9% Similarity=0.160 Sum_probs=28.0
Q ss_pred CCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH
Q 042963 12 RVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE 45 (171)
Q Consensus 12 ~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~ 45 (171)
...++.+|||||| +|+|||+|+.|++.|+++++.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~ 92 (235)
T 3ckk_A 43 RAQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRA 92 (235)
T ss_dssp ---CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHH
Confidence 3567889999998 799999999999999987653
No 152
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.70 E-value=4e-08 Score=74.59 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=31.1
Q ss_pred CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 14 SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 14 ~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
.++.+|||||| +|+|||+|+++++.|++++...++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~ 90 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV 90 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC
Confidence 46889999998 899999999999999999876654
No 153
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.70 E-value=1.8e-08 Score=83.18 Aligned_cols=104 Identities=12% Similarity=0.125 Sum_probs=70.9
Q ss_pred HHHHHHcC-CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 5 SFLIEKAR-VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 5 ~~ll~~l~-l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
+.+++.+. +.++.+|||||| +++++|+ +++++.|+++. +++
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~---~v~~~~~d~~~~~p~~D~v~~ 267 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFS---GVEHLGGDMFDGVPKGDAIFI 267 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCT---TEEEEECCTTTCCCCCSEEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcC---CCEEEecCCCCCCCCCCEEEE
Confidence 45666666 888999999998 8999999 89998876531 111
Q ss_pred -------------HHHHHHHhccccCcEEEEEcccCCCcccccc-c---CccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 -------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEH-R---LSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 -------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~-~---~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||+++|.+...++...... . ...++......+++...+..++.+.++++||
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF 347 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGF 347 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTC
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCC
Confidence 6799999999999999998876654321000 0 0001111111356677788888888888884
No 154
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.69 E-value=1.5e-08 Score=77.91 Aligned_cols=64 Identities=9% Similarity=0.142 Sum_probs=52.5
Q ss_pred HHH---HHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh-c--------------h--
Q 042963 5 SFL---IEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA-G--------------L-- 48 (171)
Q Consensus 5 ~~l---l~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~-g--------------l-- 48 (171)
+.+ ++.++++++++|||||| +|+|||+|+++++.|+++++.. + +
T Consensus 61 ~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~ 140 (230)
T 1fbn_A 61 AAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANI 140 (230)
T ss_dssp HHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTT
T ss_pred HHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccccccc
Confidence 455 66678899999999998 7999999999999999876431 0 0
Q ss_pred ----H-------------HHHHHHHhccccCcEEEEE
Q 042963 49 ----Q-------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 49 ----~-------------~~~~~~~r~LkpgG~l~i~ 68 (171)
+ .+++++.++|||||++++.
T Consensus 141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 0 5689999999999999986
No 155
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.68 E-value=3.2e-08 Score=75.84 Aligned_cols=57 Identities=32% Similarity=0.452 Sum_probs=48.0
Q ss_pred CCCCCeEEEeCC-------------eEEEEcCCHHHHHHHHHHHHHhch--H----------------------------
Q 042963 13 VSKGHDVLFLRL-------------DYTGITLSEEQLKYTEMKVKEAGL--Q---------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc-------------~VtgId~S~~~~~~A~~~~~~~gl--~---------------------------- 49 (171)
++++.+|||||| +|+|+|+|+++++.|+++....+. .
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNYL 110 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGGC
T ss_pred cCCCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhhc
Confidence 467899999998 799999999999999998764321 1
Q ss_pred -------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++..
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 57889999999999999854
No 156
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.68 E-value=6e-08 Score=79.41 Aligned_cols=65 Identities=23% Similarity=0.193 Sum_probs=56.5
Q ss_pred HHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
+.++..++.+++.+|||+|| +|+|+|+|+.+++.|+++++..|++
T Consensus 193 ~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~ 272 (354)
T 3tma_A 193 QALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPE 272 (354)
T ss_dssp HHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCC
T ss_pred HHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCC
Confidence 45678889999999999998 6999999999999999999877742
Q ss_pred -------------------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------------------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------------------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++.+
T Consensus 273 ~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 273 VDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp CSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 46778899999999998864
No 157
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.68 E-value=6e-08 Score=77.04 Aligned_cols=101 Identities=10% Similarity=0.004 Sum_probs=66.1
Q ss_pred HHHHHHHcC-CCCCCeEEEeCC-------------------eEEEEcCCHHHHHHHHHHHHHh-----------------
Q 042963 4 VSFLIEKAR-VSKGHDVLFLRL-------------------DYTGITLSEEQLKYTEMKVKEA----------------- 46 (171)
Q Consensus 4 ~~~ll~~l~-l~~g~rVLDIGc-------------------~VtgId~S~~~~~~A~~~~~~~----------------- 46 (171)
++++++.+. ..+..+|||||| +|+|||+|+.|++.|++++...
T Consensus 65 ~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~ 144 (274)
T 2qe6_A 65 LVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYIL 144 (274)
T ss_dssp HHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHH
T ss_pred HHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhh
Confidence 345555555 345589999998 7999999999999999886310
Q ss_pred -------ch--H--------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcC
Q 042963 47 -------GL--Q--------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCL 97 (171)
Q Consensus 47 -------gl--~--------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~l 97 (171)
.+ . .++++++++|||||++++.+.+...+. ........+.....| ...
T Consensus 145 ~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~-~~~ 221 (274)
T 2qe6_A 145 NHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLP--AQQKLARITRENLGE-GWA 221 (274)
T ss_dssp HSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCH--HHHHHHHHHHHHHSC-CCC
T ss_pred ccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchH--HHHHHHHHHHhcCCC-Ccc
Confidence 00 0 689999999999999999876543100 000011111111122 355
Q ss_pred CCHHHHHHHH
Q 042963 98 PSLNRITSTM 107 (171)
Q Consensus 98 p~~~~l~~~~ 107 (171)
.+.+++...+
T Consensus 222 ~s~~ei~~~l 231 (274)
T 2qe6_A 222 RTPEEIERQF 231 (274)
T ss_dssp BCHHHHHHTT
T ss_pred CCHHHHHHHh
Confidence 7888888877
No 158
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.67 E-value=1.9e-08 Score=76.84 Aligned_cols=67 Identities=13% Similarity=0.239 Sum_probs=54.8
Q ss_pred HHHHHHc--CCCCCCeEEEeCC---------------------eEEEEcCCHHHHHHHHHHHHHhch-----H-------
Q 042963 5 SFLIEKA--RVSKGHDVLFLRL---------------------DYTGITLSEEQLKYTEMKVKEAGL-----Q------- 49 (171)
Q Consensus 5 ~~ll~~l--~l~~g~rVLDIGc---------------------~VtgId~S~~~~~~A~~~~~~~gl-----~------- 49 (171)
+.+++.+ .++++++|||||| +|+|+|+|+++++.|+++++..++ .
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 4566777 6899999999996 599999999999999999876541 1
Q ss_pred --------------------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 --------------------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 --------------------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|||||++++....
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEcc
Confidence 3457889999999999986543
No 159
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.66 E-value=6.6e-08 Score=73.82 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=35.6
Q ss_pred HHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhc
Q 042963 6 FLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~g 47 (171)
.++-...+++|.+|||||| +|+|+|+|+++++.|+++++..+
T Consensus 46 ~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 103 (230)
T 3evz_A 46 YIFLKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNN 103 (230)
T ss_dssp HHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTT
T ss_pred hhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhC
Confidence 3334556889999999998 79999999999999999987665
No 160
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.66 E-value=3.8e-08 Score=74.79 Aligned_cols=56 Identities=5% Similarity=0.011 Sum_probs=47.4
Q ss_pred CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------------------
Q 042963 14 SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------------------- 49 (171)
.+.++|||||| +|+|+|+|+.|++.|+++++..|+.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~~DvVLa~k~LHl 127 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPV 127 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEETCHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCCcChhhHhhHHHh
Confidence 67889999999 8999999999999999999876643
Q ss_pred -----HHHHHHHhccccCcEEEEEc
Q 042963 50 -----QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----~~~~~~~r~LkpgG~l~i~~ 69 (171)
....++.+.|||||.++-..
T Consensus 128 L~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 128 LKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 22347899999999987654
No 161
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.66 E-value=2.2e-08 Score=83.04 Aligned_cols=63 Identities=13% Similarity=0.167 Sum_probs=53.1
Q ss_pred HHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------
Q 042963 6 FLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------- 49 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------- 49 (171)
.+.+.+.+.++.+|||||| +|+|||+| +|++.|+++++..++.
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~ 132 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDV 132 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEE
T ss_pred HHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceE
Confidence 3445567899999999998 89999999 9999999998876543
Q ss_pred -----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||.+++..
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 57888999999999997643
No 162
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.66 E-value=4.9e-08 Score=76.36 Aligned_cols=61 Identities=10% Similarity=0.199 Sum_probs=49.9
Q ss_pred cCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------------
Q 042963 11 ARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------ 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------ 49 (171)
+...++.+|||||| +|++||+|+++++.|++++++.|+.
T Consensus 75 ~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 75 LKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp HHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred HHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCC
Confidence 34567889999997 8999999999999999987654431
Q ss_pred ----------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++.+.++|||||++++.++.
T Consensus 155 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 155 GSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp TCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred CCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 5677889999999999887644
No 163
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.65 E-value=5.3e-09 Score=81.69 Aligned_cols=63 Identities=17% Similarity=0.196 Sum_probs=52.7
Q ss_pred cCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------------
Q 042963 11 ARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------ 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------ 49 (171)
+.+.++.+|||||| +|+|||+|+++++.|+++++..|+.
T Consensus 56 ~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 56 IRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred HhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCC
Confidence 35567889999997 8999999999999999988765432
Q ss_pred ---------------HHHHHHHhccccCcEEEEEcccCC
Q 042963 50 ---------------QFFGCCESLLAEHGLLLLQFSSVP 73 (171)
Q Consensus 50 ---------------~~~~~~~r~LkpgG~l~i~~i~~~ 73 (171)
.+++++.++|||||.+++.++...
T Consensus 136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 136 QFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp CEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred CEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 668899999999999999876543
No 164
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.65 E-value=3.1e-08 Score=81.04 Aligned_cols=61 Identities=20% Similarity=0.205 Sum_probs=51.5
Q ss_pred HHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------- 49 (171)
+.+.+.+.+.++.+|||||| +|+|||+|+ |++.|+++++..++.
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 34555667899999999998 899999996 999999998776542
Q ss_pred -------------------HHHHHHHhccccCcEEE
Q 042963 50 -------------------QFFGCCESLLAEHGLLL 66 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~ 66 (171)
.+++++.++|||||+++
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 57888899999999997
No 165
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.64 E-value=5.7e-08 Score=80.87 Aligned_cols=57 Identities=18% Similarity=0.241 Sum_probs=50.0
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------------
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~----------------------------- 49 (171)
..++.+|||+|| +|+|||+|+.+++.|+++++..++.
T Consensus 231 ~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 231 GVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 458899999998 8999999999999999998776532
Q ss_pred ----------HHHHHHHhccccCcEEEEEc
Q 042963 50 ----------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ----------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++..
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 67899999999999999864
No 166
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.64 E-value=4.6e-08 Score=73.39 Aligned_cols=67 Identities=16% Similarity=0.182 Sum_probs=51.2
Q ss_pred HHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHh-chH-------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEA-GLQ------------------- 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~-gl~------------------- 49 (171)
..++... ++++.+|||||| +|+|+|+|+.+++.|+++.... ++.
T Consensus 33 ~~~l~~~-~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v 111 (215)
T 2pxx_A 33 RALLEPE-LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVV 111 (215)
T ss_dssp HHHHGGG-CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEE
T ss_pred HHHHHHh-cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEE
Confidence 3344333 488999999998 7999999999999999886421 111
Q ss_pred ----------------------------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 ----------------------------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ----------------------------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++++.++|||||++++.+...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 35678899999999999877544
No 167
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.63 E-value=3.1e-08 Score=75.74 Aligned_cols=61 Identities=21% Similarity=0.325 Sum_probs=49.9
Q ss_pred HHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-chH--------------------
Q 042963 8 IEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-GLQ-------------------- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-gl~-------------------- 49 (171)
++.+.++++++|||+|| +|+|+|+|+++++.++++++.. ++.
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEE
T ss_pred HHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCce
Confidence 44556899999999998 7999999999999998877432 111
Q ss_pred -------------HHHHHHHhccccCcEEEEE
Q 042963 50 -------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 -------------~~~~~~~r~LkpgG~l~i~ 68 (171)
.+++++.++|||||++++.
T Consensus 146 ~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 146 VIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 3489999999999999886
No 168
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.63 E-value=6.7e-08 Score=82.26 Aligned_cols=68 Identities=15% Similarity=0.178 Sum_probs=57.3
Q ss_pred HHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 6 FLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
.+...+++++|++|||+|| +|+++|+|+.+++.+++++++.|+.
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~ 175 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGF 175 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTC
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhcccc
Confidence 3456788999999999997 7999999999999999999877653
Q ss_pred ---------------------------------------HHHHHHHhccccCcEEEEEcccCC
Q 042963 50 ---------------------------------------QFFGCCESLLAEHGLLLLQFSSVP 73 (171)
Q Consensus 50 ---------------------------------------~~~~~~~r~LkpgG~l~i~~i~~~ 73 (171)
.+++.+.++|||||+++..+.+..
T Consensus 176 FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 176 FDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp EEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred CCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 357788999999999998765543
No 169
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.62 E-value=4.8e-08 Score=80.51 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=71.9
Q ss_pred HHHHHHHcC-CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 4 VSFLIEKAR-VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 4 ~~~ll~~l~-l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
+..+++.+. ++++.+|||||| +++++|+ +++++.|++.. ++.
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~---~v~~~~~D~~~~~p~~D~v~ 264 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFP---GVTHVGGDMFKEVPSGDTIL 264 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCT---TEEEEECCTTTCCCCCSEEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcC---CeEEEeCCcCCCCCCCCEEE
Confidence 345677776 889999999998 8999999 88988776531 111
Q ss_pred --------------HHHHHHHhccccCcEEEEEcccCCCccccccc----CccchhhhcccCCCcCCCHHHHHHHHHhcC
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHR----LSPGFMKEYVFPGGCLPSLNRITSTMTSSS 111 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~----~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g 111 (171)
.++++++++|||||+++|.+...++....... ...++......+++...+..++.+.++++|
T Consensus 265 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AG 344 (364)
T 3p9c_A 265 MKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAG 344 (364)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTT
T ss_pred ehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCC
Confidence 67999999999999999988766543110000 000111010235677778888888888888
Q ss_pred C
Q 042963 112 R 112 (171)
Q Consensus 112 ~ 112 (171)
|
T Consensus 345 F 345 (364)
T 3p9c_A 345 F 345 (364)
T ss_dssp C
T ss_pred C
Confidence 4
No 170
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.62 E-value=2.9e-08 Score=74.40 Aligned_cols=44 Identities=20% Similarity=0.211 Sum_probs=25.2
Q ss_pred HHHHHHHcCC-CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhc
Q 042963 4 VSFLIEKARV-SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 4 ~~~ll~~l~l-~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~g 47 (171)
++.+++.+.. .++.+|||||| +|+|+|+|+++++.|++++...+
T Consensus 18 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 78 (215)
T 4dzr_A 18 VEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG 78 (215)
T ss_dssp HHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------
T ss_pred HHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC
Confidence 5667777776 89999999998 89999999999999999876554
No 171
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.61 E-value=5.1e-08 Score=78.22 Aligned_cols=67 Identities=13% Similarity=0.170 Sum_probs=51.0
Q ss_pred HHHHHHcC--CCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhc--------------------
Q 042963 5 SFLIEKAR--VSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAG-------------------- 47 (171)
Q Consensus 5 ~~ll~~l~--l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~g-------------------- 47 (171)
+.+++.+. ++++.+|||||| +|+|+|+|++|++.|+++....+
T Consensus 22 ~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 101 (313)
T 3bgv_A 22 GEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSK 101 (313)
T ss_dssp HHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTT
T ss_pred HHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccc
Confidence 34445443 348899999998 89999999999999998865320
Q ss_pred ------h-------H-------------------HHHHHHHhccccCcEEEEEccc
Q 042963 48 ------L-------Q-------------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 48 ------l-------~-------------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
+ + .++++++++|||||.+++.+..
T Consensus 102 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 102 ELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp SCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 1 0 6788999999999999987653
No 172
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.61 E-value=8.4e-08 Score=81.81 Aligned_cols=67 Identities=15% Similarity=0.103 Sum_probs=56.4
Q ss_pred HHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------
Q 042963 6 FLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------- 49 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------- 49 (171)
.+...+++++|++|||+|| +|+|+|+|+.+++.+++++++.|+.
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCE
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccC
Confidence 3456788999999999997 7999999999999999998876632
Q ss_pred --------------------------------------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 --------------------------------------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 --------------------------------------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++.+.++|||||+++..+.+.
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 36778899999999999866544
No 173
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.61 E-value=6.8e-08 Score=74.56 Aligned_cols=61 Identities=13% Similarity=0.220 Sum_probs=49.4
Q ss_pred cCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------------
Q 042963 11 ARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------ 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------ 49 (171)
+.+.++.+|||||| +|++||+|+++++.|+++.+..|+.
T Consensus 68 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 68 ISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp HHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCC
T ss_pred HHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 44567889999997 7999999999999999887554331
Q ss_pred ---------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 ---------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ---------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++++.++|+|||++++.++.
T Consensus 148 ~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 148 EFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp CEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred CcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5678888999999999887644
No 174
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.61 E-value=2.2e-08 Score=82.21 Aligned_cols=56 Identities=25% Similarity=0.251 Sum_probs=48.6
Q ss_pred cCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------------
Q 042963 11 ARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------------- 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------------- 49 (171)
..+.++.+|||||| +|+|||+| +|++.|+++++..++.
T Consensus 62 ~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~ 140 (349)
T 3q7e_A 62 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISE 140 (349)
T ss_dssp HHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEEC
T ss_pred cccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEc
Confidence 45678999999998 89999999 5999999998876543
Q ss_pred -------------HHHHHHHhccccCcEEEE
Q 042963 50 -------------QFFGCCESLLAEHGLLLL 67 (171)
Q Consensus 50 -------------~~~~~~~r~LkpgG~l~i 67 (171)
.+++++.++|||||+++.
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 141 WMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 678899999999999974
No 175
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.60 E-value=9.5e-08 Score=74.21 Aligned_cols=59 Identities=22% Similarity=0.158 Sum_probs=52.2
Q ss_pred CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------------
Q 042963 13 VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------------- 49 (171)
+++|++|||||| +|+|+|+++.+++.|+++++..|++
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 468999999998 7999999999999999999887763
Q ss_pred -------HHHHHHHhccccCcEEEEEccc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.++.+..+.|+|+|+++++...
T Consensus 93 ~Gg~~i~~Il~~~~~~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 93 MGGRLIARILEEGLGKLANVERLILQPNN 121 (225)
T ss_dssp ECHHHHHHHHHHTGGGCTTCCEEEEEESS
T ss_pred CChHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 6678888999999999998764
No 176
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.60 E-value=9.2e-08 Score=74.18 Aligned_cols=61 Identities=11% Similarity=0.215 Sum_probs=50.0
Q ss_pred cCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------------
Q 042963 11 ARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------ 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------ 49 (171)
+...++.+|||||| +|+++|+|+++++.|++++++.|+.
T Consensus 66 ~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 66 LKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred HHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCC
Confidence 44567889999997 8999999999999999987655432
Q ss_pred ----------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++.+.++|+|||.+++.++.
T Consensus 146 ~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 146 GSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp TCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred CCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 5678888999999999887643
No 177
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.59 E-value=1.2e-07 Score=75.16 Aligned_cols=42 Identities=10% Similarity=0.069 Sum_probs=36.5
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
+...+++++|++|||+|| +|+|+|+|+.+++.++++++..|+
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~ 133 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV 133 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC
Confidence 446678999999999997 799999999999999999876553
No 178
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.59 E-value=1.5e-07 Score=74.38 Aligned_cols=44 Identities=7% Similarity=0.129 Sum_probs=37.4
Q ss_pred HHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 4 VSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
++.+++.+. .++.+|||||| +|+|+|+|+++++.|+++++..++
T Consensus 99 ~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~ 158 (276)
T 2b3t_A 99 VEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI 158 (276)
T ss_dssp HHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 456667776 78899999997 899999999999999999876654
No 179
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.58 E-value=4.6e-08 Score=76.52 Aligned_cols=58 Identities=12% Similarity=0.100 Sum_probs=47.5
Q ss_pred CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhch--------H---------------HHHHH
Q 042963 14 SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGL--------Q---------------QFFGC 54 (171)
Q Consensus 14 ~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl--------~---------------~~~~~ 54 (171)
+++.+|||||| +|+|+|+|+++++.|+++.....+ . .++++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~l~~ 163 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEE 163 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCCCHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCChhhHHH
Confidence 68999999997 799999999999999887532110 0 56899
Q ss_pred HHhccccCcEEEEEccc
Q 042963 55 CESLLAEHGLLLLQFSS 71 (171)
Q Consensus 55 ~~r~LkpgG~l~i~~i~ 71 (171)
+.++|||||++++.+..
T Consensus 164 ~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 164 LARVVKPGGWVITATPG 180 (269)
T ss_dssp HHHHEEEEEEEEEEEEC
T ss_pred HHHhcCCCcEEEEEEcC
Confidence 99999999999987543
No 180
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.57 E-value=9.7e-08 Score=72.84 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=50.6
Q ss_pred HHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------------
Q 042963 9 EKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------------- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------------- 49 (171)
..+.+.++.+|||||| +|+++|+|+++++.|+++++..|+.
T Consensus 63 ~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~ 142 (229)
T 2avd_A 63 NLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGE 142 (229)
T ss_dssp HHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTC
T ss_pred HHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCC
Confidence 3345678899999997 7999999999999999887654431
Q ss_pred -----------------HHHHHHHhccccCcEEEEEccc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.+++.+.++|+|||.+++.++.
T Consensus 143 ~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 143 AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp TTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 5678888999999999886543
No 181
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.57 E-value=1.1e-07 Score=75.37 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=53.5
Q ss_pred HcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------------
Q 042963 10 KARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------ 49 (171)
Q Consensus 10 ~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------ 49 (171)
...+++|++|||+|| +|+|||+|+++++.|+++++..++.
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d 193 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMG 193 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEEC
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEEC
Confidence 456889999999997 7999999999999999998776542
Q ss_pred ------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 ------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++++.+.|||||++++.+...
T Consensus 194 ~p~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 194 YVHKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CcccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 67888899999999998876543
No 182
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.57 E-value=9e-08 Score=73.90 Aligned_cols=67 Identities=22% Similarity=0.248 Sum_probs=52.0
Q ss_pred HHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhch-------------------
Q 042963 5 SFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGL------------------- 48 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl------------------- 48 (171)
+.+...+.+.++.+|||||| +|+|+|+|+++++.|+++++..|+
T Consensus 50 ~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 129 (239)
T 2hnk_A 50 QFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLI 129 (239)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHH
Confidence 34445556788999999997 799999999999999988643221
Q ss_pred ----------------H---------------HHHHHHHhccccCcEEEEEccc
Q 042963 49 ----------------Q---------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 49 ----------------~---------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
. .+++.+.++|||||++++.++.
T Consensus 130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 130 DSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp HCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred hhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 1 5667888999999999886543
No 183
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.55 E-value=1.6e-07 Score=73.18 Aligned_cols=60 Identities=20% Similarity=0.107 Sum_probs=52.5
Q ss_pred CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------------
Q 042963 13 VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------------- 49 (171)
+++|++|||||| +|+|+|+++.+++.|+++++..|+.
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 478999999998 7999999999999999999887764
Q ss_pred -------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 -------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.++.+..+.|+++|+++++.+..
T Consensus 99 mGg~lI~~IL~~~~~~l~~~~~lIlqp~~~ 128 (230)
T 3lec_A 99 MGGRLIADILNNDIDKLQHVKTLVLQPNNR 128 (230)
T ss_dssp ECHHHHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred CchHHHHHHHHHHHHHhCcCCEEEEECCCC
Confidence 66778888999999999987643
No 184
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.55 E-value=5e-08 Score=74.75 Aligned_cols=54 Identities=19% Similarity=0.117 Sum_probs=44.2
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhc-----h--------H-------------HHH
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAG-----L--------Q-------------QFF 52 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~g-----l--------~-------------~~~ 52 (171)
++++.+|||||| +|+|+|+|+.|++.|+++..... + . .++
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~l 125 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTSVI 125 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSGGG
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHHHH
Confidence 478999999998 89999999999999998722110 0 0 678
Q ss_pred HHHHhccccCcEEE
Q 042963 53 GCCESLLAEHGLLL 66 (171)
Q Consensus 53 ~~~~r~LkpgG~l~ 66 (171)
++++++|||||+++
T Consensus 126 ~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 126 LRLPELAAPDAHFL 139 (226)
T ss_dssp GGHHHHEEEEEEEE
T ss_pred HHHHHHcCCCcEEE
Confidence 89999999999997
No 185
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.54 E-value=3.4e-08 Score=81.39 Aligned_cols=105 Identities=10% Similarity=0.131 Sum_probs=68.6
Q ss_pred HHHHHHHcC-CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------
Q 042963 4 VSFLIEKAR-VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------- 49 (171)
Q Consensus 4 ~~~ll~~l~-l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~----------------- 49 (171)
+..+++.++ ++++.+|||||| +++++|+ +++++.|++. .++.
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~~~~~~D~v~ 272 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL---SGIEHVGGDMFASVPQGDAMI 272 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---TTEEEEECCTTTCCCCEEEEE
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc---CCCEEEeCCcccCCCCCCEEE
Confidence 356777776 888999999998 7899999 9999888752 1111
Q ss_pred --------------HHHHHHHhccccCcEEEEEcccCCCcccccccC-ccchhhhc--ccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 --------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRL-SPGFMKEY--VFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 --------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~-~~~~~~~~--ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++|||||+++|.+...+......... ...++.-. ..+++...+..++.+.++++||
T Consensus 273 ~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf 352 (372)
T 1fp1_D 273 LKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGF 352 (372)
T ss_dssp EESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTC
T ss_pred EecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCC
Confidence 789999999999999999876554321100000 00011100 1234555677777777777773
No 186
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.54 E-value=9.6e-08 Score=76.29 Aligned_cols=104 Identities=8% Similarity=-0.070 Sum_probs=67.1
Q ss_pred HHHHHHHHcCCC-CCCeEEEeCC-------------------eEEEEcCCHHHHHHHHHHHHHhc---------------
Q 042963 3 KVSFLIEKARVS-KGHDVLFLRL-------------------DYTGITLSEEQLKYTEMKVKEAG--------------- 47 (171)
Q Consensus 3 k~~~ll~~l~l~-~g~rVLDIGc-------------------~VtgId~S~~~~~~A~~~~~~~g--------------- 47 (171)
.+.+.++.|... .-.+|||||| +|++||.|+.|++.|++++...+
T Consensus 65 fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 65 WMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPA 144 (277)
T ss_dssp HHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHH
T ss_pred HHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChh
Confidence 455666666543 3478999998 79999999999999998864311
Q ss_pred -----------hH-----------------------HHHHHHHhccccCcEEEEEcccCCCcccccccCccchhhhcccC
Q 042963 48 -----------LQ-----------------------QFFGCCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFP 93 (171)
Q Consensus 48 -----------l~-----------------------~~~~~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp 93 (171)
++ .+++++++.|+|||+|++...+..... .......+.+...--|
T Consensus 145 ~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p-~~~~~~~~~~~~~g~p 223 (277)
T 3giw_A 145 SILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAP-QEVGRVAREYAARNMP 223 (277)
T ss_dssp HHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSH-HHHHHHHHHHHHTTCC
T ss_pred hhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCH-HHHHHHHHHHHhcCCC
Confidence 00 478999999999999999877654210 0000011111111112
Q ss_pred CCcCCCHHHHHHHHH
Q 042963 94 GGCLPSLNRITSTMT 108 (171)
Q Consensus 94 ~~~lp~~~~l~~~~~ 108 (171)
..+-+.+++...+.
T Consensus 224 -~~~rs~~ei~~~f~ 237 (277)
T 3giw_A 224 -MRLRTHAEAEEFFE 237 (277)
T ss_dssp -CCCCCHHHHHHTTT
T ss_pred -CccCCHHHHHHHhC
Confidence 24567888888774
No 187
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.52 E-value=2e-07 Score=73.16 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=52.6
Q ss_pred CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------------
Q 042963 13 VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------------- 49 (171)
+++|++|||||| +|+|+|+++.+++.|+++++..|+.
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 478999999998 7999999999999999999887763
Q ss_pred -------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 -------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.++.+..+.|+++|+++++.+..
T Consensus 99 mGg~lI~~IL~~~~~~L~~~~~lIlq~~~~ 128 (244)
T 3gnl_A 99 MGGTLIRTILEEGAAKLAGVTKLILQPNIA 128 (244)
T ss_dssp ECHHHHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred CchHHHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 66788889999999999987643
No 188
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.52 E-value=2.9e-07 Score=75.14 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=34.5
Q ss_pred HHHHHcC-CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhc
Q 042963 6 FLIEKAR-VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 6 ~ll~~l~-l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~g 47 (171)
.+.+.+. ..++.+|||+|| +|+|||+|+.+++.|+++++..+
T Consensus 143 ~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~g 199 (332)
T 2igt_A 143 WLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAG 199 (332)
T ss_dssp HHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 3444443 567899999998 89999999999999999987655
No 189
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.52 E-value=7.6e-08 Score=78.24 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=50.2
Q ss_pred HHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH----------------------
Q 042963 7 LIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------------- 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~---------------------- 49 (171)
+.+.+.+.++.+|||||| +|+|+|+| +|++.|+++++..++.
T Consensus 30 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 108 (328)
T 1g6q_1 30 IIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDI 108 (328)
T ss_dssp HHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEE
T ss_pred HHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccE
Confidence 445567788999999998 89999999 6999999998776542
Q ss_pred -----------------HHHHHHHhccccCcEEEE
Q 042963 50 -----------------QFFGCCESLLAEHGLLLL 67 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i 67 (171)
.+++++.++|||||+++.
T Consensus 109 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 109 IISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 567888999999999974
No 190
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.52 E-value=2.1e-07 Score=79.65 Aligned_cols=41 Identities=10% Similarity=0.143 Sum_probs=36.0
Q ss_pred HHHcCCC--CCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 8 IEKARVS--KGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 8 l~~l~l~--~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
...++++ +|++|||+|| +|+|+|+|+.+++.+++++++.|+
T Consensus 108 ~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~ 167 (479)
T 2frx_A 108 VAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI 167 (479)
T ss_dssp HHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred HHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3567777 9999999997 799999999999999999887664
No 191
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.50 E-value=2.2e-07 Score=83.90 Aligned_cols=67 Identities=16% Similarity=0.251 Sum_probs=54.8
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh------chH----------
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA------GLQ---------- 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~------gl~---------- 49 (171)
.++.+++.+...++.+|||||| +|+|||+|++|++.|+++++.. ++.
T Consensus 709 Rle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 709 RVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 5677888888889999999998 6999999999999999876532 211
Q ss_pred ---------------------------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ---------------------------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ---------------------------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++++.++|||| .+++.+.
T Consensus 789 dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 789 EFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp SCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred hCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 4789999999999 7777653
No 192
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.49 E-value=3.5e-07 Score=76.43 Aligned_cols=36 Identities=22% Similarity=0.150 Sum_probs=32.1
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
+++|.+|||+|| +|+|+|+|+.+++.|+++++..++
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~ 261 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGL 261 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred hcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCC
Confidence 457999999998 799999999999999999876654
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.45 E-value=2e-07 Score=74.90 Aligned_cols=56 Identities=14% Similarity=0.320 Sum_probs=47.4
Q ss_pred CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhc--------hH--------------------
Q 042963 14 SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAG--------LQ-------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~g--------l~-------------------- 49 (171)
.+..+|||||| +|++||+|+++++.|+++....+ +.
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45789999997 79999999999999999865431 11
Q ss_pred -----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.++++|||||+++++.
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 58899999999999999875
No 194
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.44 E-value=1.1e-08 Score=78.75 Aligned_cols=36 Identities=11% Similarity=0.032 Sum_probs=32.9
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
..++.+|||||| +|+|+|+|+.+++.|+++++..++
T Consensus 76 ~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 125 (241)
T 3gdh_A 76 SFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGI 125 (241)
T ss_dssp HSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred ccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 348999999998 899999999999999999988776
No 195
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.44 E-value=2.3e-07 Score=72.95 Aligned_cols=39 Identities=13% Similarity=0.063 Sum_probs=34.4
Q ss_pred HHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH
Q 042963 7 LIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE 45 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~ 45 (171)
+...+.++++.+|||||| +|+|||+++++++.|+++++.
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~ 82 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLEL 82 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTS
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHh
Confidence 445677889999999997 899999999999999998765
No 196
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.43 E-value=2.6e-07 Score=73.73 Aligned_cols=45 Identities=13% Similarity=0.093 Sum_probs=37.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 4 VSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
++.+++.+...++.+|||||| +|+|+|+|+++++.|+++++..++
T Consensus 112 v~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l 171 (284)
T 1nv8_A 112 VELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGV 171 (284)
T ss_dssp HHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 345666665568889999998 799999999999999999876654
No 197
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.43 E-value=3.1e-07 Score=69.33 Aligned_cols=85 Identities=14% Similarity=0.092 Sum_probs=57.9
Q ss_pred HHHHHHcC-CCCCCeEEEeCC-----------eEEEEcCCHHHHHHHHHHHHHhch-----H--------------HHHH
Q 042963 5 SFLIEKAR-VSKGHDVLFLRL-----------DYTGITLSEEQLKYTEMKVKEAGL-----Q--------------QFFG 53 (171)
Q Consensus 5 ~~ll~~l~-l~~g~rVLDIGc-----------~VtgId~S~~~~~~A~~~~~~~gl-----~--------------~~~~ 53 (171)
+.+++.+. ..++.+|||||| +|+|+|+|+..+......+....+ + .+++
T Consensus 56 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~ 135 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLE 135 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEETCTTCHHHHHCCSCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHH
T ss_pred HHHHHHHhccCCCCeEEEECCcCCHHHHHhhccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHH
Confidence 34566554 578899999998 899999998722111111101001 1 7899
Q ss_pred HHHhccccCcEEEEEcccCCCcccccccCccchhhhcccCCCcCCCHHHHHHHHHhcCC
Q 042963 54 CCESLLAEHGLLLLQFSSVPDQCYDEHRLSPGFMKEYVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 54 ~~~r~LkpgG~l~i~~i~~~~~~~~~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
+++++|+|||++++.+... ..++..++.+.++++|+
T Consensus 136 ~~~~~L~~gG~l~i~~~~~-----------------------~~~~~~~~~~~l~~~Gf 171 (215)
T 2zfu_A 136 EANRVLKPGGLLKVAEVSS-----------------------RFEDVRTFLRAVTKLGF 171 (215)
T ss_dssp HHHHHEEEEEEEEEEECGG-----------------------GCSCHHHHHHHHHHTTE
T ss_pred HHHHhCCCCeEEEEEEcCC-----------------------CCCCHHHHHHHHHHCCC
Confidence 9999999999999865321 12378889999999883
No 198
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.41 E-value=1.2e-07 Score=78.75 Aligned_cols=56 Identities=23% Similarity=0.220 Sum_probs=47.7
Q ss_pred cCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH--------------------------
Q 042963 11 ARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ-------------------------- 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~-------------------------- 49 (171)
..+.+|.+|||||| +|+|||.|+ |++.|++.++..|+.
T Consensus 79 ~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~ 157 (376)
T 4hc4_A 79 WAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEW 157 (376)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCC
T ss_pred HHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeec
Confidence 34568999999998 899999995 899999999887764
Q ss_pred ------------HHHHHHHhccccCcEEEE
Q 042963 50 ------------QFFGCCESLLAEHGLLLL 67 (171)
Q Consensus 50 ------------~~~~~~~r~LkpgG~l~i 67 (171)
.++....++|||||+++-
T Consensus 158 ~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 158 MGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccccchhhhHHHHHHhhCCCCceECC
Confidence 667778899999999874
No 199
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.41 E-value=5.7e-07 Score=76.14 Aligned_cols=42 Identities=17% Similarity=0.118 Sum_probs=36.9
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
+...+++++|++|||+|| +|+|+|+|+.+++.+++++++.|+
T Consensus 251 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~ 309 (450)
T 2yxl_A 251 ASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI 309 (450)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC
Confidence 456679999999999997 799999999999999999876654
No 200
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.40 E-value=3.2e-07 Score=73.32 Aligned_cols=59 Identities=8% Similarity=0.076 Sum_probs=52.2
Q ss_pred CCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH----------------------------
Q 042963 13 VSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~---------------------------- 49 (171)
+++|++|||+|| +|+++|+++..++.++++++..+++
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~ 202 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCC
Confidence 589999999997 8999999999999999999988775
Q ss_pred ---HHHHHHHhccccCcEEEEEccc
Q 042963 50 ---QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ---~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
.++..+.+.|||||.+.+++..
T Consensus 203 ~~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 203 RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHcCCCCEEEEEeee
Confidence 6788888999999998777543
No 201
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.38 E-value=6e-07 Score=72.41 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=48.6
Q ss_pred CCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH--hch-----H-------------------
Q 042963 12 RVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE--AGL-----Q------------------- 49 (171)
Q Consensus 12 ~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~--~gl-----~------------------- 49 (171)
...++.+|||||| +|++||+|+++++.|+++... .++ .
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 92 SHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred hCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 3467789999997 899999999999999998654 122 1
Q ss_pred ------------------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.++++++++|||||+++++..
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 478999999999999998763
No 202
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.36 E-value=7.8e-07 Score=72.76 Aligned_cols=57 Identities=14% Similarity=0.220 Sum_probs=46.7
Q ss_pred CCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh--ch-----H-------------------
Q 042963 12 RVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA--GL-----Q------------------- 49 (171)
Q Consensus 12 ~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~--gl-----~------------------- 49 (171)
...++.+|||||| +|++||+|+++++.|+++.... ++ .
T Consensus 117 ~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 117 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred hCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 4567789999997 8999999999999999986531 22 1
Q ss_pred -------------------HHHHHHHhccccCcEEEEE
Q 042963 50 -------------------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~i~ 68 (171)
.+++.+.++|||||+++++
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 5788889999999999886
No 203
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.36 E-value=4.2e-07 Score=73.19 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=46.9
Q ss_pred CCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh-------chH-------------------
Q 042963 12 RVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA-------GLQ------------------- 49 (171)
Q Consensus 12 ~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~-------gl~------------------- 49 (171)
..+++.+|||||| +|++||+|+++++.|+++.... .+.
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 92 SHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred cCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 3467899999997 8999999999999999876320 000
Q ss_pred -------------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.++++++++|||||+++++.
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 56889999999999999874
No 204
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.36 E-value=8.9e-07 Score=66.58 Aligned_cols=32 Identities=34% Similarity=0.536 Sum_probs=27.8
Q ss_pred HHHHHHHHcC-CCCCCeEEEeCC--------------eEEEEcCCHH
Q 042963 3 KVSFLIEKAR-VSKGHDVLFLRL--------------DYTGITLSEE 34 (171)
Q Consensus 3 k~~~ll~~l~-l~~g~rVLDIGc--------------~VtgId~S~~ 34 (171)
|+..+.++.+ +++|++|||+|| +|+|||+|+.
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~ 58 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEM 58 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCC
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccc
Confidence 7788888877 589999999998 6999999973
No 205
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.35 E-value=6.1e-07 Score=75.47 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=36.7
Q ss_pred HHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhc
Q 042963 6 FLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~g 47 (171)
.+...+++++|++|||+|| +|+|+|+|+.+++.++++++..|
T Consensus 237 ~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g 294 (429)
T 1sqg_A 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG 294 (429)
T ss_dssp THHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT
T ss_pred HHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC
Confidence 3456778999999999997 79999999999999999987654
No 206
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.34 E-value=1.5e-06 Score=67.39 Aligned_cols=40 Identities=3% Similarity=-0.090 Sum_probs=32.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC------------------eEEEEcCCHHHHHHHHHHH
Q 042963 4 VSFLIEKARVSKGHDVLFLRL------------------DYTGITLSEEQLKYTEMKV 43 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc------------------~VtgId~S~~~~~~A~~~~ 43 (171)
++.+++.+...++.+|||+|| +|+|+|+|+++++.|++++
T Consensus 40 ~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~ 97 (250)
T 1o9g_A 40 FQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNL 97 (250)
T ss_dssp HHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHH
Confidence 344555565567899999998 5999999999999998654
No 207
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.34 E-value=1.3e-06 Score=69.28 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=32.9
Q ss_pred HHHHHHcCCCCCCeEEEeCC---------------eEEEEcC-CHHHHHHHHHHH
Q 042963 5 SFLIEKARVSKGHDVLFLRL---------------DYTGITL-SEEQLKYTEMKV 43 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc---------------~VtgId~-S~~~~~~A~~~~ 43 (171)
+.+++...+.+|.+|||||| +|+|+|+ |+++++.|++++
T Consensus 69 ~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 69 DTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp HHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHH
Confidence 34445556678999999997 8999999 899999999988
No 208
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.32 E-value=1.7e-06 Score=71.83 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=31.8
Q ss_pred CCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 14 SKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 14 ~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
++|++|||+|| +|+|+|+|+++++.|+++++..++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~ 265 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV 265 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 58999999998 899999999999999999876654
No 209
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.32 E-value=9.2e-07 Score=73.25 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=31.1
Q ss_pred CCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 15 KGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 15 ~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
+|++|||+|| +|+|+|+|+.+++.|+++++..++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~ 256 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGL 256 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 8899999998 899999999999999999876654
No 210
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.28 E-value=1.4e-06 Score=75.91 Aligned_cols=61 Identities=18% Similarity=0.106 Sum_probs=48.6
Q ss_pred CCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch-H-----------------------------
Q 042963 14 SKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL-Q----------------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl-~----------------------------- 49 (171)
..+.||||||| +|||||+|+.+++.|+.++.+.|. .
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 45679999999 999999999999999999887652 1
Q ss_pred ---------HHHHHHHhccccCcEEEEEcccCCC
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQFSSVPD 74 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~~i~~~~ 74 (171)
.....+.+.|+++|+.++..+...+
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e 178 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTT
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEecccc
Confidence 2234567779999998887776643
No 211
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.28 E-value=2.5e-06 Score=70.88 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=32.3
Q ss_pred CCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 14 SKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 14 ~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
.+|.+|||+|| +|+|||+|+++++.|+++++..++
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl 268 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKL 268 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 68999999998 899999999999999999987666
No 212
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.28 E-value=3.8e-07 Score=74.44 Aligned_cols=103 Identities=4% Similarity=-0.017 Sum_probs=65.1
Q ss_pred HHHc--CCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHH---------H--hchH---------
Q 042963 8 IEKA--RVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVK---------E--AGLQ--------- 49 (171)
Q Consensus 8 l~~l--~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~---------~--~gl~--------- 49 (171)
++.+ +++++.+|||||| +++++|+ +++++.|++... + .+.+
T Consensus 179 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh 257 (352)
T 1fp2_A 179 LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILH 257 (352)
T ss_dssp HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGG
T ss_pred HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhc
Confidence 4455 5778899999998 7999999 999988875210 0 0001
Q ss_pred --------HHHHHHHhcccc---CcEEEEEcccCCCccccc-ccCccchhhh--cccCCCcCCCHHHHHHHHHhcCC
Q 042963 50 --------QFFGCCESLLAE---HGLLLLQFSSVPDQCYDE-HRLSPGFMKE--YVFPGGCLPSLNRITSTMTSSSR 112 (171)
Q Consensus 50 --------~~~~~~~r~Lkp---gG~l~i~~i~~~~~~~~~-~~~~~~~~~~--~ifp~~~lp~~~~l~~~~~~~g~ 112 (171)
.++++++++||| ||++++.+...+...... ......+..- ..+ ++...+..++.+.++++|+
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~g~~~t~~e~~~ll~~aGf 333 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACL-NGKERNEEEWKKLFIEAGF 333 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGG-TCCCEEHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhc-cCCCCCHHHHHHHHHHCCC
Confidence 788999999999 999999876554321000 0000001110 012 2455677888888888874
No 213
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.26 E-value=1.9e-06 Score=68.70 Aligned_cols=60 Identities=13% Similarity=0.186 Sum_probs=48.6
Q ss_pred cCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh-------chH------------------
Q 042963 11 ARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA-------GLQ------------------ 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~-------gl~------------------ 49 (171)
+...++.+|||||| +|++||+|+++++.|+++.... .+.
T Consensus 74 ~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (283)
T 2i7c_A 74 TVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYD 153 (283)
T ss_dssp TTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred hcCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCce
Confidence 34567789999997 8999999999999999886431 111
Q ss_pred -------------------HHHHHHHhccccCcEEEEEcc
Q 042963 50 -------------------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 -------------------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++.++++|||||+++++..
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 678899999999999998753
No 214
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.26 E-value=2.4e-06 Score=70.95 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=31.9
Q ss_pred CCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 14 SKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 14 ~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
.+|.+|||+|| +|+|||+|+++++.|+++++..++
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~ 260 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHL 260 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 78999999998 799999999999999999877654
No 215
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.26 E-value=1.4e-06 Score=69.12 Aligned_cols=56 Identities=18% Similarity=0.285 Sum_probs=46.6
Q ss_pred CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh--ch-----H---------------------
Q 042963 14 SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA--GL-----Q--------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~--gl-----~--------------------- 49 (171)
..+.+|||||| +|++||+++++++.|+++.... ++ .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 45789999997 8999999999999999886431 11 1
Q ss_pred ----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.++++|||||+++++.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 58999999999999999875
No 216
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.23 E-value=1.6e-06 Score=69.55 Aligned_cols=56 Identities=16% Similarity=0.288 Sum_probs=45.9
Q ss_pred CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH--hch-----H---------------------
Q 042963 14 SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE--AGL-----Q--------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~--~gl-----~--------------------- 49 (171)
..+.+|||||| +|++||+|+++++.|+++... .++ .
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45689999997 899999999999999998643 111 1
Q ss_pred -----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.++++|||||+++++.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 46788999999999999874
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.23 E-value=1.3e-06 Score=70.89 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=46.2
Q ss_pred CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh--ch-----H--------------------
Q 042963 13 VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA--GL-----Q-------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~--gl-----~-------------------- 49 (171)
..++.+|||||| +|++||+|+++++.|+++.+.. ++ .
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 356689999997 8999999999999999986432 22 1
Q ss_pred -----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.++++|+|||+++++.
T Consensus 186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 56788999999999999875
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.22 E-value=1.3e-06 Score=70.97 Aligned_cols=57 Identities=16% Similarity=0.244 Sum_probs=46.5
Q ss_pred CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH--hch-----H--------------------
Q 042963 13 VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE--AGL-----Q-------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~--~gl-----~-------------------- 49 (171)
..++.+|||||| +|+++|+|+++++.|+++.+. .++ .
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 356789999997 899999999999999998653 111 1
Q ss_pred -----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.+.++|||||+++++.
T Consensus 194 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 194 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 56788999999999998864
No 219
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.22 E-value=2.4e-06 Score=76.20 Aligned_cols=56 Identities=27% Similarity=0.376 Sum_probs=47.8
Q ss_pred CCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------------
Q 042963 14 SKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl~----------------------------- 49 (171)
.+|.+|||+|| +||+||+|+.+++.|+++++..|+.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 47999999998 6999999999999999998876542
Q ss_pred --------------------HHHHHHHhccccCcEEEEEc
Q 042963 50 --------------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 --------------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.+.++|+|||++++.+
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 34778889999999998765
No 220
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.19 E-value=3.3e-07 Score=71.13 Aligned_cols=64 Identities=9% Similarity=0.123 Sum_probs=46.3
Q ss_pred HHHHcCCCCCCeEEEeCC--------------------eEEEEcCCHHHHHHHHHHHH----------H----h-----c
Q 042963 7 LIEKARVSKGHDVLFLRL--------------------DYTGITLSEEQLKYTEMKVK----------E----A-----G 47 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc--------------------~VtgId~S~~~~~~A~~~~~----------~----~-----g 47 (171)
+.+.+...++.+|||||| +|+|||+|++|++.|+.... . . .
T Consensus 73 l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~ 152 (236)
T 2bm8_A 73 YHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMA 152 (236)
T ss_dssp HHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSC
T ss_pred HHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCC
Confidence 334444456789999997 69999999999887763210 0 0 0
Q ss_pred hH------------HHHHHHHh-ccccCcEEEEEcc
Q 042963 48 LQ------------QFFGCCES-LLAEHGLLLLQFS 70 (171)
Q Consensus 48 l~------------~~~~~~~r-~LkpgG~l~i~~i 70 (171)
++ .+++++.+ +|||||++++.++
T Consensus 153 fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 153 HPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 11 67888997 9999999999764
No 221
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.17 E-value=4.2e-06 Score=66.43 Aligned_cols=55 Identities=4% Similarity=0.062 Sum_probs=47.0
Q ss_pred CCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH----------------------------
Q 042963 14 SKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ---------------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~---------------------------- 49 (171)
.+..+|||||| +|+++|+++.|++.+++++...|+.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 55779999999 9999999999999999999887764
Q ss_pred -------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..| ++.+.|+|+|.++-..
T Consensus 211 Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred hhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 445 7889999999887644
No 222
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.17 E-value=1.6e-06 Score=70.56 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=46.2
Q ss_pred CeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh---chH----------------------------
Q 042963 17 HDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA---GLQ---------------------------- 49 (171)
Q Consensus 17 ~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~---gl~---------------------------- 49 (171)
.+|||||| +|++||+++++++.|+++.... .+.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 49999997 8999999999999999875321 111
Q ss_pred ----------HHHHHHHhccccCcEEEEEcccC
Q 042963 50 ----------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ----------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++.++++|||||+++++....
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 78999999999999999887543
No 223
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.16 E-value=2.9e-06 Score=68.57 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=47.0
Q ss_pred CCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH--hc-h-----H-------------------
Q 042963 13 VSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE--AG-L-----Q------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~--~g-l-----~------------------- 49 (171)
..++.+|||||| +|++||+|+++++.|+++... .+ + .
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 356789999997 899999999999999987643 11 1 1
Q ss_pred ---------------------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ---------------------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ---------------------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++.++++|||||+++++..
T Consensus 155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 458899999999999998753
No 224
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.15 E-value=2.4e-06 Score=67.97 Aligned_cols=56 Identities=18% Similarity=0.299 Sum_probs=45.8
Q ss_pred CCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHh--ch------------H--------------
Q 042963 13 VSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEA--GL------------Q-------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~--gl------------~-------------- 49 (171)
..++.+|||||| +|++||+|+++++.|+++. .. ++ .
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~ 151 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNR 151 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCC
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccC
Confidence 456789999997 8999999999999999876 21 11 0
Q ss_pred ----------------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ----------------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ----------------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.++++|+|||+++++.
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 46888999999999998864
No 225
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.13 E-value=5.2e-07 Score=73.78 Aligned_cols=102 Identities=8% Similarity=0.047 Sum_probs=66.6
Q ss_pred HHHHHc--CCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH------------------
Q 042963 6 FLIEKA--RVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------ 49 (171)
Q Consensus 6 ~ll~~l--~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~------------------ 49 (171)
.+++.+ +++++.+|||||| +++++|+ +.+++.|++. .++.
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~~~~~~D~v~~ 257 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN---ENLNFVGGDMFKSIPSADAVLL 257 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC---SSEEEEECCTTTCCCCCSEEEE
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC---CCcEEEeCccCCCCCCceEEEE
Confidence 456666 5678899999998 7999999 7888877642 1111
Q ss_pred -------------HHHHHHHhcccc---CcEEEEEcccCCCcccc----cccCccchhhhcccCCCcCCCHHHHHHHHHh
Q 042963 50 -------------QFFGCCESLLAE---HGLLLLQFSSVPDQCYD----EHRLSPGFMKEYVFPGGCLPSLNRITSTMTS 109 (171)
Q Consensus 50 -------------~~~~~~~r~Lkp---gG~l~i~~i~~~~~~~~----~~~~~~~~~~~~ifp~~~lp~~~~l~~~~~~ 109 (171)
.++++++++||| ||+++|.+...++.... ......++.. ...+++...+.+++.+.+++
T Consensus 258 ~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~-~~~~~g~~~t~~e~~~ll~~ 336 (358)
T 1zg3_A 258 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVM-LTMFLGKERTKQEWEKLIYD 336 (358)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHH-HHHHSCCCEEHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHH-hccCCCCCCCHHHHHHHHHH
Confidence 788999999999 99999987655432110 0000001000 11334566678888888888
Q ss_pred cCC
Q 042963 110 SSR 112 (171)
Q Consensus 110 ~g~ 112 (171)
+||
T Consensus 337 aGf 339 (358)
T 1zg3_A 337 AGF 339 (358)
T ss_dssp TTC
T ss_pred cCC
Confidence 874
No 226
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.13 E-value=3e-06 Score=69.10 Aligned_cols=60 Identities=15% Similarity=0.177 Sum_probs=51.2
Q ss_pred CCCCCeEEEeCC-------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------------H
Q 042963 13 VSKGHDVLFLRL-------------DYTGITLSEEQLKYTEMKVKEAGLQ-----------------------------Q 50 (171)
Q Consensus 13 l~~g~rVLDIGc-------------~VtgId~S~~~~~~A~~~~~~~gl~-----------------------------~ 50 (171)
+++|.+|||+|| +|+|+|+|+.+++.|+++++..++. .
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~~~~~ 272 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPKFAHK 272 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHHTTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTTTGGG
T ss_pred cCCCCEEEEccCccCHHHHhccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcHhHHH
Confidence 468999999997 7999999999999999999877652 5
Q ss_pred HHHHHHhccccCcEEEEEcccC
Q 042963 51 FFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 51 ~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
+++.+.++|+|||.+++.+...
T Consensus 273 ~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 273 FIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp GHHHHHHHEEEEEEEEEEEEES
T ss_pred HHHHHHHHcCCCCEEEEEEeec
Confidence 7788889999999988876544
No 227
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.10 E-value=4.8e-06 Score=61.96 Aligned_cols=32 Identities=22% Similarity=0.080 Sum_probs=27.3
Q ss_pred HHHHHHHHcC-CCCCCeEEEeCC------------------eEEEEcCCHH
Q 042963 3 KVSFLIEKAR-VSKGHDVLFLRL------------------DYTGITLSEE 34 (171)
Q Consensus 3 k~~~ll~~l~-l~~g~rVLDIGc------------------~VtgId~S~~ 34 (171)
|+..+.++.+ ++++++|||||| +|+|+|+|+.
T Consensus 9 kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 9 KLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp HHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 6777888877 689999999998 4999999974
No 228
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.10 E-value=1e-05 Score=68.10 Aligned_cols=46 Identities=20% Similarity=0.130 Sum_probs=41.1
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
-++.+++.+++.++.+|||+|| +|+|+|+|+++++.|+++++..++
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~ 333 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGL 333 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 3567788889999999999998 899999999999999999987665
No 229
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.08 E-value=8.8e-06 Score=68.55 Aligned_cols=56 Identities=9% Similarity=0.131 Sum_probs=46.0
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------------
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------------------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~----------------------------- 49 (171)
+.++.+|||+|| +|+|||+|+++++.|+++++..++.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~~fD~Vv~dPPr~g~~ 367 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVKGFDTVIVDPPRAGLH 367 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCTTCSEEEECCCTTCSC
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCccCCCEEEEcCCccchH
Confidence 688999999998 8999999999999999998766532
Q ss_pred -HHHHHHHhccccCcEEEEEc
Q 042963 50 -QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.+ +.|+|||.+++.+
T Consensus 368 ~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 368 PRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp HHHHHHH-HHHCCSEEEEEES
T ss_pred HHHHHHH-HhcCCCcEEEEEC
Confidence 355555 4589999888864
No 230
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.07 E-value=7.7e-06 Score=67.53 Aligned_cols=44 Identities=30% Similarity=0.259 Sum_probs=38.7
Q ss_pred HHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhchH
Q 042963 5 SFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGLQ 49 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl~ 49 (171)
+.++..+ .+++.+|||+|| +|+|+|+|+.|++.|+++++..|+.
T Consensus 208 ~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~ 267 (373)
T 3tm4_A 208 NAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL 267 (373)
T ss_dssp HHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG
T ss_pred HHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 4456666 899999999998 7999999999999999999988873
No 231
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.06 E-value=1.4e-05 Score=65.93 Aligned_cols=58 Identities=17% Similarity=0.141 Sum_probs=45.9
Q ss_pred CCCCCCeEEEeC---------------CeEEEEcCCHHHHHHHHHHHHHhchH---------------------------
Q 042963 12 RVSKGHDVLFLR---------------LDYTGITLSEEQLKYTEMKVKEAGLQ--------------------------- 49 (171)
Q Consensus 12 ~l~~g~rVLDIG---------------c~VtgId~S~~~~~~A~~~~~~~gl~--------------------------- 49 (171)
...+|.+||||| .+|+|+|+|++|++.|+++++..|+.
T Consensus 169 ~~~~~~~VLDlGG~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 169 GDLENKDIFVLGDDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TCSTTCEEEEESCTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 445789999998 28999999999999999998876541
Q ss_pred ---------HHHHHHHhccccCcEEEEEc
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++++.++|||||++++..
T Consensus 249 ~p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 249 PPETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CCSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred CCCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 45678888899998654333
No 232
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.06 E-value=5.1e-06 Score=60.89 Aligned_cols=34 Identities=18% Similarity=0.035 Sum_probs=28.2
Q ss_pred HHHHHHcCC--CCCCeEEEeCC-------------eEEEEcCCHHHHHH
Q 042963 5 SFLIEKARV--SKGHDVLFLRL-------------DYTGITLSEEQLKY 38 (171)
Q Consensus 5 ~~ll~~l~l--~~g~rVLDIGc-------------~VtgId~S~~~~~~ 38 (171)
+.+++.+.. .++.+|||||| +|+|||+|++|++.
T Consensus 11 ~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 11 YTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES 59 (170)
T ss_dssp HHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT
T ss_pred HHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc
Confidence 455566655 67889999998 79999999999987
No 233
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.04 E-value=2.4e-06 Score=71.64 Aligned_cols=68 Identities=10% Similarity=0.050 Sum_probs=47.6
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC-----------------------eEEEEcCCHHHHHHHH----------------HHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL-----------------------DYTGITLSEEQLKYTE----------------MKV 43 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc-----------------------~VtgId~S~~~~~~A~----------------~~~ 43 (171)
.++++++.+.. ++.+|||||| +|+|||+|++|..... +..
T Consensus 205 ~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l~ 283 (419)
T 3sso_A 205 HYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIA 283 (419)
T ss_dssp HHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHHH
T ss_pred HHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhhh
Confidence 45667776654 5689999998 6999999999842100 000
Q ss_pred H-HhchH--------------HHHHHHHhccccCcEEEEEccc
Q 042963 44 K-EAGLQ--------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 44 ~-~~gl~--------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
. ...++ .+|++++++|||||++++.++.
T Consensus 284 ~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 284 RRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 0 01111 7899999999999999998765
No 234
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.04 E-value=3.1e-07 Score=73.25 Aligned_cols=33 Identities=15% Similarity=0.101 Sum_probs=29.3
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC-------------eEEEEcCCHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL-------------DYTGITLSEEQL 36 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc-------------~VtgId~S~~~~ 36 (171)
|+..++++..+++|++|||||| +|+|||+|+ |.
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~ 115 (276)
T 2wa2_A 70 KLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LG 115 (276)
T ss_dssp HHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CC
T ss_pred HHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hh
Confidence 7888888877899999999998 799999998 53
No 235
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.04 E-value=1.9e-05 Score=58.94 Aligned_cols=41 Identities=12% Similarity=-0.029 Sum_probs=34.4
Q ss_pred HHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 8 IEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
+...+..++.+|||+|| +|+|+|+|+.+++.|+++++..++
T Consensus 42 ~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 97 (207)
T 1wy7_A 42 AYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG 97 (207)
T ss_dssp HHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT
T ss_pred HHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 34446778999999998 699999999999999999876553
No 236
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.02 E-value=3e-06 Score=60.96 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=27.9
Q ss_pred HHHHHHHHcC-CCCCCeEEEeCC-----------------eEEEEcCCHHHH
Q 042963 3 KVSFLIEKAR-VSKGHDVLFLRL-----------------DYTGITLSEEQL 36 (171)
Q Consensus 3 k~~~ll~~l~-l~~g~rVLDIGc-----------------~VtgId~S~~~~ 36 (171)
|+..+++.+. ++++.+|||||| +|+|+|+|+ ++
T Consensus 9 ~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~ 59 (180)
T 1ej0_A 9 KLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD 59 (180)
T ss_dssp HHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC
T ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc
Confidence 5677788877 789999999997 799999988 54
No 237
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.02 E-value=9e-06 Score=64.01 Aligned_cols=42 Identities=5% Similarity=0.139 Sum_probs=38.5
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVK 44 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~ 44 (171)
-++.+++.+++.++++|||||| +|+|||+|++|++.+++++.
T Consensus 17 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~ 72 (255)
T 3tqs_A 17 VLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYN 72 (255)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHh
Confidence 3678899999999999999998 89999999999999998874
No 238
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.01 E-value=3.6e-07 Score=72.39 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=28.9
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC-------------eEEEEcCCH
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL-------------DYTGITLSE 33 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc-------------~VtgId~S~ 33 (171)
.|+..++++..+++|++|||||| +|+|||+|+
T Consensus 61 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~ 105 (265)
T 2oxt_A 61 AKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT 105 (265)
T ss_dssp HHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC
T ss_pred HHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHcCcEEEEECch
Confidence 37888888877899999999998 799999998
No 239
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.00 E-value=8.9e-06 Score=64.77 Aligned_cols=44 Identities=16% Similarity=0.141 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHh
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEA 46 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~ 46 (171)
-++.+++.++++++++|||||| +|+|||+|+.|++.++++.+..
T Consensus 16 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~ 73 (285)
T 1zq9_A 16 IINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGT 73 (285)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTS
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhc
Confidence 3678899999999999999998 8999999999999999987643
No 240
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.00 E-value=1.1e-05 Score=64.64 Aligned_cols=45 Identities=13% Similarity=0.142 Sum_probs=40.1
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhc
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~g 47 (171)
-++.+++.++++++++|||||| +|+|||+|+.+++.|+++++..+
T Consensus 30 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~ 88 (299)
T 2h1r_A 30 ILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEG 88 (299)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 3677889999999999999998 89999999999999999886544
No 241
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.95 E-value=1.3e-05 Score=63.97 Aligned_cols=41 Identities=10% Similarity=0.237 Sum_probs=37.4
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------e----EEEEcCCHHHHHHHHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------D----YTGITLSEEQLKYTEMKV 43 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~----VtgId~S~~~~~~A~~~~ 43 (171)
-++.+++.++++++++|||||| + |+|||+|++|++.++++.
T Consensus 30 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~ 88 (279)
T 3uzu_A 30 VIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF 88 (279)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc
Confidence 3578899999999999999998 6 999999999999999883
No 242
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.95 E-value=6.7e-06 Score=64.92 Aligned_cols=57 Identities=12% Similarity=0.072 Sum_probs=45.8
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHh-------ch--------------H--------
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEA-------GL--------------Q-------- 49 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~-------gl--------------~-------- 49 (171)
...+.+|||||| +|+++|+++++++.|+++.... .+ +
T Consensus 70 ~~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~~d 149 (262)
T 2cmg_A 70 KKELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQEP 149 (262)
T ss_dssp SSCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESSCC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECCCC
Confidence 345689999997 6999999999999998764220 11 1
Q ss_pred --HHHHHHHhccccCcEEEEEc
Q 042963 50 --QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 --~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.++++|||||+++++.
T Consensus 150 p~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 150 DIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp CHHHHHHHHTTEEEEEEEEEEE
T ss_pred hHHHHHHHHHhcCCCcEEEEEc
Confidence 57999999999999999864
No 243
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.94 E-value=2.9e-05 Score=62.77 Aligned_cols=43 Identities=14% Similarity=0.085 Sum_probs=38.1
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~ 49 (171)
+...+++++|++|||+|| +|+++|+|+++++.+++++++.|+.
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~ 153 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS 153 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 456778999999999997 7999999999999999999887753
No 244
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.93 E-value=1.4e-05 Score=64.29 Aligned_cols=42 Identities=21% Similarity=0.180 Sum_probs=38.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVK 44 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~ 44 (171)
-++++++.++++++++|||||| +|+|||+|+++++.++++++
T Consensus 38 i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~ 93 (295)
T 3gru_A 38 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE 93 (295)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc
Confidence 3678899999999999999998 89999999999999998875
No 245
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.92 E-value=1.8e-05 Score=62.15 Aligned_cols=55 Identities=9% Similarity=-0.052 Sum_probs=45.2
Q ss_pred CCCCeEEEeCC-------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------------------
Q 042963 14 SKGHDVLFLRL-------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc-------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------------- 49 (171)
.+..+|||||| +++|+|+|+.+++.+++++...|..
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~LE~ 183 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLLER 183 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHHHHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHHhhh
Confidence 67889999999 9999999999999999998776643
Q ss_pred ----HHHHHHHhccccCcEEEEEc
Q 042963 50 ----QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ----~~~~~~~r~LkpgG~l~i~~ 69 (171)
..+ ++.+.|+|+|.++-..
T Consensus 184 q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 184 EQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred hchhhHH-HHHHHhcCCCEEEEcC
Confidence 334 6777899998877543
No 246
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.91 E-value=7.2e-06 Score=65.82 Aligned_cols=68 Identities=13% Similarity=0.119 Sum_probs=45.5
Q ss_pred HHHHHHHHc-----CCCCCCeEEEeCC---------------------eEEEEcCCHHHHHHHHH----HHHHhc----h
Q 042963 3 KVSFLIEKA-----RVSKGHDVLFLRL---------------------DYTGITLSEEQLKYTEM----KVKEAG----L 48 (171)
Q Consensus 3 k~~~ll~~l-----~l~~g~rVLDIGc---------------------~VtgId~S~~~~~~A~~----~~~~~g----l 48 (171)
+.+.+++.+ .+++|++|||+|| +|+|||+|+. ++.++- .+.+.. +
T Consensus 46 ~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v~~v~~~i~gD~~~~~~~~~f 124 (290)
T 2xyq_A 46 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-VSDADSTLIGDCATVHTANKW 124 (290)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-BCSSSEEEESCGGGCCCSSCE
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-CCCCEEEEECccccCCccCcc
Confidence 445555544 7899999999999 5999999987 210000 000000 0
Q ss_pred H--------------------------HHHHHHHhccccCcEEEEEccc
Q 042963 49 Q--------------------------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 49 ~--------------------------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
+ .+++++.++|||||+|++..+.
T Consensus 125 D~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 125 DLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp EEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 0 4678899999999999986543
No 247
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.89 E-value=1.7e-05 Score=61.66 Aligned_cols=42 Identities=17% Similarity=0.229 Sum_probs=37.9
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVK 44 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~ 44 (171)
-++.+++.+++.++++|||||| +|+|||+|+++++.++++.+
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhc
Confidence 3577888999999999999998 89999999999999998864
No 248
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.88 E-value=2.8e-06 Score=68.58 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=27.4
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC-------------eEEEEcC----CHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL-------------DYTGITL----SEEQL 36 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc-------------~VtgId~----S~~~~ 36 (171)
|+..++++.-+++|++|||||| +|+|||+ ++.++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~ 120 (305)
T 2p41_A 70 KLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHE 120 (305)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSC
T ss_pred HHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHH
Confidence 6777777756789999999999 4999999 56443
No 249
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.82 E-value=2.2e-05 Score=63.30 Aligned_cols=44 Identities=27% Similarity=0.276 Sum_probs=40.1
Q ss_pred HHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhc
Q 042963 4 VSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~g 47 (171)
++.+++.+++++|.+|||+|| +|+|||+|+++++.|+++++..|
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g 74 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS 74 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 578899999999999999998 79999999999999999987654
No 250
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.80 E-value=2.6e-05 Score=57.59 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=17.6
Q ss_pred HHHHHHHhccccCcEEEEEcc
Q 042963 50 QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++++.++|||||++++..+
T Consensus 126 ~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 126 TLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEEec
Confidence 457889999999999998754
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.78 E-value=6.1e-05 Score=62.79 Aligned_cols=45 Identities=13% Similarity=0.090 Sum_probs=40.3
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------e----------------------------------------EEEEc
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------D----------------------------------------YTGIT 30 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~----------------------------------------VtgId 30 (171)
+.++..++.+++.+|||.+| + |+|+|
T Consensus 191 a~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvD 270 (393)
T 3k0b_A 191 AALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGD 270 (393)
T ss_dssp HHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEE
T ss_pred HHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEE
Confidence 55778889999999999998 3 99999
Q ss_pred CCHHHHHHHHHHHHHhchH
Q 042963 31 LSEEQLKYTEMKVKEAGLQ 49 (171)
Q Consensus 31 ~S~~~~~~A~~~~~~~gl~ 49 (171)
+|+.+++.|+++++..|+.
T Consensus 271 id~~al~~Ar~Na~~~gl~ 289 (393)
T 3k0b_A 271 IDARLIEIAKQNAVEAGLG 289 (393)
T ss_dssp SCHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHHcCCC
Confidence 9999999999999888764
No 252
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.77 E-value=2.4e-05 Score=62.11 Aligned_cols=41 Identities=20% Similarity=0.148 Sum_probs=37.4
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVK 44 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~ 44 (171)
-++.+++.++++++ +|||||| +|+|||+|++|++.+++++.
T Consensus 35 i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~ 89 (271)
T 3fut_A 35 HLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS 89 (271)
T ss_dssp HHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC
Confidence 46789999999999 9999998 89999999999999998864
No 253
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.76 E-value=2.9e-05 Score=60.07 Aligned_cols=34 Identities=9% Similarity=0.150 Sum_probs=30.9
Q ss_pred CCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 15 KGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 15 ~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
++.+|||||| +|+|+|+|++|++.|+++++..++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~ 114 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL 114 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 6889999998 899999999999999999877664
No 254
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.76 E-value=4.7e-05 Score=61.91 Aligned_cols=43 Identities=14% Similarity=0.218 Sum_probs=34.7
Q ss_pred HHHHHHc-CCCCCCeEEEeCC---------------------eEEEEcCCHHHHHHHHHHHHHhc
Q 042963 5 SFLIEKA-RVSKGHDVLFLRL---------------------DYTGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 5 ~~ll~~l-~l~~g~rVLDIGc---------------------~VtgId~S~~~~~~A~~~~~~~g 47 (171)
..+++.+ +.+++.+|||+|| +|+|+|+++.+++.|+.++...|
T Consensus 119 ~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g 183 (344)
T 2f8l_A 119 AYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR 183 (344)
T ss_dssp HHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC
Confidence 4455544 5678899999998 38999999999999999876554
No 255
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.73 E-value=7.6e-05 Score=61.97 Aligned_cols=46 Identities=17% Similarity=0.167 Sum_probs=40.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------e----------------------------------------EEEE
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------D----------------------------------------YTGI 29 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~----------------------------------------VtgI 29 (171)
.+.++..++.+++.+|||++| + |+|+
T Consensus 184 Aa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~Gv 263 (385)
T 3ldu_A 184 AAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGY 263 (385)
T ss_dssp HHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEE
T ss_pred HHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEE
Confidence 345677889999999999998 2 8999
Q ss_pred cCCHHHHHHHHHHHHHhchH
Q 042963 30 TLSEEQLKYTEMKVKEAGLQ 49 (171)
Q Consensus 30 d~S~~~~~~A~~~~~~~gl~ 49 (171)
|+|+.+++.|++++...|+.
T Consensus 264 Did~~ai~~Ar~Na~~~gl~ 283 (385)
T 3ldu_A 264 DIDEESIDIARENAEIAGVD 283 (385)
T ss_dssp ESCHHHHHHHHHHHHHHTCG
T ss_pred ECCHHHHHHHHHHHHHcCCC
Confidence 99999999999999888764
No 256
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.71 E-value=2.7e-05 Score=61.00 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=36.6
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMK 42 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~ 42 (171)
-++.+++.+++.++++|||||| +|+|||+|+.+++.++++
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc
Confidence 3678899999999999999998 899999999999999866
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.69 E-value=0.00011 Score=61.07 Aligned_cols=45 Identities=11% Similarity=0.170 Sum_probs=40.4
Q ss_pred HHHHHHcCCCCCCeEEEeCC--------------e----------------------------------------EEEEc
Q 042963 5 SFLIEKARVSKGHDVLFLRL--------------D----------------------------------------YTGIT 30 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc--------------~----------------------------------------VtgId 30 (171)
+.++..++.+++.+|||.+| + |+|+|
T Consensus 184 aall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvD 263 (384)
T 3ldg_A 184 AAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFD 263 (384)
T ss_dssp HHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEE
T ss_pred HHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEE
Confidence 45778889999999999998 3 99999
Q ss_pred CCHHHHHHHHHHHHHhchH
Q 042963 31 LSEEQLKYTEMKVKEAGLQ 49 (171)
Q Consensus 31 ~S~~~~~~A~~~~~~~gl~ 49 (171)
+|+.+++.|+++++..|+.
T Consensus 264 id~~al~~Ar~Na~~~gl~ 282 (384)
T 3ldg_A 264 FDGRMVEIARKNAREVGLE 282 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHHcCCC
Confidence 9999999999999988864
No 258
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.69 E-value=6e-05 Score=62.53 Aligned_cols=55 Identities=16% Similarity=0.088 Sum_probs=48.2
Q ss_pred CCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh---------------chH--------------
Q 042963 15 KGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA---------------GLQ-------------- 49 (171)
Q Consensus 15 ~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~---------------gl~-------------- 49 (171)
+|.+|||+|| +|+++|++++.++.|+++++.. +++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 7899999997 7999999999999999999877 643
Q ss_pred ------------------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.+.+.|||||.+++.+
T Consensus 127 ~~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 67788889999999888764
No 259
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.65 E-value=4.8e-05 Score=60.46 Aligned_cols=29 Identities=10% Similarity=-0.016 Sum_probs=25.6
Q ss_pred CCCeEEEeCC------------------------eEEEEcCCHHHHHHHHHHH
Q 042963 15 KGHDVLFLRL------------------------DYTGITLSEEQLKYTEMKV 43 (171)
Q Consensus 15 ~g~rVLDIGc------------------------~VtgId~S~~~~~~A~~~~ 43 (171)
++.||||+|| +|+|+|+|++|++.|++.+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 4679999998 4899999999999999863
No 260
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.64 E-value=4.6e-05 Score=59.82 Aligned_cols=42 Identities=12% Similarity=0.077 Sum_probs=37.9
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC------------e--EEEEcCCHHHHHHHHHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL------------D--YTGITLSEEQLKYTEMKVK 44 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc------------~--VtgId~S~~~~~~A~~~~~ 44 (171)
-++.+++.+++++|++|||||| + |+|||+|++|++.++++.+
T Consensus 9 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~l~~~~~~~v~avEid~~~~~~a~~~~~ 64 (252)
T 1qyr_A 9 VIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPF 64 (252)
T ss_dssp HHHHHHHHHCCCTTCCEEEECCTTTTTHHHHHTTCSCEEEECCCHHHHHHHHTCTT
T ss_pred HHHHHHHhcCCCCcCEEEEECCCCcHHHHhhhCCCCeEEEEECCHHHHHHHHHHhc
Confidence 4678899999999999999998 5 9999999999999998764
No 261
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.61 E-value=9.9e-05 Score=54.87 Aligned_cols=36 Identities=8% Similarity=0.078 Sum_probs=31.0
Q ss_pred HHcCCCCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHH
Q 042963 9 EKARVSKGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVK 44 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~ 44 (171)
...+..++.+|||+|| +|+|||+|+++++.|+++++
T Consensus 45 ~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~ 95 (200)
T 1ne2_A 45 YNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG 95 (200)
T ss_dssp HHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT
T ss_pred HhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC
Confidence 3336778999999998 69999999999999998863
No 262
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.60 E-value=0.00011 Score=62.01 Aligned_cols=45 Identities=11% Similarity=0.146 Sum_probs=38.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
++.+++.+..+++.+|||.|| +++|+|+++.+++.|+.++...|+
T Consensus 160 ~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~ 233 (445)
T 2okc_A 160 IQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI 233 (445)
T ss_dssp HHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 456777888999999999998 289999999999999998765554
No 263
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.58 E-value=0.0002 Score=59.11 Aligned_cols=41 Identities=15% Similarity=0.051 Sum_probs=35.3
Q ss_pred HHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHhc
Q 042963 7 LIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~g 47 (171)
....|+++||++|||+-| .|+++|+|+.-++..++++++.+
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~ 196 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYV 196 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHS
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhh
Confidence 446689999999999985 79999999999999998887654
No 264
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.56 E-value=0.00012 Score=55.70 Aligned_cols=42 Identities=5% Similarity=-0.071 Sum_probs=34.3
Q ss_pred HHHHHcCCCCCCeEEEeCC-------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 6 FLIEKARVSKGHDVLFLRL-------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc-------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
.+++. .+++..+|||||| +|++||.+++..+.|+++.++.|+
T Consensus 22 ~~L~~-~l~~a~~VLEiGtGySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~ 76 (202)
T 3cvo_A 22 EALRM-AYEEAEVILEYGSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPP 76 (202)
T ss_dssp HHHHH-HHHHCSEEEEESCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCC
T ss_pred HHHHH-HhhCCCEEEEECchHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 34433 5567889999995 999999999999999998877653
No 265
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.55 E-value=6e-06 Score=64.09 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=38.1
Q ss_pred hHHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHH
Q 042963 2 RKVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKV 43 (171)
Q Consensus 2 ~k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~ 43 (171)
+.++.+++.++++++++|||||| +|+|||+|++|++.|++++
T Consensus 16 ~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~ 71 (245)
T 1yub_A 16 KVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKL 71 (245)
T ss_dssp TTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTT
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHh
Confidence 45788999999999999999998 8999999999999988765
No 266
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.47 E-value=0.00024 Score=58.41 Aligned_cols=46 Identities=9% Similarity=0.165 Sum_probs=39.3
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhchH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGLQ 49 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl~ 49 (171)
.++.+++.++.+ +.+|||+|| +|+|||+|+++++.|+++++..|+.
T Consensus 202 l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~ 261 (369)
T 3bt7_A 202 MLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHID 261 (369)
T ss_dssp HHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 466777888776 579999998 8999999999999999999877653
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.28 E-value=0.0002 Score=56.32 Aligned_cols=43 Identities=5% Similarity=0.023 Sum_probs=35.0
Q ss_pred HHHHHcCCCCCCeEEEeCC--------------eEEEEcCCH-------HHHHHHHHHHHHhch
Q 042963 6 FLIEKARVSKGHDVLFLRL--------------DYTGITLSE-------EQLKYTEMKVKEAGL 48 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~-------~~~~~A~~~~~~~gl 48 (171)
.+.+.+++.++.+|||+|| +|+|+|+|+ ++++.|+++++..++
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~ 137 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDT 137 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCC
Confidence 3455567778899999997 899999999 889999887765544
No 268
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.24 E-value=0.00022 Score=58.84 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=26.9
Q ss_pred CCCeEEEeCC---------------eEEEEcCCHHHHHHHHHHHH
Q 042963 15 KGHDVLFLRL---------------DYTGITLSEEQLKYTEMKVK 44 (171)
Q Consensus 15 ~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~~~ 44 (171)
.+.+|||||| +|++||+++++++.|+++..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~ 232 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMR 232 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 5789999996 89999999999999998853
No 269
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.09 E-value=0.00056 Score=57.33 Aligned_cols=36 Identities=14% Similarity=0.011 Sum_probs=32.1
Q ss_pred CCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHh--ch
Q 042963 13 VSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEA--GL 48 (171)
Q Consensus 13 l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~--gl 48 (171)
+++|.+|||+|| +|+|||+|+++++.|+++++.. |+
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl 142 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEG 142 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTT
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCC
Confidence 446999999998 8999999999999999999876 54
No 270
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.03 E-value=0.0009 Score=55.75 Aligned_cols=56 Identities=13% Similarity=0.089 Sum_probs=44.8
Q ss_pred CCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHhchH---------------------------
Q 042963 14 SKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEAGLQ--------------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~gl~--------------------------- 49 (171)
++|.+|||++| +|+++|++++.++.++++++..|++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 67999999997 6999999999999999998865531
Q ss_pred --------HHHHHHHhccccCcEEEEEc
Q 042963 50 --------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.+.+.|+|||.+++.+
T Consensus 131 lDP~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDPFGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 24555667788888777654
No 271
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.02 E-value=0.0011 Score=52.86 Aligned_cols=41 Identities=15% Similarity=0.054 Sum_probs=35.7
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHH
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKE 45 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~ 45 (171)
++.+++.+. .+|++|||++| +++|||+++++++.|+++++.
T Consensus 225 ~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 225 AERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHH
Confidence 566777766 79999999998 999999999999999998754
No 272
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.94 E-value=0.0014 Score=52.59 Aligned_cols=56 Identities=16% Similarity=0.351 Sum_probs=46.5
Q ss_pred CCCCeEEEeC----------------CeEEEEcCCHHHHHHHHHHHHHh--c-hH-------------------------
Q 042963 14 SKGHDVLFLR----------------LDYTGITLSEEQLKYTEMKVKEA--G-LQ------------------------- 49 (171)
Q Consensus 14 ~~g~rVLDIG----------------c~VtgId~S~~~~~~A~~~~~~~--g-l~------------------------- 49 (171)
....+||=|| .+|+.|||+++.++.+++..... + ++
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 3457999999 28999999999999999886432 1 11
Q ss_pred -----------------HHHHHHHhccccCcEEEEEc
Q 042963 50 -----------------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----------------~~~~~~~r~LkpgG~l~i~~ 69 (171)
+|++.+++.|+|||.++.+.
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 89999999999999999875
No 273
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.90 E-value=0.00072 Score=55.29 Aligned_cols=37 Identities=3% Similarity=-0.031 Sum_probs=33.7
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHH
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTE 40 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~ 40 (171)
++.+++.|.++||..++|..| +|+|+|.++++++.|+
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 477899999999999999885 8999999999999884
No 274
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.88 E-value=0.0026 Score=50.54 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=28.1
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEE 34 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~ 34 (171)
|+..+.++..++++++|||+|| .|+|+|++.+
T Consensus 62 KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvD 109 (277)
T 3evf_A 62 KLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRD 109 (277)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred HHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEecc
Confidence 8999999988999999999998 5788888843
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.83 E-value=0.0035 Score=55.86 Aligned_cols=45 Identities=11% Similarity=0.180 Sum_probs=39.8
Q ss_pred HHHHHHcCCCCCCeEEEeCC----------------------------------------------------------eE
Q 042963 5 SFLIEKARVSKGHDVLFLRL----------------------------------------------------------DY 26 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc----------------------------------------------------------~V 26 (171)
+.++..++.+++.+|||.+| +|
T Consensus 180 a~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i 259 (703)
T 3v97_A 180 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHF 259 (703)
T ss_dssp HHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_pred HHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccE
Confidence 55778889999999999998 18
Q ss_pred EEEcCCHHHHHHHHHHHHHhchH
Q 042963 27 TGITLSEEQLKYTEMKVKEAGLQ 49 (171)
Q Consensus 27 tgId~S~~~~~~A~~~~~~~gl~ 49 (171)
+|+|+++.+++.|++++..+|+.
T Consensus 260 ~G~Did~~av~~A~~N~~~agv~ 282 (703)
T 3v97_A 260 YGSDSDARVIQRARTNARLAGIG 282 (703)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCG
T ss_pred EEEECCHHHHHHHHHHHHHcCCC
Confidence 99999999999999999888764
No 276
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=96.82 E-value=0.0013 Score=51.69 Aligned_cols=41 Identities=5% Similarity=-0.057 Sum_probs=35.5
Q ss_pred HHHHHHcCCCCC--CeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHH
Q 042963 5 SFLIEKARVSKG--HDVLFLRL--------------DYTGITLSEEQLKYTEMKVKE 45 (171)
Q Consensus 5 ~~ll~~l~l~~g--~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~ 45 (171)
+.+++.+++++| .+|||+|| +||+||+++.+++.+++..+.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~ 132 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLAR 132 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH
Confidence 567788899999 99999996 999999999998888877654
No 277
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=96.52 E-value=0.0042 Score=53.67 Aligned_cols=42 Identities=12% Similarity=0.041 Sum_probs=35.7
Q ss_pred HHHHHHcCCCCCCeEEEeCC----------------------------------eEEEEcCCHHHHHHHHHHHHHh
Q 042963 5 SFLIEKARVSKGHDVLFLRL----------------------------------DYTGITLSEEQLKYTEMKVKEA 46 (171)
Q Consensus 5 ~~ll~~l~l~~g~rVLDIGc----------------------------------~VtgId~S~~~~~~A~~~~~~~ 46 (171)
+.+++.+...++.+|||.+| +++|+|+++.+++.|+.++...
T Consensus 159 ~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~ 234 (541)
T 2ar0_A 159 KTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH 234 (541)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh
Confidence 45677888999999999998 1899999999999999876533
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.19 E-value=0.0064 Score=53.61 Aligned_cols=51 Identities=8% Similarity=0.076 Sum_probs=42.0
Q ss_pred CCCeEEEeCC--------------------eEEEEcCCHHHHHHHHHHHHHhchH-------------------------
Q 042963 15 KGHDVLFLRL--------------------DYTGITLSEEQLKYTEMKVKEAGLQ------------------------- 49 (171)
Q Consensus 15 ~g~rVLDIGc--------------------~VtgId~S~~~~~~A~~~~~~~gl~------------------------- 49 (171)
.+..|||||| +|++||-|+ |...|++..++.++.
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSE 435 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSE 435 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEE
Confidence 4467999996 689999996 788899888887765
Q ss_pred ------------HHHHHHHhccccCcEEE
Q 042963 50 ------------QFFGCCESLLAEHGLLL 66 (171)
Q Consensus 50 ------------~~~~~~~r~LkpgG~l~ 66 (171)
+.+....|.|||||.++
T Consensus 436 wMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 56667789999999875
No 279
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=95.93 E-value=0.011 Score=47.04 Aligned_cols=41 Identities=12% Similarity=0.051 Sum_probs=37.2
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHH
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKE 45 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~ 45 (171)
++.+++.+++++|..+||.+| +|+|+|.++++++.|++ .+.
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~ 65 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL 65 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc
Confidence 578899999999999999997 89999999999999998 544
No 280
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.80 E-value=0.014 Score=46.48 Aligned_cols=21 Identities=5% Similarity=-0.013 Sum_probs=17.2
Q ss_pred HHHHHHHhccccCcEEEEEcc
Q 042963 50 QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++.+...|+|||.+++.++
T Consensus 225 ~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 225 DTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp HHHHHHGGGEEEEEEEEESSC
T ss_pred HHHHHHHhhcCCCEEEEEcCC
Confidence 568888888999998888765
No 281
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.77 E-value=0.015 Score=46.67 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=49.9
Q ss_pred HHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh--------------------ch
Q 042963 6 FLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA--------------------GL 48 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~--------------------gl 48 (171)
..++..++++|++||=+|+ +|+++|.|++-.+.+++.-... |+
T Consensus 154 ~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~ 233 (348)
T 4eez_A 154 KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGV 233 (348)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCE
T ss_pred eeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCc
Confidence 3467789999999999994 9999999999888777542211 11
Q ss_pred H---------HHHHHHHhccccCcEEEEEcc
Q 042963 49 Q---------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 49 ~---------~~~~~~~r~LkpgG~l~i~~i 70 (171)
. ..+....+.|+|+|++++...
T Consensus 234 d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 234 QSAIVCAVARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EEEEECCSCHHHHHHHHHTEEEEEEEEECCC
T ss_pred eEEEEeccCcchhheeheeecCCceEEEEec
Confidence 0 668888899999999987654
No 282
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=95.70 E-value=0.03 Score=48.41 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=34.8
Q ss_pred HHHHHHcC----CCCCCeEEEeCC-------------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 5 SFLIEKAR----VSKGHDVLFLRL-------------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 5 ~~ll~~l~----l~~g~rVLDIGc-------------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
+.+++.+. .+++.+|||.+| +++|+|+++.++..|+.++.-.|+
T Consensus 207 ~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 273 (542)
T 3lkd_A 207 KLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV 273 (542)
T ss_dssp HHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC
Confidence 34445554 568999999998 699999999999999988765544
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=95.67 E-value=0.01 Score=47.19 Aligned_cols=33 Identities=21% Similarity=0.187 Sum_probs=29.9
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQ 35 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~ 35 (171)
|+..+.++-.++++++|||+|| .|+|+|++..+
T Consensus 78 KL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~ 126 (282)
T 3gcz_A 78 KLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQG 126 (282)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCc
Confidence 8999999999999999999998 68999998654
No 284
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=95.60 E-value=0.011 Score=46.21 Aligned_cols=34 Identities=21% Similarity=0.235 Sum_probs=30.6
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQL 36 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~ 36 (171)
|+..+.++-.++++++|||+|| +|.|+|+...-.
T Consensus 66 KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh 115 (267)
T 3p8z_A 66 KLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH 115 (267)
T ss_dssp HHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS
T ss_pred HHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc
Confidence 8999999999999999999998 799999986643
No 285
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=95.56 E-value=0.023 Score=49.11 Aligned_cols=44 Identities=20% Similarity=0.254 Sum_probs=36.5
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-------------------------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-------------------------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-------------------------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
++.+++.+..+++ +|||.+| +++|+|+++.++..|+.++...|+
T Consensus 234 v~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 308 (544)
T 3khk_A 234 VTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI 308 (544)
T ss_dssp HHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC
Confidence 4567777888887 9999998 389999999999999988765554
No 286
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.54 E-value=0.017 Score=47.04 Aligned_cols=64 Identities=11% Similarity=0.102 Sum_probs=49.4
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-------------------chH-
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-------------------GLQ- 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-------------------gl~- 49 (171)
+.+.+++++|++||-+|+ +|+++|.|++..+.+++.-... +++
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 346789999999999994 6999999999999887642110 111
Q ss_pred --------HHHHHHHhccccCcEEEEEcc
Q 042963 50 --------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++...+.|+|||++++...
T Consensus 262 vid~~g~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 262 ALESTGSPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEECSCCHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEeCC
Confidence 568888999999999987544
No 287
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.34 E-value=0.015 Score=46.76 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEE 34 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~ 34 (171)
|+..+.++-.++++++|||+|| .|.|+|+...
T Consensus 82 KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~ 129 (321)
T 3lkz_A 82 KLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGP 129 (321)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCST
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCC
Confidence 8999999999999999999998 7999999987
No 288
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.20 E-value=0.019 Score=46.07 Aligned_cols=65 Identities=12% Similarity=0.162 Sum_probs=50.1
Q ss_pred HHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh------------------chH--
Q 042963 6 FLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA------------------GLQ-- 49 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~------------------gl~-- 49 (171)
..++..++++|++||-+|+ +|+++|.|++..+.+++.-... +..
T Consensus 157 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 157 KGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp HHHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEE
T ss_pred HHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEE
Confidence 3457789999999999994 9999999999999887642110 111
Q ss_pred -------HHHHHHHhccccCcEEEEEcc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++.+.+.|+|||++++...
T Consensus 237 id~~g~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 237 LVTAVSPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EESSCCHHHHHHHHHHEEEEEEEEECSC
T ss_pred EEeCCCHHHHHHHHHHhccCCEEEEeCC
Confidence 678888999999999987543
No 289
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.14 E-value=0.0069 Score=49.82 Aligned_cols=36 Identities=22% Similarity=0.443 Sum_probs=30.6
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHH
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYT 39 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A 39 (171)
++.+++.+...++.+|||+|| +|+|+|+++++++.|
T Consensus 28 ~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a 80 (421)
T 2ih2_A 28 VDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP 80 (421)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC
T ss_pred HHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC
Confidence 456777888777889999998 699999999998776
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.09 E-value=0.028 Score=46.58 Aligned_cols=29 Identities=21% Similarity=0.151 Sum_probs=25.4
Q ss_pred CCCCeEEEeCC---------------eEEEEcCCHHHHHHHHHH
Q 042963 14 SKGHDVLFLRL---------------DYTGITLSEEQLKYTEMK 42 (171)
Q Consensus 14 ~~g~rVLDIGc---------------~VtgId~S~~~~~~A~~~ 42 (171)
.+..+||=||- +|+.|||+++.++.|++.
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~y 247 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKY 247 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhh
Confidence 35689999992 899999999999999986
No 291
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.05 E-value=0.023 Score=45.81 Aligned_cols=65 Identities=9% Similarity=-0.016 Sum_probs=50.7
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh--------------------chH
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA--------------------GLQ 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~--------------------gl~ 49 (171)
.++.+++++|++||=+|+ +|+++|.+++..+.+++.-... |++
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 457889999999999994 7999999999988887652110 111
Q ss_pred ---------HHHHHHHhccccCcEEEEEccc
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
..++.+.+.|+|||++++....
T Consensus 238 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 238 KVVIAGGDVHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp EEEECSSCTTHHHHHHHHEEEEEEEEECCCC
T ss_pred EEEECCCChHHHHHHHHHHhcCCEEEEeccc
Confidence 5688899999999999876543
No 292
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.03 E-value=0.045 Score=40.15 Aligned_cols=61 Identities=20% Similarity=0.111 Sum_probs=44.6
Q ss_pred HHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHH----------------HH----hchH--
Q 042963 9 EKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKV----------------KE----AGLQ-- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~----------------~~----~gl~-- 49 (171)
+.+++++|++||.+|+ +|+++|.+++..+.+++.- .+ .+++
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~v 111 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVV 111 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEE
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEE
Confidence 4578999999999993 8999999998877665320 00 0111
Q ss_pred ------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++.+.+.|+|||++++..
T Consensus 112 i~~~g~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 112 LNSLAGEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EECCCTHHHHHHHHTEEEEEEEEECS
T ss_pred EECCchHHHHHHHHHhccCCEEEEEc
Confidence 66788888999999887643
No 293
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=95.00 E-value=0.021 Score=47.13 Aligned_cols=31 Identities=13% Similarity=-0.025 Sum_probs=25.6
Q ss_pred HHHHHHHHc--------CCCCCCeEEEeCC--------------eEEEEcCCH
Q 042963 3 KVSFLIEKA--------RVSKGHDVLFLRL--------------DYTGITLSE 33 (171)
Q Consensus 3 k~~~ll~~l--------~l~~g~rVLDIGc--------------~VtgId~S~ 33 (171)
|++.++... .+++|++|||+|| +|+|||+.+
T Consensus 191 KL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~ 243 (375)
T 4auk_A 191 KLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP 243 (375)
T ss_dssp HHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC
T ss_pred HHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh
Confidence 777777665 3789999999996 999999874
No 294
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=94.63 E-value=0.06 Score=48.82 Aligned_cols=28 Identities=4% Similarity=-0.123 Sum_probs=24.8
Q ss_pred CCCCCCeEEEeCC-------------------eEEEEcCCHHHHHHH
Q 042963 12 RVSKGHDVLFLRL-------------------DYTGITLSEEQLKYT 39 (171)
Q Consensus 12 ~l~~g~rVLDIGc-------------------~VtgId~S~~~~~~A 39 (171)
..+++.+|||.|| +++|+|+++.+++.|
T Consensus 318 ~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 318 PLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELL 364 (878)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHH
T ss_pred cCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHH
Confidence 3467999999998 489999999999999
No 295
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.56 E-value=0.079 Score=42.78 Aligned_cols=64 Identities=16% Similarity=0.086 Sum_probs=50.2
Q ss_pred HHHHcCCCCCCeEEEeCC----------------e-EEEEcCCHHHHHHHHHHHHH-----------h------------
Q 042963 7 LIEKARVSKGHDVLFLRL----------------D-YTGITLSEEQLKYTEMKVKE-----------A------------ 46 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc----------------~-VtgId~S~~~~~~A~~~~~~-----------~------------ 46 (171)
.++.+++++|++||=+|+ + |+++|.|++..+.+++.+.. .
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp HHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCC
Confidence 357889999999999994 4 99999999999998876211 0
Q ss_pred -chH---------HHHHHHHhccccCcEEEEEcc
Q 042963 47 -GLQ---------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 47 -gl~---------~~~~~~~r~LkpgG~l~i~~i 70 (171)
|++ ..++.+.+.|+|||++++...
T Consensus 251 ~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 251 IEPAVALECTGVESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCC
T ss_pred CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEcc
Confidence 111 468889999999999987654
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=94.44 E-value=0.13 Score=44.14 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=37.5
Q ss_pred HHHHHHHcCCCCCCeEEEeCC-----------------------------eEEEEcCCHHHHHHHHHHHHHhc
Q 042963 4 VSFLIEKARVSKGHDVLFLRL-----------------------------DYTGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc-----------------------------~VtgId~S~~~~~~A~~~~~~~g 47 (171)
++.+++.+..++|++|+|-.| .++|+|+.+.+...|+-+.--.|
T Consensus 206 v~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg 278 (530)
T 3ufb_A 206 VRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG 278 (530)
T ss_dssp HHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC
Confidence 466778889999999999998 48999999999999997765444
No 297
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.37 E-value=0.03 Score=44.91 Aligned_cols=65 Identities=11% Similarity=-0.078 Sum_probs=47.5
Q ss_pred HHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh--------------------ch
Q 042963 6 FLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA--------------------GL 48 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~--------------------gl 48 (171)
.+.+.+++++|++||-+|+ +|+++|.+++..+.+++.-... ++
T Consensus 135 ~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 135 TCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred HHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCC
Confidence 3457789999999999994 8999999999888887642110 11
Q ss_pred H--------HHHHHHHhccccCcEEEEEcc
Q 042963 49 Q--------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 49 ~--------~~~~~~~r~LkpgG~l~i~~i 70 (171)
+ .......+.|+|||++++...
T Consensus 215 Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 215 DAAIDSIGGPDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEEESSCHHHHHHHHHTEEEEEEEEECCC
T ss_pred cEEEECCCChhHHHHHHHhcCCCEEEEEee
Confidence 1 334455689999999987543
No 298
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.88 E-value=0.028 Score=45.27 Aligned_cols=65 Identities=17% Similarity=0.033 Sum_probs=50.7
Q ss_pred HHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHHh----------chH---------H
Q 042963 6 FLIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKEA----------GLQ---------Q 50 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~~----------gl~---------~ 50 (171)
..++++++++|++||-+|+ +|+++|.|++..+.+++.-... +++ .
T Consensus 167 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~ 246 (348)
T 3two_A 167 SPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY 246 (348)
T ss_dssp HHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC
T ss_pred HHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH
Confidence 3456779999999999994 9999999999999887642211 222 3
Q ss_pred HHHHHHhccccCcEEEEEcc
Q 042963 51 FFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 51 ~~~~~~r~LkpgG~l~i~~i 70 (171)
.++...+.|+|||++++...
T Consensus 247 ~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 247 DLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp CHHHHHTTEEEEEEEEECCC
T ss_pred HHHHHHHHHhcCCEEEEECC
Confidence 78889999999999987543
No 299
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.81 E-value=0.15 Score=40.74 Aligned_cols=64 Identities=11% Similarity=0.208 Sum_probs=48.9
Q ss_pred HHHHc--CCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH-------------------hch
Q 042963 7 LIEKA--RVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE-------------------AGL 48 (171)
Q Consensus 7 ll~~l--~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~-------------------~gl 48 (171)
.+..+ ++++|++||=+|+ +|+++|.|++..+.+++.-.. .++
T Consensus 161 ~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 161 AISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGA 240 (345)
T ss_dssp HHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCE
T ss_pred HHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCC
Confidence 34443 7999999999984 899999999999988764110 022
Q ss_pred H---------HHHHHHHhccccCcEEEEEcc
Q 042963 49 Q---------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 49 ~---------~~~~~~~r~LkpgG~l~i~~i 70 (171)
+ ..++.+.+.|+|||++++...
T Consensus 241 d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 241 TAVFDFVGAQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp EEEEESSCCHHHHHHHHHHEEEEEEEEECSC
T ss_pred eEEEECCCCHHHHHHHHHHHhcCCEEEEECC
Confidence 1 488999999999999987654
No 300
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.79 E-value=0.053 Score=43.17 Aligned_cols=64 Identities=17% Similarity=0.090 Sum_probs=48.1
Q ss_pred HHHHcCCCCCCeEEEeC-----------------CeEEEEcCCHHHHHHHHHHHHHh--------------------chH
Q 042963 7 LIEKARVSKGHDVLFLR-----------------LDYTGITLSEEQLKYTEMKVKEA--------------------GLQ 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~~~~~~--------------------gl~ 49 (171)
+.+.+++++|++||=+| ++|++++.+++..+.+++.-... +++
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCce
Confidence 34557899999999999 29999999999998887642110 111
Q ss_pred --------HHHHHHHhccccCcEEEEEcc
Q 042963 50 --------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++.+.+.|+|||++++...
T Consensus 212 vvid~~g~~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 212 VVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEESSCGGGHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCChHHHHHHHHHhcCCCEEEEEec
Confidence 457788899999999987543
No 301
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.71 E-value=0.18 Score=40.63 Aligned_cols=63 Identities=17% Similarity=0.064 Sum_probs=48.3
Q ss_pred HHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH-------------------H---hch
Q 042963 8 IEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVK-------------------E---AGL 48 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~-------------------~---~gl 48 (171)
++.+++++|++||-+|+ +|+++|.|++..+.+++.-. + .++
T Consensus 164 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~ 243 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKP 243 (356)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCC
Confidence 46789999999999993 89999999998888764211 0 122
Q ss_pred H---------HHHHHHHhccccCcEEEEEcc
Q 042963 49 Q---------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 49 ~---------~~~~~~~r~LkpgG~l~i~~i 70 (171)
+ ..++...+.|+|||++++...
T Consensus 244 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 244 EVTIECTGAEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SEEEECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred CEEEECCCChHHHHHHHHHhcCCCEEEEEec
Confidence 2 467888999999999987554
No 302
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.55 E-value=0.14 Score=40.79 Aligned_cols=67 Identities=18% Similarity=0.092 Sum_probs=50.8
Q ss_pred HHHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh--------------------ch
Q 042963 6 FLIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA--------------------GL 48 (171)
Q Consensus 6 ~ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~--------------------gl 48 (171)
.+....++++|++||=+|+ .++++|.+++-.+.|++.-... +.
T Consensus 151 ~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp HHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSS
T ss_pred HHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCc
Confidence 4567789999999999995 5789999999988887642110 00
Q ss_pred H---------HHHHHHHhccccCcEEEEEcccC
Q 042963 49 Q---------QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 49 ~---------~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
. ..++...+.|+|||++++.....
T Consensus 231 d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 231 QLILETAGVPQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp EEEEECSCSHHHHHHHHHHCCTTCEEEECCCCS
T ss_pred ccccccccccchhhhhhheecCCeEEEEEeccC
Confidence 0 67888899999999998765443
No 303
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.54 E-value=0.046 Score=44.52 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=47.7
Q ss_pred HHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH---------------hchH------
Q 042963 7 LIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE---------------AGLQ------ 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~---------------~gl~------ 49 (171)
.+.++++++|++||-+|+ +|+++|.|++..+.+++.-.. .+++
T Consensus 186 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~ 265 (369)
T 1uuf_A 186 PLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTV 265 (369)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECC
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECC
Confidence 455679999999999994 899999999999888764211 0111
Q ss_pred ---HHHHHHHhccccCcEEEEEc
Q 042963 50 ---QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ---~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++...+.|+|||++++..
T Consensus 266 g~~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 266 AAPHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp SSCCCHHHHHTTEEEEEEEEECC
T ss_pred CCHHHHHHHHHHhccCCEEEEec
Confidence 35778889999999988654
No 304
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=93.52 E-value=0.2 Score=41.34 Aligned_cols=28 Identities=14% Similarity=0.233 Sum_probs=23.6
Q ss_pred chHHHHHHHHhccccCcEEEEEcccCCC
Q 042963 47 GLQQFFGCCESLLAEHGLLLLQFSSVPD 74 (171)
Q Consensus 47 gl~~~~~~~~r~LkpgG~l~i~~i~~~~ 74 (171)
.+..+++..++.|+|||++++...+...
T Consensus 203 D~~~fL~~ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 203 DLAEFLRARAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 4558999999999999999998776643
No 305
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.45 E-value=0.061 Score=42.89 Aligned_cols=62 Identities=15% Similarity=0.202 Sum_probs=47.1
Q ss_pred HHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHH-HHHHHH-------------------hchH-
Q 042963 8 IEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYT-EMKVKE-------------------AGLQ- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A-~~~~~~-------------------~gl~- 49 (171)
.+.+++++|++||-+|+ +|++++.+++..+.+ ++.-.. .+++
T Consensus 142 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (336)
T 4b7c_A 142 LDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDV 221 (336)
T ss_dssp HHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred HHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceE
Confidence 37789999999999994 899999999988887 332100 0111
Q ss_pred -------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++.+.+.|+|||++++..
T Consensus 222 vi~~~g~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 222 FFDNVGGEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEESSCHHHHHHHHTTEEEEEEEEECC
T ss_pred EEECCCcchHHHHHHHHhhCCEEEEEe
Confidence 56788889999999998754
No 306
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.44 E-value=0.11 Score=41.97 Aligned_cols=63 Identities=17% Similarity=0.114 Sum_probs=48.3
Q ss_pred HHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH-------h-------------chH---
Q 042963 9 EKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE-------A-------------GLQ--- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~-------~-------------gl~--- 49 (171)
+.+++++|++||=+|+ +|+++|.+++..+.+++.-.. . +++
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vi 262 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHIL 262 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEE
Confidence 6788999999999994 999999999999888764211 0 111
Q ss_pred -----HHHHHHHhccccCcEEEEEccc
Q 042963 50 -----QFFGCCESLLAEHGLLLLQFSS 71 (171)
Q Consensus 50 -----~~~~~~~r~LkpgG~l~i~~i~ 71 (171)
..++.+.+.|+|||++++....
T Consensus 263 d~~g~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 263 EIAGGAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EETTSSCHHHHHHHEEEEEEEEEECCC
T ss_pred ECCChHHHHHHHHHhhcCCEEEEEecC
Confidence 4467788999999999876543
No 307
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.94 E-value=0.066 Score=42.71 Aligned_cols=62 Identities=23% Similarity=0.278 Sum_probs=46.8
Q ss_pred HHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh--------------------chH--
Q 042963 9 EKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA--------------------GLQ-- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~--------------------gl~-- 49 (171)
+..++++|++||=+|+ +|++++.+++..+.+++.-... +++
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~v 221 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDAS 221 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEE
Confidence 4468999999999993 8999999999988877642110 111
Q ss_pred ------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++.+.+.|+|||++++...
T Consensus 222 id~~g~~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 222 FDSVGKDTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EECCGGGGHHHHHHHEEEEEEEEECCC
T ss_pred EECCChHHHHHHHHHhccCCEEEEEcC
Confidence 457788899999999987543
No 308
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.86 E-value=0.12 Score=41.28 Aligned_cols=64 Identities=13% Similarity=0.195 Sum_probs=48.0
Q ss_pred HHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH------------------hchH---
Q 042963 7 LIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE------------------AGLQ--- 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~------------------~gl~--- 49 (171)
.++++++++|++||-+|+ +|++++.|++..+.+++.-.. .+++
T Consensus 156 ~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vi 235 (339)
T 1rjw_A 156 ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAV 235 (339)
T ss_dssp HHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEE
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEE
Confidence 455668999999999994 899999999988887652100 1121
Q ss_pred ------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++...+.|+|||++++...
T Consensus 236 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 236 VTAVSKPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp ESSCCHHHHHHHHHHEEEEEEEEECCC
T ss_pred ECCCCHHHHHHHHHHhhcCCEEEEecc
Confidence 567888899999999986543
No 309
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.85 E-value=0.15 Score=41.45 Aligned_cols=64 Identities=13% Similarity=0.066 Sum_probs=49.9
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH---------------h-------c
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE---------------A-------G 47 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~---------------~-------g 47 (171)
.++.+++++|++||=+|+ +|+++|.+++..+.+++.-.. . |
T Consensus 174 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTC
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCC
Confidence 347889999999999993 899999999999988864110 0 1
Q ss_pred hH---------HHHHHHHhccccCcEEEEEcc
Q 042963 48 LQ---------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 48 l~---------~~~~~~~r~LkpgG~l~i~~i 70 (171)
++ ..++.+.+.|+|||++++...
T Consensus 254 ~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 254 VDVVIECAGVAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp EEEEEECSCCHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCEEEEEec
Confidence 22 578888999999999987543
No 310
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.66 E-value=0.082 Score=42.64 Aligned_cols=63 Identities=19% Similarity=0.186 Sum_probs=47.3
Q ss_pred HHHcCCCCCCeEEEeC-----------------CeEEEEcCCHHHHHHHHHHHHHh-------------------chH--
Q 042963 8 IEKARVSKGHDVLFLR-----------------LDYTGITLSEEQLKYTEMKVKEA-------------------GLQ-- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~~~~~~-------------------gl~-- 49 (171)
.+.+++++|++||=+| ++|+++|.+++..+.+++.-... +++
T Consensus 160 ~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvv 239 (353)
T 4dup_A 160 FQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDII 239 (353)
T ss_dssp TTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEE
T ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEE
Confidence 3668899999999995 39999999999998887642110 111
Q ss_pred ------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++...+.|+|||++++...
T Consensus 240 id~~g~~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 240 LDMIGAAYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EESCCGGGHHHHHHTEEEEEEEEECCC
T ss_pred EECCCHHHHHHHHHHhccCCEEEEEEe
Confidence 456778889999999887543
No 311
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.65 E-value=0.16 Score=41.08 Aligned_cols=64 Identities=13% Similarity=0.181 Sum_probs=48.6
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH-------H--h------------ch
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVK-------E--A------------GL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~-------~--~------------gl 48 (171)
+.+.+++++|++||-+|+ +|+++|.|++..+.+++.-. . . ++
T Consensus 184 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCC
Confidence 446789999999999993 79999999998888875311 0 0 12
Q ss_pred H---------HHHHHHHhccccC-cEEEEEcc
Q 042963 49 Q---------QFFGCCESLLAEH-GLLLLQFS 70 (171)
Q Consensus 49 ~---------~~~~~~~r~Lkpg-G~l~i~~i 70 (171)
+ ..++.+.+.|+|| |++++...
T Consensus 264 D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 264 DFSLECVGNVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp SEEEECSCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCcEEEEEcC
Confidence 1 5678889999999 99987543
No 312
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=92.62 E-value=0.24 Score=41.00 Aligned_cols=67 Identities=16% Similarity=0.272 Sum_probs=43.0
Q ss_pred chHHHHHHHHhccccCcEEEEEcccCCCc--c------cccc-c-------CccchhhhcccCCCcCCCHHHHHHHHHhc
Q 042963 47 GLQQFFGCCESLLAEHGLLLLQFSSVPDQ--C------YDEH-R-------LSPGFMKEYVFPGGCLPSLNRITSTMTSS 110 (171)
Q Consensus 47 gl~~~~~~~~r~LkpgG~l~i~~i~~~~~--~------~~~~-~-------~~~~~~~~~ifp~~~lp~~~~l~~~~~~~ 110 (171)
.+..|++..++.|+|||++++...+.... . .... . ...+-+..+-.| -+.|+++|+...+++.
T Consensus 203 D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P-~y~ps~~E~~~~le~~ 281 (384)
T 2efj_A 203 DFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVP-IYAPSTEEVKRIVEEE 281 (384)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCS-BCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCc-ccCCCHHHHHHHHHHc
Confidence 35588999999999999999988776543 1 0000 0 000111122234 2679999999999998
Q ss_pred CCcc
Q 042963 111 SRLC 114 (171)
Q Consensus 111 g~~~ 114 (171)
|.+.
T Consensus 282 g~F~ 285 (384)
T 2efj_A 282 GSFE 285 (384)
T ss_dssp CSEE
T ss_pred CCce
Confidence 7543
No 313
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.54 E-value=0.55 Score=37.56 Aligned_cols=63 Identities=17% Similarity=0.050 Sum_probs=48.3
Q ss_pred HHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHH-----------------HH-------hc
Q 042963 8 IEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKV-----------------KE-------AG 47 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~-----------------~~-------~g 47 (171)
++.+++++|++||-+|+ +|+++|.|++..+.+++.- .+ .+
T Consensus 161 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 161 CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCC
Confidence 46789999999999994 8999999999888876421 00 12
Q ss_pred hH---------HHHHHHHhccccCcEEEEEcc
Q 042963 48 LQ---------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 48 l~---------~~~~~~~r~LkpgG~l~i~~i 70 (171)
++ ..++...+.|+|||++++...
T Consensus 241 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 241 PNVTIDCSGNEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp CSEEEECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEec
Confidence 33 467888999999999987543
No 314
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.51 E-value=0.22 Score=40.30 Aligned_cols=64 Identities=9% Similarity=0.182 Sum_probs=48.9
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH---------h------------ch
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE---------A------------GL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~---------~------------gl 48 (171)
+.+.+++++|++||-+|+ +|+++|.|++..+.+++.-.. . ++
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCC
Confidence 446789999999999993 799999999998888754110 0 12
Q ss_pred H---------HHHHHHHhccccC-cEEEEEcc
Q 042963 49 Q---------QFFGCCESLLAEH-GLLLLQFS 70 (171)
Q Consensus 49 ~---------~~~~~~~r~Lkpg-G~l~i~~i 70 (171)
+ ..++.+.+.|+|+ |++++...
T Consensus 262 D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 262 DYSFECIGNVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp SEEEECSCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CEEEECCCcHHHHHHHHHhhccCCcEEEEEec
Confidence 1 5678889999999 99987543
No 315
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.36 E-value=0.14 Score=40.64 Aligned_cols=62 Identities=21% Similarity=0.275 Sum_probs=45.8
Q ss_pred HHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH-------H-h------------chH-
Q 042963 8 IEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVK-------E-A------------GLQ- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~-------~-~------------gl~- 49 (171)
.+.+++++|++||-.|+ +|+++|.+++..+.+++.-. . . +++
T Consensus 138 ~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~ 217 (333)
T 1v3u_A 138 LEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDC 217 (333)
T ss_dssp HTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEE
T ss_pred HHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeE
Confidence 36678999999999994 89999999988887744210 0 0 111
Q ss_pred -------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++...+.|+|||++++..
T Consensus 218 vi~~~g~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 218 YFDNVGGEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEESSCHHHHHHHHTTEEEEEEEEECC
T ss_pred EEECCChHHHHHHHHHHhcCCEEEEEe
Confidence 55777889999999987644
No 316
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.35 E-value=0.19 Score=40.71 Aligned_cols=64 Identities=17% Similarity=0.176 Sum_probs=48.8
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH-------H--h------------ch
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVK-------E--A------------GL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~-------~--~------------gl 48 (171)
+.+.+++++|++||=+|+ +|+++|.|++..+.+++.-. + . ++
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCc
Confidence 446789999999999994 79999999998888875311 0 0 12
Q ss_pred H---------HHHHHHHhccccC-cEEEEEcc
Q 042963 49 Q---------QFFGCCESLLAEH-GLLLLQFS 70 (171)
Q Consensus 49 ~---------~~~~~~~r~Lkpg-G~l~i~~i 70 (171)
+ ..++.+.+.|+|| |++++...
T Consensus 267 Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 267 DYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SEEEESSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred cEEEECCCCHHHHHHHHHHhhcCCCEEEEECC
Confidence 1 5678889999999 99987554
No 317
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.31 E-value=0.14 Score=41.62 Aligned_cols=65 Identities=14% Similarity=0.201 Sum_probs=49.9
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH---------h------------ch
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE---------A------------GL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~---------~------------gl 48 (171)
+.+.+++++|++||=+|+ +|+++|.|++..+.|++.-.. . ++
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 457789999999999994 799999999999888764110 0 11
Q ss_pred H---------HHHHHHHhccccC-cEEEEEccc
Q 042963 49 Q---------QFFGCCESLLAEH-GLLLLQFSS 71 (171)
Q Consensus 49 ~---------~~~~~~~r~Lkpg-G~l~i~~i~ 71 (171)
+ ..++.+.+.|+|| |++++....
T Consensus 265 D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 265 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp SEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CEEEECCCCHHHHHHHHHHhhccCCEEEEEccc
Confidence 1 5788899999997 999876543
No 318
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.27 E-value=0.14 Score=41.94 Aligned_cols=63 Identities=11% Similarity=-0.008 Sum_probs=47.7
Q ss_pred HHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH----------------H----hchH-
Q 042963 8 IEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVK----------------E----AGLQ- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~----------------~----~gl~- 49 (171)
++++++++|++||-+|+ +|+++|.|++.++.+++.-. + .|++
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dv 257 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDC 257 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred HHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCE
Confidence 45789999999999994 69999999999888875310 0 0121
Q ss_pred -------H----------------HHHHHHhccccCcEEEEEcc
Q 042963 50 -------Q----------------FFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 -------~----------------~~~~~~r~LkpgG~l~i~~i 70 (171)
. .++...+.|++||++++...
T Consensus 258 vid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 258 AVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred EEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 2 67888999999999987544
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.19 E-value=0.21 Score=40.48 Aligned_cols=64 Identities=11% Similarity=0.106 Sum_probs=48.7
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH-------H--h------------ch
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVK-------E--A------------GL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~-------~--~------------gl 48 (171)
+.+.+++++|++||=+|+ +|+++|.|++..+.+++.-. . . ++
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 446789999999999994 79999999998888875311 0 0 12
Q ss_pred H---------HHHHHHHhccccC-cEEEEEcc
Q 042963 49 Q---------QFFGCCESLLAEH-GLLLLQFS 70 (171)
Q Consensus 49 ~---------~~~~~~~r~Lkpg-G~l~i~~i 70 (171)
+ ..++...+.|+|| |++++...
T Consensus 263 Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 263 DYAVECAGRIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp SEEEECSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CEEEECCCCHHHHHHHHHHHhcCCCEEEEEcc
Confidence 1 5678889999999 99987543
No 320
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=92.06 E-value=0.29 Score=40.11 Aligned_cols=64 Identities=13% Similarity=0.256 Sum_probs=39.9
Q ss_pred HHHHHHHhccccCcEEEEEcccCCCcc---------cccccC-----------ccchhhhcccCCCcCCCHHHHHHHHHh
Q 042963 50 QFFGCCESLLAEHGLLLLQFSSVPDQC---------YDEHRL-----------SPGFMKEYVFPGGCLPSLNRITSTMTS 109 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~~i~~~~~~---------~~~~~~-----------~~~~~~~~ifp~~~lp~~~~l~~~~~~ 109 (171)
.|++..++.|+|||++++...+..... +..... ..+-+..+-.| -+.|+++|+...+++
T Consensus 190 ~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P-~y~ps~~E~~~~ie~ 268 (359)
T 1m6e_X 190 LFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIP-QYTPSPTEVEAEILK 268 (359)
T ss_dssp HHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCC-CBCCCSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCC-ccCCCHHHHHHHHHH
Confidence 347788999999999999877665421 100000 00011122334 368999999999999
Q ss_pred cCCcc
Q 042963 110 SSRLC 114 (171)
Q Consensus 110 ~g~~~ 114 (171)
.|.+.
T Consensus 269 ~G~F~ 273 (359)
T 1m6e_X 269 EGSFL 273 (359)
T ss_dssp TTTBC
T ss_pred cCCce
Confidence 87643
No 321
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=91.97 E-value=0.18 Score=40.35 Aligned_cols=32 Identities=31% Similarity=0.322 Sum_probs=27.1
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC----------------eEEEEcCCHH
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL----------------DYTGITLSEE 34 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~ 34 (171)
|+..+.++--+++|++|||+|| .|+|+|++..
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~ 116 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIE 116 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccc
Confidence 8888999844689999999997 6899999854
No 322
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=91.94 E-value=0.073 Score=41.52 Aligned_cols=12 Identities=8% Similarity=-0.352 Sum_probs=9.3
Q ss_pred CCCCCeEEEeCC
Q 042963 13 VSKGHDVLFLRL 24 (171)
Q Consensus 13 l~~g~rVLDIGc 24 (171)
.+++.+|||||+
T Consensus 58 ~~~~~~ILEiGf 69 (257)
T 2qy6_A 58 PHPLFVVAESGF 69 (257)
T ss_dssp SSSEEEEEESCC
T ss_pred CCCCCEEEEECC
Confidence 456689999993
No 323
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.83 E-value=0.17 Score=40.73 Aligned_cols=61 Identities=23% Similarity=0.171 Sum_probs=45.8
Q ss_pred HHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH--------------------hchH--
Q 042963 9 EKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE--------------------AGLQ-- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~--------------------~gl~-- 49 (171)
+.+++++|++||-+|+ +|++++.+++..+.+++.-.. .+++
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~v 243 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDII 243 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEE
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEE
Confidence 4678999999999994 899999999988877643110 0111
Q ss_pred ------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..+....+.|+|||++++..
T Consensus 244 i~~~G~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 244 IEMLANVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EESCHHHHHHHHHHHEEEEEEEEECC
T ss_pred EECCChHHHHHHHHhccCCCEEEEEe
Confidence 45677889999999998754
No 324
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.72 E-value=0.14 Score=41.10 Aligned_cols=64 Identities=17% Similarity=0.110 Sum_probs=47.0
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH--------h------------chH
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE--------A------------GLQ 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~--------~------------gl~ 49 (171)
.++++++++|++||-+|+ +|++++.+++..+.+++.-.. . +++
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCC
Confidence 456678999999999994 899999998887776642100 0 111
Q ss_pred ---------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++.+.+.|++||++++...
T Consensus 241 ~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 241 GVINVSVSEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEECSSCHHHHHHHTTSEEEEEEEEECCC
T ss_pred EEEECCCcHHHHHHHHHHHhcCCEEEEEeC
Confidence 567888899999999986543
No 325
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.52 E-value=0.25 Score=39.97 Aligned_cols=64 Identities=14% Similarity=0.237 Sum_probs=48.4
Q ss_pred HHHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH-------H--h------------ch
Q 042963 7 LIEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVK-------E--A------------GL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~-------~--~------------gl 48 (171)
+.+.+++++|++||-+|+ +|+++|.|++..+.+++.-. + . ++
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCC
Confidence 346688999999999993 79999999998888865311 0 0 12
Q ss_pred H---------HHHHHHHhccccC-cEEEEEcc
Q 042963 49 Q---------QFFGCCESLLAEH-GLLLLQFS 70 (171)
Q Consensus 49 ~---------~~~~~~~r~Lkpg-G~l~i~~i 70 (171)
+ ..++...+.|+|| |++++...
T Consensus 263 D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 263 DFSFEVIGRLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp SEEEECSCCHHHHHHHHHHBCTTTCEEEECSC
T ss_pred cEEEECCCCHHHHHHHHHHhhcCCcEEEEecc
Confidence 1 5678889999999 99987543
No 326
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.51 E-value=0.13 Score=41.49 Aligned_cols=61 Identities=21% Similarity=0.114 Sum_probs=45.3
Q ss_pred HHcCCCCCCeEEEeC-----------------CeEEEEcCCHHHHHHHHHHHHHh--------------------chH--
Q 042963 9 EKARVSKGHDVLFLR-----------------LDYTGITLSEEQLKYTEMKVKEA--------------------GLQ-- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~~~~~~--------------------gl~-- 49 (171)
+.+++++|++||-+| |+|++++.+++..+.+++.-... +++
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 235 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLI 235 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEE
Confidence 567899999999999 38999999999888875431100 111
Q ss_pred ------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++...+.|+|||++++..
T Consensus 236 i~~~G~~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 236 LDCIGGSYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EESSCGGGHHHHHHHEEEEEEEEECC
T ss_pred EECCCchHHHHHHHhccCCCEEEEEe
Confidence 45667788899999988654
No 327
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.39 E-value=0.19 Score=40.21 Aligned_cols=62 Identities=11% Similarity=0.035 Sum_probs=47.0
Q ss_pred HHHcCCCCCCeEEEeC----------------C-eEEEEcCCHHHHHHHHHHHHH--------------------hchH-
Q 042963 8 IEKARVSKGHDVLFLR----------------L-DYTGITLSEEQLKYTEMKVKE--------------------AGLQ- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIG----------------c-~VtgId~S~~~~~~A~~~~~~--------------------~gl~- 49 (171)
++++++ +|++||-+| + +|+++|.+++..+.+++.-.. .+++
T Consensus 161 l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 161 VLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp HTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred HHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCE
Confidence 366788 999999999 4 899999999988888753110 0111
Q ss_pred --------HHHHHHHhccccCcEEEEEcc
Q 042963 50 --------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 --------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++.+.+.|+|||+++....
T Consensus 240 vid~~g~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 240 FLEFSGAPKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEECSCCHHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEcc
Confidence 567888999999999987543
No 328
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.37 E-value=0.18 Score=40.00 Aligned_cols=61 Identities=10% Similarity=0.064 Sum_probs=45.5
Q ss_pred HHcCCCCCCeEEEeC-----------------CeEEEEcCCHHHHHHHHHHHHHh--------------------chH--
Q 042963 9 EKARVSKGHDVLFLR-----------------LDYTGITLSEEQLKYTEMKVKEA--------------------GLQ-- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~~~~~~--------------------gl~-- 49 (171)
+.+++++|++||-+| ++|++++.+++..+.+++.-... +++
T Consensus 134 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 134 KTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred HhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEE
Confidence 367899999999999 28999999998888876531100 111
Q ss_pred ------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++.+.+.|++||++++..
T Consensus 214 i~~~g~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 214 YDSVGRDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EECSCGGGHHHHHHTEEEEEEEEECC
T ss_pred EECCchHHHHHHHHHhcCCCEEEEEe
Confidence 55778888999999987654
No 329
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.30 E-value=0.29 Score=39.23 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=46.8
Q ss_pred HHHHcCCC------CCCeEEEeC-----------------CeEEEEcCCHHHHHHHHHHHHH---------------h--
Q 042963 7 LIEKARVS------KGHDVLFLR-----------------LDYTGITLSEEQLKYTEMKVKE---------------A-- 46 (171)
Q Consensus 7 ll~~l~l~------~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~~~~~---------------~-- 46 (171)
+.+.++++ +|++||=+| |+|++++.+++..+.+++.-.. .
T Consensus 136 l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~ 215 (346)
T 3fbg_A 136 LFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGI 215 (346)
T ss_dssp HHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTC
T ss_pred HHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCC
Confidence 34667888 999999995 3999999999998888764211 0
Q ss_pred -chH---------HHHHHHHhccccCcEEEEE
Q 042963 47 -GLQ---------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 47 -gl~---------~~~~~~~r~LkpgG~l~i~ 68 (171)
+++ ..++.+.+.|+|||+++..
T Consensus 216 ~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 216 ELVDYVFCTFNTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHEEEEEEEEES
T ss_pred CCccEEEECCCchHHHHHHHHHhccCCEEEEE
Confidence 111 5678888999999999753
No 330
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.21 E-value=0.33 Score=38.64 Aligned_cols=61 Identities=20% Similarity=0.227 Sum_probs=46.3
Q ss_pred HHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHH--------HH-------------hchH-
Q 042963 9 EKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKV--------KE-------------AGLQ- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~--------~~-------------~gl~- 49 (171)
+.+++++|++||-+|+ +|++++.+++..+.+++.. .. .+++
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcE
Confidence 5678999999999994 8999999999888876311 00 0111
Q ss_pred -------HHHHHHHhccccCcEEEEEc
Q 042963 50 -------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++...+.|+|||++++..
T Consensus 229 vi~~~g~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 229 YFENVGGKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEESSCHHHHHHHHTTEEEEEEEEECC
T ss_pred EEECCCHHHHHHHHHHHhcCCEEEEEc
Confidence 56778889999999998754
No 331
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=91.19 E-value=0.098 Score=37.74 Aligned_cols=26 Identities=12% Similarity=0.022 Sum_probs=21.9
Q ss_pred CCCCCCeEEEeCC----------------eEEEEcCCHHHHH
Q 042963 12 RVSKGHDVLFLRL----------------DYTGITLSEEQLK 37 (171)
Q Consensus 12 ~l~~g~rVLDIGc----------------~VtgId~S~~~~~ 37 (171)
+.+++.+|||||| +|+++|+++..++
T Consensus 32 ~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 32 CSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp HSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred cCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 3567789999997 6999999988766
No 332
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=91.11 E-value=0.3 Score=43.60 Aligned_cols=19 Identities=0% Similarity=-0.148 Sum_probs=14.2
Q ss_pred eEEEEcCCHHHHHHHHHHH
Q 042963 25 DYTGITLSEEQLKYTEMKV 43 (171)
Q Consensus 25 ~VtgId~S~~~~~~A~~~~ 43 (171)
+|++||.|+..+...+.+.
T Consensus 448 kVyAVEknp~A~~~l~~~~ 466 (745)
T 3ua3_A 448 KLYIVEKNPNAIVTLKYMN 466 (745)
T ss_dssp EEEEEECCHHHHHHHHHHH
T ss_pred EEEEEeCChHHHHHHHHHH
Confidence 7999999987665555544
No 333
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.03 E-value=0.25 Score=39.93 Aligned_cols=62 Identities=23% Similarity=0.274 Sum_probs=46.6
Q ss_pred HHHcCCCCCCeEEEeC-----------------CeEEEEcCCHHHHHHHHHHHHH-------------------hchH--
Q 042963 8 IEKARVSKGHDVLFLR-----------------LDYTGITLSEEQLKYTEMKVKE-------------------AGLQ-- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~~~~~-------------------~gl~-- 49 (171)
.+..++++|++||-+| ++|++++.+++..+.+++.-.. .+++
T Consensus 156 ~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 156 KELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp HHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred HHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEE
Confidence 3557899999999999 2899999999888887653110 0111
Q ss_pred ------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++.+.+.|+|+|++++..
T Consensus 236 id~~g~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 236 YESVGGAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EECSCTHHHHHHHHHEEEEEEEEECC
T ss_pred EECCCHHHHHHHHHHHhcCCEEEEEe
Confidence 56788889999999988654
No 334
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.90 E-value=0.22 Score=39.87 Aligned_cols=61 Identities=16% Similarity=0.231 Sum_probs=46.3
Q ss_pred HHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH------------------hchH---
Q 042963 8 IEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE------------------AGLQ--- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~------------------~gl~--- 49 (171)
.+.+++++|++||=+|+ +|+++ .+++..+.+++.-.. .+++
T Consensus 143 ~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vi 221 (343)
T 3gaz_A 143 VDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVY 221 (343)
T ss_dssp TTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEE
T ss_pred HHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEE
Confidence 37789999999999993 89998 888888887754110 1222
Q ss_pred -----HHHHHHHhccccCcEEEEEc
Q 042963 50 -----QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++...+.|+|+|++++..
T Consensus 222 d~~g~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 222 DTLGGPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp ESSCTHHHHHHHHHEEEEEEEEESC
T ss_pred ECCCcHHHHHHHHHHhcCCeEEEEc
Confidence 67788889999999998643
No 335
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=90.85 E-value=0.16 Score=40.76 Aligned_cols=61 Identities=18% Similarity=0.248 Sum_probs=46.1
Q ss_pred HHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-------------------chH---
Q 042963 9 EKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-------------------GLQ--- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-------------------gl~--- 49 (171)
+.+++++|++||=+|+ +|++++.+++..+.+++.-... +++
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvi 232 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVV 232 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEE
Confidence 6788999999999994 8999999999888887642110 121
Q ss_pred -----HHHHHHHhccccCcEEEEEc
Q 042963 50 -----QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++.+.+.|+|||++++..
T Consensus 233 d~~g~~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 233 DPIGGPAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ESCC--CHHHHHHTEEEEEEEEEC-
T ss_pred ECCchhHHHHHHHhhcCCCEEEEEE
Confidence 55778889999999998754
No 336
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.84 E-value=0.32 Score=39.53 Aligned_cols=63 Identities=17% Similarity=0.090 Sum_probs=47.9
Q ss_pred HHHcC-CCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH----------H-------------h
Q 042963 8 IEKAR-VSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVK----------E-------------A 46 (171)
Q Consensus 8 l~~l~-l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~----------~-------------~ 46 (171)
++.++ +++|++||-+|+ +|++++.|++..+.+++.-. . .
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 187 FDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp HHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred HHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCC
Confidence 46678 999999999993 89999999999888774310 0 0
Q ss_pred chH---------HHHHHHHhccccCcEEEEEcc
Q 042963 47 GLQ---------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 47 gl~---------~~~~~~~r~LkpgG~l~i~~i 70 (171)
+++ ..++...+.|+|||++++...
T Consensus 267 g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 267 GADFILEATGDSRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp CEEEEEECSSCTTHHHHHHHHEEEEEEEEECCC
T ss_pred CCcEEEECCCCHHHHHHHHHHHhcCCEEEEEec
Confidence 221 578888999999999987544
No 337
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=90.52 E-value=0.28 Score=39.67 Aligned_cols=61 Identities=13% Similarity=0.154 Sum_probs=46.9
Q ss_pred HHHcCCC-----CCCeEEEeC------------------CeEEEEcCCHHHHHHHHHHHH---------------Hh---
Q 042963 8 IEKARVS-----KGHDVLFLR------------------LDYTGITLSEEQLKYTEMKVK---------------EA--- 46 (171)
Q Consensus 8 l~~l~l~-----~g~rVLDIG------------------c~VtgId~S~~~~~~A~~~~~---------------~~--- 46 (171)
.+.++++ +|++||=+| ++|++++.+++..+.+++.-. +.
T Consensus 159 ~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~ 238 (363)
T 4dvj_A 159 FDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLG 238 (363)
T ss_dssp HTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSC
T ss_pred HHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCC
Confidence 4667888 899999998 289999999999888875311 00
Q ss_pred chH---------HHHHHHHhccccCcEEEEE
Q 042963 47 GLQ---------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 47 gl~---------~~~~~~~r~LkpgG~l~i~ 68 (171)
+++ ..++.+.+.|+|||++++.
T Consensus 239 g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 239 APAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp CEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred CceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence 111 4788899999999999865
No 338
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.36 E-value=0.099 Score=41.33 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=44.3
Q ss_pred HHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH----------hchH--------HHHH
Q 042963 8 IEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE----------AGLQ--------QFFG 53 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~----------~gl~--------~~~~ 53 (171)
++.+++++|++||=+|+ +|++++ |++..+.+++.-.. .+++ ..+.
T Consensus 135 l~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~~~~~ 213 (315)
T 3goh_A 135 FEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQNAA 213 (315)
T ss_dssp HTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCchhHH
Confidence 37789999999999984 999999 99999988775221 1222 3446
Q ss_pred HHHhccccCcEEEEE
Q 042963 54 CCESLLAEHGLLLLQ 68 (171)
Q Consensus 54 ~~~r~LkpgG~l~i~ 68 (171)
.+.+.|+|||+++..
T Consensus 214 ~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 214 ALVPSLKANGHIICI 228 (315)
T ss_dssp TTGGGEEEEEEEEEE
T ss_pred HHHHHhcCCCEEEEE
Confidence 778999999998865
No 339
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=90.27 E-value=0.3 Score=38.39 Aligned_cols=22 Identities=27% Similarity=0.271 Sum_probs=20.1
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL 24 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc 24 (171)
|+..+-++-=++||++|||+||
T Consensus 61 KL~EIdeK~likpg~~VVDLGa 82 (269)
T 2px2_A 61 KLRWLVERRFVQPIGKVVDLGC 82 (269)
T ss_dssp HHHHHHHTTSCCCCEEEEEETC
T ss_pred HHHHHHHcCCCCCCCEEEEcCC
Confidence 8888988877899999999998
No 340
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.00 E-value=0.24 Score=39.34 Aligned_cols=62 Identities=16% Similarity=0.119 Sum_probs=45.7
Q ss_pred HHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH--------------------hchH--
Q 042963 9 EKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE--------------------AGLQ-- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~--------------------~gl~-- 49 (171)
+.+++++|++||-+|+ +|++++.+++..+.+++.-.. .+++
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~v 218 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVV 218 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEE
Confidence 4678999999999993 899999999888877653110 0111
Q ss_pred ------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++.+.+.|+|||+++....
T Consensus 219 i~~~g~~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 219 YDSIGKDTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EECSCTTTHHHHHHTEEEEEEEEECCC
T ss_pred EECCcHHHHHHHHHhhccCCEEEEEec
Confidence 456778899999999886543
No 341
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.18 E-value=0.17 Score=40.52 Aligned_cols=60 Identities=15% Similarity=0.060 Sum_probs=45.1
Q ss_pred HcCCCCCCeEEEeC----------------C-eEEEEcCCHHHHHHHHHH---------------HHH---hchH-----
Q 042963 10 KARVSKGHDVLFLR----------------L-DYTGITLSEEQLKYTEMK---------------VKE---AGLQ----- 49 (171)
Q Consensus 10 ~l~l~~g~rVLDIG----------------c-~VtgId~S~~~~~~A~~~---------------~~~---~gl~----- 49 (171)
.+++ +|++||-+| + +|+++|.|++..+.+++. +.+ .+++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 7788 999999999 4 899999999887776543 000 1222
Q ss_pred ----HHHHHHHhccccCcEEEEEcc
Q 042963 50 ----QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ----~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++...+.|+|+|++++...
T Consensus 239 ~g~~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 239 SGNEAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp SCCHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEec
Confidence 567888999999999987543
No 342
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=88.87 E-value=0.23 Score=39.65 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=44.2
Q ss_pred cCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH--------------------hchH----
Q 042963 11 ARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE--------------------AGLQ---- 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~--------------------~gl~---- 49 (171)
+++++|++||-+|+ +|++++.+++..+.+++.-.. .+++
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~ 241 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVD 241 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEE
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEE
Confidence 58999999999994 899999999988888653110 0111
Q ss_pred ----HHHHHHHhccccCcEEEEEc
Q 042963 50 ----QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ----~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++.+.+.|+|+|++++..
T Consensus 242 ~~g~~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 242 HTGALYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp SSCSSSHHHHHHHEEEEEEEEESS
T ss_pred CCCHHHHHHHHHhhccCCEEEEEe
Confidence 45677888999999988654
No 343
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=88.74 E-value=0.66 Score=37.97 Aligned_cols=61 Identities=11% Similarity=0.102 Sum_probs=45.1
Q ss_pred cCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh--------------------chH----
Q 042963 11 ARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA--------------------GLQ---- 49 (171)
Q Consensus 11 l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~--------------------gl~---- 49 (171)
.++++|++||=+|+ +|+++|.|++..+.+++.-... |++
T Consensus 209 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid 288 (404)
T 3ip1_A 209 GGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLE 288 (404)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEE
Confidence 37999999999993 8999999999999887652110 111
Q ss_pred ----H--HHHHHHhcc----ccCcEEEEEccc
Q 042963 50 ----Q--FFGCCESLL----AEHGLLLLQFSS 71 (171)
Q Consensus 50 ----~--~~~~~~r~L----kpgG~l~i~~i~ 71 (171)
. .+..+.+.| +|||++++....
T Consensus 289 ~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 289 ATGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp CSSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 2 566666666 999999875543
No 344
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=88.40 E-value=0.7 Score=37.72 Aligned_cols=41 Identities=20% Similarity=0.210 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCC------CCeEEEeCC----------------eEEEEcCCHHHHHHHHHHH
Q 042963 3 KVSFLIEKARVSK------GHDVLFLRL----------------DYTGITLSEEQLKYTEMKV 43 (171)
Q Consensus 3 k~~~ll~~l~l~~------g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~ 43 (171)
-++.+++.+++++ ++.|||||. +|++|++++.++...++..
T Consensus 40 i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 40 VYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp HHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT
T ss_pred HHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc
Confidence 3678899999875 699999992 8999999999999888765
No 345
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=88.00 E-value=0.45 Score=38.01 Aligned_cols=63 Identities=16% Similarity=0.269 Sum_probs=46.6
Q ss_pred HHHHcCCCCCCeEEEeCC------------------eEEEEcCCHHHHHHHHHHHHH--------------------hch
Q 042963 7 LIEKARVSKGHDVLFLRL------------------DYTGITLSEEQLKYTEMKVKE--------------------AGL 48 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc------------------~VtgId~S~~~~~~A~~~~~~--------------------~gl 48 (171)
.++++++++|++||-+|+ +|+++|.+++..+.+++.-.. .++
T Consensus 162 ~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 162 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp HHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred HHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCc
Confidence 346689999999999994 799999999988887653110 012
Q ss_pred H---------HHHHHHHhccccCcEEEEEc
Q 042963 49 Q---------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 49 ~---------~~~~~~~r~LkpgG~l~i~~ 69 (171)
+ ..++...+.|+|||++++..
T Consensus 242 d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 242 DAVIDLNNSEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEEESCCCHHHHTTGGGGEEEEEEEEECC
T ss_pred eEEEECCCCHHHHHHHHHHHhcCCEEEEEC
Confidence 1 36777888899999887644
No 346
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=87.79 E-value=0.93 Score=37.47 Aligned_cols=34 Identities=12% Similarity=0.013 Sum_probs=30.9
Q ss_pred CCCCCCeEEEeCC------------------eEEEEcCCHHHHHHHHHHHHH
Q 042963 12 RVSKGHDVLFLRL------------------DYTGITLSEEQLKYTEMKVKE 45 (171)
Q Consensus 12 ~l~~g~rVLDIGc------------------~VtgId~S~~~~~~A~~~~~~ 45 (171)
.+++|+.|+|||| +|++++.++...+..+++++.
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 5689999999995 799999999999999999875
No 347
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=86.74 E-value=0.91 Score=35.77 Aligned_cols=61 Identities=16% Similarity=0.119 Sum_probs=43.7
Q ss_pred HHHHcCCCCCCeEEEeC-----------------CeEEEEcCCHHHHHHHHHHHHH-------h--------chH-----
Q 042963 7 LIEKARVSKGHDVLFLR-----------------LDYTGITLSEEQLKYTEMKVKE-------A--------GLQ----- 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~~~~~-------~--------gl~----- 49 (171)
.++.+++++|++||=+| ++|++++ +++..+.+++.-.. . +++
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~ 222 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDL 222 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEES
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEEC
Confidence 34788999999999997 3899887 55557777654211 0 111
Q ss_pred ---HHHHHHHhccccCcEEEEE
Q 042963 50 ---QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 ---~~~~~~~r~LkpgG~l~i~ 68 (171)
..++...+.|+|||+++..
T Consensus 223 ~g~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 223 VGGDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp SCHHHHHHHGGGEEEEEEEEEC
T ss_pred CCcHHHHHHHHhccCCCEEEEe
Confidence 4458889999999999864
No 348
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=86.18 E-value=0.49 Score=37.31 Aligned_cols=63 Identities=10% Similarity=0.018 Sum_probs=47.1
Q ss_pred HHHcCCCCCC-eEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh----------------chH----
Q 042963 8 IEKARVSKGH-DVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA----------------GLQ---- 49 (171)
Q Consensus 8 l~~l~l~~g~-rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~----------------gl~---- 49 (171)
+.++++++++ +||=+|+ +|++++.|++..+.+++.-... +++
T Consensus 138 ~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 138 LEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAID 217 (324)
T ss_dssp HHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEE
T ss_pred hhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEE
Confidence 3567788743 5999984 9999999999999988752110 111
Q ss_pred ----HHHHHHHhccccCcEEEEEcc
Q 042963 50 ----QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ----~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++.+.+.|+|+|++++...
T Consensus 218 ~~g~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 218 TVGDKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp SSCHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCcHHHHHHHHHHhcCCEEEEEec
Confidence 678899999999999987543
No 349
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=85.54 E-value=0.88 Score=36.65 Aligned_cols=32 Identities=16% Similarity=0.100 Sum_probs=26.4
Q ss_pred hHHHHHHHHc-----CCCCCCeEEEeCC---------------------eEEEEcCCH
Q 042963 2 RKVSFLIEKA-----RVSKGHDVLFLRL---------------------DYTGITLSE 33 (171)
Q Consensus 2 ~k~~~ll~~l-----~l~~g~rVLDIGc---------------------~VtgId~S~ 33 (171)
.|+..+|+.+ .+.-|++|||+|+ .|+++|+.+
T Consensus 91 ~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~ 148 (344)
T 3r24_A 91 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLND 148 (344)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSC
T ss_pred HHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcc
Confidence 4889999987 4578999999993 688888876
No 350
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=85.32 E-value=0.27 Score=39.65 Aligned_cols=64 Identities=22% Similarity=0.107 Sum_probs=46.4
Q ss_pred HHHHcCCC-CCCeEEEeCC----------------eEEEEcCCHHHHHHHH-HH-------------HHH--hchH----
Q 042963 7 LIEKARVS-KGHDVLFLRL----------------DYTGITLSEEQLKYTE-MK-------------VKE--AGLQ---- 49 (171)
Q Consensus 7 ll~~l~l~-~g~rVLDIGc----------------~VtgId~S~~~~~~A~-~~-------------~~~--~gl~---- 49 (171)
.+.+++++ +|++||=+|+ +|+++|.+++..+.++ +. ..+ .+++
T Consensus 171 ~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid 250 (357)
T 2cf5_A 171 PLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVID 250 (357)
T ss_dssp HHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEE
T ss_pred HHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEE
Confidence 45667898 9999999994 8999999998887776 21 010 0111
Q ss_pred -----HHHHHHHhccccCcEEEEEcc
Q 042963 50 -----QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 -----~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++...+.|+|||++++...
T Consensus 251 ~~g~~~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 251 TVPVHHALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CCCSCCCSHHHHTTEEEEEEEEECSC
T ss_pred CCCChHHHHHHHHHhccCCEEEEeCC
Confidence 356778899999999987543
No 351
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=84.68 E-value=1.4 Score=35.84 Aligned_cols=63 Identities=13% Similarity=0.014 Sum_probs=47.8
Q ss_pred HHHcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHH----------------HH----hchH-
Q 042963 8 IEKARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKV----------------KE----AGLQ- 49 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~----------------~~----~gl~- 49 (171)
++.+++++|++||-+|| +|+++|.|++..+.+++.- .+ .+++
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dv 257 (398)
T 2dph_A 178 CVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDC 257 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCE
Confidence 46789999999999994 8999999999988876421 00 0222
Q ss_pred -------H---------------HHHHHHhccccCcEEEEEcc
Q 042963 50 -------Q---------------FFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 -------~---------------~~~~~~r~LkpgG~l~i~~i 70 (171)
. .++.+.+.|+|||++++...
T Consensus 258 vid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 258 GVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred EEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 2 57888999999999986543
No 352
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=84.45 E-value=1.1 Score=35.74 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=46.7
Q ss_pred HHHcCCCCC--CeEEEeCC------------------eEEEEcCCHHHHHHHHHHHH--------Hh------------c
Q 042963 8 IEKARVSKG--HDVLFLRL------------------DYTGITLSEEQLKYTEMKVK--------EA------------G 47 (171)
Q Consensus 8 l~~l~l~~g--~rVLDIGc------------------~VtgId~S~~~~~~A~~~~~--------~~------------g 47 (171)
.+.+++++| ++||-.|+ +|++++.+++..+.+++... .. +
T Consensus 151 ~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 151 QEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp HHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTC
T ss_pred HHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCC
Confidence 367899999 99999993 89999999988877765110 00 1
Q ss_pred hH--------HHHHHHHhccccCcEEEEEc
Q 042963 48 LQ--------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 48 l~--------~~~~~~~r~LkpgG~l~i~~ 69 (171)
++ ..++.+.+.|+|||++++..
T Consensus 231 ~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 231 VDVYFDNVGGNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp EEEEEESCCHHHHHHHHHTEEEEEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHhccCcEEEEEC
Confidence 11 56778889999999998754
No 353
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=84.17 E-value=2.2 Score=35.45 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=46.3
Q ss_pred cCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH----------------------------
Q 042963 11 ARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE---------------------------- 45 (171)
Q Consensus 11 l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~---------------------------- 45 (171)
+++++|++||=+|+ +|++++.|++..+.+++.-..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHH
Confidence 68999999999994 899999999999888764110
Q ss_pred ---------hchH--------HHHHHHHhccccCcEEEEEcc
Q 042963 46 ---------AGLQ--------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 46 ---------~gl~--------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++ ..++...+.|+|||++++...
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEec
Confidence 0111 677888899999999987543
No 354
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=84.06 E-value=1.5 Score=34.88 Aligned_cols=57 Identities=18% Similarity=0.174 Sum_probs=43.5
Q ss_pred CCCCCCeEEEeCC------------------eEEEEcCCHHHHHHHHHHHH-------H-h----------chH------
Q 042963 12 RVSKGHDVLFLRL------------------DYTGITLSEEQLKYTEMKVK-------E-A----------GLQ------ 49 (171)
Q Consensus 12 ~l~~g~rVLDIGc------------------~VtgId~S~~~~~~A~~~~~-------~-~----------gl~------ 49 (171)
++ +|++||-+|+ +|+++|.|++..+.+++.-. . . +++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~ 246 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLV 246 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECC
Confidence 88 9999999883 69999999999888875310 1 0 222
Q ss_pred ---HHHHHHHhccccCcEEEEEc
Q 042963 50 ---QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ---~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++.+.+.|+|||++++..
T Consensus 247 g~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 247 GTEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp CCHHHHHHHHHHEEEEEEEEECC
T ss_pred CChHHHHHHHHHhhcCCEEEEeC
Confidence 47888899999999988654
No 355
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=83.09 E-value=0.58 Score=36.99 Aligned_cols=62 Identities=18% Similarity=0.089 Sum_probs=46.7
Q ss_pred HHcCCCCCC-eEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH-------Hh-----------chH---
Q 042963 9 EKARVSKGH-DVLFLRL-----------------DYTGITLSEEQLKYTEMKVK-------EA-----------GLQ--- 49 (171)
Q Consensus 9 ~~l~l~~g~-rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~-------~~-----------gl~--- 49 (171)
+++++++|+ +||=+|+ +|++++.+++..+.+++.-. .. +++
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vi 222 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAV 222 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEE
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEE
Confidence 557899997 9999994 89999999888888875311 10 111
Q ss_pred -----HHHHHHHhccccCcEEEEEcc
Q 042963 50 -----QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 -----~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++...+.|+|||++++...
T Consensus 223 d~~g~~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 223 DPVGGKQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp ESCCTHHHHHHHTTEEEEEEEEECCC
T ss_pred ECCcHHHHHHHHHhhcCCCEEEEEec
Confidence 667888899999999987543
No 356
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=82.13 E-value=4.3 Score=33.43 Aligned_cols=60 Identities=15% Similarity=0.032 Sum_probs=45.8
Q ss_pred HcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHH-------H--------------------
Q 042963 10 KARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVK-------E-------------------- 45 (171)
Q Consensus 10 ~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~-------~-------------------- 45 (171)
.+++++|++||=+|+ +|++++.+++..+.+++.-. .
T Consensus 215 ~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 215 GAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp TTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhH
Confidence 478999999999994 89999999998888765310 0
Q ss_pred ----------hchH--------HHHHHHHhccccCcEEEEEc
Q 042963 46 ----------AGLQ--------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 46 ----------~gl~--------~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++ ..++...+.|++||++++..
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEe
Confidence 0122 56788889999999998754
No 357
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=79.80 E-value=0.45 Score=37.59 Aligned_cols=63 Identities=11% Similarity=0.038 Sum_probs=45.7
Q ss_pred HHHcCCCCCC-eEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH------------------hchH--
Q 042963 8 IEKARVSKGH-DVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE------------------AGLQ-- 49 (171)
Q Consensus 8 l~~l~l~~g~-rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~------------------~gl~-- 49 (171)
++++++++|+ +||=+|+ +|++++.+++..+.+++.-.. .+++
T Consensus 141 ~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~v 220 (328)
T 1xa0_A 141 LEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAA 220 (328)
T ss_dssp HHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEE
T ss_pred HhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEE
Confidence 3567899997 9999994 899999998888877653110 0111
Q ss_pred ------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++...+.|+|||++++...
T Consensus 221 id~~g~~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 221 VDPVGGRTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp EECSTTTTHHHHHHTEEEEEEEEECSC
T ss_pred EECCcHHHHHHHHHhhccCCEEEEEee
Confidence 456778889999999987543
No 358
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=78.19 E-value=1.9 Score=34.40 Aligned_cols=44 Identities=9% Similarity=0.149 Sum_probs=35.7
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCHHHHHHHHHHHHHhch
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSEEQLKYTEMKVKEAGL 48 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~~~~~~A~~~~~~~gl 48 (171)
++++++.. .++|+.|||-=| +.+|+|+++..++.|+++++..+.
T Consensus 242 ~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 242 PEFFIRML-TEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 44555444 589999999875 999999999999999999876664
No 359
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=77.46 E-value=2.2 Score=34.22 Aligned_cols=61 Identities=21% Similarity=0.147 Sum_probs=45.8
Q ss_pred HcCCC--C-------CCeEEEeCC----------------eEEEEcCCH---HHHHHHHHHH-------------HH--h
Q 042963 10 KARVS--K-------GHDVLFLRL----------------DYTGITLSE---EQLKYTEMKV-------------KE--A 46 (171)
Q Consensus 10 ~l~l~--~-------g~rVLDIGc----------------~VtgId~S~---~~~~~A~~~~-------------~~--~ 46 (171)
.++++ + |++||-+|+ +|++++.++ +..+.+++.- .+ .
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~ 245 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVG 245 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHC
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCC
Confidence 67888 8 999999993 899999998 7777776431 10 1
Q ss_pred chH---------HHH-HHHHhccccCcEEEEEcc
Q 042963 47 GLQ---------QFF-GCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 47 gl~---------~~~-~~~~r~LkpgG~l~i~~i 70 (171)
+++ ..+ +.+.+.|+|||++++...
T Consensus 246 ~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 246 KFDVIIDATGADVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSC
T ss_pred CCCEEEECCCChHHHHHHHHHHHhcCCEEEEEec
Confidence 222 467 889999999999987544
No 360
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=77.12 E-value=2.8 Score=33.40 Aligned_cols=42 Identities=12% Similarity=0.065 Sum_probs=31.8
Q ss_pred HHHHHHHcCCCCCCeEEEeCC--------------eEEEEcCCH---HHHHHHHHHHHHh
Q 042963 4 VSFLIEKARVSKGHDVLFLRL--------------DYTGITLSE---EQLKYTEMKVKEA 46 (171)
Q Consensus 4 ~~~ll~~l~l~~g~rVLDIGc--------------~VtgId~S~---~~~~~A~~~~~~~ 46 (171)
++++++.. ..+|+.|||-=| +.+|+|+++ +.++.|++++.+.
T Consensus 232 ~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 232 IERLVRAL-SHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 45556554 489999999864 999999999 9999998887544
No 361
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=77.01 E-value=6.5 Score=31.26 Aligned_cols=16 Identities=13% Similarity=0.162 Sum_probs=13.6
Q ss_pred HHcCCCCCCeEEEeCC
Q 042963 9 EKARVSKGHDVLFLRL 24 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc 24 (171)
+.+++++|++||=+|+
T Consensus 161 ~~~~~~~g~~VlV~Ga 176 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNAS 176 (357)
T ss_dssp HSSCCCTTCEEEESST
T ss_pred HHhccCCCCEEEEeCC
Confidence 4468999999999994
No 362
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=75.46 E-value=3.6 Score=32.87 Aligned_cols=63 Identities=11% Similarity=0.039 Sum_probs=45.1
Q ss_pred HHHHcCCCCCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHHHH-------h---------chH-----
Q 042963 7 LIEKARVSKGHDVLFLRL----------------DYTGITLSEEQLKYTEMKVKE-------A---------GLQ----- 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~~~-------~---------gl~----- 49 (171)
.+.++++++|++||-+|+ +|++++.|++..+.+++.-.. . +++
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~ 250 (360)
T 1piw_A 171 PLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVC 250 (360)
T ss_dssp HHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEEC
Confidence 345689999999999994 899999999988888764211 1 111
Q ss_pred ------HHHHHHHhccccCcEEEEEc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++.+.+.|+|||+++...
T Consensus 251 ~g~~~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 251 ASSLTDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCSTTCCTTTGGGGEEEEEEEEECC
T ss_pred CCCCcHHHHHHHHHHhcCCCEEEEec
Confidence 13456677888888887643
No 363
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=75.01 E-value=1.8 Score=34.48 Aligned_cols=62 Identities=5% Similarity=0.034 Sum_probs=42.7
Q ss_pred HHHHcCCCCC-CeEEEeC-----------------CeEEEEcCCHHHHHHHHHHHHH--------------------hch
Q 042963 7 LIEKARVSKG-HDVLFLR-----------------LDYTGITLSEEQLKYTEMKVKE--------------------AGL 48 (171)
Q Consensus 7 ll~~l~l~~g-~rVLDIG-----------------c~VtgId~S~~~~~~A~~~~~~--------------------~gl 48 (171)
+++.++ ++| ++||=.| ++|++++.+++..+.+++.-.. .++
T Consensus 156 ~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 156 MFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp HHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCC
T ss_pred HHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCC
Confidence 455566 666 5777543 4999999999988888754211 111
Q ss_pred H--------HHHHHHHhccccCcEEEEEc
Q 042963 49 Q--------QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 49 ~--------~~~~~~~r~LkpgG~l~i~~ 69 (171)
+ ..++.+.+.|+|||++++..
T Consensus 235 D~vid~~g~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 235 RIFLDAVTGPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CEEEESSCHHHHHHHHHHSCTTCEEEECC
T ss_pred cEEEECCCChhHHHHHhhhcCCCEEEEEe
Confidence 1 45677889999999998754
No 364
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=73.92 E-value=17 Score=28.75 Aligned_cols=23 Identities=17% Similarity=0.131 Sum_probs=17.7
Q ss_pred HHHHHHHhccccCcEEEEEcccC
Q 042963 50 QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++.+.+.+.||+.+++..+..
T Consensus 199 ~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 199 GLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp HHHHHHHHTCCTTCEEEEECCCT
T ss_pred HHHHHHHHhCCCCeEEEEEecCC
Confidence 67778888888999888876544
No 365
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=68.72 E-value=3.2 Score=33.34 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=25.0
Q ss_pred HHcC----CCCCCeEEEeC-----------------CeEEEEcCCHHHHHHHHH
Q 042963 9 EKAR----VSKGHDVLFLR-----------------LDYTGITLSEEQLKYTEM 41 (171)
Q Consensus 9 ~~l~----l~~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~ 41 (171)
+.++ +++|++||=+| ++|++++ +++..+.+++
T Consensus 173 ~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~ 225 (375)
T 2vn8_A 173 KVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK 225 (375)
T ss_dssp TTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH
T ss_pred HhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH
Confidence 3456 89999999999 2899988 7777776654
No 366
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=67.10 E-value=8.9 Score=30.70 Aligned_cols=55 Identities=16% Similarity=0.063 Sum_probs=39.4
Q ss_pred CCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHHh-------------------chH--------
Q 042963 14 SKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKEA-------------------GLQ-------- 49 (171)
Q Consensus 14 ~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~~-------------------gl~-------- 49 (171)
++|++||=+|+ +|+++. |++..+.+++.-... +++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 89999999984 888875 888888776541110 011
Q ss_pred -HHHHHHHhcc-ccCcEEEEEc
Q 042963 50 -QFFGCCESLL-AEHGLLLLQF 69 (171)
Q Consensus 50 -~~~~~~~r~L-kpgG~l~i~~ 69 (171)
..++.+.+.| ++||+++...
T Consensus 242 ~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 242 VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp HHHHHHHHHHSCTTCEEEEESS
T ss_pred hHHHHHHHHHhhcCCCEEEEEe
Confidence 5677788889 6999998654
No 367
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=65.07 E-value=2.6 Score=33.52 Aligned_cols=63 Identities=29% Similarity=0.250 Sum_probs=37.1
Q ss_pred HHHHcCCCCCCeEEEeCC------------------eEEEEcCCHHHHHHHHH--------------HHHH---hchH--
Q 042963 7 LIEKARVSKGHDVLFLRL------------------DYTGITLSEEQLKYTEM--------------KVKE---AGLQ-- 49 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc------------------~VtgId~S~~~~~~A~~--------------~~~~---~gl~-- 49 (171)
+.+.+++++|++||=+|+ +|++++ +++..+.++. ...+ .|++
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~g~Dvv 212 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIV 212 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHGGGSSEEEETTSCHHHHHHHHCTTCEEEE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHHcCCcEEEcCCccHHHHHHHhcCCCceEE
Confidence 346689999999999994 788877 5555554431 0000 1221
Q ss_pred ------HHHHHHHhccccCcEEEEEcc
Q 042963 50 ------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ------~~~~~~~r~LkpgG~l~i~~i 70 (171)
..++.+.+.|+|||++++...
T Consensus 213 ~d~~g~~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 213 LDCLCGDNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp EEECC-------CTTEEEEEEEEEEC-
T ss_pred EECCCchhHHHHHHHhhcCCEEEEECC
Confidence 345777889999999987543
No 368
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=61.33 E-value=9 Score=38.91 Aligned_cols=60 Identities=22% Similarity=0.285 Sum_probs=45.4
Q ss_pred HHcCCCCCCeEEEeC-----------------CeEEEEcCCHHHHHHHHHHHHH------------------------hc
Q 042963 9 EKARVSKGHDVLFLR-----------------LDYTGITLSEEQLKYTEMKVKE------------------------AG 47 (171)
Q Consensus 9 ~~l~l~~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~~~~~------------------------~g 47 (171)
+..++++|++||=.| |+|++++.+++..+.+++.... .|
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~G 1740 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKG 1740 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCC
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCC
Confidence 456899999999987 4899999999888887753100 01
Q ss_pred hH--------HHHHHHHhccccCcEEEEE
Q 042963 48 LQ--------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 48 l~--------~~~~~~~r~LkpgG~l~i~ 68 (171)
++ ..++...+.|+|||+++..
T Consensus 1741 vDvVld~~g~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1741 VDLVLNSLAEEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp EEEEEECCCHHHHHHHHTTEEEEEEEEEC
T ss_pred ceEEEECCCchHHHHHHHhcCCCcEEEEe
Confidence 11 6678888999999999864
No 369
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=60.43 E-value=4.9 Score=36.12 Aligned_cols=61 Identities=13% Similarity=0.103 Sum_probs=39.1
Q ss_pred HHcCCCCCCeEEEeCC-----------------eEEEEcCCHHH------------------HHHHHHHHHHhchH----
Q 042963 9 EKARVSKGHDVLFLRL-----------------DYTGITLSEEQ------------------LKYTEMKVKEAGLQ---- 49 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc-----------------~VtgId~S~~~------------------~~~A~~~~~~~gl~---- 49 (171)
+..++++|++||=.|+ +|++++.+++. .+..++.....|++
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld 418 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLN 418 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGGGGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEE
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHHhhhhhcChhheeecCChhHHHHHHHHcCCCCeEEEEE
Confidence 4468999999999983 88888755421 11111111111232
Q ss_pred ----HHHHHHHhccccCcEEEEEc
Q 042963 50 ----QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ----~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++...+.|+|||+++...
T Consensus 419 ~~gg~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 419 SLAGEFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp CCCTTTTHHHHTSCTTCEEEEECC
T ss_pred CCCcHHHHHHHHHhcCCCEEEEec
Confidence 56788899999999998643
No 370
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=56.26 E-value=5.8 Score=31.57 Aligned_cols=63 Identities=14% Similarity=0.086 Sum_probs=45.8
Q ss_pred HHHcCCCCC------CeEEEeCC------------------e-EEEEcCCHH---HHHHHHHHHH--------------H
Q 042963 8 IEKARVSKG------HDVLFLRL------------------D-YTGITLSEE---QLKYTEMKVK--------------E 45 (171)
Q Consensus 8 l~~l~l~~g------~rVLDIGc------------------~-VtgId~S~~---~~~~A~~~~~--------------~ 45 (171)
++++++++| ++||=+|+ + |++++.+++ ..+.+++.-. +
T Consensus 159 l~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~ 238 (357)
T 2b5w_A 159 LEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPD 238 (357)
T ss_dssp HHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHH
T ss_pred HHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHH
Confidence 366778889 99998872 4 999999988 8888775311 0
Q ss_pred --hchH---------HHHHHHHhccccCcEEEEEcc
Q 042963 46 --AGLQ---------QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 46 --~gl~---------~~~~~~~r~LkpgG~l~i~~i 70 (171)
.+++ ..++.+.+.|+|||++++...
T Consensus 239 ~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 239 VYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp HSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCC
T ss_pred hCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeC
Confidence 0222 478888899999999887543
No 371
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=55.47 E-value=4.8 Score=31.40 Aligned_cols=19 Identities=21% Similarity=0.261 Sum_probs=16.9
Q ss_pred HHHHHHHhccccCcEEEEE
Q 042963 50 QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~ 68 (171)
..++++.++|||||.+++.
T Consensus 78 ~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 78 RVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEE
Confidence 6788999999999999875
No 372
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=55.39 E-value=49 Score=26.61 Aligned_cols=63 Identities=14% Similarity=0.113 Sum_probs=43.8
Q ss_pred HHHHHc-CCCCCCeEEEeCC------------eEEEEcCCHHHHHHHHHHHHHhchH-----------------------
Q 042963 6 FLIEKA-RVSKGHDVLFLRL------------DYTGITLSEEQLKYTEMKVKEAGLQ----------------------- 49 (171)
Q Consensus 6 ~ll~~l-~l~~g~rVLDIGc------------~VtgId~S~~~~~~A~~~~~~~gl~----------------------- 49 (171)
.+++.+ ++.++.+||.|+. .++.++-|---....+.+++..+++
T Consensus 28 ~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 107 (375)
T 4dcm_A 28 YLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIK 107 (375)
T ss_dssp HHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGCCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTSCCCSSCSEEEEE
T ss_pred HHHHhhhhccCCCCEEEECCCCCHHHHhhccCCceEEEhHHHHHHHHHHHHHHcCCCccceEecccccccccCCCEEEEE
Confidence 456664 3446678999992 7888865655555566666665542
Q ss_pred ---------HHHHHHHhccccCcEEEEE
Q 042963 50 ---------QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 ---------~~~~~~~r~LkpgG~l~i~ 68 (171)
..++.+...|+||+++++.
T Consensus 108 lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 108 VPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp CCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred cCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 5567888899999998764
No 373
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=55.00 E-value=34 Score=26.92 Aligned_cols=17 Identities=24% Similarity=0.169 Sum_probs=13.2
Q ss_pred HHHHhccccCcEEEEEc
Q 042963 53 GCCESLLAEHGLLLLQF 69 (171)
Q Consensus 53 ~~~~r~LkpgG~l~i~~ 69 (171)
....+.|+|||++++..
T Consensus 259 ~~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 259 TGIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHHTSCTTCEEEECC
T ss_pred HHHHHHhccCCEEEEec
Confidence 36678999999988654
No 374
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=53.30 E-value=5.7 Score=31.41 Aligned_cols=21 Identities=24% Similarity=0.311 Sum_probs=17.5
Q ss_pred HHHHHHHhccccCcEEEEEcc
Q 042963 50 QFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~~i 70 (171)
..+..+.++|+|||++++.+.
T Consensus 214 ~~L~~a~~~L~~gGrl~visf 234 (285)
T 1wg8_A 214 EFLEQAAEVLAPGGRLVVIAF 234 (285)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEEec
Confidence 667788999999999998653
No 375
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=53.17 E-value=27 Score=27.65 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=27.9
Q ss_pred cCCCCCCeEEEeC-----------------CeEEEEcCCHHHHHHHHHH
Q 042963 11 ARVSKGHDVLFLR-----------------LDYTGITLSEEQLKYTEMK 42 (171)
Q Consensus 11 l~l~~g~rVLDIG-----------------c~VtgId~S~~~~~~A~~~ 42 (171)
+++++|++||=+| ++|+++|.|++..+.+++.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l 230 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL 230 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence 8999999999987 4899999999988888753
No 376
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=51.84 E-value=6.1 Score=40.13 Aligned_cols=57 Identities=25% Similarity=0.262 Sum_probs=30.7
Q ss_pred CCCCeEEEeCC---------------------eEEEEcCCHHHHHHHHHHHHHh-------------c------------
Q 042963 14 SKGHDVLFLRL---------------------DYTGITLSEEQLKYTEMKVKEA-------------G------------ 47 (171)
Q Consensus 14 ~~g~rVLDIGc---------------------~VtgId~S~~~~~~A~~~~~~~-------------g------------ 47 (171)
.|.++|||||. +.|-.|+|+...+.|+++.+.. +
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEc
Confidence 57899999983 4677789987776666654321 0
Q ss_pred --------hHHHHHHHHhccccCcEEEEEcc
Q 042963 48 --------LQQFFGCCESLLAEHGLLLLQFS 70 (171)
Q Consensus 48 --------l~~~~~~~~r~LkpgG~l~i~~i 70 (171)
+...++.+++.|||||++++...
T Consensus 1319 ~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1319 CALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp CC--------------------CCEEEEEEC
T ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 01457788999999999988653
No 377
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=51.68 E-value=9.2 Score=31.27 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=26.8
Q ss_pred HHHHHHHHcCCCC-----CCeEEEeCCeE--EEEcCCHHHHHHHHHHHHHhc
Q 042963 3 KVSFLIEKARVSK-----GHDVLFLRLDY--TGITLSEEQLKYTEMKVKEAG 47 (171)
Q Consensus 3 k~~~ll~~l~l~~-----g~rVLDIGc~V--tgId~S~~~~~~A~~~~~~~g 47 (171)
.++..++.+.+.+ ..+|+|+||.. .++-+-.++++.++++....+
T Consensus 35 ~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~ 86 (374)
T 3b5i_A 35 LLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAG 86 (374)
T ss_dssp HHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcC
Confidence 3455667776664 68999999921 111222346777777665433
No 378
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=51.08 E-value=19 Score=22.86 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=27.9
Q ss_pred EEEcCCHHHHHHHHHHHHHhchH-----------------HHHHHHHhcccc
Q 042963 27 TGITLSEEQLKYTEMKVKEAGLQ-----------------QFFGCCESLLAE 61 (171)
Q Consensus 27 tgId~S~~~~~~A~~~~~~~gl~-----------------~~~~~~~r~Lkp 61 (171)
..||+++++.+..+..++..|.+ +.++++...|+|
T Consensus 4 LTIrLpd~qH~rLKalAa~qG~SInqli~E~lf~~~~~~~~aw~el~~~l~~ 55 (83)
T 2an7_A 4 LTIDMTDQQHQSLKALAALQGKTIKQYALERLFPGDADADQAWQELKTMLGN 55 (83)
T ss_dssp EEEEECHHHHHHHHHHHHHHTSCHHHHHHHHTSCCCSSHHHHHHHHHHHSCS
T ss_pred eeEeCCHHHHHHHHHHHHHcCCcHHHHHHHHcccCCCcHHHHHHHHHHHHHH
Confidence 57899999999999999999875 556666666655
No 379
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=49.61 E-value=17 Score=27.95 Aligned_cols=59 Identities=22% Similarity=0.138 Sum_probs=42.0
Q ss_pred HcCCCCCCeEEEeCC-----------------eEEEEcCCHHHHHHHHHHHHH--------h-------chH-------H
Q 042963 10 KARVSKGHDVLFLRL-----------------DYTGITLSEEQLKYTEMKVKE--------A-------GLQ-------Q 50 (171)
Q Consensus 10 ~l~l~~g~rVLDIGc-----------------~VtgId~S~~~~~~A~~~~~~--------~-------gl~-------~ 50 (171)
.. +++|++||-+|+ +|++++.+++..+.+++.-.. . +++ .
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid~g~~ 199 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGK 199 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEECSCT
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEECCHH
Confidence 45 999999999994 899999999888877653110 0 110 2
Q ss_pred HHHHHHhccccCcEEEEEc
Q 042963 51 FFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 51 ~~~~~~r~LkpgG~l~i~~ 69 (171)
.++...+.|+|+|+++...
T Consensus 200 ~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 200 EVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp THHHHHTTEEEEEEEEEC-
T ss_pred HHHHHHHhhccCCEEEEEe
Confidence 4567778899999887643
No 380
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=47.99 E-value=7.4 Score=30.82 Aligned_cols=19 Identities=16% Similarity=0.303 Sum_probs=16.9
Q ss_pred HHHHHHHhccccCcEEEEE
Q 042963 50 QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~ 68 (171)
..+++++++|||||.+++.
T Consensus 65 ~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 65 SFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHCcCCcEEEEE
Confidence 6778899999999999985
No 381
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=46.13 E-value=30 Score=27.47 Aligned_cols=63 Identities=19% Similarity=0.135 Sum_probs=45.3
Q ss_pred HHHHcCCC-CCCeEEEeCC----------------eEEEEcCCHHHHHHHHHHH--------------HH--hchH----
Q 042963 7 LIEKARVS-KGHDVLFLRL----------------DYTGITLSEEQLKYTEMKV--------------KE--AGLQ---- 49 (171)
Q Consensus 7 ll~~l~l~-~g~rVLDIGc----------------~VtgId~S~~~~~~A~~~~--------------~~--~gl~---- 49 (171)
.+.+++++ +|++||=+|+ +|++++.+++..+.+++.. .+ .+++
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid 257 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIID 257 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEE
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEE
Confidence 45667888 9999999994 8999999998887766221 00 0111
Q ss_pred -----HHHHHHHhccccCcEEEEEc
Q 042963 50 -----QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 -----~~~~~~~r~LkpgG~l~i~~ 69 (171)
..++...+.|+|||+++...
T Consensus 258 ~~g~~~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 258 TVSAVHPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp CCSSCCCSHHHHHHEEEEEEEEECC
T ss_pred CCCcHHHHHHHHHHHhcCCEEEEEc
Confidence 24677788999999988654
No 382
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=42.28 E-value=9.5 Score=30.07 Aligned_cols=20 Identities=25% Similarity=0.389 Sum_probs=17.2
Q ss_pred HHHHHHHhccccCcEEEEEc
Q 042963 50 QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~~ 69 (171)
..+..+.++|+|||++++.+
T Consensus 226 ~~l~~~~~~l~~ggr~~vis 245 (301)
T 1m6y_A 226 EFLKKAEDLLNPGGRIVVIS 245 (301)
T ss_dssp HHHHHGGGGEEEEEEEEEEE
T ss_pred HHHHHHHHhhCCCCEEEEEe
Confidence 66778899999999999865
No 383
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=41.63 E-value=11 Score=28.70 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=16.6
Q ss_pred HHHHHHHhccccCcEEEEE
Q 042963 50 QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~ 68 (171)
..+++++++|+|||.+++.
T Consensus 55 ~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 55 RWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCeEEEEE
Confidence 5678889999999999886
No 384
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=38.01 E-value=1.5e+02 Score=23.41 Aligned_cols=47 Identities=13% Similarity=0.171 Sum_probs=35.9
Q ss_pred eEEEEcCCHHHHHHHHHHHHHh-------c-------h----H------------------------------HHHHHHH
Q 042963 25 DYTGITLSEEQLKYTEMKVKEA-------G-------L----Q------------------------------QFFGCCE 56 (171)
Q Consensus 25 ~VtgId~S~~~~~~A~~~~~~~-------g-------l----~------------------------------~~~~~~~ 56 (171)
+|+-+|++++.++.+.+++++. | . . ++|+++.
T Consensus 31 ~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~ 110 (319)
T 3ado_A 31 RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLD 110 (319)
T ss_dssp CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHhccCcEEeeccccHHHHHHHHHHHHH
Confidence 9999999999998887765421 1 0 0 8899999
Q ss_pred hccccCcEEEEEccc
Q 042963 57 SLLAEHGLLLLQFSS 71 (171)
Q Consensus 57 r~LkpgG~l~i~~i~ 71 (171)
++++|+-.+.-.+-+
T Consensus 111 ~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 111 SIVDDRVVLSSSSSC 125 (319)
T ss_dssp TTCCSSSEEEECCSS
T ss_pred HHhhhcceeehhhhh
Confidence 999999988765433
No 385
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=35.99 E-value=15 Score=29.15 Aligned_cols=20 Identities=15% Similarity=0.263 Sum_probs=16.9
Q ss_pred HHHHHHHhccccCcEEEEEc
Q 042963 50 QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~~ 69 (171)
..+.++.++|+|||.+++..
T Consensus 87 ~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 87 RWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEc
Confidence 56678899999999999863
No 386
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=35.18 E-value=19 Score=25.16 Aligned_cols=18 Identities=17% Similarity=0.242 Sum_probs=16.2
Q ss_pred HHHHHHHhccccCcEEEE
Q 042963 50 QFFGCCESLLAEHGLLLL 67 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i 67 (171)
..+..+.+.|||||+|..
T Consensus 79 ~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 79 KLISVLADSLKPNGSLIG 96 (136)
T ss_dssp HHHHHHHTTCCTTCCEEC
T ss_pred HHHHHHHHHhCCCCEEEe
Confidence 788999999999999974
No 387
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=31.07 E-value=60 Score=24.46 Aligned_cols=53 Identities=8% Similarity=0.097 Sum_probs=29.3
Q ss_pred CCCCCe-EEEeCC----------eEEEE-cCCHHHHHHHHHHHH--HhchH---------HHHHHHHhccccCcEE
Q 042963 13 VSKGHD-VLFLRL----------DYTGI-TLSEEQLKYTEMKVK--EAGLQ---------QFFGCCESLLAEHGLL 65 (171)
Q Consensus 13 l~~g~r-VLDIGc----------~VtgI-d~S~~~~~~A~~~~~--~~gl~---------~~~~~~~r~LkpgG~l 65 (171)
+++|+- ++|+|| +..-+ +.+++|.+..+...+ ...+. ++.+.+.++++..|.-
T Consensus 89 l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~ 164 (262)
T 3mx6_A 89 LKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYS 164 (262)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTCE
T ss_pred cCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc
Confidence 567765 469996 22223 678887765443321 22222 5666666666666643
No 388
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=30.56 E-value=39 Score=20.76 Aligned_cols=18 Identities=22% Similarity=0.241 Sum_probs=15.3
Q ss_pred HHHHcCCCCCCeEEEeCC
Q 042963 7 LIEKARVSKGHDVLFLRL 24 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc 24 (171)
..+++++++|+.|+.|.-
T Consensus 31 ~A~~aGl~~GD~I~~ing 48 (87)
T 2i6v_A 31 LFESIGLQDGDMAVALNG 48 (87)
T ss_dssp HHHHTTCCTTCEEEEETT
T ss_pred HHHHCCCCCCCEEEEECC
Confidence 457889999999999974
No 389
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=28.89 E-value=25 Score=27.11 Aligned_cols=23 Identities=4% Similarity=0.070 Sum_probs=20.1
Q ss_pred HHHHHHHhccccCcEEEEEcccC
Q 042963 50 QFFGCCESLLAEHGLLLLQFSSV 72 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~~i~~ 72 (171)
.+++.+...|+|||.+++.++..
T Consensus 198 ~~le~~~p~l~~GGvIv~DD~~~ 220 (257)
T 3tos_A 198 AVLEAIRPYLTKGSIVAFDELDN 220 (257)
T ss_dssp HHHHHHGGGEEEEEEEEESSTTC
T ss_pred HHHHHHHHHhCCCcEEEEcCCCC
Confidence 57888999999999999998754
No 390
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=28.27 E-value=23 Score=28.36 Aligned_cols=20 Identities=25% Similarity=0.403 Sum_probs=17.6
Q ss_pred HHHHHHHhccccCcEEEEEc
Q 042963 50 QFFGCCESLLAEHGLLLLQF 69 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~~ 69 (171)
.+++.+.++|+|||++++..
T Consensus 145 ~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 145 AFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEE
Confidence 78899999999999998753
No 391
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=26.83 E-value=30 Score=21.60 Aligned_cols=17 Identities=6% Similarity=0.085 Sum_probs=14.8
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++||+|.-
T Consensus 36 A~~aGl~~GD~Il~VNG 52 (82)
T 1r6j_A 36 AARNGLLTEHNICEING 52 (82)
T ss_dssp HHHHTCCSSEEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999985
No 392
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=26.53 E-value=42 Score=20.58 Aligned_cols=17 Identities=6% Similarity=-0.068 Sum_probs=14.3
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++||.|.-
T Consensus 45 A~~aGl~~GD~I~~vng 61 (91)
T 1m5z_A 45 GDLGGLKPYDRLLQVNH 61 (91)
T ss_dssp HHHHTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 45679999999999984
No 393
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=26.36 E-value=80 Score=21.00 Aligned_cols=26 Identities=12% Similarity=0.077 Sum_probs=21.1
Q ss_pred CCeEEEeCC----------------eEEEEcCCHHHHHHHHH
Q 042963 16 GHDVLFLRL----------------DYTGITLSEEQLKYTEM 41 (171)
Q Consensus 16 g~rVLDIGc----------------~VtgId~S~~~~~~A~~ 41 (171)
.++|+=+|| +|+++|.+++.++.+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~ 48 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE 48 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Confidence 457888885 89999999998887664
No 394
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=26.32 E-value=24 Score=28.04 Aligned_cols=19 Identities=16% Similarity=0.309 Sum_probs=17.2
Q ss_pred HHHHHHHhccccCcEEEEE
Q 042963 50 QFFGCCESLLAEHGLLLLQ 68 (171)
Q Consensus 50 ~~~~~~~r~LkpgG~l~i~ 68 (171)
.+|+.+++.++|||+++-.
T Consensus 207 e~f~~l~~~~~pgg~laTY 225 (308)
T 3vyw_A 207 DFLSLIKERIDEKGYWVSY 225 (308)
T ss_dssp HHHHHHHTTEEEEEEEEES
T ss_pred HHHHHHHHHhCCCcEEEEE
Confidence 8999999999999999743
No 395
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=26.27 E-value=47 Score=20.14 Aligned_cols=17 Identities=12% Similarity=0.169 Sum_probs=14.3
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 39 A~~aGL~~GD~I~~ing 55 (87)
T 2pa1_A 39 AKDADLRPGDIIVAING 55 (87)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 45789999999999973
No 396
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=26.27 E-value=47 Score=20.36 Aligned_cols=17 Identities=12% Similarity=0.028 Sum_probs=14.5
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 40 A~~aGl~~GD~I~~ing 56 (91)
T 2pkt_A 40 AALANLCIGDVITAIDG 56 (91)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999984
No 397
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=25.86 E-value=49 Score=20.19 Aligned_cols=17 Identities=29% Similarity=0.186 Sum_probs=14.3
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++|+.|.-
T Consensus 40 A~~aGl~~GD~I~~ing 56 (89)
T 2q3g_A 40 AAQAGVAVGDWVLSIDG 56 (89)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999973
No 398
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=25.77 E-value=48 Score=21.26 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=14.7
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++||.|.-
T Consensus 48 A~~aGL~~GD~Il~vng 64 (94)
T 3kzd_A 48 ASKKGLKAGDEILEINN 64 (94)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999973
No 399
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=25.37 E-value=45 Score=20.53 Aligned_cols=17 Identities=29% Similarity=0.251 Sum_probs=14.4
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 37 A~~aGl~~GD~I~~vng 53 (91)
T 2f5y_A 37 AERAGLQQLDTVLQLNE 53 (91)
T ss_dssp HHHHTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 45679999999999984
No 400
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=25.20 E-value=67 Score=28.06 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=28.9
Q ss_pred eEEEEcCCHH----HHHHHHHHHHHhchHHHHHHHHhccccCcEEEEEcccCCC
Q 042963 25 DYTGITLSEE----QLKYTEMKVKEAGLQQFFGCCESLLAEHGLLLLQFSSVPD 74 (171)
Q Consensus 25 ~VtgId~S~~----~~~~A~~~~~~~gl~~~~~~~~r~LkpgG~l~i~~i~~~~ 74 (171)
..+-|++-.. ..+...+++-+. ...-....+.|||||.+++...+..+
T Consensus 223 Dlvfvn~~t~yr~HHyqQCeDHa~~l--~ml~~~al~~l~pGGt~v~~~YGyAD 274 (670)
T 4gua_A 223 DLVFINIGTKYRNHHFQQCEDHAATL--KTLSRSALNCLNPGGTLVVKSYGYAD 274 (670)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHH--HHHHHHHHHTEEEEEEEEEEESCCCS
T ss_pred cEEEEecCCCcccchHHHHHHHHHHH--HHHhHHHHhhcCCCceEEEEEeeccc
Confidence 5555665533 334444443221 13445677999999999997766644
No 401
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=24.96 E-value=51 Score=20.21 Aligned_cols=17 Identities=6% Similarity=0.005 Sum_probs=14.5
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.||.|.-
T Consensus 40 A~~aGl~~GD~I~~ing 56 (91)
T 2vsp_A 40 ADLAGLEDEDVIIEVNG 56 (91)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999974
No 402
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=24.67 E-value=50 Score=21.10 Aligned_cols=18 Identities=22% Similarity=0.241 Sum_probs=15.0
Q ss_pred HHHHcCCCCCCeEEEeCC
Q 042963 7 LIEKARVSKGHDVLFLRL 24 (171)
Q Consensus 7 ll~~l~l~~g~rVLDIGc 24 (171)
..+++++++|+.|+.|.-
T Consensus 49 ~A~~aGl~~GDvI~~ing 66 (105)
T 2i4s_A 49 LFESIGLQDGDMAVALNG 66 (105)
T ss_dssp HHHHHTCCTTCEEEEETT
T ss_pred HHHHcCCCCCCEEEEECC
Confidence 356789999999999974
No 403
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=24.62 E-value=87 Score=20.57 Aligned_cols=26 Identities=12% Similarity=0.161 Sum_probs=20.6
Q ss_pred CCeEEEeCC----------------eEEEEcCCHHHHHHHHH
Q 042963 16 GHDVLFLRL----------------DYTGITLSEEQLKYTEM 41 (171)
Q Consensus 16 g~rVLDIGc----------------~VtgId~S~~~~~~A~~ 41 (171)
.++|+=+|| +|+++|.+++.++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~ 47 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED 47 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 467888885 89999999987776553
No 404
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=24.62 E-value=53 Score=19.91 Aligned_cols=17 Identities=29% Similarity=0.223 Sum_probs=14.4
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 40 A~~aGl~~GD~I~~ing 56 (88)
T 2uzc_A 40 AAQANVRIGDVVLSIDG 56 (88)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999974
No 405
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=24.62 E-value=48 Score=19.91 Aligned_cols=17 Identities=18% Similarity=0.253 Sum_probs=14.3
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 38 A~~aGl~~GD~I~~vng 54 (85)
T 1rgw_A 38 AAQSQLSQGDLVVAIDG 54 (85)
T ss_dssp HHHSSCCCCSBEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 45689999999999974
No 406
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=24.59 E-value=53 Score=20.01 Aligned_cols=17 Identities=6% Similarity=0.184 Sum_probs=14.5
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 41 A~~aGl~~GD~I~~ing 57 (90)
T 2eaq_A 41 AEFSQLQVDDEIIAINN 57 (90)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999974
No 407
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=24.27 E-value=1.8e+02 Score=25.94 Aligned_cols=46 Identities=13% Similarity=0.103 Sum_probs=36.0
Q ss_pred eEEEEcCCHHHHHHHHHHHHHh---chH-----------------------------------------HHHHHHHhccc
Q 042963 25 DYTGITLSEEQLKYTEMKVKEA---GLQ-----------------------------------------QFFGCCESLLA 60 (171)
Q Consensus 25 ~VtgId~S~~~~~~A~~~~~~~---gl~-----------------------------------------~~~~~~~r~Lk 60 (171)
.|+-+|++++.++.+++.+... ... ++|+++..+++
T Consensus 341 ~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~ 420 (742)
T 3zwc_A 341 SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCK 420 (742)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCSEEEECCCSCHHHHHHHHHHHHHHSC
T ss_pred chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCCEEEEeccccHHHHHHHHHHHhhcCC
Confidence 9999999999999988765421 000 88999999999
Q ss_pred cCcEEEEEcc
Q 042963 61 EHGLLLLQFS 70 (171)
Q Consensus 61 pgG~l~i~~i 70 (171)
|+-.+.-.+-
T Consensus 421 ~~aIlASNTS 430 (742)
T 3zwc_A 421 PGAFLCTNTS 430 (742)
T ss_dssp TTCEEEECCS
T ss_pred CCceEEecCC
Confidence 9998876543
No 408
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=23.99 E-value=55 Score=19.97 Aligned_cols=17 Identities=24% Similarity=0.214 Sum_probs=14.4
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 40 A~~aGL~~GD~I~~ing 56 (91)
T 1g9o_A 40 AEKAGLLAGDRLVEVNG 56 (91)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHCCCCCCCEEEEECC
Confidence 46788999999999973
No 409
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=23.90 E-value=49 Score=20.65 Aligned_cols=17 Identities=24% Similarity=0.384 Sum_probs=14.3
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++|+.|.-
T Consensus 44 A~~aGL~~GD~Il~Ing 60 (90)
T 1y7n_A 44 AERGGVRVGHRIIEING 60 (90)
T ss_dssp HHHHTCCSSCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999873
No 410
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=23.39 E-value=52 Score=20.10 Aligned_cols=17 Identities=0% Similarity=0.016 Sum_probs=14.3
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 41 A~~aGl~~GD~I~~ing 57 (90)
T 2he4_A 41 AARSGLRAQDRLIEVNG 57 (90)
T ss_dssp HHHHTCCTTCEEEEETT
T ss_pred HHHCCCCCCCEEEEECC
Confidence 46778999999999974
No 411
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.25 E-value=58 Score=20.14 Aligned_cols=17 Identities=12% Similarity=0.024 Sum_probs=14.3
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 45 A~~aGl~~GD~I~~ing 61 (94)
T 2eeg_A 45 AALAALCPGDLIQAING 61 (94)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999973
No 412
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=22.94 E-value=53 Score=20.32 Aligned_cols=17 Identities=18% Similarity=0.198 Sum_probs=14.2
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 43 A~~aGL~~GD~I~~ing 59 (94)
T 1vb7_A 43 AEAADLRPGDIIVAING 59 (94)
T ss_dssp HHHHTCCTTCEEEEETT
T ss_pred HHHCCCCCCCEEEEECC
Confidence 35678999999999984
No 413
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=22.81 E-value=1.4e+02 Score=22.29 Aligned_cols=53 Identities=9% Similarity=0.078 Sum_probs=28.2
Q ss_pred CCCCCe-EEEeCC----------eEEEEc-CCHHHHHHHHHHH--HHhchH---------HHHHHHHhccccCcEE
Q 042963 13 VSKGHD-VLFLRL----------DYTGIT-LSEEQLKYTEMKV--KEAGLQ---------QFFGCCESLLAEHGLL 65 (171)
Q Consensus 13 l~~g~r-VLDIGc----------~VtgId-~S~~~~~~A~~~~--~~~gl~---------~~~~~~~r~LkpgG~l 65 (171)
+++|+- ++|+|| +...+. .++++.+.-+... ....+. ++.+.+.+.++..|.-
T Consensus 98 l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~ 173 (262)
T 1o0x_A 98 FKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGFN 173 (262)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTCE
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc
Confidence 566655 479996 223333 6777765544322 122221 5566666666666653
No 414
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=22.70 E-value=1.5e+02 Score=23.13 Aligned_cols=28 Identities=14% Similarity=0.108 Sum_probs=17.2
Q ss_pred CCCCCeE-EEeCC----------eEEEE-cCCHHHHHHHH
Q 042963 13 VSKGHDV-LFLRL----------DYTGI-TLSEEQLKYTE 40 (171)
Q Consensus 13 l~~g~rV-LDIGc----------~VtgI-d~S~~~~~~A~ 40 (171)
+++|+-| +|+|| +...+ +.++++.+.-+
T Consensus 206 l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~ 245 (356)
T 3q6d_A 206 IETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYN 245 (356)
T ss_dssp CCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHH
T ss_pred cCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHH
Confidence 5677665 59995 23333 67887765443
No 415
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=22.59 E-value=86 Score=16.43 Aligned_cols=29 Identities=34% Similarity=0.385 Sum_probs=23.0
Q ss_pred EEEEcCCHHHHHHHHHHHHHhchH--HHHHH
Q 042963 26 YTGITLSEEQLKYTEMKVKEAGLQ--QFFGC 54 (171)
Q Consensus 26 VtgId~S~~~~~~A~~~~~~~gl~--~~~~~ 54 (171)
-+.|.+++++.+...+.++..|.+ .++++
T Consensus 4 ritv~l~~~l~~~Ld~~a~~~g~srS~~ir~ 34 (45)
T 2cpg_A 4 RLTITLSESVLENLEKMAREMGLSKSAMISV 34 (45)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred eEEEecCHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 468899999999999999888865 44443
No 416
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=22.16 E-value=61 Score=21.16 Aligned_cols=17 Identities=18% Similarity=0.292 Sum_probs=14.6
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++|+.|.-
T Consensus 57 A~~AGL~~GD~Il~VnG 73 (109)
T 2vsv_A 57 ASVAGAREGDYIVSIQL 73 (109)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999974
No 417
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=21.80 E-value=64 Score=20.01 Aligned_cols=17 Identities=12% Similarity=0.133 Sum_probs=14.4
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++|+.|.-
T Consensus 50 A~~aGL~~GD~I~~ing 66 (96)
T 2ego_A 50 AQLAGLTPGDTIASVNG 66 (96)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999973
No 418
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=21.70 E-value=1.7e+02 Score=21.78 Aligned_cols=28 Identities=11% Similarity=-0.040 Sum_probs=16.6
Q ss_pred CCCCCe-EEEeCC----------eEEEE-cCCHHHHHHHH
Q 042963 13 VSKGHD-VLFLRL----------DYTGI-TLSEEQLKYTE 40 (171)
Q Consensus 13 l~~g~r-VLDIGc----------~VtgI-d~S~~~~~~A~ 40 (171)
+++|+- ++|+|| +...+ ..++++.+..+
T Consensus 85 l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~ 124 (264)
T 3tb5_A 85 LKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLME 124 (264)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHH
T ss_pred ccCCCEEEEeccceecceeeecccccccCCccHHHHHHHH
Confidence 566665 589996 22333 66777665433
No 419
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=21.44 E-value=66 Score=20.17 Aligned_cols=17 Identities=12% Similarity=0.225 Sum_probs=14.8
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 15 A~~aGl~~GD~I~~ing 31 (95)
T 3id1_A 15 AAEAQIAPGTELKAVDG 31 (95)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999985
No 420
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.30 E-value=50 Score=21.74 Aligned_cols=16 Identities=19% Similarity=0.391 Sum_probs=13.9
Q ss_pred HHHcCCCCCCeEEEeC
Q 042963 8 IEKARVSKGHDVLFLR 23 (171)
Q Consensus 8 l~~l~l~~g~rVLDIG 23 (171)
.+++++++|++||.|.
T Consensus 57 A~~aGL~~GD~Il~In 72 (114)
T 2d8i_A 57 ASKKGLKAGDEILEIN 72 (114)
T ss_dssp HHHHTCCTTCCEEEES
T ss_pred HHHcCCCCCCEEEEEC
Confidence 4578999999999997
No 421
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=21.27 E-value=63 Score=25.69 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=27.7
Q ss_pred HHHHcCCCCCCeEEEe--C----------------CeEEEEcCCHHHHHHHHHH
Q 042963 7 LIEKARVSKGHDVLFL--R----------------LDYTGITLSEEQLKYTEMK 42 (171)
Q Consensus 7 ll~~l~l~~g~rVLDI--G----------------c~VtgId~S~~~~~~A~~~ 42 (171)
+++.+. ++|++||=+ | |+|++++.|++..+.+++.
T Consensus 163 ~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~l 215 (379)
T 3iup_A 163 MVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQ 215 (379)
T ss_dssp HHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHT
T ss_pred HHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC
Confidence 344445 899999998 5 3999999999999888753
No 422
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=21.17 E-value=1.7e+02 Score=21.84 Aligned_cols=52 Identities=8% Similarity=0.091 Sum_probs=26.5
Q ss_pred CCCCCeE-EEeCC----------eEEEE-cCCHHHHHHHHHHH--HHhchH---------HHHHHHHhccccCcE
Q 042963 13 VSKGHDV-LFLRL----------DYTGI-TLSEEQLKYTEMKV--KEAGLQ---------QFFGCCESLLAEHGL 64 (171)
Q Consensus 13 l~~g~rV-LDIGc----------~VtgI-d~S~~~~~~A~~~~--~~~gl~---------~~~~~~~r~LkpgG~ 64 (171)
+++|+-| +|+|| +..-+ +.++++.+..+... ....+. ++.+.+.+.++..|.
T Consensus 87 l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~ 161 (263)
T 2gg2_A 87 LKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGF 161 (263)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 5666554 79996 22333 36777765443322 111121 555555555655554
No 423
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=21.04 E-value=47 Score=19.92 Aligned_cols=16 Identities=13% Similarity=0.245 Sum_probs=13.3
Q ss_pred HHcCCCCCCeEEEeCC
Q 042963 9 EKARVSKGHDVLFLRL 24 (171)
Q Consensus 9 ~~l~l~~g~rVLDIGc 24 (171)
+++++++|++|+.|.-
T Consensus 37 ~~aGl~~GD~I~~ing 52 (83)
T 2kv8_A 37 DFVGLRAGDQILAVNE 52 (83)
T ss_dssp TTTTCCTTCEEEEETT
T ss_pred HHcCCCCCCEEEEECC
Confidence 4568999999999974
No 424
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=20.98 E-value=48 Score=20.40 Aligned_cols=17 Identities=18% Similarity=0.079 Sum_probs=14.3
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.++++|++|++||.|.-
T Consensus 42 A~~aGl~~GD~I~~ing 58 (95)
T 3r68_A 42 AEAAGLKNNDLVVAVNG 58 (95)
T ss_dssp HHHHTCCTTEEEEEETT
T ss_pred HHHCCCCCCCEEEEECC
Confidence 46789999999999973
No 425
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=20.96 E-value=66 Score=20.47 Aligned_cols=17 Identities=12% Similarity=0.005 Sum_probs=14.5
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++||.|.-
T Consensus 58 A~~aGl~~GD~I~~vng 74 (109)
T 1q3o_A 58 AWRAGLRMGDFLIEVNG 74 (109)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999984
No 426
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=20.96 E-value=55 Score=20.60 Aligned_cols=17 Identities=29% Similarity=0.251 Sum_probs=14.3
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.++++|++|++|+.|.-
T Consensus 49 A~~aGL~~GD~I~~vng 65 (100)
T 1whd_A 49 AERAGLQQLDTVLQLNE 65 (100)
T ss_dssp HHHHTCCSSCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 45679999999999974
No 427
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=20.95 E-value=61 Score=20.11 Aligned_cols=17 Identities=6% Similarity=0.032 Sum_probs=14.4
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 46 A~~aGl~~GD~I~~ing 62 (98)
T 2jxo_A 46 AEASGLRAQDRIVEVNG 62 (98)
T ss_dssp HHHHTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999974
No 428
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=20.88 E-value=62 Score=19.97 Aligned_cols=17 Identities=24% Similarity=0.235 Sum_probs=14.4
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 47 A~~aGl~~GD~I~~ing 63 (97)
T 2w4f_A 47 AARAGVRVGDKLLEVNG 63 (97)
T ss_dssp HHHHTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46778999999999984
No 429
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=20.84 E-value=63 Score=19.62 Aligned_cols=17 Identities=6% Similarity=0.218 Sum_probs=14.2
Q ss_pred HHHcC-CCCCCeEEEeCC
Q 042963 8 IEKAR-VSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~-l~~g~rVLDIGc 24 (171)
.++++ +++|++|+.|.-
T Consensus 40 A~~aG~L~~GD~I~~ing 57 (90)
T 2q9v_A 40 ADTDGRLRSGDELISVDG 57 (90)
T ss_dssp HHHHCCCCTTCEEEEETT
T ss_pred HHHCCCCCCCCEEEEECC
Confidence 45678 999999999974
No 430
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=20.78 E-value=54 Score=20.27 Aligned_cols=17 Identities=18% Similarity=0.221 Sum_probs=14.5
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|+.|+.|.-
T Consensus 43 A~~aGl~~GD~I~~ing 59 (96)
T 2v90_A 43 AKKAGMQAGDRLVAVAG 59 (96)
T ss_dssp HHHTTCCTTEEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999984
No 431
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=20.75 E-value=32 Score=26.08 Aligned_cols=54 Identities=17% Similarity=0.168 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCCCCeEEEeCC---eE----EEEcCCHHHHHHHHHHHHHhchHHHHHHHHhccccCcEE-EEEc
Q 042963 3 KVSFLIEKARVSKGHDVLFLRL---DY----TGITLSEEQLKYTEMKVKEAGLQQFFGCCESLLAEHGLL-LLQF 69 (171)
Q Consensus 3 k~~~ll~~l~l~~g~rVLDIGc---~V----tgId~S~~~~~~A~~~~~~~gl~~~~~~~~r~LkpgG~l-~i~~ 69 (171)
-++.+++...+++| .++=||| +| +|-.-|.+. |+ .+++.+..+|++-|.. .+|+
T Consensus 50 ~l~Ell~~a~l~~G-~ifVvGcSTSEV~G~~IGt~ss~ev---a~---------aI~~~l~~~~~~~Gi~LA~Qc 111 (235)
T 1v8d_A 50 AAEEFLQAFPMAPG-SLFVLGGSTSEVLGERVGTRPSLEA---AH---------AVLEGLLPPLLERGVHVAVQA 111 (235)
T ss_dssp HHHHHHHHSCCCTT-CEEEEEECHHHHHC----CCCCHHH---HH---------HHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHhcCCCCC-CEEEEeeeHHHhCCccCCCCCcHHH---HH---------HHHHHHHHHHHhcCcEEEEEc
Confidence 46788999999999 5777888 22 332222222 21 6678888888887764 4655
No 432
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=20.63 E-value=60 Score=19.49 Aligned_cols=17 Identities=6% Similarity=0.042 Sum_probs=14.2
Q ss_pred HHHcC-CCCCCeEEEeCC
Q 042963 8 IEKAR-VSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~-l~~g~rVLDIGc 24 (171)
.++++ +++|++|+.|.-
T Consensus 38 A~~aG~l~~GD~I~~vng 55 (85)
T 2i04_A 38 AALDGKMETGDVIVSVND 55 (85)
T ss_dssp HHHHCCCCTTCEEEEETT
T ss_pred HHHcCCCCCCCEEEEECC
Confidence 35678 999999999984
No 433
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=20.59 E-value=69 Score=20.20 Aligned_cols=17 Identities=35% Similarity=0.339 Sum_probs=14.5
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++|+.|.-
T Consensus 39 A~~aGl~~GD~I~~ing 55 (106)
T 3ngh_A 39 AEKAGLLDGDRVLRING 55 (106)
T ss_dssp HHHTTCCTTCEEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999973
No 434
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=20.50 E-value=1.4e+02 Score=24.39 Aligned_cols=28 Identities=25% Similarity=0.123 Sum_probs=16.9
Q ss_pred CCCCCeE-EEeCC----------eEEEE--cCCHHHHHHHH
Q 042963 13 VSKGHDV-LFLRL----------DYTGI--TLSEEQLKYTE 40 (171)
Q Consensus 13 l~~g~rV-LDIGc----------~VtgI--d~S~~~~~~A~ 40 (171)
+++|+-| +|+|| +..-+ +.|++|.+.-+
T Consensus 247 l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~ 287 (427)
T 3ig4_A 247 IQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYN 287 (427)
T ss_dssp ECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHH
T ss_pred CCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHH
Confidence 4566654 69996 33334 67888765443
No 435
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=20.34 E-value=64 Score=20.29 Aligned_cols=17 Identities=29% Similarity=0.233 Sum_probs=14.6
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++|+.|.-
T Consensus 42 A~~aGL~~GD~I~~ing 58 (103)
T 1wf7_A 42 ASQAHVRIGDVVLSIDG 58 (103)
T ss_dssp HHHTTCCTTCBEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999974
No 436
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=20.21 E-value=1.7e+02 Score=22.24 Aligned_cols=28 Identities=11% Similarity=-0.006 Sum_probs=16.8
Q ss_pred CCCCCe-EEEeCC----------eEEEE-cCCHHHHHHHH
Q 042963 13 VSKGHD-VLFLRL----------DYTGI-TLSEEQLKYTE 40 (171)
Q Consensus 13 l~~g~r-VLDIGc----------~VtgI-d~S~~~~~~A~ 40 (171)
+++|+- ++|+|| +..-+ +.+++|.+..+
T Consensus 116 l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~ 155 (286)
T 3tav_A 116 LADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSE 155 (286)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHH
T ss_pred cCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHH
Confidence 566665 579996 22222 47877765544
No 437
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=20.20 E-value=73 Score=17.87 Aligned_cols=14 Identities=21% Similarity=0.264 Sum_probs=11.6
Q ss_pred HHHHHcCCCCCCeE
Q 042963 6 FLIEKARVSKGHDV 19 (171)
Q Consensus 6 ~ll~~l~l~~g~rV 19 (171)
.+.+.+++++|+.|
T Consensus 19 ~ir~~lgi~~Gd~v 32 (53)
T 2l66_A 19 KVRQKFQIKEGDLV 32 (53)
T ss_dssp HHHHHSCCCTTCEE
T ss_pred HHHHHcCcCCCCEE
Confidence 56788999999876
No 438
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=20.18 E-value=52 Score=21.59 Aligned_cols=17 Identities=18% Similarity=0.219 Sum_probs=14.5
Q ss_pred HHHcCCCCCCeEEEeCC
Q 042963 8 IEKARVSKGHDVLFLRL 24 (171)
Q Consensus 8 l~~l~l~~g~rVLDIGc 24 (171)
.+++++++|++|+.|.-
T Consensus 52 A~~AGL~~GD~I~~Ing 68 (101)
T 3qik_A 52 AEVAGLQVGRKIYSINE 68 (101)
T ss_dssp HHHHTCCTTCBEEEETT
T ss_pred HHHcCCCCCCEEEEECC
Confidence 46789999999999963
No 439
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=20.04 E-value=1.6e+02 Score=18.78 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=19.0
Q ss_pred CCeEEEeCC----------------eEEEEcCCHHHHHHHH
Q 042963 16 GHDVLFLRL----------------DYTGITLSEEQLKYTE 40 (171)
Q Consensus 16 g~rVLDIGc----------------~VtgId~S~~~~~~A~ 40 (171)
+++|+=+|+ +|+.+|.+++.++..+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~ 44 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKAS 44 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 477888885 8999999988766544
No 440
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=20.01 E-value=1.9e+02 Score=21.98 Aligned_cols=52 Identities=10% Similarity=0.054 Sum_probs=27.3
Q ss_pred CCCCCe-EEEeCC----------eEEEE-cCCHHHHHHHHHHH--HHhchH---------HHHHHHHhccccCcE
Q 042963 13 VSKGHD-VLFLRL----------DYTGI-TLSEEQLKYTEMKV--KEAGLQ---------QFFGCCESLLAEHGL 64 (171)
Q Consensus 13 l~~g~r-VLDIGc----------~VtgI-d~S~~~~~~A~~~~--~~~gl~---------~~~~~~~r~LkpgG~ 64 (171)
+++|+- ++|+|| +..-+ +.+++|.+..+... ....+. ++.+.+.++++..|.
T Consensus 122 l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~ 196 (285)
T 3pka_A 122 ITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGY 196 (285)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTC
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCC
Confidence 566665 469996 22223 47777765443322 112221 555566666666554
Done!