BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042966
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39079|DNJ13_ARATH Chaperone protein dnaJ 13 OS=Arabidopsis thaliana GN=ATJ13 PE=1
SV=2
Length = 538
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 127/140 (90%)
Query: 4 AKDGPPNRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEA 63
A GPPNRELYALL+LSPEASDEEIRKAYRQWAQVYHPDK Q+P MKE+ATENFQRICEA
Sbjct: 7 APTGPPNRELYALLNLSPEASDEEIRKAYRQWAQVYHPDKIQSPQMKEVATENFQRICEA 66
Query: 64 YEILSDENKRLIYDIYGMEGLTSGLELGPKLNKVEELKEELERLRQRKEQEKALAHFRPS 123
YEILSDE KRLIYD+YGMEGL SGLELGP+L+K +E+KEELER+++R E+ K +AHF+P+
Sbjct: 67 YEILSDETKRLIYDLYGMEGLNSGLELGPRLSKADEIKEELERIKRRNEEAKKMAHFQPT 126
Query: 124 GTILASLSLPQFLEGDGIMR 143
G+IL +LS+P FL GDGIMR
Sbjct: 127 GSILFNLSVPHFLVGDGIMR 146
>sp|Q5RC70|DJC11_PONAB DnaJ homolog subfamily C member 11 OS=Pongo abelii GN=DNAJC11
PE=2 SV=1
Length = 559
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
N + Y+LL++ EAS EE++ AYR+ +YHPDK++ P +K A F + +AYE+LSD
Sbjct: 12 NEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSD 71
Query: 70 ENKRLIYDIYGMEGL 84
R IYDIYG GL
Sbjct: 72 PQTRAIYDIYGKRGL 86
>sp|Q9NVH1|DJC11_HUMAN DnaJ homolog subfamily C member 11 OS=Homo sapiens GN=DNAJC11
PE=1 SV=2
Length = 559
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
N + Y+LL++ EAS EE++ AYR+ +YHPDK++ P +K A F + +AYE+LSD
Sbjct: 12 NEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSD 71
Query: 70 ENKRLIYDIYGMEGL 84
R IYDIYG GL
Sbjct: 72 PQTRAIYDIYGKRGL 86
>sp|Q5U458|DJC11_MOUSE DnaJ homolog subfamily C member 11 OS=Mus musculus GN=Dnajc11
PE=2 SV=2
Length = 559
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
N + Y+LL++ EAS EE++ AYR+ +YHPDK++ P +K A F + +AYE+LSD
Sbjct: 12 NEDYYSLLNVRREASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSD 71
Query: 70 ENKRLIYDIYGMEGL 84
R IYDIYG GL
Sbjct: 72 PQTRAIYDIYGKRGL 86
>sp|Q54PV9|DJC11_DICDI DnaJ homolog subfamily C member 11 homolog OS=Dictyostelium
discoideum GN=dnajc11 PE=3 SV=1
Length = 575
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 72/120 (60%)
Query: 12 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDEN 71
+ Y++L++S A+D+EI+ A+++ A YHPDK +K+ + F I A + LSD
Sbjct: 35 DFYSILNISRNATDDEIKIAFKKLAFTYHPDKQTNEELKKETQDIFTLITLAKDTLSDPK 94
Query: 72 KRLIYDIYGMEGLTSGLELGPKLNKVEELKEELERLRQRKEQEKALAHFRPSGTILASLS 131
R IYD +G+EG+ + K +V++L + L+R+++ E++K + F +G+ SL+
Sbjct: 95 LRAIYDQFGLEGIEHSKAIVNKYKEVDKLLQALDRIQKENEEDKLIQSFSATGSQSISLA 154
>sp|Q24133|DNAJ1_DROME DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1
SV=3
Length = 334
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
++ Y +L L +ASD+EI+KAYR+ A YHPDK ++P A E F+ I EAYE+LSD+
Sbjct: 3 KDFYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQ----AEERFKEIAEAYEVLSDK 58
Query: 71 NKRLIYDIYGMEGL 84
KR I+D YG +GL
Sbjct: 59 KKRDIFDNYGEDGL 72
>sp|Q2NL21|DJC11_BOVIN DnaJ homolog subfamily C member 11 OS=Bos taurus GN=DNAJC11 PE=2
SV=1
Length = 559
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
N + Y+LL++ EAS EE++ AYR+ +YHPDK++ P +K A F + +AYE+LSD
Sbjct: 12 NEDYYSLLNVRREASCEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSD 71
Query: 70 ENKRLIYDIYGMEGL 84
R IYDIYG GL
Sbjct: 72 PQTRAIYDIYGKRGL 86
>sp|P25686|DNJB2_HUMAN DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=1
SV=3
Length = 324
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 14 YALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKR 73
Y +L + AS ++I+KAYR+ A +HPDK P KE A + F+ + EAYE+LSD++KR
Sbjct: 5 YEILDVPRSASADDIKKAYRRKALQWHPDKN--PDNKEFAEKKFKEVAEAYEVLSDKHKR 62
Query: 74 LIYDIYGMEGLTSGLELGP 92
IYD YG EGLT G GP
Sbjct: 63 EIYDRYGREGLT-GTGTGP 80
>sp|Q9Y7T0|YCJ3_SCHPO Uncharacterized J domain-containing protein C63.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC63.03 PE=3 SV=2
Length = 612
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 12 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDEN 71
ELY L L +A+ ++I+++Y + ++++HPD++ A K A E FQ I AYE+LSD +
Sbjct: 8 ELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQ-KAAAEEKFQIIQHAYEVLSDPS 66
Query: 72 KRLIYDIYGMEGLTSGLELGPKLNKVEELKEEL-ERLRQRKEQE-KALAHFRPSGTILAS 129
K+ IYD +G +GL + +G EELK ++ E++++R E +L R TI+ +
Sbjct: 67 KKEIYDNFGEQGLKTDWNVGFPGKSAEELKNKIREQIQERDIHEIDSLVQSRSETTIVVN 126
Query: 130 LS 131
++
Sbjct: 127 MT 128
>sp|Q9QYI5|DNJB2_MOUSE DnaJ homolog subfamily B member 2 OS=Mus musculus GN=Dnajb2 PE=2
SV=2
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 14 YALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDENKR 73
Y +L + AS ++I+KAYR+ A +HPDK P KE A + F+ + EAYE+LSD++KR
Sbjct: 5 YEILDVPRSASPDDIKKAYRKKALQWHPDK--NPDNKEFAEKKFKEVAEAYEVLSDKHKR 62
Query: 74 LIYDIYGMEGLTSGLELGP 92
IYD YG EGLT G GP
Sbjct: 63 EIYDRYGREGLT-GAGSGP 80
>sp|A9BNG6|DNAJ_DELAS Chaperone protein DnaJ OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=dnaJ PE=3 SV=1
Length = 380
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L ++ ASD++I+KAYR+ A YHPD+ Q +E A E F+ EAYE+LSD
Sbjct: 4 RDFYEVLGVAKNASDDDIKKAYRKLAMKYHPDRNQGDAARE-AEEKFKEAKEAYEMLSDS 62
Query: 71 NKRLIYDIYGMEGL 84
NKR YD YG G+
Sbjct: 63 NKRAAYDQYGHAGV 76
>sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1
SV=1
Length = 337
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
++ Y +L + ASDE+I+KAYR+ A +HPDK ++P A E F+ + EAYE+LSD
Sbjct: 2 GKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQ----AEEKFKEVAEAYEVLSD 57
Query: 70 ENKRLIYDIYGMEGL 84
KR IYD +G EGL
Sbjct: 58 PKKREIYDQFGEEGL 72
>sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2
SV=1
Length = 337
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
++ Y +L + ASDE+I+KAYR+ A +HPDK ++P A E F+ + EAYE+LSD
Sbjct: 2 GKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQ----AEEKFKEVAEAYEVLSD 57
Query: 70 ENKRLIYDIYGMEGL 84
KR IYD +G EGL
Sbjct: 58 PKKREIYDQFGEEGL 72
>sp|Q2KIT4|DNJB4_BOVIN DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2
SV=1
Length = 337
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
++ Y +L + ASDE+I+KAYR+ A +HPDK ++P A E F+ + EAYE+LSD
Sbjct: 2 GKDYYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSPQ----AEERFKEVAEAYEVLSD 57
Query: 70 ENKRLIYDIYGMEGL 84
KR IYD +G EGL
Sbjct: 58 PKKREIYDQFGEEGL 72
>sp|Q54ED3|DNJA1_DICDI DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium
discoideum GN=dnaja1 PE=3 SV=1
Length = 459
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
+E Y L + P+ +++E++KAYR+ A YHPDK Q P K+ A F+ I EAYE+LSD
Sbjct: 5 KEYYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPG-KDAAEAKFKDISEAYEVLSDP 63
Query: 71 NKRLIYDIYGMEGL 84
KR +YD YG EG+
Sbjct: 64 EKRKMYDSYGSEGM 77
>sp|Q5FWN8|DNJ6A_XENLA DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-a
PE=2 SV=1
Length = 250
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 12 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDEN 71
E Y +L + AS ++I+KAYR+ A +HPDK P K+ A F+ + EAYE+LSD
Sbjct: 3 EYYEVLGVQRNASADDIKKAYRRLALKWHPDK--NPDNKDEAERRFKEVAEAYEVLSDSK 60
Query: 72 KRLIYDIYGMEGLTS 86
KR IYD YG EGLT+
Sbjct: 61 KRDIYDKYGKEGLTN 75
>sp|Q5HNW7|DNAJ_STAEQ Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=dnaJ PE=3 SV=1
Length = 373
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 4/73 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L ++ AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSDE
Sbjct: 4 RDYYEVLGVNKSASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDE 59
Query: 71 NKRLIYDIYGMEG 83
NKR+ YD +G +G
Sbjct: 60 NKRVNYDQFGHDG 72
>sp|Q9D832|DNJB4_MOUSE DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2
SV=1
Length = 337
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
++ Y +L + A+DE+++KAYR+ A +HPDK ++P A E F+ + EAYE+LSD
Sbjct: 2 GKDYYHILGIDKGATDEDVKKAYRKQALKFHPDKNKSPQ----AEEKFKEVAEAYEVLSD 57
Query: 70 ENKRLIYDIYGMEGL 84
KR IYD +G EGL
Sbjct: 58 PKKREIYDQFGEEGL 72
>sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2
SV=3
Length = 340
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
++ Y L L+ ASDEEI++AYR+ A YHPDK + P A E F+ I EAY++LSD
Sbjct: 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG----AEEKFKEIAEAYDVLSD 57
Query: 70 ENKRLIYDIYGMEGL 84
KR I+D YG EGL
Sbjct: 58 PRKREIFDRYGEEGL 72
>sp|O54946|DNJB6_MOUSE DnaJ homolog subfamily B member 6 OS=Mus musculus GN=Dnajb6 PE=1
SV=4
Length = 365
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 12 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDEN 71
+ Y +L + AS E+I+KAYR+ A +HPDK P KE A F+++ EAYE+LSD
Sbjct: 3 DYYEVLGVQRHASPEDIKKAYRKQALKWHPDK--NPENKEEAERKFKQVAEAYEVLSDAK 60
Query: 72 KRLIYDIYGMEGLT 85
KR IYD YG EGL
Sbjct: 61 KRDIYDKYGKEGLN 74
>sp|Q7NBW0|DNAJ_MYCGA Chaperone protein DnaJ OS=Mycoplasma gallisepticum (strain R(low
/ passage 15 / clone 2)) GN=dnaJ PE=3 SV=2
Length = 391
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S A+ ++I+KA+R+ A YHPD+ + A E F+ + EAYE+LSDE
Sbjct: 5 RDYYEILEVSRSATQQDIKKAFRKLAMKYHPDRNKDSD----AEEKFKEVNEAYEVLSDE 60
Query: 71 NKRLIYDIYGMEGLT-SGLELG 91
KR +YD YG EGL SG G
Sbjct: 61 EKRKLYDTYGHEGLNASGFHQG 82
>sp|Q7M9T3|DNAJ_WOLSU Chaperone protein DnaJ OS=Wolinella succinogenes (strain ATCC
29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)
GN=dnaJ PE=3 SV=1
Length = 374
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 12 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDEN 71
+ Y +L + AS EEI+KAYR+ A YHPD+ + A E F+R+ EAY++LSDE
Sbjct: 5 DYYEILEIERSASGEEIKKAYRKMAMKYHPDRNEGSSE---AEEMFKRVNEAYQVLSDEG 61
Query: 72 KRLIYDIYGMEGLTS 86
KR +YD YG +GL S
Sbjct: 62 KRQLYDRYGKQGLES 76
>sp|B9DNJ9|DNAJ_STACT Chaperone protein DnaJ OS=Staphylococcus carnosus (strain TM300)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD Q +E A E F+ I EAYE+LSDE
Sbjct: 4 RDYYEVLGVSKDASKDEIKKAYRKLSKKYHPDINQ----EEGAEEKFKEISEAYEVLSDE 59
Query: 71 NKRLIYDIYG 80
NKR YD +G
Sbjct: 60 NKRANYDQFG 69
>sp|Q6AYU3|DNJB6_RAT DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6
PE=1 SV=1
Length = 357
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 12 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDEN 71
+ Y +L + AS E+I+KAYR+ A +HPDK P KE A F+++ EAYE+LSD
Sbjct: 3 DYYEVLGVQRHASPEDIKKAYRKQALKWHPDK--NPENKEEAERKFKQVAEAYEVLSDAK 60
Query: 72 KRLIYDIYGMEGLT 85
KR IYD YG EGL
Sbjct: 61 KRDIYDKYGKEGLN 74
>sp|Q8CP18|DNAJ_STAES Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=dnaJ PE=3 SV=1
Length = 373
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L ++ AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSDE
Sbjct: 4 RDYYEVLGVNKSASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDE 59
Query: 71 NKRLIYDIYGMEG 83
NKR YD +G +G
Sbjct: 60 NKRANYDQFGHDG 72
>sp|Q128K1|DNAJ_POLSJ Chaperone protein DnaJ OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=dnaJ PE=3 SV=1
Length = 380
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
++ Y L + ASD++I+KAYR+ A +HPD+ Q K ++ E F+ EAYE+LSDE
Sbjct: 4 KDYYDTLGVPKNASDDDIKKAYRKLAMKHHPDRNQGDKSK-VSEEKFKEAKEAYEVLSDE 62
Query: 71 NKRLIYDIYGMEGL 84
NKR+ YD YG G+
Sbjct: 63 NKRMAYDQYGHAGV 76
>sp|A1WAR7|DNAJ_ACISJ Chaperone protein DnaJ OS=Acidovorax sp. (strain JS42) GN=dnaJ
PE=3 SV=1
Length = 376
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L + ASD+EI+KAYR+ A YHPD+ Q K A E F+ EAYEILSD
Sbjct: 4 RDFYEVLGVPKNASDDEIKKAYRKLAMKYHPDRNQGDAAKP-AEEKFKEAKEAYEILSDA 62
Query: 71 NKRLIYDIYGMEGL 84
KR YD YG G+
Sbjct: 63 QKRAAYDQYGHAGV 76
>sp|Q5F3Z5|DNJB6_CHICK DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2
SV=1
Length = 326
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 12 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDEN 71
+ Y +L + AS E+I+KAYR+ A +HPDK P KE A + F+++ EAYE+LSD
Sbjct: 3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDK--NPENKEEAEQQFKQVAEAYEVLSDAK 60
Query: 72 KRLIYDIYGMEGL 84
KR IYD +G EGL
Sbjct: 61 KRDIYDRFGKEGL 73
>sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2
SV=1
Length = 348
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
++ Y +L + A+++EI+KAYR+ A YHPDK + P+ A E F+ I EAY++LSD
Sbjct: 2 GKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN----AEEKFKEIAEAYDVLSD 57
Query: 70 ENKRLIYDIYGMEGLTS 86
KR +YD YG EGL +
Sbjct: 58 PKKRSLYDQYGEEGLKT 74
>sp|P47265|DNAJ_MYCGE Chaperone protein DnaJ OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=dnaJ PE=3 SV=1
Length = 389
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPH--MKEIATENFQRICEAYEILS 68
R+ Y +L +S AS ++I++A+R+ A YHPD+++A + ++ E F+ + EAYE+LS
Sbjct: 6 RDYYEVLGISKNASSQDIKRAFRKLAMQYHPDRHKAENETTQKQNEEKFKEVNEAYEVLS 65
Query: 69 DENKRLIYDIYGMEGLTS 86
DE KR +YD +G EGL +
Sbjct: 66 DEEKRKLYDQFGHEGLNA 83
>sp|Q5BIP8|DNJB5_BOVIN DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2
SV=1
Length = 348
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
++ Y +L + A+++EI+KAYR+ A YHPDK + P+ A E F+ I EAY++LSD
Sbjct: 2 GKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN----AEEKFKEIAEAYDVLSD 57
Query: 70 ENKRLIYDIYGMEGLTS 86
KR +YD YG EGL +
Sbjct: 58 PKKRGLYDQYGEEGLKT 74
>sp|Q2YT48|DNAJ_STAAB Chaperone protein DnaJ OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|P63972|DNAJ_STAAW Chaperone protein DnaJ OS=Staphylococcus aureus (strain MW2)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|A8Z4B8|DNAJ_STAAT Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|Q6G8Y8|DNAJ_STAAS Chaperone protein DnaJ OS=Staphylococcus aureus (strain MSSA476)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|P63971|DNAJ_STAAN Chaperone protein DnaJ OS=Staphylococcus aureus (strain N315)
GN=dnaJ PE=1 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|P63970|DNAJ_STAAM Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=dnaJ PE=1 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|A6QHC2|DNAJ_STAAE Chaperone protein DnaJ OS=Staphylococcus aureus (strain Newman)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|Q5HFI1|DNAJ_STAAC Chaperone protein DnaJ OS=Staphylococcus aureus (strain COL)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|A5ITA7|DNAJ_STAA9 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH9)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|Q2FXZ3|DNAJ_STAA8 Chaperone protein DnaJ OS=Staphylococcus aureus (strain NCTC
8325) GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|Q2FGE4|DNAJ_STAA3 Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|A6U251|DNAJ_STAA2 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH1)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|A7X2Y0|DNAJ_STAA1 Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu3 /
ATCC 700698) GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|Q6GGC1|DNAJ_STAAR Chaperone protein DnaJ OS=Staphylococcus aureus (strain MRSA252)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L +S +AS +EI+KAYR+ ++ YHPD + +E A E F+ I EAYE+LSD+
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDD 59
Query: 71 NKRLIYDIYGME 82
NKR YD +G +
Sbjct: 60 NKRASYDQFGHD 71
>sp|Q8L3D3|DNAJ_COLMA Chaperone protein DnaJ OS=Colwellia maris GN=dnaJ PE=3 SV=2
Length = 379
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y L +S +AS++EI+KAY++ A YHPD+ Q KE E F+ + EAYEIL+D+
Sbjct: 4 RDYYETLEVSQDASEKEIKKAYKKLAMKYHPDRTQGDKSKE---ETFKEVKEAYEILNDD 60
Query: 71 NKRLIYDIYG 80
KR YD YG
Sbjct: 61 QKRAAYDQYG 70
>sp|Q7VG06|DNAJ_HELHP Chaperone protein DnaJ OS=Helicobacter hepaticus (strain ATCC
51449 / 3B1) GN=dnaJ PE=3 SV=1
Length = 385
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 12 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDEN 71
+ Y +L ++ + E I+KAYR+ A YHPD+ P K+ A E F+R+ EAYE+LSD++
Sbjct: 5 DYYEILEITRTSDKETIKKAYRKMALKYHPDR--NPDDKD-AEEQFKRVNEAYEVLSDDS 61
Query: 72 KRLIYDIYGMEGL 84
KR IYD YG EGL
Sbjct: 62 KRQIYDKYGKEGL 74
>sp|O75953|DNJB5_HUMAN DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=1
SV=1
Length = 348
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 10 NRELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSD 69
++ Y +L + A+++EI+KAYR+ A YHPDK + P+ A E F+ I EAY++LSD
Sbjct: 2 GKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN----AEEKFKEIAEAYDVLSD 57
Query: 70 ENKRLIYDIYGMEGL 84
KR +YD YG EGL
Sbjct: 58 PKKRGLYDQYGEEGL 72
>sp|Q5XGU5|DNJ6B_XENLA DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-b
PE=2 SV=1
Length = 245
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 12 ELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDEN 71
E Y +L + +S ++I+KAYR+ A +HPDK P KE A F+ + EAYE+LSD
Sbjct: 3 EYYDVLGVQRNSSPDDIKKAYRRLALKWHPDK--NPDNKEEAERRFKEVAEAYEVLSDSK 60
Query: 72 KRLIYDIYGMEGLT 85
KR IYD YG EGL
Sbjct: 61 KRDIYDKYGKEGLA 74
>sp|O87778|DNAJ_LACSK Chaperone protein DnaJ OS=Lactobacillus sakei GN=dnaJ PE=2 SV=1
Length = 383
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 11 RELYALLHLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKEIATENFQRICEAYEILSDE 70
R+ Y +L + +ASD+EI+KAYR+ ++ YHPD +AP A F+ + EAYE LSD
Sbjct: 5 RDYYDVLGVGRDASDDEIKKAYRKLSKKYHPDINKAPD----AEAKFKEVTEAYEALSDP 60
Query: 71 NKRLIYDIYGMEGLT 85
KR YD YG G+
Sbjct: 61 QKRAAYDQYGHAGMN 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,160,374
Number of Sequences: 539616
Number of extensions: 2482014
Number of successful extensions: 11924
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 9960
Number of HSP's gapped (non-prelim): 1243
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)