Query 042970
Match_columns 489
No_of_seqs 149 out of 1345
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 20:07:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.4E-69 8.1E-74 538.8 39.6 432 6-482 12-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.1E-63 3.7E-68 508.4 39.2 453 1-483 1-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 7.1E-63 2.4E-67 500.6 42.0 442 5-482 4-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.2E-62 7.4E-67 493.9 38.4 439 1-483 1-453 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 6.1E-62 2.1E-66 492.0 39.1 438 5-481 7-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 4.6E-46 1.6E-50 374.2 34.8 383 5-461 10-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 5.2E-45 1.8E-49 363.8 25.5 369 1-480 13-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.8E-41 9.5E-46 338.2 30.8 384 8-487 1-405 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 1.3E-40 4.4E-45 333.7 28.7 378 6-480 19-412 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 1.8E-40 6.1E-45 332.6 27.8 386 8-485 1-404 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 9.2E-40 3.1E-44 326.0 32.4 393 5-481 2-398 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 5.3E-40 1.8E-44 327.5 26.5 376 8-483 1-384 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 2.6E-39 8.7E-44 325.8 30.8 382 1-478 1-396 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 1.5E-38 5.3E-43 320.9 25.5 382 5-482 18-435 (441)
15 2p6p_A Glycosyl transferase; X 100.0 3.4E-37 1.2E-41 305.5 28.2 356 8-477 1-375 (384)
16 4fzr_A SSFS6; structural genom 100.0 1.5E-36 5E-41 302.5 22.2 350 5-460 13-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.6E-35 5.6E-40 294.9 26.6 363 5-480 18-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.1E-34 3.9E-39 288.1 28.2 364 7-482 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.7E-32 9.3E-37 272.9 29.5 367 5-482 18-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2E-29 6.8E-34 247.0 23.4 327 7-456 2-339 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 9.4E-27 3.2E-31 202.8 14.6 162 266-460 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 9.9E-20 3.4E-24 178.4 24.6 322 8-454 7-336 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 7.3E-15 2.5E-19 136.6 15.9 118 279-411 156-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2.8E-15 9.6E-20 133.6 9.1 120 278-408 26-184 (224)
25 3okp_A GDP-mannose-dependent a 99.5 9.8E-11 3.3E-15 115.3 31.2 355 4-484 1-380 (394)
26 3c48_A Predicted glycosyltrans 99.4 4.2E-10 1.4E-14 112.6 31.1 376 5-484 18-429 (438)
27 1v4v_A UDP-N-acetylglucosamine 99.4 1.1E-10 3.8E-15 114.3 24.3 130 280-443 198-336 (376)
28 2gek_A Phosphatidylinositol ma 99.3 1.9E-10 6.6E-15 113.7 23.2 350 6-484 19-387 (406)
29 3fro_A GLGA glycogen synthase; 99.3 1.4E-09 4.9E-14 108.5 26.6 379 6-458 1-413 (439)
30 3ot5_A UDP-N-acetylglucosamine 99.3 8.6E-10 2.9E-14 108.8 23.1 353 5-481 25-393 (403)
31 2r60_A Glycosyl transferase, g 99.3 9.7E-10 3.3E-14 112.0 24.2 374 1-458 1-441 (499)
32 1vgv_A UDP-N-acetylglucosamine 99.2 1.2E-09 4.2E-14 107.1 22.4 141 279-452 204-353 (384)
33 3dzc_A UDP-N-acetylglucosamine 99.2 2.5E-09 8.7E-14 105.3 24.0 329 5-443 23-369 (396)
34 2jjm_A Glycosyl transferase, g 99.2 1.2E-08 4E-13 100.6 27.4 333 7-456 15-365 (394)
35 2x6q_A Trehalose-synthase TRET 99.2 7.1E-09 2.4E-13 102.9 24.8 93 340-456 292-394 (416)
36 3beo_A UDP-N-acetylglucosamine 99.1 7.2E-09 2.5E-13 101.2 22.6 331 4-451 5-352 (375)
37 2iw1_A Lipopolysaccharide core 99.1 9E-08 3.1E-12 93.2 30.2 147 282-458 197-354 (374)
38 2iuy_A Avigt4, glycosyltransfe 99.1 3.9E-09 1.3E-13 101.8 19.7 125 283-440 164-307 (342)
39 4hwg_A UDP-N-acetylglucosamine 99.0 2.2E-08 7.6E-13 97.8 20.1 351 7-479 9-373 (385)
40 1rzu_A Glycogen synthase 1; gl 98.7 2.2E-06 7.4E-11 86.7 22.5 141 283-452 293-454 (485)
41 2qzs_A Glycogen synthase; glyc 98.7 3.4E-06 1.1E-10 85.3 23.8 140 282-452 293-455 (485)
42 3s28_A Sucrose synthase 1; gly 98.7 4.1E-06 1.4E-10 88.9 24.6 148 282-456 573-749 (816)
43 3oy2_A Glycosyltransferase B73 98.6 1.3E-05 4.6E-10 79.0 24.9 149 281-456 184-370 (413)
44 2vsy_A XCC0866; transferase, g 98.6 5.2E-05 1.8E-09 78.2 28.7 97 341-456 434-537 (568)
45 2xci_A KDO-transferase, 3-deox 98.5 2E-05 7E-10 76.6 22.4 98 342-460 261-364 (374)
46 2f9f_A First mannosyl transfer 98.5 1.3E-06 4.6E-11 75.3 12.0 133 283-444 25-165 (177)
47 2hy7_A Glucuronosyltransferase 98.2 0.00027 9.1E-09 69.5 22.3 75 340-442 264-353 (406)
48 3qhp_A Type 1 capsular polysac 97.9 0.0001 3.5E-09 62.4 11.3 145 281-459 2-158 (166)
49 3vue_A GBSS-I, granule-bound s 97.6 0.0093 3.2E-07 60.6 22.7 136 283-440 329-476 (536)
50 3q3e_A HMW1C-like glycosyltran 97.6 0.00074 2.5E-08 68.6 14.0 149 281-455 441-602 (631)
51 2bfw_A GLGA glycogen synthase; 97.6 0.0017 5.8E-08 56.5 14.7 93 342-457 96-197 (200)
52 4gyw_A UDP-N-acetylglucosamine 97.3 0.0027 9.3E-08 67.0 15.1 149 280-453 522-680 (723)
53 1psw_A ADP-heptose LPS heptosy 97.0 0.011 3.6E-07 56.5 14.6 103 8-144 1-106 (348)
54 3tov_A Glycosyl transferase fa 97.0 0.028 9.7E-07 53.7 17.2 106 5-144 6-115 (349)
55 3rhz_A GTF3, nucleotide sugar 96.7 0.0047 1.6E-07 58.7 9.1 110 342-479 215-336 (339)
56 2x0d_A WSAF; GT4 family, trans 95.1 0.037 1.3E-06 54.2 7.4 80 340-442 294-380 (413)
57 2gt1_A Lipopolysaccharide hept 94.4 0.91 3.1E-05 42.4 14.9 44 8-51 1-46 (326)
58 2wqk_A 5'-nucleotidase SURE; S 87.6 0.88 3E-05 40.7 6.0 113 8-147 2-127 (251)
59 1ccw_A Protein (glutamate muta 87.3 1.7 5.8E-05 34.8 7.1 49 5-53 1-49 (137)
60 1uqt_A Alpha, alpha-trehalose- 86.1 5.3 0.00018 39.6 11.5 109 343-483 333-454 (482)
61 2ywr_A Phosphoribosylglycinami 85.2 12 0.00041 32.5 12.0 105 8-147 2-110 (216)
62 3q0i_A Methionyl-tRNA formyltr 84.8 10 0.00035 35.1 11.9 38 3-45 3-40 (318)
63 3auf_A Glycinamide ribonucleot 84.6 14 0.00047 32.4 12.1 107 6-147 21-131 (229)
64 2x0d_A WSAF; GT4 family, trans 83.9 0.57 1.9E-05 45.6 3.2 41 5-45 44-89 (413)
65 3zqu_A Probable aromatic acid 83.6 1.5 5.2E-05 37.9 5.3 47 5-52 2-48 (209)
66 2phj_A 5'-nucleotidase SURE; S 82.4 2.2 7.7E-05 37.9 6.0 113 8-147 2-127 (251)
67 3kcq_A Phosphoribosylglycinami 82.2 9.1 0.00031 33.2 9.8 106 2-147 3-112 (215)
68 3t5t_A Putative glycosyltransf 82.2 30 0.001 34.2 14.7 109 342-482 353-472 (496)
69 2yxb_A Coenzyme B12-dependent 81.3 3.4 0.00012 34.1 6.5 48 6-53 17-64 (161)
70 3nb0_A Glycogen [starch] synth 80.6 2.3 7.9E-05 43.8 6.1 95 345-457 497-615 (725)
71 1kjn_A MTH0777; hypotethical p 80.0 2.4 8.2E-05 33.9 4.7 50 1-51 1-52 (157)
72 4dim_A Phosphoribosylglycinami 79.0 5.1 0.00018 38.5 8.1 90 4-141 4-97 (403)
73 2bw0_A 10-FTHFDH, 10-formyltet 78.8 15 0.00053 34.1 10.9 107 5-149 20-131 (329)
74 1y80_A Predicted cobalamin bin 78.1 6.1 0.00021 34.1 7.5 50 6-55 87-136 (210)
75 1p3y_1 MRSD protein; flavoprot 78.1 1.2 4.2E-05 38.1 2.8 50 2-52 3-52 (194)
76 3fgn_A Dethiobiotin synthetase 77.0 20 0.00069 31.8 10.7 123 6-149 24-167 (251)
77 1g5t_A COB(I)alamin adenosyltr 76.9 23 0.00079 30.1 10.4 37 7-43 28-64 (196)
78 1mvl_A PPC decarboxylase athal 76.6 3.1 0.00011 36.0 4.9 44 5-50 17-60 (209)
79 3av3_A Phosphoribosylglycinami 76.6 29 0.001 29.8 11.3 105 8-147 4-112 (212)
80 2i2x_B MTAC, methyltransferase 74.4 8.1 0.00028 34.6 7.4 48 6-53 122-169 (258)
81 1jkx_A GART;, phosphoribosylgl 72.8 38 0.0013 29.1 11.0 106 8-147 1-109 (212)
82 1fmt_A Methionyl-tRNA FMet for 72.5 27 0.00092 32.2 10.6 101 6-149 2-113 (314)
83 1sbz_A Probable aromatic acid 70.6 5 0.00017 34.3 4.7 45 8-53 1-46 (197)
84 3lqk_A Dipicolinate synthase s 70.3 5 0.00017 34.4 4.7 41 5-46 5-46 (201)
85 3qjg_A Epidermin biosynthesis 69.6 5.4 0.00019 33.3 4.7 44 8-52 6-49 (175)
86 3ezx_A MMCP 1, monomethylamine 67.9 12 0.0004 32.5 6.7 48 6-53 91-138 (215)
87 3rfo_A Methionyl-tRNA formyltr 67.9 51 0.0017 30.4 11.4 36 5-45 2-37 (317)
88 3mcu_A Dipicolinate synthase, 66.9 6.1 0.00021 34.0 4.5 42 5-47 3-45 (207)
89 3tqr_A Phosphoribosylglycinami 66.2 43 0.0015 28.9 9.9 107 6-147 4-113 (215)
90 2ejb_A Probable aromatic acid 66.0 9.3 0.00032 32.3 5.5 44 8-52 2-45 (189)
91 2qs7_A Uncharacterized protein 65.9 7.3 0.00025 31.3 4.6 50 1-50 2-51 (144)
92 2ixd_A LMBE-related protein; h 65.5 29 0.001 30.5 8.9 20 104-125 85-104 (242)
93 4ds3_A Phosphoribosylglycinami 65.3 35 0.0012 29.3 9.1 108 5-147 5-116 (209)
94 3pdi_A Nitrogenase MOFE cofact 65.3 47 0.0016 32.7 11.3 36 105-145 390-425 (483)
95 3mc3_A DSRE/DSRF-like family p 65.0 9.1 0.00031 30.3 5.0 32 17-48 28-59 (134)
96 4dzz_A Plasmid partitioning pr 64.9 33 0.0011 28.7 9.1 36 9-44 2-39 (206)
97 1id1_A Putative potassium chan 63.7 5.1 0.00017 32.4 3.4 35 5-44 1-35 (153)
98 3zzm_A Bifunctional purine bio 63.0 16 0.00055 35.8 7.0 109 7-134 9-117 (523)
99 3da8_A Probable 5'-phosphoribo 62.1 33 0.0011 29.6 8.4 108 5-147 10-119 (215)
100 3tqq_A Methionyl-tRNA formyltr 60.8 58 0.002 29.9 10.3 35 7-46 2-36 (314)
101 1qgu_B Protein (nitrogenase mo 60.0 66 0.0023 32.0 11.3 96 7-145 360-465 (519)
102 3iqw_A Tail-anchored protein t 59.7 44 0.0015 31.0 9.5 41 7-47 15-56 (334)
103 3u7q_B Nitrogenase molybdenum- 59.6 98 0.0033 30.8 12.4 35 106-145 428-469 (523)
104 3tov_A Glycosyl transferase fa 59.3 71 0.0024 29.7 11.0 99 8-147 186-288 (349)
105 2hy5_B Intracellular sulfur ox 59.1 10 0.00035 30.1 4.3 43 1-44 1-45 (136)
106 1meo_A Phosophoribosylglycinam 58.8 86 0.0029 26.8 11.4 106 8-147 1-109 (209)
107 2g1u_A Hypothetical protein TM 57.2 12 0.00042 30.1 4.7 35 5-44 17-51 (155)
108 1qzu_A Hypothetical protein MD 57.2 9.4 0.00032 32.8 4.0 44 5-49 17-61 (206)
109 2bln_A Protein YFBG; transfera 56.3 69 0.0024 29.3 10.0 40 107-148 66-106 (305)
110 2r8r_A Sensor protein; KDPD, P 55.6 14 0.00047 32.3 4.8 39 7-45 6-44 (228)
111 3dfz_A SIRC, precorrin-2 dehyd 53.8 26 0.0009 30.4 6.3 152 273-462 26-186 (223)
112 3n7t_A Macrophage binding prot 53.6 23 0.00079 31.3 6.1 42 3-44 4-57 (247)
113 2vo1_A CTP synthase 1; pyrimid 53.0 14 0.00049 32.9 4.4 38 5-42 20-60 (295)
114 2q6t_A DNAB replication FORK h 52.9 96 0.0033 30.0 11.1 44 9-52 202-246 (444)
115 1g63_A Epidermin modifying enz 52.6 12 0.0004 31.5 3.7 42 8-50 3-44 (181)
116 3l7i_A Teichoic acid biosynthe 52.5 3.7 0.00013 43.1 0.8 120 345-484 603-722 (729)
117 3bul_A Methionine synthase; tr 51.5 33 0.0011 34.6 7.4 50 6-55 97-146 (579)
118 3io3_A DEHA2D07832P; chaperone 51.4 59 0.002 30.4 8.9 40 7-46 17-59 (348)
119 3vot_A L-amino acid ligase, BL 50.9 10 0.00035 36.7 3.6 35 106-142 65-101 (425)
120 4b4o_A Epimerase family protei 50.8 11 0.00037 34.2 3.7 32 8-43 1-32 (298)
121 3ghy_A Ketopantoate reductase 50.7 11 0.00039 35.1 3.8 34 6-44 2-35 (335)
122 1mio_B Nitrogenase molybdenum 50.5 93 0.0032 30.3 10.5 35 106-145 375-409 (458)
123 3g0o_A 3-hydroxyisobutyrate de 50.3 8.7 0.0003 35.3 2.9 38 1-43 1-38 (303)
124 2iz6_A Molybdenum cofactor car 50.0 26 0.00088 29.2 5.5 45 343-387 91-139 (176)
125 3dm5_A SRP54, signal recogniti 49.9 80 0.0028 30.6 9.7 42 7-48 100-141 (443)
126 1bg6_A N-(1-D-carboxylethyl)-L 49.8 11 0.00038 35.3 3.6 34 5-43 2-35 (359)
127 2yvq_A Carbamoyl-phosphate syn 49.4 29 0.001 27.7 5.6 96 11-144 27-130 (143)
128 3kkl_A Probable chaperone prot 49.0 26 0.0009 30.9 5.7 39 6-44 2-51 (244)
129 3l6d_A Putative oxidoreductase 47.3 11 0.00039 34.6 3.1 37 1-42 3-39 (306)
130 3ty2_A 5'-nucleotidase SURE; s 45.6 24 0.00081 31.4 4.7 41 6-48 10-50 (261)
131 1uan_A Hypothetical protein TT 45.4 99 0.0034 26.7 8.8 20 104-125 83-102 (227)
132 4e5s_A MCCFLIKE protein (BA_56 44.5 23 0.00079 32.9 4.8 74 293-388 62-137 (331)
133 3ouz_A Biotin carboxylase; str 44.4 51 0.0017 31.9 7.5 36 4-44 3-38 (446)
134 3ksu_A 3-oxoacyl-acyl carrier 44.3 66 0.0023 28.3 7.8 58 8-68 11-69 (262)
135 3gpi_A NAD-dependent epimerase 43.1 27 0.00092 31.3 5.0 34 6-44 2-35 (286)
136 1jx7_A Hypothetical protein YC 42.4 24 0.00083 26.6 3.9 37 8-44 4-43 (117)
137 4gi5_A Quinone reductase; prot 42.3 36 0.0012 30.8 5.5 38 5-42 20-60 (280)
138 1lss_A TRK system potassium up 41.9 20 0.00069 27.8 3.5 32 7-43 4-35 (140)
139 2xw6_A MGS, methylglyoxal synt 41.4 32 0.0011 27.1 4.4 94 7-144 3-110 (134)
140 3hwr_A 2-dehydropantoate 2-red 41.4 25 0.00087 32.3 4.6 32 6-42 18-49 (318)
141 1e2b_A Enzyme IIB-cellobiose; 41.2 57 0.002 24.4 5.7 40 5-44 1-40 (106)
142 3llv_A Exopolyphosphatase-rela 40.3 18 0.00061 28.4 3.0 32 7-43 6-37 (141)
143 3hn2_A 2-dehydropantoate 2-red 40.0 42 0.0015 30.7 5.9 33 8-45 3-35 (312)
144 2q5c_A NTRC family transcripti 39.9 1.6E+02 0.0056 24.6 9.1 38 107-150 134-171 (196)
145 3i83_A 2-dehydropantoate 2-red 39.8 45 0.0015 30.6 6.0 40 8-53 3-42 (320)
146 4hb9_A Similarities with proba 39.7 19 0.00066 34.1 3.6 30 7-41 1-30 (412)
147 2dpo_A L-gulonate 3-dehydrogen 38.7 20 0.00068 33.2 3.3 38 1-44 1-38 (319)
148 2zts_A Putative uncharacterize 38.6 27 0.00091 30.4 4.1 46 8-53 31-77 (251)
149 4e3z_A Putative oxidoreductase 38.4 1E+02 0.0035 27.2 8.1 35 5-42 23-57 (272)
150 1g8m_A Aicar transformylase-IM 37.9 45 0.0015 33.2 5.7 97 21-134 15-111 (593)
151 2lpm_A Two-component response 37.6 29 0.00098 26.9 3.6 35 110-146 47-86 (123)
152 3lrx_A Putative hydrogenase; a 37.6 24 0.00083 28.6 3.4 38 7-47 23-60 (158)
153 1q57_A DNA primase/helicase; d 37.6 1.8E+02 0.0061 28.5 10.4 44 9-52 244-288 (503)
154 2lnd_A De novo designed protei 37.1 43 0.0015 23.3 3.9 50 378-440 50-100 (112)
155 4da9_A Short-chain dehydrogena 37.1 1.4E+02 0.0048 26.5 8.9 32 8-42 29-60 (280)
156 2w36_A Endonuclease V; hypoxan 36.9 51 0.0017 28.6 5.4 41 106-146 91-138 (225)
157 3kjh_A CO dehydrogenase/acetyl 36.4 25 0.00087 30.6 3.6 35 8-42 1-35 (254)
158 1zl0_A Hypothetical protein PA 36.0 44 0.0015 30.7 5.1 76 291-388 62-139 (311)
159 3rg8_A Phosphoribosylaminoimid 35.9 1.7E+02 0.0059 23.6 11.5 139 282-464 4-151 (159)
160 2xj4_A MIPZ; replication, cell 35.8 39 0.0013 30.4 4.8 37 7-43 3-41 (286)
161 1b93_A Protein (methylglyoxal 35.7 98 0.0034 24.9 6.5 94 8-144 12-118 (152)
162 4h1h_A LMO1638 protein; MCCF-l 35.6 38 0.0013 31.4 4.7 73 293-387 62-136 (327)
163 1pjq_A CYSG, siroheme synthase 35.6 77 0.0026 30.9 7.2 153 273-462 7-168 (457)
164 1p9o_A Phosphopantothenoylcyst 35.5 27 0.00091 32.2 3.6 24 23-46 67-90 (313)
165 1hdo_A Biliverdin IX beta redu 35.5 45 0.0016 27.7 5.0 33 8-44 4-36 (206)
166 3eag_A UDP-N-acetylmuramate:L- 35.0 37 0.0013 31.4 4.6 33 6-42 3-35 (326)
167 2l82_A Designed protein OR32; 34.9 71 0.0024 23.6 5.0 35 282-320 3-37 (162)
168 2zki_A 199AA long hypothetical 34.9 35 0.0012 28.6 4.1 37 7-44 4-41 (199)
169 1rw7_A YDR533CP; alpha-beta sa 34.7 70 0.0024 27.9 6.2 37 8-44 4-51 (243)
170 3u5t_A 3-oxoacyl-[acyl-carrier 34.6 88 0.003 27.6 7.0 37 3-42 22-58 (267)
171 3sr3_A Microcin immunity prote 34.5 41 0.0014 31.3 4.8 74 293-388 63-138 (336)
172 3to5_A CHEY homolog; alpha(5)b 34.3 50 0.0017 25.9 4.6 40 106-147 47-95 (134)
173 2vpq_A Acetyl-COA carboxylase; 34.2 1.3E+02 0.0043 29.0 8.6 32 8-44 2-33 (451)
174 4g6h_A Rotenone-insensitive NA 33.7 24 0.00083 35.0 3.3 34 6-44 41-74 (502)
175 3fwz_A Inner membrane protein 33.7 21 0.00072 28.1 2.3 33 7-44 7-39 (140)
176 4dll_A 2-hydroxy-3-oxopropiona 33.5 45 0.0015 30.7 4.9 33 6-43 30-62 (320)
177 2ew2_A 2-dehydropantoate 2-red 33.4 28 0.00096 31.6 3.5 32 7-43 3-34 (316)
178 2a5l_A Trp repressor binding p 33.3 49 0.0017 27.6 4.8 40 5-44 3-43 (200)
179 1xrs_B D-lysine 5,6-aminomutas 33.2 52 0.0018 29.3 5.0 48 6-53 119-175 (262)
180 3qha_A Putative oxidoreductase 33.2 24 0.00081 32.2 2.9 32 7-43 15-46 (296)
181 3pid_A UDP-glucose 6-dehydroge 32.6 29 0.00099 33.6 3.5 37 1-43 30-66 (432)
182 2r6j_A Eugenol synthase 1; phe 32.5 48 0.0016 30.1 4.9 33 9-45 13-45 (318)
183 1ydh_A AT5G11950; structural g 32.5 91 0.0031 26.8 6.3 44 343-387 89-143 (216)
184 1o97_C Electron transferring f 32.4 46 0.0016 29.7 4.6 40 106-147 102-147 (264)
185 3mjf_A Phosphoribosylamine--gl 32.3 55 0.0019 31.6 5.5 37 106-144 57-96 (431)
186 3eod_A Protein HNR; response r 32.2 90 0.0031 23.3 5.9 38 1-42 1-38 (130)
187 2hy5_A Putative sulfurtransfer 32.2 51 0.0018 25.6 4.4 26 19-44 15-41 (130)
188 2r85_A PURP protein PF1517; AT 32.2 43 0.0015 30.7 4.6 32 7-44 2-33 (334)
189 3ors_A N5-carboxyaminoimidazol 32.1 2E+02 0.007 23.3 11.0 139 282-465 5-157 (163)
190 4eg0_A D-alanine--D-alanine li 32.0 64 0.0022 29.4 5.7 38 7-44 13-54 (317)
191 2r6a_A DNAB helicase, replicat 31.9 2.4E+02 0.0082 27.2 10.2 45 8-52 204-249 (454)
192 1z7e_A Protein aRNA; rossmann 31.9 99 0.0034 31.7 7.7 40 108-149 67-107 (660)
193 3c24_A Putative oxidoreductase 31.9 38 0.0013 30.4 4.1 31 8-43 12-43 (286)
194 3dhn_A NAD-dependent epimerase 31.8 42 0.0014 28.6 4.2 33 8-44 5-37 (227)
195 3s2u_A UDP-N-acetylglucosamine 31.8 64 0.0022 30.2 5.8 27 357-385 92-121 (365)
196 3icc_A Putative 3-oxoacyl-(acy 31.8 2.5E+02 0.0084 24.1 11.8 33 8-43 7-39 (255)
197 3l4e_A Uncharacterized peptida 31.6 1.1E+02 0.0037 26.0 6.7 48 268-315 16-63 (206)
198 3lyu_A Putative hydrogenase; t 31.5 37 0.0013 26.9 3.4 114 7-144 18-136 (142)
199 2gdz_A NAD+-dependent 15-hydro 31.3 80 0.0027 27.8 6.2 39 1-43 1-39 (267)
200 2q62_A ARSH; alpha/beta, flavo 31.3 60 0.0021 28.6 5.1 38 5-42 32-72 (247)
201 3op4_A 3-oxoacyl-[acyl-carrier 31.3 66 0.0022 28.1 5.5 41 1-44 1-42 (248)
202 1pno_A NAD(P) transhydrogenase 31.2 49 0.0017 27.0 3.9 37 8-44 24-63 (180)
203 4egb_A DTDP-glucose 4,6-dehydr 31.0 90 0.0031 28.6 6.7 33 6-42 23-57 (346)
204 1efv_B Electron transfer flavo 30.8 51 0.0017 29.3 4.5 40 106-147 106-151 (255)
205 3pdi_B Nitrogenase MOFE cofact 30.7 41 0.0014 32.9 4.2 34 107-145 366-399 (458)
206 3cky_A 2-hydroxymethyl glutara 30.7 49 0.0017 29.9 4.6 32 6-42 3-34 (301)
207 1d4o_A NADP(H) transhydrogenas 30.7 50 0.0017 27.0 3.9 37 8-44 23-62 (184)
208 3dfu_A Uncharacterized protein 30.6 33 0.0011 30.0 3.2 33 6-43 5-37 (232)
209 3ucx_A Short chain dehydrogena 30.5 2E+02 0.007 25.0 8.7 32 9-43 12-43 (264)
210 2pn1_A Carbamoylphosphate synt 30.5 55 0.0019 30.0 5.0 34 5-44 2-37 (331)
211 3gl9_A Response regulator; bet 30.4 81 0.0028 23.4 5.3 38 110-149 40-86 (122)
212 3lzw_A Ferredoxin--NADP reduct 29.9 17 0.00058 33.2 1.3 35 5-44 5-39 (332)
213 1z82_A Glycerol-3-phosphate de 29.7 36 0.0012 31.5 3.6 32 7-43 14-45 (335)
214 2i2c_A Probable inorganic poly 29.7 23 0.00079 31.9 2.1 28 358-387 36-69 (272)
215 4e21_A 6-phosphogluconate dehy 29.6 37 0.0013 31.9 3.6 34 5-43 20-53 (358)
216 1tvm_A PTS system, galactitol- 29.6 1.1E+02 0.0037 23.0 5.7 38 5-42 19-57 (113)
217 3doj_A AT3G25530, dehydrogenas 29.6 44 0.0015 30.5 4.1 34 5-43 19-52 (310)
218 2gk4_A Conserved hypothetical 29.5 38 0.0013 29.6 3.4 21 24-44 32-52 (232)
219 1u11_A PURE (N5-carboxyaminoim 29.4 2.4E+02 0.0083 23.3 11.3 142 281-466 22-176 (182)
220 1ehi_A LMDDL2, D-alanine:D-lac 29.2 48 0.0017 31.3 4.4 38 6-43 2-44 (377)
221 2l2q_A PTS system, cellobiose- 29.2 69 0.0024 23.9 4.5 36 7-42 4-39 (109)
222 4e12_A Diketoreductase; oxidor 29.2 45 0.0015 30.0 4.0 34 5-43 2-35 (283)
223 3tjr_A Short chain dehydrogena 29.2 1.6E+02 0.0056 26.4 8.0 32 9-43 32-63 (301)
224 3rpe_A MDAB, modulator of drug 28.9 62 0.0021 27.9 4.6 42 2-43 20-68 (218)
225 2lse_A Four helix bundle prote 35.0 12 0.0004 25.6 0.0 36 447-483 26-61 (101)
226 3ic5_A Putative saccharopine d 28.8 46 0.0016 24.6 3.5 33 7-44 5-38 (118)
227 1o4v_A Phosphoribosylaminoimid 28.8 2.5E+02 0.0085 23.3 13.1 139 281-465 14-165 (183)
228 3sju_A Keto reductase; short-c 28.8 1.6E+02 0.0055 26.0 7.8 34 7-43 23-56 (279)
229 1efp_B ETF, protein (electron 28.7 51 0.0017 29.2 4.2 40 106-147 103-148 (252)
230 2ae2_A Protein (tropinone redu 28.7 2E+02 0.0069 24.9 8.3 40 1-43 1-41 (260)
231 2an1_A Putative kinase; struct 28.6 32 0.0011 31.2 2.9 30 356-387 62-95 (292)
232 1vmd_A MGS, methylglyoxal synt 28.6 78 0.0027 26.2 4.9 85 19-144 37-134 (178)
233 4ehi_A Bifunctional purine bio 28.5 60 0.002 31.9 4.8 49 8-70 24-72 (534)
234 4hcj_A THIJ/PFPI domain protei 28.3 96 0.0033 25.6 5.6 40 4-44 4-44 (177)
235 3vps_A TUNA, NAD-dependent epi 28.3 65 0.0022 29.0 5.1 40 1-44 1-40 (321)
236 3tsa_A SPNG, NDP-rhamnosyltran 28.2 68 0.0023 30.0 5.3 31 357-389 114-145 (391)
237 2hmt_A YUAA protein; RCK, KTN, 28.1 30 0.001 26.9 2.4 33 7-44 6-38 (144)
238 2fsv_C NAD(P) transhydrogenase 28.0 57 0.002 27.2 3.9 37 8-44 47-86 (203)
239 1xx6_A Thymidine kinase; NESG, 27.9 86 0.0029 26.3 5.3 44 1-44 1-45 (191)
240 1qkk_A DCTD, C4-dicarboxylate 27.6 1.1E+02 0.0037 23.8 5.8 47 378-440 74-120 (155)
241 3l4b_C TRKA K+ channel protien 27.6 23 0.00077 30.4 1.6 32 8-44 1-32 (218)
242 1djl_A Transhydrogenase DIII; 27.4 59 0.002 27.3 3.9 37 8-44 46-85 (207)
243 3edm_A Short chain dehydrogena 27.4 2E+02 0.0068 25.0 8.0 32 8-42 8-39 (259)
244 4e5v_A Putative THUA-like prot 27.4 72 0.0025 28.7 5.0 39 5-44 2-43 (281)
245 3ew7_A LMO0794 protein; Q8Y8U8 27.3 46 0.0016 28.1 3.7 33 8-44 1-33 (221)
246 2qyt_A 2-dehydropantoate 2-red 27.3 22 0.00076 32.5 1.6 32 7-43 8-45 (317)
247 3g1w_A Sugar ABC transporter; 27.2 3.2E+02 0.011 24.0 11.4 37 107-146 53-93 (305)
248 1evy_A Glycerol-3-phosphate de 27.2 30 0.001 32.5 2.5 31 9-44 17-47 (366)
249 2bcg_G Secretory pathway GDP d 27.2 40 0.0014 32.8 3.5 36 1-41 5-40 (453)
250 3ego_A Probable 2-dehydropanto 27.1 60 0.0021 29.6 4.5 32 7-44 2-33 (307)
251 3alj_A 2-methyl-3-hydroxypyrid 27.0 42 0.0014 31.5 3.6 32 5-41 9-40 (379)
252 1f0y_A HCDH, L-3-hydroxyacyl-C 26.9 41 0.0014 30.6 3.4 33 7-44 15-47 (302)
253 2d1p_B TUSC, hypothetical UPF0 26.8 83 0.0028 23.9 4.6 38 6-44 2-41 (119)
254 3h7a_A Short chain dehydrogena 26.7 1.6E+02 0.0054 25.6 7.2 33 8-43 7-39 (252)
255 1y1p_A ARII, aldehyde reductas 26.7 59 0.002 29.7 4.5 37 4-44 8-44 (342)
256 3uf0_A Short-chain dehydrogena 26.4 1.9E+02 0.0066 25.4 7.8 34 8-44 31-64 (273)
257 3gi1_A LBP, laminin-binding pr 26.4 3.5E+02 0.012 24.1 9.5 40 105-146 217-258 (286)
258 2vrn_A Protease I, DR1199; cys 26.3 1.3E+02 0.0045 24.7 6.3 39 5-44 7-45 (190)
259 3pgx_A Carveol dehydrogenase; 26.3 2.3E+02 0.0079 24.9 8.4 32 8-42 15-46 (280)
260 2w70_A Biotin carboxylase; lig 26.2 1.9E+02 0.0064 27.7 8.3 31 8-43 3-33 (449)
261 1yt5_A Inorganic polyphosphate 26.2 27 0.00093 31.1 1.9 28 357-386 41-71 (258)
262 4dmm_A 3-oxoacyl-[acyl-carrier 26.1 2.5E+02 0.0087 24.5 8.6 33 8-43 28-60 (269)
263 1o4v_A Phosphoribosylaminoimid 25.9 2.8E+02 0.0097 22.9 10.2 84 293-399 52-137 (183)
264 4fu0_A D-alanine--D-alanine li 25.9 40 0.0014 31.6 3.1 38 5-42 1-42 (357)
265 1ks9_A KPA reductase;, 2-dehyd 25.9 46 0.0016 29.7 3.5 32 8-44 1-32 (291)
266 3h4t_A Glycosyltransferase GTF 25.9 1.3E+02 0.0045 28.3 7.0 36 282-319 3-38 (404)
267 3hr8_A Protein RECA; alpha and 25.7 2.5E+02 0.0085 26.2 8.6 40 9-48 63-102 (356)
268 1e4e_A Vancomycin/teicoplanin 25.7 43 0.0015 31.1 3.3 39 6-44 2-44 (343)
269 2cob_A LCOR protein; MLR2, KIA 25.7 63 0.0022 22.1 3.1 32 421-455 9-40 (70)
270 2b69_A UDP-glucuronate decarbo 25.7 50 0.0017 30.4 3.8 35 5-43 25-59 (343)
271 3o1l_A Formyltetrahydrofolate 25.6 2.9E+02 0.01 25.0 8.7 110 4-148 102-212 (302)
272 1u0t_A Inorganic polyphosphate 25.6 30 0.001 31.8 2.1 31 355-387 73-107 (307)
273 2fb6_A Conserved hypothetical 25.6 63 0.0022 24.6 3.7 38 7-44 7-48 (117)
274 3ia7_A CALG4; glycosysltransfe 25.6 1.3E+02 0.0043 28.1 6.8 36 281-318 6-41 (402)
275 2pd6_A Estradiol 17-beta-dehyd 25.5 70 0.0024 28.0 4.6 39 1-43 1-39 (264)
276 3q9l_A Septum site-determining 25.2 71 0.0024 27.8 4.6 35 9-43 3-39 (260)
277 2i87_A D-alanine-D-alanine lig 25.1 36 0.0012 31.9 2.7 39 6-44 2-44 (364)
278 3czc_A RMPB; alpha/beta sandwi 25.0 79 0.0027 23.7 4.1 38 7-44 18-57 (110)
279 1v0j_A UDP-galactopyranose mut 25.0 37 0.0013 32.4 2.8 36 1-41 1-37 (399)
280 3t7c_A Carveol dehydrogenase; 25.0 2.9E+02 0.0099 24.6 8.9 33 8-43 28-60 (299)
281 2x5n_A SPRPN10, 26S proteasome 24.9 96 0.0033 26.0 5.1 61 8-70 107-171 (192)
282 3bfv_A CAPA1, CAPB2, membrane 24.9 83 0.0028 28.0 4.9 38 6-43 80-119 (271)
283 1dhr_A Dihydropteridine reduct 24.8 1E+02 0.0035 26.6 5.5 39 1-43 1-39 (241)
284 3f6r_A Flavodoxin; FMN binding 24.7 75 0.0026 24.9 4.2 37 8-44 2-39 (148)
285 3k96_A Glycerol-3-phosphate de 24.7 46 0.0016 31.2 3.3 33 7-44 29-61 (356)
286 3cg4_A Response regulator rece 24.6 1.3E+02 0.0043 22.8 5.6 39 1-43 1-39 (142)
287 2raf_A Putative dinucleotide-b 24.6 54 0.0018 27.9 3.5 33 6-43 18-50 (209)
288 3h2s_A Putative NADH-flavin re 24.6 56 0.0019 27.7 3.7 33 8-44 1-33 (224)
289 3t6k_A Response regulator rece 24.6 1.2E+02 0.0041 23.0 5.4 37 111-149 43-88 (136)
290 1f9y_A HPPK, protein (6-hydrox 24.5 75 0.0026 25.8 4.0 27 282-308 2-28 (158)
291 2qx0_A 7,8-dihydro-6-hydroxyme 24.5 1E+02 0.0035 25.0 4.9 27 282-308 3-29 (159)
292 2bru_C NAD(P) transhydrogenase 24.4 57 0.0019 26.7 3.2 38 8-45 31-71 (186)
293 2h78_A Hibadh, 3-hydroxyisobut 24.3 58 0.002 29.4 3.9 32 7-43 3-34 (302)
294 3enk_A UDP-glucose 4-epimerase 24.3 59 0.002 29.7 4.0 34 6-43 4-37 (341)
295 4gbj_A 6-phosphogluconate dehy 24.2 68 0.0023 29.1 4.3 30 8-42 6-35 (297)
296 1vdc_A NTR, NADPH dependent th 24.1 30 0.001 31.7 1.9 38 1-43 1-39 (333)
297 3uve_A Carveol dehydrogenase ( 24.1 2.8E+02 0.0096 24.4 8.5 32 8-42 11-42 (286)
298 2h31_A Multifunctional protein 24.1 4.8E+02 0.016 24.9 11.4 137 280-464 265-414 (425)
299 3k5i_A Phosphoribosyl-aminoimi 24.0 79 0.0027 30.1 4.9 37 1-42 18-54 (403)
300 3ing_A Homoserine dehydrogenas 24.0 99 0.0034 28.5 5.4 47 7-53 82-128 (325)
301 3f8d_A Thioredoxin reductase ( 23.9 56 0.0019 29.5 3.7 33 7-44 15-47 (323)
302 3hdv_A Response regulator; PSI 23.9 1.2E+02 0.0041 22.8 5.3 39 1-43 1-39 (136)
303 1t1j_A Hypothetical protein; s 23.7 91 0.0031 24.2 4.2 33 7-39 7-47 (125)
304 4grd_A N5-CAIR mutase, phospho 23.7 3E+02 0.01 22.5 11.2 143 279-465 11-166 (173)
305 3goc_A Endonuclease V; alpha-b 23.7 1.1E+02 0.0039 26.6 5.2 41 106-146 95-142 (237)
306 3ip0_A 2-amino-4-hydroxy-6-hyd 23.7 79 0.0027 25.7 4.0 27 282-308 2-28 (158)
307 3dtt_A NADP oxidoreductase; st 23.5 62 0.0021 28.3 3.8 35 5-44 17-51 (245)
308 2bi7_A UDP-galactopyranose mut 23.5 55 0.0019 30.9 3.7 32 6-42 2-33 (384)
309 3oid_A Enoyl-[acyl-carrier-pro 23.3 2.8E+02 0.0097 24.0 8.3 31 8-41 4-34 (258)
310 2rir_A Dipicolinate synthase, 23.3 1.1E+02 0.0037 27.7 5.5 34 4-42 4-37 (300)
311 3osu_A 3-oxoacyl-[acyl-carrier 23.2 3.1E+02 0.011 23.4 8.4 33 8-43 4-36 (246)
312 3nbm_A PTS system, lactose-spe 23.1 78 0.0027 23.7 3.7 39 4-42 3-41 (108)
313 3e5n_A D-alanine-D-alanine lig 23.0 51 0.0017 31.3 3.3 41 4-44 19-63 (386)
314 2vou_A 2,6-dihydroxypyridine h 22.9 65 0.0022 30.4 4.1 32 5-41 3-34 (397)
315 3f67_A Putative dienelactone h 22.9 1E+02 0.0034 25.9 5.1 36 8-43 32-67 (241)
316 2qv7_A Diacylglycerol kinase D 22.9 1.2E+02 0.0041 27.9 5.9 29 358-388 81-115 (337)
317 3e1t_A Halogenase; flavoprotei 22.9 41 0.0014 33.3 2.7 37 1-42 1-37 (512)
318 4huj_A Uncharacterized protein 22.9 32 0.0011 29.6 1.7 33 5-42 21-53 (220)
319 3r3s_A Oxidoreductase; structu 22.9 2E+02 0.0069 25.6 7.3 34 8-44 49-82 (294)
320 4b4k_A N5-carboxyaminoimidazol 22.8 3.2E+02 0.011 22.5 13.1 145 280-465 22-176 (181)
321 3d1l_A Putative NADP oxidoredu 22.8 36 0.0012 30.2 2.0 37 1-42 4-41 (266)
322 2pju_A Propionate catabolism o 22.7 1.1E+02 0.0037 26.5 5.0 69 357-442 63-154 (225)
323 1gsa_A Glutathione synthetase; 22.7 74 0.0025 28.6 4.3 37 8-44 2-41 (316)
324 1ydg_A Trp repressor binding p 22.6 1E+02 0.0035 25.9 5.0 39 6-44 5-44 (211)
325 3end_A Light-independent proto 22.5 94 0.0032 28.1 4.9 35 8-42 42-76 (307)
326 3obb_A Probable 3-hydroxyisobu 22.5 68 0.0023 29.2 3.9 30 8-42 4-33 (300)
327 3ea0_A ATPase, para family; al 22.4 68 0.0023 27.6 3.9 38 7-44 3-43 (245)
328 2hqm_A GR, grase, glutathione 22.3 49 0.0017 32.4 3.1 39 1-44 5-43 (479)
329 3v8b_A Putative dehydrogenase, 22.3 2.7E+02 0.0091 24.6 7.9 33 8-43 28-60 (283)
330 3tsc_A Putative oxidoreductase 22.3 2.6E+02 0.0089 24.5 7.9 33 8-43 11-43 (277)
331 3tl4_X Glutaminyl-tRNA synthet 22.3 1E+02 0.0035 25.8 4.5 59 426-485 117-182 (187)
332 3pxx_A Carveol dehydrogenase; 22.2 2.6E+02 0.0089 24.5 7.9 33 8-43 10-42 (287)
333 3lk7_A UDP-N-acetylmuramoylala 22.2 99 0.0034 29.9 5.3 33 6-43 8-40 (451)
334 2rjn_A Response regulator rece 22.2 1.5E+02 0.0052 22.9 5.7 39 1-43 1-39 (154)
335 1iow_A DD-ligase, DDLB, D-ALA\ 22.2 1.1E+02 0.0036 27.5 5.3 38 7-44 2-43 (306)
336 3tla_A MCCF; serine protease, 22.2 75 0.0026 30.0 4.2 75 291-387 91-167 (371)
337 3qbc_A 2-amino-4-hydroxy-6-hyd 22.2 88 0.003 25.5 4.0 27 282-308 6-32 (161)
338 2bon_A Lipid kinase; DAG kinas 22.2 1.9E+02 0.0065 26.5 7.1 82 279-388 30-119 (332)
339 2q3e_A UDP-glucose 6-dehydroge 22.1 74 0.0025 31.1 4.3 35 4-43 2-38 (467)
340 3ppi_A 3-hydroxyacyl-COA dehyd 22.0 95 0.0032 27.5 4.8 33 8-43 30-62 (281)
341 1byi_A Dethiobiotin synthase; 22.0 92 0.0031 26.4 4.6 32 10-41 4-36 (224)
342 3s55_A Putative short-chain de 21.8 2.8E+02 0.0095 24.3 8.0 33 8-43 10-42 (281)
343 1rtt_A Conserved hypothetical 21.7 45 0.0015 27.8 2.4 39 3-42 2-43 (193)
344 3slg_A PBGP3 protein; structur 21.7 55 0.0019 30.5 3.2 35 6-44 23-58 (372)
345 3ius_A Uncharacterized conserv 21.6 45 0.0016 29.6 2.5 33 7-44 5-37 (286)
346 1vi6_A 30S ribosomal protein S 21.6 76 0.0026 27.1 3.7 31 117-147 114-146 (208)
347 4dgk_A Phytoene dehydrogenase; 21.6 42 0.0014 32.9 2.5 29 8-41 2-30 (501)
348 3u7q_A Nitrogenase molybdenum- 21.5 60 0.002 32.0 3.5 35 106-145 407-441 (492)
349 1eyh_A Epsin; superhelix of he 21.5 88 0.003 24.9 3.9 35 426-460 107-141 (144)
350 3lou_A Formyltetrahydrofolate 21.5 4.1E+02 0.014 23.8 8.9 105 5-147 93-201 (292)
351 2c5m_A CTP synthase; cytidine 21.4 82 0.0028 27.9 3.9 37 6-42 21-60 (294)
352 3awd_A GOX2181, putative polyo 21.4 2.7E+02 0.0093 23.9 7.7 33 9-44 14-46 (260)
353 3dqp_A Oxidoreductase YLBE; al 21.4 60 0.0021 27.5 3.2 33 8-44 1-33 (219)
354 3e18_A Oxidoreductase; dehydro 21.4 3.3E+02 0.011 25.1 8.6 109 281-410 7-123 (359)
355 3l18_A Intracellular protease 21.3 1.9E+02 0.0066 23.1 6.2 38 6-44 1-38 (168)
356 1txg_A Glycerol-3-phosphate de 21.2 71 0.0024 29.2 3.9 31 8-43 1-31 (335)
357 3dme_A Conserved exported prot 21.2 61 0.0021 29.9 3.5 32 6-42 3-34 (369)
358 3m6m_D Sensory/regulatory prot 21.2 1.1E+02 0.0038 23.4 4.6 36 111-148 53-99 (143)
359 3rkr_A Short chain oxidoreduct 21.1 2.3E+02 0.0079 24.6 7.2 32 9-43 30-61 (262)
360 2q5c_A NTRC family transcripti 20.9 87 0.003 26.4 4.0 30 357-389 51-80 (196)
361 1xmp_A PURE, phosphoribosylami 20.9 3.5E+02 0.012 22.1 13.0 140 280-465 11-165 (170)
362 1cyd_A Carbonyl reductase; sho 20.8 1.6E+02 0.0055 25.1 6.0 40 1-44 1-40 (244)
363 1cbk_A Protein (7,8-dihydro-6- 20.8 98 0.0033 25.2 4.0 27 282-308 3-29 (160)
364 2d1p_A TUSD, hypothetical UPF0 20.8 1.1E+02 0.0038 24.1 4.4 38 7-44 12-53 (140)
365 3f6p_A Transcriptional regulat 20.8 1.4E+02 0.0047 21.9 4.9 38 110-149 40-83 (120)
366 1xgw_A Epsin 4; ENTH, enthopro 20.8 45 0.0015 27.7 2.0 35 426-460 137-171 (176)
367 3sxp_A ADP-L-glycero-D-mannohe 20.7 69 0.0024 29.7 3.7 35 5-43 8-44 (362)
368 3i4f_A 3-oxoacyl-[acyl-carrier 20.7 3E+02 0.01 23.7 7.9 34 7-43 6-39 (264)
369 3ot1_A 4-methyl-5(B-hydroxyeth 20.7 1.6E+02 0.0054 24.8 5.7 37 7-44 9-45 (208)
370 1nff_A Putative oxidoreductase 20.6 1.7E+02 0.0057 25.6 6.1 39 1-43 1-39 (260)
371 1cp2_A CP2, nitrogenase iron p 20.5 95 0.0032 27.3 4.4 33 9-41 3-35 (269)
372 3of5_A Dethiobiotin synthetase 20.4 1.2E+02 0.0041 26.1 5.0 34 8-41 4-39 (228)
373 1lld_A L-lactate dehydrogenase 20.3 55 0.0019 29.9 2.8 36 4-44 4-41 (319)
374 3qxc_A Dethiobiotin synthetase 20.3 1E+02 0.0035 26.9 4.5 36 6-41 19-56 (242)
375 2etv_A Iron(III) ABC transport 20.1 79 0.0027 29.3 4.0 37 107-146 88-125 (346)
376 3s40_A Diacylglycerol kinase; 20.1 2E+02 0.0069 25.9 6.6 84 279-388 9-98 (304)
377 1i36_A Conserved hypothetical 20.1 73 0.0025 28.0 3.6 30 8-42 1-30 (264)
378 2vqe_B 30S ribosomal protein S 20.1 71 0.0024 28.3 3.3 33 116-148 156-190 (256)
379 4g65_A TRK system potassium up 20.1 29 0.001 33.9 0.9 41 7-54 3-43 (461)
380 3g79_A NDP-N-acetyl-D-galactos 20.1 1E+02 0.0036 30.1 4.9 35 5-44 16-52 (478)
381 3imf_A Short chain dehydrogena 20.0 3.1E+02 0.011 23.6 7.8 32 9-43 7-38 (257)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.4e-69 Score=538.80 Aligned_cols=432 Identities=25% Similarity=0.401 Sum_probs=348.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHR--AIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCE 83 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rG--H~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (489)
+++||+++|+|++||++|++.||+.|++|| +.|||++++.+..++.+.. ....++++|+.+| ++++++.+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ip-----dglp~~~~ 83 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVH-----DGLPKGYV 83 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECC-----CCCCTTCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecC-----CCCCCCcc
Confidence 368999999999999999999999999999 9999999876555432211 0013479999987 57777655
Q ss_pred CCCCCCchhhHHHHHHHH-hhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhhhc
Q 042970 84 NFDMLPSIDLASKFFNSH-SMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLHILRDS 162 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~~~ 162 (489)
.... .. ..+..+.... ..+.+.+.+++++.+.++||||+|.+++|+..+|+++|||++.|++++++.+..+.+.+..
T Consensus 84 ~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 84 SSGN-PR-EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCSC-TT-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccCC-hH-HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 4432 11 3344444433 3455666666655346899999999999999999999999999999999988887775432
Q ss_pred ccCCC--CCCCCccc-cCCCCCCCccccccCCC-CCC-C--CChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhh
Q 042970 163 KVHEN--VTSDSEYF-KVPGLPDQIEFTKVQLP-IFP-S--DDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNA 235 (489)
Q Consensus 163 ~~~~~--~~~~~~~~-~~p~~p~~~~~~~~~l~-~~~-~--~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~ 235 (489)
..... .......+ .+||+|+ ++.++++ ++. . ..+..++.+..+...+++++++||+++||++++++++..
T Consensus 162 ~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~ 238 (454)
T 3hbf_A 162 REKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK 238 (454)
T ss_dssp HHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT
T ss_pred HhhcCCCccccccccccCCCCCC---cChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc
Confidence 11100 00112233 4899986 8888999 543 2 224566677777888999999999999999999988876
Q ss_pred cCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEE
Q 042970 236 KQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWV 315 (489)
Q Consensus 236 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~ 315 (489)
+ +++++|||++...... ...++.+|.+||+.+++++||||||||+...+.+++.+++.+|++++++|||+
T Consensus 239 ~-~~v~~vGPl~~~~~~~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~ 308 (454)
T 3hbf_A 239 F-KLLLNVGPFNLTTPQR---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWS 308 (454)
T ss_dssp S-SCEEECCCHHHHSCCS---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_pred C-CCEEEECCcccccccc---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEE
Confidence 6 7999999997643211 01135789999999888899999999999988999999999999999999999
Q ss_pred EecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCcchhhH
Q 042970 316 TRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQFCNE 395 (489)
Q Consensus 316 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na 395 (489)
++..... . +|++|.++. ++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||
T Consensus 309 ~~~~~~~----~--lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na 381 (454)
T 3hbf_A 309 FRGDPKE----K--LPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNT 381 (454)
T ss_dssp CCSCHHH----H--SCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred eCCcchh----c--CCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHH
Confidence 9875321 2 788887655 47888889999999999999888999999999999999999999999999999999
Q ss_pred HHHHHH-hcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 042970 396 KLIVEV-LRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSSYNNIQ 474 (489)
Q Consensus 396 ~~v~e~-~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~ 474 (489)
++++ + +|+|+.++.. .+++++|+++|+++|+| +++++||+||+++++++++++++||||.++++
T Consensus 382 ~~v~-~~~g~Gv~l~~~-------------~~~~~~l~~av~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~ 446 (454)
T 3hbf_A 382 ILTE-SVLEIGVGVDNG-------------VLTKESIKKALELTMSS-EKGGIMRQKIVKLKESAFKAVEQNGTSAMDFT 446 (454)
T ss_dssp HHHH-TTSCSEEECGGG-------------SCCHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred HHHH-HhhCeeEEecCC-------------CCCHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHhhccCCCHHHHHH
Confidence 9995 7 6999999765 69999999999999975 67889999999999999999999999999999
Q ss_pred HHHHHHHc
Q 042970 475 LFFQDIMQ 482 (489)
Q Consensus 475 ~~~~~~~~ 482 (489)
+|+++|.+
T Consensus 447 ~~v~~i~~ 454 (454)
T 3hbf_A 447 TLIQIVTS 454 (454)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 99999863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.1e-63 Score=508.41 Aligned_cols=453 Identities=28% Similarity=0.501 Sum_probs=326.5
Q ss_pred CCCC-CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCC-CceEEEEeeCCcccCCC
Q 042970 1 MASE-ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSG-LQIRLVEIQFPWQEAGL 78 (489)
Q Consensus 1 m~~~-~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~ 78 (489)
|+.. ++++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+........+ ++++|+.++ +++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~l 75 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGL 75 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCC
Confidence 4444 456899999999999999999999999999999999999876655433211100011 379999987 344
Q ss_pred CCCCCCCCCCCchhhHHHHHHHH-hhchHHHHHHHhhc-----CCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHH
Q 042970 79 PQGCENFDMLPSIDLASKFFNSH-SMLQLPFENLFSEQ-----SPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFC 152 (489)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~-----~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~ 152 (489)
++......... +.. .+.... ..+...+++++++. ..++|+||+|.++.|+..+|+++|||++.++++++..
T Consensus 76 p~~~~~~~~~~--~~~-~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 152 (482)
T 2pq6_A 76 TPMEGDGDVSQ--DVP-TLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACS 152 (482)
T ss_dssp C---------C--CHH-HHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHH
T ss_pred CCcccccCcch--hHH-HHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHH
Confidence 44110001011 111 223333 45566777777643 2589999999999999999999999999999999877
Q ss_pred HHHHhhhhhcccCCCCCC-----------CCccccCCCCCCCccccccCCC-CCCC----CChHHHHHHHHHhcccCcEE
Q 042970 153 LFCLHILRDSKVHENVTS-----------DSEYFKVPGLPDQIEFTKVQLP-IFPS----DDMKDINEQMLAADKKTFGI 216 (489)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~p~~p~~~~~~~~~l~-~~~~----~~~~~~~~~~~~~~~~~~~~ 216 (489)
...+.+.+.+......+. ......+|+++. +...+++ ++.. ..+...+....+...+++++
T Consensus 153 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 229 (482)
T 2pq6_A 153 LLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTI 229 (482)
T ss_dssp HHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCE
T ss_pred HHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEE
Confidence 665543322110010000 011113456653 4555666 4322 12334444556667789999
Q ss_pred EecChhhhhhHHHHHHHhhcCCceEEeCcccCC-CccchhhhhcC--CCCCCCchhhhhhccCCCCCeEEEEEeCCcccC
Q 042970 217 IINTVEELESAYFREYKNAKQGKVWCIGPVSLC-NKESIDKVERG--NKAAIDVPECLTWLDSQQPSSVVYVCLGSICNL 293 (489)
Q Consensus 217 l~~t~~~l~~~~~~~~~~~~~~~~~~vGp~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~ 293 (489)
++||+++|+++++++++..+ +++++|||++.. +.......... ...+..+.++.+||+.++++++|||||||+...
T Consensus 230 l~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~ 308 (482)
T 2pq6_A 230 LLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVM 308 (482)
T ss_dssp EESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCC
T ss_pred EEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccC
Confidence 99999999999999888877 899999999753 11100000000 111123457999999988889999999999888
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHH
Q 042970 294 TSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSL 373 (489)
Q Consensus 294 ~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~ 373 (489)
+.+++.+++.+|++++++|||+++.....+.... +|+++.++. ++|+++++|+||.++|+|+++++||||||+||++
T Consensus 309 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~ 385 (482)
T 2pq6_A 309 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVI--FSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTT 385 (482)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGG--SCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcCCcccccccc--CcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHH
Confidence 8888999999999999999999985421111111 567776554 5799999999999999999999999999999999
Q ss_pred HHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHH
Q 042970 374 EGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAK 453 (489)
Q Consensus 374 eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~ 453 (489)
||+++|||+|++|++.||+.||+++++++|+|+.++ . .+++++|+++|+++|+|+ ++++||+||+
T Consensus 386 Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~-------------~~~~~~l~~~i~~ll~~~-~~~~~r~~a~ 450 (482)
T 2pq6_A 386 ESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T-------------NVKREELAKLINEVIAGD-KGKKMKQKAM 450 (482)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S-------------SCCHHHHHHHHHHHHTSH-HHHHHHHHHH
T ss_pred HHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C-------------CCCHHHHHHHHHHHHcCC-cHHHHHHHHH
Confidence 999999999999999999999999954799999997 5 599999999999999875 3678999999
Q ss_pred HHHHHHHHHHhhCCChHHHHHHHHHHHHcC
Q 042970 454 EFEELAKRALEEGGSSYNNIQLFFQDIMQQ 483 (489)
Q Consensus 454 ~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 483 (489)
++++.+++++++||||.+++++|+++|.+.
T Consensus 451 ~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 451 ELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998654
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=7.1e-63 Score=500.64 Aligned_cols=442 Identities=28% Similarity=0.426 Sum_probs=330.0
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcc--hhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANH-RAIVTIVTTPVN--AARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQG 81 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~r-GH~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (489)
.+++||+++|+|++||++|+++||++|++| ||+|||++++.+ ...+.+... ....+++|+.++... .++.
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~----~~~~ 76 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVD----LTDL 76 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCC----CTTS
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCC----CCCC
Confidence 346899999999999999999999999998 999999998874 333333210 112479999987431 1111
Q ss_pred CCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhc--CCCC-cEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhh
Q 042970 82 CENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQ--SPKP-CCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLHI 158 (489)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~--~~~~-D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~ 158 (489)
... ......+........+.+++++++. ..++ |+||+|.+..|+..+|+++|||++.+++++++.+..+.+
T Consensus 77 ----~~~--~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 150 (480)
T 2vch_A 77 ----SSS--TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLH 150 (480)
T ss_dssp ----CTT--CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHH
T ss_pred ----CCc--hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHH
Confidence 001 1222333444455666777777652 2478 999999999999999999999999999999887766654
Q ss_pred hhhccc--CCCCCCCCccccCCCCCCCccccccCCC-CCCCC--ChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHH
Q 042970 159 LRDSKV--HENVTSDSEYFKVPGLPDQIEFTKVQLP-IFPSD--DMKDINEQMLAADKKTFGIIINTVEELESAYFREYK 233 (489)
Q Consensus 159 ~~~~~~--~~~~~~~~~~~~~p~~p~~~~~~~~~l~-~~~~~--~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~ 233 (489)
.+.... ............+|++++ +...+++ .+... .....+......++++.++++|++.+|++..+..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~ 227 (480)
T 2vch_A 151 LPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227 (480)
T ss_dssp HHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHH
T ss_pred HHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHH
Confidence 432111 011000012334677765 5556666 33221 123333444556678889999999999998877776
Q ss_pred hhc--CCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCC
Q 042970 234 NAK--QGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKP 311 (489)
Q Consensus 234 ~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~ 311 (489)
+.. .+++++|||++...... . .+..+.++.+||+.++++++|||||||+...+.+++.+++.+|++++++
T Consensus 228 ~~~~~~~~v~~vGpl~~~~~~~------~--~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~ 299 (480)
T 2vch_A 228 EPGLDKPPVYPVGPLVNIGKQE------A--KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQR 299 (480)
T ss_dssp SCCTTCCCEEECCCCCCCSCSC------C-------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCE
T ss_pred hcccCCCcEEEEeccccccccc------c--CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCc
Confidence 421 26899999997643210 0 0113578999999988889999999999988899999999999999999
Q ss_pred EEEEEecCCch-----------hhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCC
Q 042970 312 FIWVTRVGNKL-----------EELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGV 380 (489)
Q Consensus 312 ~v~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~Gv 380 (489)
|||+++..... ..+.++ +|++|.++++..++++.+|+||.+||+|+++++|||||||||++||+++||
T Consensus 300 ~lw~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~Gv 378 (480)
T 2vch_A 300 FLWVIRSPSGIANSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGI 378 (480)
T ss_dssp EEEEECCCCSSTTTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTC
T ss_pred EEEEECCccccccccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCC
Confidence 99999864310 112122 788998888777777877999999999999999999999999999999999
Q ss_pred cEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 042970 381 QMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAK 460 (489)
Q Consensus 381 P~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 460 (489)
|||++|++.||+.||+++++++|+|+.++..+ ++.+++++|+++|+++|++ +++++||+||++++++++
T Consensus 379 P~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~----------~~~~~~~~l~~av~~vl~~-~~~~~~r~~a~~l~~~~~ 447 (480)
T 2vch_A 379 PLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD----------DGLVRREEVARVVKGLMEG-EEGKGVRNKMKELKEAAC 447 (480)
T ss_dssp CEEECCCSTTHHHHHHHHHHTTCCEECCCCCT----------TSCCCHHHHHHHHHHHHTS-THHHHHHHHHHHHHHHHH
T ss_pred CEEeccccccchHHHHHHHHHhCeEEEeeccc----------CCccCHHHHHHHHHHHhcC-cchHHHHHHHHHHHHHHH
Confidence 99999999999999999745999999986430 1258999999999999974 366799999999999999
Q ss_pred HHHhhCCChHHHHHHHHHHHHc
Q 042970 461 RALEEGGSSYNNIQLFFQDIMQ 482 (489)
Q Consensus 461 ~~~~~gg~~~~~~~~~~~~~~~ 482 (489)
+++++||+|.+++++|++++.+
T Consensus 448 ~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 448 RVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999875
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.2e-62 Score=493.91 Aligned_cols=439 Identities=23% Similarity=0.379 Sum_probs=324.4
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCe--EEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAI--VTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGL 78 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 78 (489)
|...++++||+++|+|++||++|+++||++|++|||+ |||++++.+.+.+...... ....+++|+.++ +++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~-----~gl 73 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDIS-----DGV 73 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECC-----CCC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCC-----CCC
Confidence 7777778999999999999999999999999999766 5778776544433221100 012479999886 355
Q ss_pred CCCCCCCCCCCchhhHHHHHHHH-hhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHh
Q 042970 79 PQGCENFDMLPSIDLASKFFNSH-SMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLH 157 (489)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~ 157 (489)
+++.+... . ....+..+.... ..+.+.+.+++++.+.+||+||+|.++.|+..+|+++|||++.++++++..+..+.
T Consensus 74 p~~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~ 151 (456)
T 2c1x_A 74 PEGYVFAG-R-PQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHV 151 (456)
T ss_dssp CTTCCCCC-C-TTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHH
T ss_pred CCcccccC-C-hHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHh
Confidence 55432111 1 123333344333 23444455554332369999999999999999999999999999999887665543
Q ss_pred hhhhc---ccCCC-CC-CCCccccCCCCCCCccccccCCC-CCCCC----ChHHHHHHHHHhcccCcEEEecChhhhhhH
Q 042970 158 ILRDS---KVHEN-VT-SDSEYFKVPGLPDQIEFTKVQLP-IFPSD----DMKDINEQMLAADKKTFGIIINTVEELESA 227 (489)
Q Consensus 158 ~~~~~---~~~~~-~~-~~~~~~~~p~~p~~~~~~~~~l~-~~~~~----~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~ 227 (489)
+.... ..... .. .......+|++++ ++..+++ .+... .+..++.++.+...+++++++||+++|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~ 228 (456)
T 2c1x_A 152 YIDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDS 228 (456)
T ss_dssp THHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred hhHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHH
Confidence 32210 01000 01 1111224678775 5666776 33211 233445555556678999999999999999
Q ss_pred HHHHHHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHh
Q 042970 228 YFREYKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA 307 (489)
Q Consensus 228 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~ 307 (489)
.++.++..+ +++++|||++...... .+..+.++.+|++.++++++|||||||....+.+++.+++.+|++
T Consensus 229 ~~~~~~~~~-~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~ 298 (456)
T 2c1x_A 229 LTNDLKSKL-KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEA 298 (456)
T ss_dssp HHHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHh
Confidence 888887776 6899999987543211 001235689999998888999999999998888889999999999
Q ss_pred CCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCC
Q 042970 308 SKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL 387 (489)
Q Consensus 308 ~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~ 387 (489)
++++|||+++..... . +|++|.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+
T Consensus 299 ~~~~~lw~~~~~~~~----~--l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 299 SRVPFIWSLRDKARV----H--LPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp HTCCEEEECCGGGGG----G--SCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cCCeEEEEECCcchh----h--CCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCC
Confidence 999999999865321 1 677776554 578999999999999999999999999999999999999999999999
Q ss_pred cCcchhhHHHHHHHh-cceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhC
Q 042970 388 FGDQFCNEKLIVEVL-RIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEG 466 (489)
Q Consensus 388 ~~DQ~~na~~v~e~~-g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~g 466 (489)
+.||+.||++++ +. |+|+.++.. .+++++|+++|+++|+|+ ++++||+||+++++.+++++++|
T Consensus 372 ~~dQ~~Na~~l~-~~~g~g~~l~~~-------------~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~~~g 436 (456)
T 2c1x_A 372 FGDQRLNGRMVE-DVLEIGVRIEGG-------------VFTKSGLMSCFDQILSQE-KGKKLRENLRALRETADRAVGPK 436 (456)
T ss_dssp STTHHHHHHHHH-HTSCCEEECGGG-------------SCCHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHTSTT
T ss_pred hhhHHHHHHHHH-HHhCeEEEecCC-------------CcCHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHHHHhhhcC
Confidence 999999999995 76 999999765 699999999999999875 47899999999999999999999
Q ss_pred CChHHHHHHHHHHHHcC
Q 042970 467 GSSYNNIQLFFQDIMQQ 483 (489)
Q Consensus 467 g~~~~~~~~~~~~~~~~ 483 (489)
|||.+++++|++++.+.
T Consensus 437 GsS~~~l~~~v~~~~~~ 453 (456)
T 2c1x_A 437 GSSTENFITLVDLVSKP 453 (456)
T ss_dssp CHHHHHHHHHHHHHTSC
T ss_pred CcHHHHHHHHHHHHHhc
Confidence 99999999999999654
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=6.1e-62 Score=491.99 Aligned_cols=438 Identities=26% Similarity=0.436 Sum_probs=327.9
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchh-hHHHHHHHhhhCCCceEEEEeeCCcccCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTPVNAA-RLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQG 81 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (489)
++++||+++|+|++||++|+++||++|++| ||+|||++++.+.+ .+.+........+++++|+.+|... +++
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~~~- 81 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVE----PPP- 81 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCC----CCC-
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCC----CCc-
Confidence 457899999999999999999999999999 99999999887532 1222222211123589999987321 221
Q ss_pred CCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhc-CCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhh
Q 042970 82 CENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQ-SPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLHILR 160 (489)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~ 160 (489)
.+.. ...+.. +..........+++++++. ..+||+||+|.++.|+..+|+++|||++.++++++..+..+.+.+
T Consensus 82 ~~~~---~~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 156 (463)
T 2acv_A 82 QELL---KSPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLK 156 (463)
T ss_dssp GGGG---GSHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGG
T ss_pred cccc---CCccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHH
Confidence 1100 111222 4444455666777777652 358999999999999999999999999999999988777666554
Q ss_pred hcccCCCCCCCCc---cccCCCC-CCCccccccCCC-CC-CCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHh
Q 042970 161 DSKVHENVTSDSE---YFKVPGL-PDQIEFTKVQLP-IF-PSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKN 234 (489)
Q Consensus 161 ~~~~~~~~~~~~~---~~~~p~~-p~~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~ 234 (489)
............. ...+|++ ++ +...+++ .+ ........+....+..+++.++++||+++|++...+.+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~ 233 (463)
T 2acv_A 157 NRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYD 233 (463)
T ss_dssp GSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHH
T ss_pred hhcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHh
Confidence 3221111111122 4456787 54 5566666 22 1122333344445556788899999999999988887766
Q ss_pred hc--CCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCC
Q 042970 235 AK--QGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSIC-NLTSSQLIELGLGLEASKKP 311 (489)
Q Consensus 235 ~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~-~~~~~~~~~~~~al~~~~~~ 311 (489)
.. ++++++|||++........ ...+..+.++.+||+.++++++|||||||+. ..+.+++.+++.+|++.+++
T Consensus 234 ~~~p~~~v~~vGpl~~~~~~~~~-----~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~ 308 (463)
T 2acv_A 234 HDEKIPPIYAVGPLLDLKGQPNP-----KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVR 308 (463)
T ss_dssp HCTTSCCEEECCCCCCSSCCCBT-----TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCE
T ss_pred ccccCCcEEEeCCCccccccccc-----ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCc
Confidence 54 5799999999764320000 0000124689999999888899999999999 78888899999999999999
Q ss_pred EEEEEecCCchhhhhhhhchhhHHHHhc-CCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCc
Q 042970 312 FIWVTRVGNKLEELEKWLVEENFEERIK-GRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGD 390 (489)
Q Consensus 312 ~v~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~D 390 (489)
|||+++.+.. . +|++|.++.. ++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.|
T Consensus 309 ~l~~~~~~~~-----~--l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~d 381 (463)
T 2acv_A 309 FLWSNSAEKK-----V--FPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAE 381 (463)
T ss_dssp EEEECCCCGG-----G--SCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred EEEEECCCcc-----c--CChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhh
Confidence 9999986411 1 6667765542 458888899999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHhcceeEec-ccCCccccccccccc--cccHHHHHHHHHHhcc-CChhHHHHHHHHHHHHHHHHHHHhhC
Q 042970 391 QFCNEKLIVEVLRIGVSVG-VEVPLKFGEEEKIGV--LVKKDDVETAINILMD-DGEERDVRRKRAKEFEELAKRALEEG 466 (489)
Q Consensus 391 Q~~na~~v~e~~g~G~~l~-~~~~~~~~~~~~~~~--~~~~~~l~~ai~~il~-~~~~~~~~~~~a~~l~~~~~~~~~~g 466 (489)
|+.||+++++++|+|+.+. ..+ .. .+++++|+++|+++|+ ++ +||+||+++++.+++++++|
T Consensus 382 Q~~Na~~lv~~~g~g~~l~~~~~----------~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~~~g 447 (463)
T 2acv_A 382 QQLNAFRLVKEWGVGLGLRVDYR----------KGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAVVDG 447 (463)
T ss_dssp HHHHHHHHHHTSCCEEESCSSCC----------TTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHTSTT
T ss_pred hHHHHHHHHHHcCeEEEEecccC----------CCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHhcC
Confidence 9999999425999999982 110 01 4899999999999997 35 89999999999999999999
Q ss_pred CChHHHHHHHHHHHH
Q 042970 467 GSSYNNIQLFFQDIM 481 (489)
Q Consensus 467 g~~~~~~~~~~~~~~ 481 (489)
|||.+++++|++++.
T Consensus 448 Gss~~~l~~~v~~~~ 462 (463)
T 2acv_A 448 GSSLISVGKLIDDIT 462 (463)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhc
Confidence 999999999999984
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.6e-46 Score=374.21 Aligned_cols=383 Identities=16% Similarity=0.160 Sum_probs=262.1
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCEN 84 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (489)
|+++||+|+++|++||++|+++||++|++|||+|+|++++...+.+.+. +++|+.++. +++.....
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~-----~~~~~~~~ 75 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDS-----ILPKESNP 75 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCC-----CSCCTTCT
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCc-----cccccccc
Confidence 5668999999999999999999999999999999999998776655544 788888763 22222111
Q ss_pred CCCCC-c-hhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhhhc
Q 042970 85 FDMLP-S-IDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLHILRDS 162 (489)
Q Consensus 85 ~~~~~-~-~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~~~ 162 (489)
..... . ...+..+........+.+.+++++ .+||+||+|.+.+|+..+|+++|||++.+++.+.............
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 153 (424)
T 2iya_A 76 EESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV 153 (424)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc
Confidence 00001 1 122333334444556778888887 8999999999888999999999999999987664211100000000
Q ss_pred ccCCCCCCCCccccCC-CCCCCccccccCCCCCCCCChHHHHHHHH----------HhcccCcEEEecChhhhhhHHHHH
Q 042970 163 KVHENVTSDSEYFKVP-GLPDQIEFTKVQLPIFPSDDMKDINEQML----------AADKKTFGIIINTVEELESAYFRE 231 (489)
Q Consensus 163 ~~~~~~~~~~~~~~~p-~~p~~~~~~~~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~t~~~l~~~~~~~ 231 (489)
........... ..| +......+. ...+.. ..+.+...... .....++.++.++...++++
T Consensus 154 -~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~---- 224 (424)
T 2iya_A 154 -QDPTADRGEEA-AAPAGTGDAEEGA-EAEDGL--VRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK---- 224 (424)
T ss_dssp -SCCCC-----------------------HHHH--HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT----
T ss_pred -ccccccccccc-ccccccccchhhh-ccchhH--HHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC----
Confidence 00000000000 000 000000000 000000 00000111111 11124567888888888754
Q ss_pred HHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCC
Q 042970 232 YKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKP 311 (489)
Q Consensus 232 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~ 311 (489)
...+++++++|||++... .+..+|++..+++++|||++||......+.+.++++++++.+++
T Consensus 225 -~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 286 (424)
T 2iya_A 225 -GDTVGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWH 286 (424)
T ss_dssp -GGGCCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSE
T ss_pred -ccCCCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcE
Confidence 245678899999975421 12345776655678999999999865677888899999988999
Q ss_pred EEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCcc
Q 042970 312 FIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQ 391 (489)
Q Consensus 312 ~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 391 (489)
++|.++.......+.. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||
T Consensus 287 ~~~~~g~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ 353 (424)
T 2iya_A 287 VVLSVGRFVDPADLGE-----------VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQ 353 (424)
T ss_dssp EEEECCTTSCGGGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHH
T ss_pred EEEEECCcCChHHhcc-----------CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccch
Confidence 9998876542211111 1569999999999999999998 99999999999999999999999999999
Q ss_pred hhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHH
Q 042970 392 FCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKR 461 (489)
Q Consensus 392 ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~ 461 (489)
+.||+++ ++.|+|+.++.. .+++++|.++|+++|+|+ .|+++++++++++++
T Consensus 354 ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 354 TMNAERI-VELGLGRHIPRD-------------QVTAEKLREAVLAVASDP----GVAERLAAVRQEIRE 405 (424)
T ss_dssp HHHHHHH-HHTTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT
T ss_pred HHHHHHH-HHCCCEEEcCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 9999999 599999999766 689999999999999987 899999999998763
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=5.2e-45 Score=363.77 Aligned_cols=369 Identities=16% Similarity=0.116 Sum_probs=233.4
Q ss_pred CCCC---CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccC-
Q 042970 1 MASE---ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEA- 76 (489)
Q Consensus 1 m~~~---~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 76 (489)
|+++ -+.|||||+++|++||++|+++||++|++|||+|+|++++...+.. . .++.+..+.......
T Consensus 13 ~g~~~~~~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~---------~g~~~~~~~~~~~~~~ 82 (400)
T 4amg_A 13 LGTENLYFQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E---------AGLCAVDVSPGVNYAK 82 (400)
T ss_dssp --------CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T---------TTCEEEESSTTCCSHH
T ss_pred CCcccCCCCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h---------cCCeeEecCCchhHhh
Confidence 4555 3579999999999999999999999999999999999988554321 1 267777654211110
Q ss_pred -CCCCCCCCCCCC----Cch-hhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchH
Q 042970 77 -GLPQGCENFDML----PSI-DLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSC 150 (489)
Q Consensus 77 -~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~ 150 (489)
..+......... ... .....+..........+.+++++ .+||+||+|.+++++..+|+.+|||++.+.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~ 160 (400)
T 4amg_A 83 LFVPDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPA 160 (400)
T ss_dssp HHSCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred hccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence 001110000000 001 11222223333455667777888 8999999999999999999999999998765443
Q ss_pred HHHHHHhhhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHh----cccCcEE-EecChhhhh
Q 042970 151 FCLFCLHILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAA----DKKTFGI-IINTVEELE 225 (489)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~-l~~t~~~l~ 225 (489)
.......... .+........ ....... .......+.
T Consensus 161 ~~~~~~~~~~---------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (400)
T 4amg_A 161 DSEPGLGALI---------------------------------------RRAMSKDYERHGVTGEPTGSVRLTTTPPSVE 201 (400)
T ss_dssp TCCHHHHHHH---------------------------------------HHHTHHHHHHTTCCCCCSCEEEEECCCHHHH
T ss_pred ccccchhhHH---------------------------------------HHHHHHHHHHhCCCcccccchhhcccCchhh
Confidence 2111110000 0000000000 0001111 111111000
Q ss_pred hHHHHHHHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCC--HHHHHHHHH
Q 042970 226 SAYFREYKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLT--SSQLIELGL 303 (489)
Q Consensus 226 ~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~--~~~~~~~~~ 303 (489)
. ........+....+.+.... ....+.+|++..+++++||||+||+...+ .+.+.++++
T Consensus 202 ~---~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~ 262 (400)
T 4amg_A 202 A---LLPEDRRSPGAWPMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFS 262 (400)
T ss_dssp H---TSCGGGCCTTCEECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHH
T ss_pred c---cCcccccCCcccCccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHH
Confidence 0 00000111222222222111 13445678888888899999999987644 356788999
Q ss_pred HHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEe
Q 042970 304 GLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQML 383 (489)
Q Consensus 304 al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l 383 (489)
++++.+.+++|..++..... . . ..++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|
T Consensus 263 ~l~~~~~~~v~~~~~~~~~~------~-~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v 328 (400)
T 4amg_A 263 EVADVDAEFVLTLGGGDLAL------L-G-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQC 328 (400)
T ss_dssp HGGGSSSEEEEECCTTCCCC------C-C-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEE
T ss_pred HhhccCceEEEEecCccccc------c-c-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEE
Confidence 99999999999987654221 1 1 11579999999999999999998 999999999999999999999
Q ss_pred ecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHH
Q 042970 384 TWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRAL 463 (489)
Q Consensus 384 ~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~ 463 (489)
++|++.||+.||+++ ++.|+|+.++.. ..+++ +|+++|+|+ +||+||+++++++++.
T Consensus 329 ~~P~~~dQ~~na~~v-~~~G~g~~l~~~-------------~~~~~----al~~lL~d~----~~r~~a~~l~~~~~~~- 385 (400)
T 4amg_A 329 VIPHGSYQDTNRDVL-TGLGIGFDAEAG-------------SLGAE----QCRRLLDDA----GLREAALRVRQEMSEM- 385 (400)
T ss_dssp ECCC---CHHHHHHH-HHHTSEEECCTT-------------TCSHH----HHHHHHHCH----HHHHHHHHHHHHHHTS-
T ss_pred EecCcccHHHHHHHH-HHCCCEEEcCCC-------------CchHH----HHHHHHcCH----HHHHHHHHHHHHHHcC-
Confidence 999999999999999 599999999766 56654 667788888 9999999999998744
Q ss_pred hhCCChHHHHHHHHHHH
Q 042970 464 EEGGSSYNNIQLFFQDI 480 (489)
Q Consensus 464 ~~gg~~~~~~~~~~~~~ 480 (489)
.|. ..+.+.|+.|
T Consensus 386 --~~~--~~~a~~le~l 398 (400)
T 4amg_A 386 --PPP--AETAAXLVAL 398 (400)
T ss_dssp --CCH--HHHHHHHHHH
T ss_pred --CCH--HHHHHHHHHh
Confidence 433 4444555544
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.8e-41 Score=338.23 Aligned_cols=384 Identities=13% Similarity=0.114 Sum_probs=249.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFDM 87 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (489)
|||+|++.|+.||++|+++||++|++|||+|+|++++...+.+... +++|+.++.... +.......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~-----~~~~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSAR-----APIQRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHH-----HHhhcccc
Confidence 6899999999999999999999999999999999988654444332 789988874311 11000010
Q ss_pred CCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECC-CCcc--hHHHHHHcCCCcEEEecchHHHHHHHhhhhhccc
Q 042970 88 LPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDM-GYPW--TVDTAAKFNVPRIVFHGFSCFCLFCLHILRDSKV 164 (489)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~-~~~~--~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~~~~~ 164 (489)
........+.. ......+.++.+. ..+||+||+|. +..+ +..+|+++|||++.+++.+.+...
T Consensus 67 -~~~~~~~~~~~--~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~---------- 132 (415)
T 1iir_A 67 -LTAEDVRRFTT--EAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS---------- 132 (415)
T ss_dssp -CCHHHHHHHHH--HHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC----------
T ss_pred -cchHHHHHHHH--HHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC----------
Confidence 11111111111 1122334444431 27999999998 5668 899999999999999877644210
Q ss_pred CCCCCCCCccccCCCCCCCccccccCCC--CCCC---CChHHHHHHHHH------------hcccCcEEEecChhhhhh-
Q 042970 165 HENVTSDSEYFKVPGLPDQIEFTKVQLP--IFPS---DDMKDINEQMLA------------ADKKTFGIIINTVEELES- 226 (489)
Q Consensus 165 ~~~~~~~~~~~~~p~~p~~~~~~~~~l~--~~~~---~~~~~~~~~~~~------------~~~~~~~~l~~t~~~l~~- 226 (489)
...+...... .++.. .....+. +... ..+........+ ..... .++.++.+.+++
T Consensus 133 -~~~p~~~~~~---~~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~ 205 (415)
T 1iir_A 133 -PYYPPPPLGE---PSTQD--TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL 205 (415)
T ss_dssp -SSSCCCC--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC
T ss_pred -cccCCccCCc---cccch--HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC
Confidence 0000000000 01000 0000000 0000 000000011110 11122 467778777764
Q ss_pred HHHHHHHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHH
Q 042970 227 AYFREYKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLE 306 (489)
Q Consensus 227 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~ 306 (489)
+ +..+ ++++|||+...... ..+.++.+|++.+ +++|||++||+. ...+.+..++++++
T Consensus 206 ~-----~~~~--~~~~vG~~~~~~~~------------~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~ 263 (415)
T 1iir_A 206 Q-----PTDL--DAVQTGAWILPDER------------PLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIR 263 (415)
T ss_dssp C-----CCSS--CCEECCCCCCCCCC------------CCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHH
T ss_pred C-----cccC--CeEeeCCCccCccc------------CCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHH
Confidence 2 1112 78999998754221 1357889999865 368999999987 45667778999999
Q ss_pred hCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecC
Q 042970 307 ASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWP 386 (489)
Q Consensus 307 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 386 (489)
..+.+++|+++..... ... + ++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|
T Consensus 264 ~~~~~~v~~~g~~~~~--~~~--~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p 328 (415)
T 1iir_A 264 AHGRRVILSRGWADLV--LPD--D---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLP 328 (415)
T ss_dssp HTTCCEEECTTCTTCC--CSS--C---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECC
T ss_pred HCCCeEEEEeCCCccc--ccC--C---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECC
Confidence 9999999998754321 001 1 358999999999999988888 999999999999999999999999
Q ss_pred CcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhC
Q 042970 387 LFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEG 466 (489)
Q Consensus 387 ~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~g 466 (489)
+..||+.||+++ ++.|+|+.++.. .+++++|.++|+++ +|+ +|+++++++++++++
T Consensus 329 ~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~----- 384 (415)
T 1iir_A 329 QMADQPYYAGRV-AELGVGVAHDGP-------------IPTFDSLSAALATA-LTP----ETHARATAVAGTIRT----- 384 (415)
T ss_dssp CSTTHHHHHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSCS-----
T ss_pred CCCccHHHHHHH-HHCCCcccCCcC-------------CCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHhh-----
Confidence 999999999999 699999999766 68999999999999 887 899999999988752
Q ss_pred CChHHHHHHHHHHHHcCCCCC
Q 042970 467 GSSYNNIQLFFQDIMQQPTSE 487 (489)
Q Consensus 467 g~~~~~~~~~~~~~~~~~~~~ 487 (489)
..+...+.+.|+++.+++..+
T Consensus 385 ~~~~~~~~~~i~~~~~~~~~~ 405 (415)
T 1iir_A 385 DGAAVAARLLLDAVSREKPTV 405 (415)
T ss_dssp CHHHHHHHHHHHHHHTC----
T ss_pred cChHHHHHHHHHHHHhcccHH
Confidence 233455566666666665443
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.3e-40 Score=333.69 Aligned_cols=378 Identities=14% Similarity=0.110 Sum_probs=259.8
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCC--
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCE-- 83 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-- 83 (489)
.++||+|++.++.||++|+++||++|+++||+|+|++++...+.+... ++.++.++.. ++....
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~-----~~~~~~~~ 84 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSE-----IIDADAAE 84 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCS-----TTTCCHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEecccc-----ccccccch
Confidence 468999999999999999999999999999999999988666655443 7888887632 111100
Q ss_pred -CCCCCCchhhHHH-HHHHHhhchHHHHHHHhhcCCCCcEEEEC-CCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhh
Q 042970 84 -NFDMLPSIDLASK-FFNSHSMLQLPFENLFSEQSPKPCCIISD-MGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLHILR 160 (489)
Q Consensus 84 -~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~~~D~VI~D-~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~ 160 (489)
...... ...+.. +..........+.+++++ .+||+||+| ...+++..+|+++|||++.+.+....... +....
T Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~ 160 (415)
T 3rsc_A 85 VFGSDDL-GVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQ 160 (415)
T ss_dssp HHHSSSS-CHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHH
T ss_pred hhccccH-HHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-ccccc
Confidence 000011 122222 334444556778888888 899999999 77778999999999999997643321000 00000
Q ss_pred hcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHh----------c-ccCcEEEecChhhhhhHHH
Q 042970 161 DSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAA----------D-KKTFGIIINTVEELESAYF 229 (489)
Q Consensus 161 ~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------~-~~~~~~l~~t~~~l~~~~~ 229 (489)
. ......+..|.. . ..+...+...... . ...+..+..+...++
T Consensus 161 ~----------~~~~~~~~~p~~--------~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~---- 214 (415)
T 3rsc_A 161 D----------MVTLAGTIDPLD--------L----PVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ---- 214 (415)
T ss_dssp H----------HHHHHTCCCGGG--------C----HHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS----
T ss_pred c----------cccccccCChhh--------H----HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC----
Confidence 0 000000000000 0 0000011111000 1 111444444433333
Q ss_pred HHHHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhCC
Q 042970 230 REYKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASK 309 (489)
Q Consensus 230 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~ 309 (489)
++...++.++.++||..... .+...|....+++++|||++||......+.+..+++++++.+
T Consensus 215 -~~~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~ 276 (415)
T 3rsc_A 215 -IAGDTFDDRFVFVGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP 276 (415)
T ss_dssp -TTGGGCCTTEEECCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS
T ss_pred -CCcccCCCceEEeCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCC
Confidence 23455667899999976432 223446554556789999999998766777888999999989
Q ss_pred CCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcC
Q 042970 310 KPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFG 389 (489)
Q Consensus 310 ~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 389 (489)
++++|.++.+...+.+.. .++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...
T Consensus 277 ~~~v~~~g~~~~~~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~ 343 (415)
T 3rsc_A 277 WHVVMTLGGQVDPAALGD-----------LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSF 343 (415)
T ss_dssp CEEEEECTTTSCGGGGCC-----------CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSG
T ss_pred cEEEEEeCCCCChHHhcC-----------CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcc
Confidence 999998876533222211 1569999999999999999999 999999999999999999999999999
Q ss_pred cchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCCh
Q 042970 390 DQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSS 469 (489)
Q Consensus 390 DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~ 469 (489)
||+.||.++ ++.|+|+.+... .++++.|.++|+++|+|+ .++++++++++.+.+ +++.
T Consensus 344 ~q~~~a~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~----~~~~ 401 (415)
T 3rsc_A 344 DVQPMARRV-DQLGLGAVLPGE-------------KADGDTLLAAVGAVAADP----ALLARVEAMRGHVRR----AGGA 401 (415)
T ss_dssp GGHHHHHHH-HHHTCEEECCGG-------------GCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHH----SCHH
T ss_pred hHHHHHHHH-HHcCCEEEcccC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh----cCHH
Confidence 999999999 599999999776 689999999999999998 899999999988753 3454
Q ss_pred HHHHHHHHHHH
Q 042970 470 YNNIQLFFQDI 480 (489)
Q Consensus 470 ~~~~~~~~~~~ 480 (489)
.+.++.+.+.+
T Consensus 402 ~~~~~~i~~~~ 412 (415)
T 3rsc_A 402 ARAADAVEAYL 412 (415)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 55555554443
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.8e-40 Score=332.56 Aligned_cols=386 Identities=14% Similarity=0.097 Sum_probs=251.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFDM 87 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (489)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+... |++|+.++..... .... . ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~-~~~~-~--~~- 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHM-MLQE-G--MP- 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGG-CCCT-T--SC-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHH-HHhh-c--cc-
Confidence 6899999999999999999999999999999999988655555444 7899888743111 1111 0 00
Q ss_pred CCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECC-CCcc--hHHHHHHcCCCcEEEecchHHHHHHHhhhhhccc
Q 042970 88 LPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDM-GYPW--TVDTAAKFNVPRIVFHGFSCFCLFCLHILRDSKV 164 (489)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~-~~~~--~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~~~~~ 164 (489)
.........+... .....++.+.+. ..+||+||+|. +.++ +..+|+.+|||++.+.+.+.+...
T Consensus 67 ~~~~~~~~~~~~~--~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~---------- 133 (416)
T 1rrv_A 67 PPPPEEEQRLAAM--TVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS---------- 133 (416)
T ss_dssp CCCHHHHHHHHHH--HHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC----------
T ss_pred cchhHHHHHHHHH--HHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC----------
Confidence 0111111111111 112222222211 26999999997 4456 889999999999998876643210
Q ss_pred CCCCCCCCccccC-CC-CCCCccccccCCCCCCCCChHHHHHHHH------------HhcccCcEEEecChhhhhhHHHH
Q 042970 165 HENVTSDSEYFKV-PG-LPDQIEFTKVQLPIFPSDDMKDINEQML------------AADKKTFGIIINTVEELESAYFR 230 (489)
Q Consensus 165 ~~~~~~~~~~~~~-p~-~p~~~~~~~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~t~~~l~~~~~~ 230 (489)
...+ +...... ++ +.+.+....... ..+. .+......+. +..... .++.++...++++.
T Consensus 134 -~~~p-~~~~~~~~~~r~~n~~~~~~~~~-~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-- 206 (416)
T 1rrv_A 134 -PHLP-PAYDEPTTPGVTDIRVLWEERAA-RFAD-RYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ-- 206 (416)
T ss_dssp -SSSC-CCBCSCCCTTCCCHHHHHHHHHH-HHHH-HHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC--
T ss_pred -cccC-CCCCCCCCchHHHHHHHHHHHHH-HHHH-HhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC--
Confidence 0000 0000000 11 000000000000 0000 0000000111 111223 57788888777531
Q ss_pred HHHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCccc-CCHHHHHHHHHHHHhCC
Q 042970 231 EYKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICN-LTSSQLIELGLGLEASK 309 (489)
Q Consensus 231 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~-~~~~~~~~~~~al~~~~ 309 (489)
.. .++++|||+...... ..+.++.+|++.+ +++|||++||... ...+.+.+++++++..+
T Consensus 207 ---~~--~~~~~vG~~~~~~~~------------~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~ 267 (416)
T 1rrv_A 207 ---PD--VDAVQTGAWLLSDER------------PLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQG 267 (416)
T ss_dssp ---SS--CCCEECCCCCCCCCC------------CCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTT
T ss_pred ---CC--CCeeeECCCccCccC------------CCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCC
Confidence 11 278999998764221 1357889999765 3689999999865 33456778999999999
Q ss_pred CCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcC
Q 042970 310 KPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFG 389 (489)
Q Consensus 310 ~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 389 (489)
++++|+++..... ... + ++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..
T Consensus 268 ~~~v~~~g~~~~~--~~~--~---------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 332 (416)
T 1rrv_A 268 RRVILSRGWTELV--LPD--D---------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNT 332 (416)
T ss_dssp CCEEEECTTTTCC--CSC--C---------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSB
T ss_pred CeEEEEeCCcccc--ccC--C---------CCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCC
Confidence 9999998765321 001 1 569999999999999988888 999999999999999999999999999
Q ss_pred cchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCCh
Q 042970 390 DQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSS 469 (489)
Q Consensus 390 DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~ 469 (489)
||+.||+++ ++.|+|+.++.. ..++++|.++|+++ +|+ +|+++++++++++++ .++.
T Consensus 333 dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~~----~~~~ 389 (416)
T 1rrv_A 333 DQPYFAGRV-AALGIGVAHDGP-------------TPTFESLSAALTTV-LAP----ETRARAEAVAGMVLT----DGAA 389 (416)
T ss_dssp THHHHHHHH-HHHTSEEECSSS-------------CCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCCC----CHHH
T ss_pred CcHHHHHHH-HHCCCccCCCCC-------------CCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHhh----cCcH
Confidence 999999999 599999998765 68999999999999 887 999999999888762 3333
Q ss_pred HHHHHHHHHHHHcCCC
Q 042970 470 YNNIQLFFQDIMQQPT 485 (489)
Q Consensus 470 ~~~~~~~~~~~~~~~~ 485 (489)
+.++.+++++.+...
T Consensus 390 -~~~~~i~e~~~~~~~ 404 (416)
T 1rrv_A 390 -AAADLVLAAVGREKP 404 (416)
T ss_dssp -HHHHHHHHHHHC---
T ss_pred -HHHHHHHHHHhccCC
Confidence 444444366665554
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=9.2e-40 Score=325.95 Aligned_cols=393 Identities=15% Similarity=0.159 Sum_probs=257.9
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCEN 84 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (489)
|+++||+|++.++.||++|++.||++|+++||+|+|++++...+.+... |++++.++..... ......
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~---~~~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDT---FHVPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGT---SSSSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEeccccccc---cccccc
Confidence 4456999999999999999999999999999999999987555444333 7888887642111 000000
Q ss_pred CCCCCchhhHHH-HHHHHhhchHHHHHHHhhcCCCCcEEEEC-CCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhhhc
Q 042970 85 FDMLPSIDLASK-FFNSHSMLQLPFENLFSEQSPKPCCIISD-MGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLHILRDS 162 (489)
Q Consensus 85 ~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~~~D~VI~D-~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~~~ 162 (489)
............ +..........+.+++++ .+||+||+| .+.+++..+|+++|||++.+.+....... +.....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~- 145 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKE- 145 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHH-
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccccc-
Confidence 111111122222 333444556778888888 899999999 77778999999999999997643321100 000000
Q ss_pred ccCCCCCCCCccccCCCCCCCccccccCCC-CCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcCCceE
Q 042970 163 KVHENVTSDSEYFKVPGLPDQIEFTKVQLP-IFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQGKVW 241 (489)
Q Consensus 163 ~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~~~~~ 241 (489)
.........|.........+. ++...+.......+. ....+..+..+-.+++ .....++.++.
T Consensus 146 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~l~~~~~~~~-----~~~~~~~~~~~ 209 (402)
T 3ia7_A 146 ---------LWKSNGQRHPADVEAVHSVLVDLLGKYGVDTPVKEYW--DEIEGLTIVFLPKSFQ-----PFAETFDERFA 209 (402)
T ss_dssp ---------HHHHHTCCCGGGSHHHHHHHHHHHHTTTCCSCHHHHH--TCCCSCEEESSCGGGS-----TTGGGCCTTEE
T ss_pred ---------ccccccccChhhHHHHHHHHHHHHHHcCCCCChhhhh--cCCCCeEEEEcChHhC-----CccccCCCCeE
Confidence 000000000000000000000 000000000000000 0111334444433333 23445667899
Q ss_pred EeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCc
Q 042970 242 CIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNK 321 (489)
Q Consensus 242 ~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~ 321 (489)
++||..... .+...|+...+++++|||++||......+.+..+++++++.+.+++|.++.+..
T Consensus 210 ~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 272 (402)
T 3ia7_A 210 FVGPTLTGR-----------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLD 272 (402)
T ss_dssp ECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSC
T ss_pred EeCCCCCCc-----------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCC
Confidence 999976432 223345554556789999999998777778888999999889999998886533
Q ss_pred hhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCC-cCcchhhHHHHHH
Q 042970 322 LEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL-FGDQFCNEKLIVE 400 (489)
Q Consensus 322 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~v~e 400 (489)
...+.+ .++|+++.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|. ..||+.|+.++ +
T Consensus 273 ~~~~~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~-~ 338 (402)
T 3ia7_A 273 PAVLGP-----------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERV-I 338 (402)
T ss_dssp GGGGCS-----------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHH-H
T ss_pred hhhhCC-----------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHH-H
Confidence 222211 1569999999999999999998 9999999999999999999999999 99999999999 5
Q ss_pred HhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 042970 401 VLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSSYNNIQLFFQDI 480 (489)
Q Consensus 401 ~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~ 480 (489)
+.|+|+.+... .++++.|.++|+++|+|+ .++++++++++.+. +++++.+.++.+.+.+
T Consensus 339 ~~g~g~~~~~~-------------~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 339 ELGLGSVLRPD-------------QLEPASIREAVERLAADS----AVRERVRRMQRDIL----SSGGPARAADEVEAYL 397 (402)
T ss_dssp HTTSEEECCGG-------------GCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH----TSCHHHHHHHHHHHHH
T ss_pred HcCCEEEccCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHh----hCChHHHHHHHHHHHH
Confidence 99999999776 689999999999999998 89999999888865 3445555555554444
Q ss_pred H
Q 042970 481 M 481 (489)
Q Consensus 481 ~ 481 (489)
.
T Consensus 398 ~ 398 (402)
T 3ia7_A 398 G 398 (402)
T ss_dssp H
T ss_pred h
Confidence 3
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=5.3e-40 Score=327.48 Aligned_cols=376 Identities=15% Similarity=0.064 Sum_probs=246.8
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFDM 87 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (489)
|||+|++.++.||++|+++||++|++|||+|+|++++...+.+... ++.|+.++..... . .+.....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~--~-~~~~~~~- 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRA--G-AREPGEL- 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSG--G-GSCTTCC-
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHH--H-hccccCC-
Confidence 6899999999999999999999999999999999988655544433 7899888643221 0 0000000
Q ss_pred CCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcch---HHHHHHcCCCcEEEecchHHHHHHHhhh-hhc-
Q 042970 88 LPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWT---VDTAAKFNVPRIVFHGFSCFCLFCLHIL-RDS- 162 (489)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~---~~~A~~lgIP~v~l~~~~~~~~~~~~~~-~~~- 162 (489)
.......+..........+.+++ .+||+||+|.....+ ..+|+++|||++.+.+++........+. ...
T Consensus 68 --~~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~ 141 (404)
T 3h4t_A 68 --PPGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMY 141 (404)
T ss_dssp --CTTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHH
Confidence 00111122222333333444433 379999998765433 7899999999999877665211000000 000
Q ss_pred --ccCCCCCCC-CccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcCCc
Q 042970 163 --KVHENVTSD-SEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQGK 239 (489)
Q Consensus 163 --~~~~~~~~~-~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~~~ 239 (489)
......... +....--++++ ... ..... ..+..+.+....+.+. ..++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~lgl~~-------------~~~---~~~~~-----~~~~~l~~~~~~l~p~------~~~~~~ 194 (404)
T 3h4t_A 142 NQGADRLFGDAVNSHRASIGLPP-------------VEH---LYDYG-----YTDQPWLAADPVLSPL------RPTDLG 194 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-------------CCC---HHHHH-----HCSSCEECSCTTTSCC------CTTCCS
T ss_pred HHHHHHHhHHHHHHHHHHcCCCC-------------Ccc---hhhcc-----ccCCeEEeeCcceeCC------CCCCCC
Confidence 000000000 00000000100 000 00000 0111233444444322 234467
Q ss_pred eEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecC
Q 042970 240 VWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVG 319 (489)
Q Consensus 240 ~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~ 319 (489)
+.++|+++.+... ..++++.+|++.. +++||||+||+.. ..+.+..+++++++.++++||.++..
T Consensus 195 ~~~~G~~~~~~~~------------~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~ 259 (404)
T 3h4t_A 195 TVQTGAWILPDQR------------PLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWA 259 (404)
T ss_dssp CCBCCCCCCCCCC------------CCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTT
T ss_pred eEEeCccccCCCC------------CCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 8888977554321 1367888998753 4689999999987 66678889999999999999998764
Q ss_pred CchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCcchhhHHHHH
Q 042970 320 NKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIV 399 (489)
Q Consensus 320 ~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 399 (489)
.... +. .++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..||+.||.++
T Consensus 260 ~~~~------~~-------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~- 323 (404)
T 3h4t_A 260 GLGR------ID-------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV- 323 (404)
T ss_dssp TCCC------SS-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-
T ss_pred cccc------cc-------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHH-
Confidence 3210 11 1579999999999999999888 999999999999999999999999999999999999
Q ss_pred HHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 042970 400 EVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSSYNNIQLFFQD 479 (489)
Q Consensus 400 e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 479 (489)
++.|+|+.++.. .+++++|.++|+++++ + +|+++++++++.+. + ++..+.++.+.+.
T Consensus 324 ~~~G~g~~l~~~-------------~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~ 380 (404)
T 3h4t_A 324 ADLGVGVAHDGP-------------TPTVESLSAALATALT-P----GIRARAAAVAGTIR----T-DGTTVAAKLLLEA 380 (404)
T ss_dssp HHHTSEEECSSS-------------SCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC----C-CHHHHHHHHHHHH
T ss_pred HHCCCEeccCcC-------------CCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh----h-hHHHHHHHHHHHH
Confidence 599999999766 6899999999999998 7 89999999998865 2 3445555555555
Q ss_pred HHcC
Q 042970 480 IMQQ 483 (489)
Q Consensus 480 ~~~~ 483 (489)
+.+.
T Consensus 381 ~~~~ 384 (404)
T 3h4t_A 381 ISRQ 384 (404)
T ss_dssp HHC-
T ss_pred HhhC
Confidence 5443
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.6e-39 Score=325.76 Aligned_cols=382 Identities=18% Similarity=0.195 Sum_probs=250.1
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQ 80 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (489)
|...|+++||+|++.++.||++|++.||++|+++||+|++++++...+.+.+ .+++++.++.. .+.
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~-----~~~ 66 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHST-----LPG 66 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCC-----SCC
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCc-----Ccc
Confidence 7777888899999999999999999999999999999999998865443322 27888876631 111
Q ss_pred CCCCCC--CCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhh
Q 042970 81 GCENFD--MLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLHI 158 (489)
Q Consensus 81 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~ 158 (489)
...... ..........+..........+.+++++ .+||+||+|.+.+++..+|+.+|||++.+++...........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 144 (430)
T 2iyf_A 67 PDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEE 144 (430)
T ss_dssp TTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHH
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccc
Confidence 111000 0011122222223334456677888888 899999999877789999999999999987654210000000
Q ss_pred hhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHH----------HhcccCcEEEecChhhhhhHH
Q 042970 159 LRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQML----------AADKKTFGIIINTVEELESAY 228 (489)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~t~~~l~~~~ 228 (489)
+.... .. .....+++.. +.....+.. .....++.++.++...++..
T Consensus 145 ~~~~~-~~------~~~~~~~~~~----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~- 200 (430)
T 2iyf_A 145 VAEPM-WR------EPRQTERGRA----------------YYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH- 200 (430)
T ss_dssp THHHH-HH------HHHHSHHHHH----------------HHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-
T ss_pred cccch-hh------hhccchHHHH----------------HHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-
Confidence 00000 00 0000000000 000001110 11124567888887777643
Q ss_pred HHHHHhhcCCc-eEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHh
Q 042970 229 FREYKNAKQGK-VWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA 307 (489)
Q Consensus 229 ~~~~~~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~ 307 (489)
...++++ +++|||.+.... +...|.+..+++++||+++||+.....+.+.+++++++.
T Consensus 201 ----~~~~~~~~v~~vG~~~~~~~-----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~ 259 (430)
T 2iyf_A 201 ----ADRVDEDVYTFVGACQGDRA-----------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGN 259 (430)
T ss_dssp ----GGGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTT
T ss_pred ----cccCCCccEEEeCCcCCCCC-----------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhc
Confidence 1345567 999998653211 122455544567899999999985456778889999988
Q ss_pred C-CCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecC
Q 042970 308 S-KKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWP 386 (489)
Q Consensus 308 ~-~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 386 (489)
. +++++|.++.+.....+.. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|
T Consensus 260 ~~~~~~~~~~G~~~~~~~l~~-----------~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p 326 (430)
T 2iyf_A 260 LPGWHLVLQIGRKVTPAELGE-----------LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVP 326 (430)
T ss_dssp CTTEEEEEECC---CGGGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred CCCeEEEEEeCCCCChHHhcc-----------CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECC
Confidence 5 8889888876432211111 1469999999999999999998 999999999999999999999999
Q ss_pred CcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhC
Q 042970 387 LFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEG 466 (489)
Q Consensus 387 ~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~g 466 (489)
...||+.|+.++ ++.|+|+.++.. .++++.|.++|.++++|+ .+++++++++..+.+. +
T Consensus 327 ~~~~q~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~---~ 385 (430)
T 2iyf_A 327 QAVDQFGNADML-QGLGVARKLATE-------------EATADLLRETALALVDDP----EVARRLRRIQAEMAQE---G 385 (430)
T ss_dssp CSHHHHHHHHHH-HHTTSEEECCCC--------------CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHH---C
T ss_pred CccchHHHHHHH-HHcCCEEEcCCC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhc---C
Confidence 999999999999 599999998765 689999999999999987 8888888888877643 3
Q ss_pred CChHHHHHHHHH
Q 042970 467 GSSYNNIQLFFQ 478 (489)
Q Consensus 467 g~~~~~~~~~~~ 478 (489)
+..+.++.+.+
T Consensus 386 -~~~~~~~~i~~ 396 (430)
T 2iyf_A 386 -GTRRAADLIEA 396 (430)
T ss_dssp -HHHHHHHHHHT
T ss_pred -cHHHHHHHHHH
Confidence 33444444433
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.5e-38 Score=320.88 Aligned_cols=382 Identities=13% Similarity=0.063 Sum_probs=237.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCC-C
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGC-E 83 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~ 83 (489)
..+|||+|++.|+.||++|+++||++|+++||+|+|++++...+.+... |++|+.++......++.... .
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhc
Confidence 3468999999999999999999999999999999999987554433332 78999886421000000000 0
Q ss_pred CC------CCC----C---chhhHHH----HHHHHh-----h-chHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCC
Q 042970 84 NF------DML----P---SIDLASK----FFNSHS-----M-LQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNV 140 (489)
Q Consensus 84 ~~------~~~----~---~~~~~~~----~~~~~~-----~-~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgI 140 (489)
.. ... + ....... +..... . ....+.+++++ .+||+||+|.+++++..+|+.+||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCC
Confidence 00 000 1 0111111 111111 1 44556666777 799999999987899999999999
Q ss_pred CcEEEecchHHHHHHHhhhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhccc--------
Q 042970 141 PRIVFHGFSCFCLFCLHILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKK-------- 212 (489)
Q Consensus 141 P~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------- 212 (489)
|++.+...+.........+... ....|.... .......+....+.+..
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-------------~~~~~~~l~~~~~~~g~~~~~~~~~ 222 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGL-----------LPDQPEEHR-------------EDPLAEWLTWTLEKYGGPAFDEEVV 222 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHH-----------GGGSCTTTC-------------CCHHHHHHHHHHHHTTCCCCCGGGT
T ss_pred CEEEEecCCCcchhhhhhhhhh-----------ccccccccc-------------cchHHHHHHHHHHHcCCCCCCcccc
Confidence 9999865543221111100000 000000000 00011122222211100
Q ss_pred -CcEEEecChhhhhhHHHHHHHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcc
Q 042970 213 -TFGIIINTVEELESAYFREYKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSIC 291 (489)
Q Consensus 213 -~~~~l~~t~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~ 291 (489)
.+..+..+...++++ ..++ . ..+++.... .+.++.+|++..+++++|||++||+.
T Consensus 223 ~~~~~l~~~~~~~~~~------~~~~-~-~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 223 VGQWTIDPAPAAIRLD------TGLK-T-VGMRYVDYN----------------GPSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp SCSSEEECSCGGGSCC------CCCC-E-EECCCCCCC----------------SSCCCCGGGSSCCSSCEEEEEC----
T ss_pred CCCeEEEecCccccCC------CCCC-C-CceeeeCCC----------------CCcccchHhhcCCCCCEEEEECCCCc
Confidence 112222222222210 0110 0 112221100 12456789886666789999999987
Q ss_pred cC---CHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccC
Q 042970 292 NL---TSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCG 368 (489)
Q Consensus 292 ~~---~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG 368 (489)
.. ..+.+..++++++..++++||.+++.... . +. ..++|+++.+|+||.++|+.+++ ||||||
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G 344 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE-G-----VA------NIPDNVRTVGFVPMHALLPTCAA--TVHHGG 344 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTTTTS-S-----CS------SCCSSEEECCSCCHHHHGGGCSE--EEECCC
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCcchh-h-----hc------cCCCCEEEecCCCHHHHHhhCCE--EEECCC
Confidence 63 23556778899998999999998754311 0 11 01569999999999999998888 999999
Q ss_pred hhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHH
Q 042970 369 WNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVR 448 (489)
Q Consensus 369 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~ 448 (489)
+||++||+++|||+|++|+..||+.||.++ ++.|+|+.++.. .++++.|.++|+++|+|+ +|
T Consensus 345 ~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~ 406 (441)
T 2yjn_A 345 PGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVP-------------ELTPDQLRESVKRVLDDP----AH 406 (441)
T ss_dssp HHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTT-------------TCCHHHHHHHHHHHHHCH----HH
T ss_pred HHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccc-------------cCCHHHHHHHHHHHhcCH----HH
Confidence 999999999999999999999999999999 599999999766 689999999999999988 99
Q ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHc
Q 042970 449 RKRAKEFEELAKRALEEGGSSYNNIQLFFQDIMQ 482 (489)
Q Consensus 449 ~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 482 (489)
+++++++++.+.+ .++..+.++ .|..+.+
T Consensus 407 ~~~~~~~~~~~~~----~~~~~~~~~-~i~~~~~ 435 (441)
T 2yjn_A 407 RAGAARMRDDMLA----EPSPAEVVG-ICEELAA 435 (441)
T ss_dssp HHHHHHHHHHHHT----SCCHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCHHHHHH-HHHHHHH
Confidence 9999999988763 334444444 4444443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.4e-37 Score=305.53 Aligned_cols=356 Identities=13% Similarity=0.043 Sum_probs=241.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccC---CCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEA---GLPQGCEN 84 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 84 (489)
|||++++.++.||++|+++||++|+++||+|+|++++...+.+... ++.++.++...... ........
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 5899999999999999999999999999999999987544333322 68888776321000 00000000
Q ss_pred CCCCCchhhH----HH-HHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhhh
Q 042970 85 FDMLPSIDLA----SK-FFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLHIL 159 (489)
Q Consensus 85 ~~~~~~~~~~----~~-~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~ 159 (489)
... ...... .. +..........+.+++++ .+||+||+|.+.+++..+|+.+|||++.+.+.+...
T Consensus 72 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~------- 141 (384)
T 2p6p_A 72 AIP-SDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA------- 141 (384)
T ss_dssp CCC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-------
T ss_pred ccC-cchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-------
Confidence 000 110111 11 112222345567777777 799999999887888999999999999875422100
Q ss_pred hhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhc-----ccCcEEEecChhhhhhHHHHHHHh
Q 042970 160 RDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAAD-----KKTFGIIINTVEELESAYFREYKN 234 (489)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~t~~~l~~~~~~~~~~ 234 (489)
..+.. ............. ..++.++.++...++++.
T Consensus 142 ------------------~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~------ 182 (384)
T 2p6p_A 142 ------------------DGIHP---------------GADAELRPELSELGLERLPAPDLFIDICPPSLRPAN------ 182 (384)
T ss_dssp ------------------TTTHH---------------HHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT------
T ss_pred ------------------chhhH---------------HHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC------
Confidence 00000 0000011111111 114567777776665321
Q ss_pred hcC-CceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccC-----CHHHHHHHHHHHHhC
Q 042970 235 AKQ-GKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNL-----TSSQLIELGLGLEAS 308 (489)
Q Consensus 235 ~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~-----~~~~~~~~~~al~~~ 308 (489)
.++ .++.+++. . .+.++.+|++..+++++|||++||.... ..+.+..+++++++.
T Consensus 183 ~~~~~~~~~~~~---~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~ 243 (384)
T 2p6p_A 183 AAPARMMRHVAT---S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW 243 (384)
T ss_dssp SCCCEECCCCCC---C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT
T ss_pred CCCCCceEecCC---C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC
Confidence 111 12333321 0 0234567887655567999999998864 346788899999999
Q ss_pred CCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCc
Q 042970 309 KKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF 388 (489)
Q Consensus 309 ~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 388 (489)
+++++|++++.. . +.+.. .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|..
T Consensus 244 ~~~~~~~~g~~~---------~-~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 244 DVELIVAAPDTV---------A-EALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp TCEEEEECCHHH---------H-HHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCS
T ss_pred CcEEEEEeCCCC---------H-HhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCc
Confidence 999999887421 1 11111 1579999 99999999999888 99999999999999999999999999
Q ss_pred CcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCC
Q 042970 389 GDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGS 468 (489)
Q Consensus 389 ~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~ 468 (489)
.||+.||.++ ++.|+|+.++.. ..++++|.++|+++|+|+ .++++++++++++++. ++
T Consensus 309 ~dq~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~~----~~ 366 (384)
T 2p6p_A 309 SVLEAPARRV-ADYGAAIALLPG-------------EDSTEAIADSCQELQAKD----TYARRAQDLSREISGM----PL 366 (384)
T ss_dssp HHHHHHHHHH-HHHTSEEECCTT-------------CCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHTS----CC
T ss_pred ccchHHHHHH-HHCCCeEecCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHhC----CC
Confidence 9999999999 599999998765 589999999999999988 8999999999988633 34
Q ss_pred hHHHHHHHH
Q 042970 469 SYNNIQLFF 477 (489)
Q Consensus 469 ~~~~~~~~~ 477 (489)
..+.++.+.
T Consensus 367 ~~~~~~~i~ 375 (384)
T 2p6p_A 367 PATVVTALE 375 (384)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.5e-36 Score=302.45 Aligned_cols=350 Identities=15% Similarity=0.105 Sum_probs=219.9
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCC---CCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGL---PQG 81 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~ 81 (489)
..+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.++.++.......+ ...
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhcc
Confidence 3469999999999999999999999999999999999987555444433 7888887632110000 000
Q ss_pred CCCCCCC-Cchh----hHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHH
Q 042970 82 CENFDML-PSID----LASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCLFCL 156 (489)
Q Consensus 82 ~~~~~~~-~~~~----~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~ 156 (489)
....... .... ....+..........+.+++++ ++||+||+|...+++..+|+.+|||++.+.+.........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 0000000 0001 1112222333455677888888 8999999999888899999999999998765432111000
Q ss_pred hhhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhc-----ccCcEEEecChhhhhhHHHHH
Q 042970 157 HILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAAD-----KKTFGIIINTVEELESAYFRE 231 (489)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~t~~~l~~~~~~~ 231 (489)
... ...+......+ ......+..+...+...
T Consensus 162 ~~~----------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 197 (398)
T 4fzr_A 162 SAG----------------------------------------VGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ---- 197 (398)
T ss_dssp HHH----------------------------------------HHHTHHHHHTTTCSSCCCCSEEEECSCGGGC------
T ss_pred HHH----------------------------------------HHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC----
Confidence 000 00000000000 01122222222222211
Q ss_pred HHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccC--------CHHHHHHHHH
Q 042970 232 YKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNL--------TSSQLIELGL 303 (489)
Q Consensus 232 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~--------~~~~~~~~~~ 303 (489)
.......+.++++.. ...++..|+...+++++|||++||.... ..+.+..+++
T Consensus 198 -~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 4fzr_A 198 -PKPGTTKMRYVPYNG------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQ 258 (398)
T ss_dssp ---CCCEECCCCCCCC------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHH
T ss_pred -CCCCCCCeeeeCCCC------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHH
Confidence 000000111221100 1234556766555677999999999753 3355788999
Q ss_pred HHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEe
Q 042970 304 GLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQML 383 (489)
Q Consensus 304 al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l 383 (489)
++++.+++++|+.++... ..+.. .++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|
T Consensus 259 al~~~~~~~v~~~~~~~~-~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v 324 (398)
T 4fzr_A 259 ELPKLGFEVVVAVSDKLA-QTLQP-----------LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQV 324 (398)
T ss_dssp HGGGGTCEEEECCCC--------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HHHhCCCEEEEEeCCcch-hhhcc-----------CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEE
Confidence 999899999998876431 11111 2579999999999999999999 999999999999999999999
Q ss_pred ecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 042970 384 TWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAK 460 (489)
Q Consensus 384 ~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 460 (489)
++|...||+.|+.++ ++.|+|+.++.. ..+++.|.++|+++|+|+ .+++++++.+..+.
T Consensus 325 ~~p~~~~q~~~a~~~-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 325 SVPVIAEVWDSARLL-HAAGAGVEVPWE-------------QAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp ECCCSGGGHHHHHHH-HHTTSEEECC--------------------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred ecCCchhHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 999999999999999 599999999776 689999999999999999 99999999888865
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.6e-35 Score=294.86 Aligned_cols=363 Identities=15% Similarity=0.117 Sum_probs=236.3
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCC----
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQ---- 80 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---- 80 (489)
.++|||+|++.++.||++|++.||++|+++||+|+++++ ...+.+... ++.++.++..........
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhccc
Confidence 346899999999999999999999999999999999998 555444433 788888763210000000
Q ss_pred CCC-------CCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHH
Q 042970 81 GCE-------NFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCL 153 (489)
Q Consensus 81 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~ 153 (489)
... .............+..........+.+++++ ++||+||+|...+++..+|+.+|||++...+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~ 165 (398)
T 3oti_A 88 DNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD--YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR 165 (398)
T ss_dssp HCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT
T ss_pred CCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc
Confidence 000 0000011122333344455677788888998 8999999998888899999999999998653321100
Q ss_pred HHHhhhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHH
Q 042970 154 FCLHILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYK 233 (489)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~ 233 (489)
.... .+.. .......+..-........+..+...+..+ .
T Consensus 166 ~~~~---------------------~~~~---------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 204 (398)
T 3oti_A 166 GMHR---------------------SIAS---------------FLTDLMDKHQVSLPEPVATIESFPPSLLLE-----A 204 (398)
T ss_dssp THHH---------------------HHHT---------------TCHHHHHHTTCCCCCCSEEECSSCGGGGTT-----S
T ss_pred chhh---------------------HHHH---------------HHHHHHHHcCCCCCCCCeEEEeCCHHHCCC-----C
Confidence 0000 0000 000111110000011122222222222210 0
Q ss_pred hhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccC--CHHHHHHHHHHHHhCCCC
Q 042970 234 NAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNL--TSSQLIELGLGLEASKKP 311 (489)
Q Consensus 234 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~--~~~~~~~~~~al~~~~~~ 311 (489)
......+.++ |. + .......|+...+++++|||++||.... ..+.+..+++++++.+++
T Consensus 205 ~~~~~~~~~~-~~---~---------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (398)
T 3oti_A 205 EPEGWFMRWV-PY---G---------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDAD 265 (398)
T ss_dssp CCCSBCCCCC-CC---C---------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSE
T ss_pred CCCCCCcccc-CC---C---------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCE
Confidence 0000001111 00 0 1234456776556678999999999653 456788899999999999
Q ss_pred EEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCcc
Q 042970 312 FIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQ 391 (489)
Q Consensus 312 ~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 391 (489)
++|+.++.... .+.. .++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||
T Consensus 266 ~v~~~g~~~~~-~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq 331 (398)
T 3oti_A 266 FVLALGDLDIS-PLGT-----------LPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQ 331 (398)
T ss_dssp EEEECTTSCCG-GGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCC
T ss_pred EEEEECCcChh-hhcc-----------CCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchh
Confidence 99998765321 1111 1569999999999999999998 99999999999999999999999999999
Q ss_pred hhhH--HHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCCh
Q 042970 392 FCNE--KLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSS 469 (489)
Q Consensus 392 ~~na--~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~ 469 (489)
+.|+ .++ ++.|+|+.++.. ..+++.|. ++|+|+ .|+++++++++++.+ ..+
T Consensus 332 ~~~a~~~~~-~~~g~g~~~~~~-------------~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~~----~~~- 384 (398)
T 3oti_A 332 FQHTAREAV-SRRGIGLVSTSD-------------KVDADLLR----RLIGDE----SLRTAAREVREEMVA----LPT- 384 (398)
T ss_dssp SSCTTHHHH-HHHTSEEECCGG-------------GCCHHHHH----HHHHCH----HHHHHHHHHHHHHHT----SCC-
T ss_pred HHHHHHHHH-HHCCCEEeeCCC-------------CCCHHHHH----HHHcCH----HHHHHHHHHHHHHHh----CCC-
Confidence 9999 999 599999999776 67888777 788888 999999999988762 233
Q ss_pred HHHHHHHHHHH
Q 042970 470 YNNIQLFFQDI 480 (489)
Q Consensus 470 ~~~~~~~~~~~ 480 (489)
...+.+.+..+
T Consensus 385 ~~~~~~~l~~l 395 (398)
T 3oti_A 385 PAETVRRIVER 395 (398)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444444444
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.1e-34 Score=288.08 Aligned_cols=364 Identities=12% Similarity=0.099 Sum_probs=233.8
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEe-eCCcccCCC-----CC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEI-QFPWQEAGL-----PQ 80 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~-----~~ 80 (489)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.++.+ +.+...+.. ..
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 47999999999999999999999999999999999876443333322 6888777 321100000 00
Q ss_pred CCCCCCCCCchhhHHHHHHHHhhc-------hHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHH
Q 042970 81 GCENFDMLPSIDLASKFFNSHSML-------QLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCFCL 153 (489)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~~~ 153 (489)
................+......+ ...+.+++++ ++||+||+|...+++..+|+.+|||++.+.+......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTA 149 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccc
Confidence 000000011112222222222334 6677888888 8999999998777889999999999998754331100
Q ss_pred HHHhhhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcc-----cCcEEEecChhhhhhHH
Q 042970 154 FCLHILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADK-----KTFGIIINTVEELESAY 228 (489)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~t~~~l~~~~ 228 (489)
.. +.. ....++......+. ..+..+..+..+++..
T Consensus 150 ~~------------------------~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (391)
T 3tsa_A 150 GP------------------------FSD---------------RAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS- 189 (391)
T ss_dssp TH------------------------HHH---------------HHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-
T ss_pred cc------------------------ccc---------------hHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-
Confidence 00 000 00111111111110 0122332222222210
Q ss_pred HHHHHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCccc--CC-HHHHHHHHHHH
Q 042970 229 FREYKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICN--LT-SSQLIELGLGL 305 (489)
Q Consensus 229 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~--~~-~~~~~~~~~al 305 (489)
.......+.++ |.. .......|+...+++++||+++||... .. .+.+..++++
T Consensus 190 ----~~~~~~~~~~~-p~~------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~- 245 (391)
T 3tsa_A 190 ----DAPQGAPVQYV-PYN------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA- 245 (391)
T ss_dssp ----TSCCCEECCCC-CCC------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-
T ss_pred ----CCCccCCeeee-cCC------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-
Confidence 00000111122 110 123344677655567899999999854 23 5667778888
Q ss_pred HhC-CCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCCcEee
Q 042970 306 EAS-KKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLT 384 (489)
Q Consensus 306 ~~~-~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~ 384 (489)
++. +++++|..++... .. +. ..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|+
T Consensus 246 ~~~p~~~~v~~~~~~~~-~~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~ 311 (391)
T 3tsa_A 246 TELPGVEAVIAVPPEHR-AL-----LT------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLV 311 (391)
T ss_dssp HTSTTEEEEEECCGGGG-GG-----CT------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEE
T ss_pred ccCCCeEEEEEECCcch-hh-----cc------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEe
Confidence 777 8888988775421 11 11 11569999999999999988888 9999999999999999999999
Q ss_pred cCCcCcchhhHHHHHHHhcceeEecc--cCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHH
Q 042970 385 WPLFGDQFCNEKLIVEVLRIGVSVGV--EVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRA 462 (489)
Q Consensus 385 ~P~~~DQ~~na~~v~e~~g~G~~l~~--~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~ 462 (489)
+|...||+.|+.++ ++.|+|+.++. . ..+++.|.++|.++|+|+ .+++++++++..+.
T Consensus 312 ~p~~~~q~~~a~~~-~~~g~g~~~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~-- 371 (391)
T 3tsa_A 312 LPQYFDQFDYARNL-AAAGAGICLPDEQA-------------QSDHEQFTDSIATVLGDT----GFAAAAIKLSDEIT-- 371 (391)
T ss_dssp CCCSTTHHHHHHHH-HHTTSEEECCSHHH-------------HTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHH--
T ss_pred cCCcccHHHHHHHH-HHcCCEEecCcccc-------------cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH--
Confidence 99999999999999 59999999986 5 589999999999999999 89999998888875
Q ss_pred HhhCCChHHHHHHHHHHHHc
Q 042970 463 LEEGGSSYNNIQLFFQDIMQ 482 (489)
Q Consensus 463 ~~~gg~~~~~~~~~~~~~~~ 482 (489)
++++..+ +.+.+..+..
T Consensus 372 --~~~~~~~-~~~~i~~~~~ 388 (391)
T 3tsa_A 372 --AMPHPAA-LVRTLENTAA 388 (391)
T ss_dssp --TSCCHHH-HHHHHHHC--
T ss_pred --cCCCHHH-HHHHHHHHHh
Confidence 2344444 4444454443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=2.7e-32 Score=272.85 Aligned_cols=367 Identities=16% Similarity=0.170 Sum_probs=239.5
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcc----------
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQ---------- 74 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---------- 74 (489)
..+|||+|++.++.||++|++.||++|+++||+|++++++...+.+... ++.++.++....
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 88 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIR 88 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhh
Confidence 3579999999999999999999999999999999999987543333322 788888762000
Q ss_pred --cCCCCCCCCCCCCCCchhhHHHHHHH-HhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHH
Q 042970 75 --EAGLPQGCENFDMLPSIDLASKFFNS-HSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSCF 151 (489)
Q Consensus 75 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~~ 151 (489)
....+. ....... ......+... .......+.+++++ .+||+||+|...+++..+|+.+|||++.+......
T Consensus 89 ~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 163 (412)
T 3otg_A 89 FDTDSPEG-LTPEQLS--ELPQIVFGRVIPQRVFDELQPVIER--LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT 163 (412)
T ss_dssp HSCSCCTT-CCHHHHT--TSHHHHHHTHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC
T ss_pred hcccCCcc-CChhHhh--HHHHHHHhccchHHHHHHHHHHHHh--cCCCEEEECchhhHHHHHHHHcCCCEEEecccccC
Confidence 000000 0000000 0111111221 22344677788888 89999999987778889999999999986443211
Q ss_pred HHHHHhhhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHh----------cccCcEEEecCh
Q 042970 152 CLFCLHILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAA----------DKKTFGIIINTV 221 (489)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~t~ 221 (489)
....... +...+.+.... ...++.++..+-
T Consensus 164 ~~~~~~~----------------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~ 203 (412)
T 3otg_A 164 PDDLTRS----------------------------------------IEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFP 203 (412)
T ss_dssp CSHHHHH----------------------------------------HHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSC
T ss_pred chhhhHH----------------------------------------HHHHHHHHHHHcCCCCCcccccCCCCeEEeeCC
Confidence 0000000 00001111000 122333444433
Q ss_pred hhhhhHHHHHHHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhh-ccCCCCCeEEEEEeCCcccCCHHHHHH
Q 042970 222 EELESAYFREYKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTW-LDSQQPSSVVYVCLGSICNLTSSQLIE 300 (489)
Q Consensus 222 ~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~vVyvs~GS~~~~~~~~~~~ 300 (489)
..++.. ...+......+-+.... .......| ....+++++||+++||......+.+..
T Consensus 204 ~~~~~~-----~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~ 262 (412)
T 3otg_A 204 PSLQEP-----EFRARPRRHELRPVPFA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRA 262 (412)
T ss_dssp GGGSCH-----HHHTCTTEEECCCCCCC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHH
T ss_pred HHhcCC-----cccCCCCcceeeccCCC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHH
Confidence 333321 11111111111111110 01233445 222345679999999997556777888
Q ss_pred HHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhHHHHHHhCC
Q 042970 301 LGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGV 380 (489)
Q Consensus 301 ~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~Gv 380 (489)
+++++++.+.+++|..++....+.+.+ + ++|+.+.+|+|+.++|+++++ ||+|||+||++||+++|+
T Consensus 263 ~~~~l~~~~~~~~~~~g~~~~~~~l~~--~---------~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~ 329 (412)
T 3otg_A 263 AIDGLAGLDADVLVASGPSLDVSGLGE--V---------PANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGV 329 (412)
T ss_dssp HHHHHHTSSSEEEEECCSSCCCTTCCC--C---------CTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTC
T ss_pred HHHHHHcCCCEEEEEECCCCChhhhcc--C---------CCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCC
Confidence 999999889999999876542221111 1 569999999999999999999 999999999999999999
Q ss_pred cEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 042970 381 QMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAK 460 (489)
Q Consensus 381 P~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 460 (489)
|+|++|...||..|+..+ ++.|+|..++.. ..+++.|.++|.++|+|+ .+++++.+.+.++.
T Consensus 330 P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~~-------------~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 391 (412)
T 3otg_A 330 PQLSFPWAGDSFANAQAV-AQAGAGDHLLPD-------------NISPDSVSGAAKRLLAEE----SYRAGARAVAAEIA 391 (412)
T ss_dssp CEEECCCSTTHHHHHHHH-HHHTSEEECCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred CEEecCCchhHHHHHHHH-HHcCCEEecCcc-------------cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHh
Confidence 999999999999999999 599999999876 689999999999999998 88888887777765
Q ss_pred HHHhhCCChHHHHHHHHHHHHc
Q 042970 461 RALEEGGSSYNNIQLFFQDIMQ 482 (489)
Q Consensus 461 ~~~~~gg~~~~~~~~~~~~~~~ 482 (489)
+ ..+..+.++.+ ..+.+
T Consensus 392 ~----~~~~~~~~~~~-~~l~~ 408 (412)
T 3otg_A 392 A----MPGPDEVVRLL-PGFAS 408 (412)
T ss_dssp H----SCCHHHHHTTH-HHHHC
T ss_pred c----CCCHHHHHHHH-HHHhc
Confidence 3 34444444444 44433
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2e-29 Score=247.04 Aligned_cols=327 Identities=14% Similarity=0.108 Sum_probs=201.8
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFD 86 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (489)
+.||+|...|+.||++|.++||++|++|||+|+|++++...+. +.... .++.++.++.. ++... .
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~--~~v~~-----~g~~~~~i~~~----~~~~~----~ 66 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIEN--DLVPK-----AGLPLHLIQVS----GLRGK----G 66 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHH--HHTGG-----GTCCEEECC----------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhh--chhhh-----cCCcEEEEECC----CcCCC----C
Confidence 3589999999999999999999999999999999987654321 11111 26788877632 11110 0
Q ss_pred CCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCc--chHHHHHHcCCCcEEEecchHHHHHHHhhhhhccc
Q 042970 87 MLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYP--WTVDTAAKFNVPRIVFHGFSCFCLFCLHILRDSKV 164 (489)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~--~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~~~~~ 164 (489)
..........+... .....+++++ .+||+||++..+. .+..+|+.+|||++..-
T Consensus 67 ~~~~~~~~~~~~~~----~~~~~~~l~~--~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe------------------ 122 (365)
T 3s2u_A 67 LKSLVKAPLELLKS----LFQALRVIRQ--LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHE------------------ 122 (365)
T ss_dssp ------CHHHHHHH----HHHHHHHHHH--HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEE------------------
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHh--cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEe------------------
Confidence 00000111111111 2244567777 8999999987554 45678999999999731
Q ss_pred CCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcCCceEEeC
Q 042970 165 HENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQGKVWCIG 244 (489)
Q Consensus 165 ~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~~~~~~vG 244 (489)
.+.+||+.. ++ ..+.++.++.. +++..+ ...+...+|
T Consensus 123 ---------~n~~~G~~n----------------------r~--l~~~a~~v~~~-~~~~~~---------~~~k~~~~g 159 (365)
T 3s2u_A 123 ---------QNAVAGTAN----------------------RS--LAPIARRVCEA-FPDTFP---------ASDKRLTTG 159 (365)
T ss_dssp ---------CSSSCCHHH----------------------HH--HGGGCSEEEES-STTSSC---------C---CEECC
T ss_pred ---------cchhhhhHH----------------------Hh--hccccceeeec-cccccc---------CcCcEEEEC
Confidence 112233221 11 11223333322 221110 113456666
Q ss_pred cccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhC----CCCEEEEEecCC
Q 042970 245 PVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEAS----KKPFIWVTRVGN 320 (489)
Q Consensus 245 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~----~~~~v~~~~~~~ 320 (489)
+........ +......+ .+++++|+|..||.... .....+.+++... +..++|.++...
T Consensus 160 ~pvr~~~~~-------------~~~~~~~~--~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~ 222 (365)
T 3s2u_A 160 NPVRGELFL-------------DAHARAPL--TGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQH 222 (365)
T ss_dssp CCCCGGGCC-------------CTTSSCCC--TTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTT
T ss_pred CCCchhhcc-------------chhhhccc--CCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccc
Confidence 433221110 11111122 23456899999997642 2223355666543 445666666543
Q ss_pred chhhhhhhhchhhHHHHhcCCCeEEecccch-HhhhcCCCccccccccChhhHHHHHHhCCcEeecCCc----CcchhhH
Q 042970 321 KLEELEKWLVEENFEERIKGRGLLIRGWVPQ-VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF----GDQFCNE 395 (489)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq-~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na 395 (489)
.. . +.+.+ ...+.++.+.+|+++ .++|+.+|+ +|||+|.+|++|++++|+|+|.+|+- .+|..||
T Consensus 223 ~~-~-----~~~~~--~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA 292 (365)
T 3s2u_A 223 AE-I-----TAERY--RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNA 292 (365)
T ss_dssp HH-H-----HHHHH--HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHH
T ss_pred cc-c-----cccee--cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHH
Confidence 21 1 11111 112568889999987 579999999 99999999999999999999999973 5899999
Q ss_pred HHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 042970 396 KLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFE 456 (489)
Q Consensus 396 ~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~ 456 (489)
+.+ ++.|+|+.++.+ .++++.|.++|.++|+|++..++|+++|++++
T Consensus 293 ~~l-~~~G~a~~l~~~-------------~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 293 EFL-VRSGAGRLLPQK-------------STGAAELAAQLSEVLMHPETLRSMADQARSLA 339 (365)
T ss_dssp HHH-HTTTSEEECCTT-------------TCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTC
T ss_pred HHH-HHCCCEEEeecC-------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcC
Confidence 999 599999999776 68999999999999999977667777766553
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=9.4e-27 Score=202.85 Aligned_cols=162 Identities=23% Similarity=0.355 Sum_probs=137.4
Q ss_pred CchhhhhhccCCCCCeEEEEEeCCccc-CCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeE
Q 042970 266 DVPECLTWLDSQQPSSVVYVCLGSICN-LTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLL 344 (489)
Q Consensus 266 ~~~~~~~~l~~~~~~~vVyvs~GS~~~-~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 344 (489)
.+.++.+|++..+++++|||++||... ...+.+..++++++..+++++|++++.... . + ++|+.
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~----~--~---------~~~v~ 71 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD----T--L---------GLNTR 71 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT----T--C---------CTTEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc----c--C---------CCcEE
Confidence 368899999877667899999999964 456778889999998899999998754311 0 2 45999
Q ss_pred EecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccc
Q 042970 345 IRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGV 424 (489)
Q Consensus 345 v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~ 424 (489)
+.+|+||.+++.|+.+++||||||+||++||+++|+|+|++|...||..||.++ ++.|+|+.++..
T Consensus 72 ~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~------------- 137 (170)
T 2o6l_A 72 LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN------------- 137 (170)
T ss_dssp EESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT-------------
T ss_pred EecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc-------------
Confidence 999999999996666666999999999999999999999999999999999999 599999999766
Q ss_pred cccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 042970 425 LVKKDDVETAINILMDDGEERDVRRKRAKEFEELAK 460 (489)
Q Consensus 425 ~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 460 (489)
.++.++|.++|.++++|+ .|+++++++++.++
T Consensus 138 ~~~~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 689999999999999987 89999999998875
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.85 E-value=9.9e-20 Score=178.44 Aligned_cols=322 Identities=13% Similarity=0.062 Sum_probs=195.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFDM 87 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (489)
|||++++.+..||..+++.|+++|.++||+|++++...... ..... ..++.++.++... +...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~~-----~~g~~~~~~~~~~----~~~~------ 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLVP-----KHGIEIDFIRISG----LRGK------ 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHGG-----GGTCEEEECCCCC----CTTC------
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhcc-----ccCCceEEecCCc----cCcC------
Confidence 89999998888999999999999999999999998764321 11111 1267777765321 1110
Q ss_pred CCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC--cchHHHHHHcCCCcEEEecchHHHHHHHhhhhhcccC
Q 042970 88 LPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY--PWTVDTAAKFNVPRIVFHGFSCFCLFCLHILRDSKVH 165 (489)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~--~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~~~~~~ 165 (489)
............ ......+.+++++ .+||+|+++... ..+..+++.+|+|++......
T Consensus 70 -~~~~~~~~~~~~-~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------- 129 (364)
T 1f0k_A 70 -GIKALIAAPLRI-FNAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------- 129 (364)
T ss_dssp -CHHHHHTCHHHH-HHHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------
T ss_pred -ccHHHHHHHHHH-HHHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------
Confidence 000111001111 1123456677777 799999998643 245677888999998643210
Q ss_pred CCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcCCceEEeCc
Q 042970 166 ENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQGKVWCIGP 245 (489)
Q Consensus 166 ~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~~~~~~vGp 245 (489)
.++ ...+. ..+.++.++..+-.. + +++..+|.
T Consensus 130 -----------~~~----------------------~~~~~--~~~~~d~v~~~~~~~------------~-~~~~~i~n 161 (364)
T 1f0k_A 130 -----------IAG----------------------LTNKW--LAKIATKVMQAFPGA------------F-PNAEVVGN 161 (364)
T ss_dssp -----------SCC----------------------HHHHH--HTTTCSEEEESSTTS------------S-SSCEECCC
T ss_pred -----------CCc----------------------HHHHH--HHHhCCEEEecChhh------------c-CCceEeCC
Confidence 000 00010 123444555433211 2 24455553
Q ss_pred ccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhC--CCCEEEEEecCCchh
Q 042970 246 VSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEAS--KKPFIWVTRVGNKLE 323 (489)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~--~~~~v~~~~~~~~~~ 323 (489)
-+...... .......+...+++++|++..|+... ......++++++.. +.++++.+|.+. ..
T Consensus 162 ~v~~~~~~-------------~~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~-~~ 225 (364)
T 1f0k_A 162 PVRTDVLA-------------LPLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS-QQ 225 (364)
T ss_dssp CCCHHHHT-------------SCCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC-HH
T ss_pred ccchhhcc-------------cchhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch-HH
Confidence 22110000 00011112222335678888888753 33444455665543 566667666554 12
Q ss_pred hhhhhhchhhHHHHhcCCCeEEecccch-HhhhcCCCccccccccChhhHHHHHHhCCcEeecCCc---CcchhhHHHHH
Q 042970 324 ELEKWLVEENFEERIKGRGLLIRGWVPQ-VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF---GDQFCNEKLIV 399 (489)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~v~~~~pq-~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~ 399 (489)
.+.+ ...+..-+++.+.+|+++ ..+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.
T Consensus 226 ~l~~------~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~ 297 (364)
T 1f0k_A 226 SVEQ------AYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE 297 (364)
T ss_dssp HHHH------HHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH
T ss_pred HHHH------HHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHH
Confidence 1111 111122258999999954 779999999 99999999999999999999999987 79999999994
Q ss_pred HHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHH
Q 042970 400 EVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKE 454 (489)
Q Consensus 400 e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~ 454 (489)
+.|.|..++.. ..+.+.|.++|.++ |++..+.+.+++++
T Consensus 298 -~~g~g~~~~~~-------------d~~~~~la~~i~~l--~~~~~~~~~~~~~~ 336 (364)
T 1f0k_A 298 -KAGAAKIIEQP-------------QLSVDAVANTLAGW--SRETLLTMAERARA 336 (364)
T ss_dssp -HTTSEEECCGG-------------GCCHHHHHHHHHTC--CHHHHHHHHHHHHH
T ss_pred -hCCcEEEeccc-------------cCCHHHHHHHHHhc--CHHHHHHHHHHHHH
Confidence 99999988765 56799999999988 67444444444433
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.62 E-value=7.3e-15 Score=136.56 Aligned_cols=118 Identities=8% Similarity=0.024 Sum_probs=88.4
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHh-cCCCeEEecccchH-hhhc
Q 042970 279 PSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERI-KGRGLLIRGWVPQV-MILS 356 (489)
Q Consensus 279 ~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~v~~~~pq~-~ll~ 356 (489)
+.+.|+|++|..... .....+++++.... ++.+.++.+... .+.+.... ...|+.+..|+++. +++.
T Consensus 156 ~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~~--------~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNPN--------LKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCTT--------HHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCchH--------HHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 346899999975432 24445777776544 566666654321 12222211 24589999999875 6999
Q ss_pred CCCccccccccChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEeccc
Q 042970 357 HPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVE 411 (489)
Q Consensus 357 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~ 411 (489)
.+++ +|++|| +|+.|+++.|+|+|++|...+|..||..+ ++.|++..+..-
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~ 275 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYL 275 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchh
Confidence 9999 999999 89999999999999999999999999999 599999988643
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.58 E-value=2.8e-15 Score=133.60 Aligned_cols=120 Identities=11% Similarity=0.019 Sum_probs=87.2
Q ss_pred CCCeEEEEEeCCcccCCHHHHHH-----HHHHHHhCC-CCEEEEEecCCchhhhhhhhchhhHHHHh-------------
Q 042970 278 QPSSVVYVCLGSICNLTSSQLIE-----LGLGLEASK-KPFIWVTRVGNKLEELEKWLVEENFEERI------------- 338 (489)
Q Consensus 278 ~~~~vVyvs~GS~~~~~~~~~~~-----~~~al~~~~-~~~v~~~~~~~~~~~~~~~~l~~~~~~~~------------- 338 (489)
+++++|||+.||.... .+.+.. ++.+|.+.+ .++++.+|..... ....+....
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhcccccccccccc
Confidence 3467899999997432 333333 348888877 7899999876431 001110000
Q ss_pred --------------cCCCeEEecccchH-hhhc-CCCccccccccChhhHHHHHHhCCcEeecCCc----CcchhhHHHH
Q 042970 339 --------------KGRGLLIRGWVPQV-MILS-HPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF----GDQFCNEKLI 398 (489)
Q Consensus 339 --------------~~~~~~v~~~~pq~-~ll~-~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v 398 (489)
..-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 01245677888774 7999 9999 99999999999999999999999984 3699999999
Q ss_pred HHHhcceeEe
Q 042970 399 VEVLRIGVSV 408 (489)
Q Consensus 399 ~e~~g~G~~l 408 (489)
++.|+|+.+
T Consensus 176 -~~~G~~~~~ 184 (224)
T 2jzc_A 176 -VELGYVWSC 184 (224)
T ss_dssp -HHHSCCCEE
T ss_pred -HHCCCEEEc
Confidence 599998655
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.46 E-value=9.8e-11 Score=115.31 Aligned_cols=355 Identities=12% Similarity=0.057 Sum_probs=196.7
Q ss_pred CCCCcEEEEecC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCC
Q 042970 4 EASEFHILLLPF--L--AQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLP 79 (489)
Q Consensus 4 ~~~~~~vl~~~~--p--~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 79 (489)
||++|||++++. + ..|.-.-+..|++.| +||+|++++........... . ...++.++.++..
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~-~----~~~~~~~~~~~~~------- 66 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY-D----KTLDYEVIRWPRS------- 66 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH-H----TTCSSEEEEESSS-------
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh-c----cccceEEEEcccc-------
Confidence 356788999985 3 568888999999999 79999999876554321111 1 1236777776521
Q ss_pred CCCCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCc--chHHHHHHcCCCcEEEecchHHHHHHHh
Q 042970 80 QGCENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYP--WTVDTAAKFNVPRIVFHGFSCFCLFCLH 157 (489)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~--~~~~~A~~lgIP~v~l~~~~~~~~~~~~ 157 (489)
.. .... .....+.+++++ .+||+|++..... ....+++.+|+|.+.+.........
T Consensus 67 ~~------~~~~-----------~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~--- 124 (394)
T 3okp_A 67 VM------LPTP-----------TTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW--- 124 (394)
T ss_dssp SC------CSCH-----------HHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH---
T ss_pred cc------ccch-----------hhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh---
Confidence 00 1110 123456777888 8999999765443 4566788999995543322211100
Q ss_pred hhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhc-
Q 042970 158 ILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAK- 236 (489)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~- 236 (489)
.. ............+.++.++..+-...+ .+...+
T Consensus 125 --------------------~~-------------------~~~~~~~~~~~~~~~d~ii~~s~~~~~-----~~~~~~~ 160 (394)
T 3okp_A 125 --------------------SM-------------------LPGSRQSLRKIGTEVDVLTYISQYTLR-----RFKSAFG 160 (394)
T ss_dssp --------------------TT-------------------SHHHHHHHHHHHHHCSEEEESCHHHHH-----HHHHHHC
T ss_pred --------------------hh-------------------cchhhHHHHHHHHhCCEEEEcCHHHHH-----HHHHhcC
Confidence 00 001111122345678888887755333 122222
Q ss_pred -CCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCCE
Q 042970 237 -QGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICN-LTSSQLIELGLGLEA--SKKPF 312 (489)
Q Consensus 237 -~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~ 312 (489)
..++..|..-+....-... .......+...+...+ +..+++..|++.. -..+.+.+.+..+.+ .+.++
T Consensus 161 ~~~~~~vi~ngv~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l 232 (394)
T 3okp_A 161 SHPTFEHLPSGVDVKRFTPA-------TPEDKSATRKKLGFTD-TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQL 232 (394)
T ss_dssp SSSEEEECCCCBCTTTSCCC-------CHHHHHHHHHHTTCCT-TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEE
T ss_pred CCCCeEEecCCcCHHHcCCC-------CchhhHHHHHhcCCCc-CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEE
Confidence 2355555543221110000 0000122233332222 2246677787643 223333333333332 35555
Q ss_pred EEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHh---hhcCCCcccccc-----------ccChhhHHHHHHh
Q 042970 313 IWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVM---ILSHPAVGGFLT-----------HCGWNSSLEGISA 378 (489)
Q Consensus 313 v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~---ll~~~~~~~~I~-----------HgG~~s~~eal~~ 378 (489)
++. |.+.....+.+ +..+ ..+++.+.+|+|+.+ ++..+++ +|. -|.-+++.||+++
T Consensus 233 ~i~-G~g~~~~~l~~--~~~~-----~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~ 302 (394)
T 3okp_A 233 LIV-GSGRYESTLRR--LATD-----VSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQAC 302 (394)
T ss_dssp EEE-CCCTTHHHHHH--HTGG-----GGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHT
T ss_pred EEE-cCchHHHHHHH--HHhc-----ccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHc
Confidence 554 33332222222 1111 146899999997654 6788888 776 4556789999999
Q ss_pred CCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHH
Q 042970 379 GVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEEL 458 (489)
Q Consensus 379 GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~ 458 (489)
|+|+|+.+.. .+...+ +. |.|...+. -+.+++.++|.++++|++..+.+.+++++....
T Consensus 303 G~PvI~~~~~----~~~e~i-~~-~~g~~~~~---------------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 361 (394)
T 3okp_A 303 GVPVIAGTSG----GAPETV-TP-ATGLVVEG---------------SDVDKLSELLIELLDDPIRRAAMGAAGRAHVEA 361 (394)
T ss_dssp TCCEEECSST----TGGGGC-CT-TTEEECCT---------------TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCC----ChHHHH-hc-CCceEeCC---------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 9999997653 233334 23 36777653 378999999999999886666666666665443
Q ss_pred HHHHHhhCCChHHHHHHHHHHHHcCC
Q 042970 459 AKRALEEGGSSYNNIQLFFQDIMQQP 484 (489)
Q Consensus 459 ~~~~~~~gg~~~~~~~~~~~~~~~~~ 484 (489)
.-+-.+..+++++.+.+..
T Consensus 362 -------~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 362 -------EWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp -------HTBHHHHHHHHHHHHHSCC
T ss_pred -------hCCHHHHHHHHHHHHHHhc
Confidence 2234456666666666554
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.40 E-value=4.2e-10 Score=112.55 Aligned_cols=376 Identities=14% Similarity=0.072 Sum_probs=193.3
Q ss_pred CCCcEEEEecC---C--------CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCc
Q 042970 5 ASEFHILLLPF---L--------AQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPW 73 (489)
Q Consensus 5 ~~~~~vl~~~~---p--------~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 73 (489)
.++|||++++. | ..|+-.....|++.|.++||+|++++........ . ......++.++.++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~----~~~~~~~v~v~~~~~~~ 92 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG-E----IVRVAENLRVINIAAGP 92 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC-S----EEEEETTEEEEEECCSC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc-c----cccccCCeEEEEecCCC
Confidence 45789999995 2 3688899999999999999999999865332110 0 00011367777665221
Q ss_pred ccCCCCCCCCCCCCCCchhhHHHHHHHHhhchHHHHHH-HhhcCCCCcEEEECCCCc--chHHHHHHcCCCcEEEecchH
Q 042970 74 QEAGLPQGCENFDMLPSIDLASKFFNSHSMLQLPFENL-FSEQSPKPCCIISDMGYP--WTVDTAAKFNVPRIVFHGFSC 150 (489)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-l~~~~~~~D~VI~D~~~~--~~~~~A~~lgIP~v~l~~~~~ 150 (489)
. .. ............+ ...+.+. ++.. .+||+|++..... .+..+++.+|+|+|.......
T Consensus 93 ~-----~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~ 156 (438)
T 3c48_A 93 Y-----EG---LSKEELPTQLAAF-------TGGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLA 156 (438)
T ss_dssp S-----SS---CCGGGGGGGHHHH-------HHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred c-----cc---cchhHHHHHHHHH-------HHHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCc
Confidence 0 00 0000001111111 1122222 4441 2599999775322 344567788999987544332
Q ss_pred HHHHHHhhhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCCh-HHHHH-HHHHhcccCcEEEecChhhhhhHH
Q 042970 151 FCLFCLHILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDM-KDINE-QMLAADKKTFGIIINTVEELESAY 228 (489)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~-~~~~~-~~~~~~~~~~~~l~~t~~~l~~~~ 228 (489)
.... ..+.. .... ..... ........++.++..+-...+
T Consensus 157 ~~~~-----------------------~~~~~-------------~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~--- 197 (438)
T 3c48_A 157 AVKN-----------------------SYRDD-------------SDTPESEARRICEQQLVDNADVLAVNTQEEMQ--- 197 (438)
T ss_dssp HHHS-----------------------CC-----------------CCHHHHHHHHHHHHHHHHCSEEEESSHHHHH---
T ss_pred cccc-----------------------ccccc-------------cCCcchHHHHHHHHHHHhcCCEEEEcCHHHHH---
Confidence 2100 00000 0000 00111 112235678888887755433
Q ss_pred HHHHHhhcC---CceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCccc-CCHHHHHHHHHH
Q 042970 229 FREYKNAKQ---GKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICN-LTSSQLIELGLG 304 (489)
Q Consensus 229 ~~~~~~~~~---~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~-~~~~~~~~~~~a 304 (489)
.+...++ .++..|..-+....-.. .. ......+..-+.-.++ ..+++..|++.. -..+.+.+.+..
T Consensus 198 --~~~~~~g~~~~k~~vi~ngvd~~~~~~-----~~--~~~~~~~r~~~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~ 267 (438)
T 3c48_A 198 --DLMHHYDADPDRISVVSPGADVELYSP-----GN--DRATERSRRELGIPLH-TKVVAFVGRLQPFKGPQVLIKAVAA 267 (438)
T ss_dssp --HHHHHHCCCGGGEEECCCCCCTTTSCC-----C------CHHHHHHTTCCSS-SEEEEEESCBSGGGCHHHHHHHHHH
T ss_pred --HHHHHhCCChhheEEecCCccccccCC-----cc--cchhhhhHHhcCCCCC-CcEEEEEeeecccCCHHHHHHHHHH
Confidence 1222121 34555554322111000 00 0000113322222122 245667787654 223333333333
Q ss_pred HHhC----CCCEEEEEec----CCchhhhhhhhchhhHHHHhc-CCCeEEecccch---HhhhcCCCcccccccc----C
Q 042970 305 LEAS----KKPFIWVTRV----GNKLEELEKWLVEENFEERIK-GRGLLIRGWVPQ---VMILSHPAVGGFLTHC----G 368 (489)
Q Consensus 305 l~~~----~~~~v~~~~~----~~~~~~~~~~~l~~~~~~~~~-~~~~~v~~~~pq---~~ll~~~~~~~~I~Hg----G 368 (489)
+.+. +.++++ +|. +.....+. .+..+.. .+++.+.+|+|+ ..++..+++ +|.-. .
T Consensus 268 l~~~~p~~~~~l~i-~G~~~~~g~~~~~l~------~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~ 338 (438)
T 3c48_A 268 LFDRDPDRNLRVII-CGGPSGPNATPDTYR------HMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESF 338 (438)
T ss_dssp HHHHCTTCSEEEEE-ECCBC------CHHH------HHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSS
T ss_pred HHhhCCCcceEEEE-EeCCCCCCcHHHHHH------HHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCC
Confidence 3321 233433 333 11111111 1111121 468999999986 457888888 77543 3
Q ss_pred hhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHH
Q 042970 369 WNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVR 448 (489)
Q Consensus 369 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~ 448 (489)
-+++.||+++|+|+|+.+. ......+ +..+.|+.++. -+.+++.++|.++++|++..+.+
T Consensus 339 ~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~---------------~d~~~la~~i~~l~~~~~~~~~~ 398 (438)
T 3c48_A 339 GLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVDG---------------HSPHAWADALATLLDDDETRIRM 398 (438)
T ss_dssp CHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEESS---------------CCHHHHHHHHHHHHHCHHHHHHH
T ss_pred chHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECCC---------------CCHHHHHHHHHHHHcCHHHHHHH
Confidence 4589999999999999753 4455556 45567877753 47899999999999998777778
Q ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHcCC
Q 042970 449 RKRAKEFEELAKRALEEGGSSYNNIQLFFQDIMQQP 484 (489)
Q Consensus 449 ~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 484 (489)
.+++++....+.-. ...+.+.++++.+.+.+
T Consensus 399 ~~~~~~~~~~~s~~-----~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 399 GEDAVEHARTFSWA-----ATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCHH-----HHHHHHHHHHHHHhhhc
Confidence 88887776664322 12345556666665554
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.37 E-value=1.1e-10 Score=114.35 Aligned_cols=130 Identities=16% Similarity=0.182 Sum_probs=84.5
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEecCCchhhhhhhhchhhHHHHh-cCCCeEEecccch--
Q 042970 280 SSVVYVCLGSICNLTSSQLIELGLGLEA-----SKKPFIWVTRVGNKLEELEKWLVEENFEERI-KGRGLLIRGWVPQ-- 351 (489)
Q Consensus 280 ~~vVyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~v~~~~pq-- 351 (489)
+++|+++.|...... .+..++++++. .+.++++..+.+.. +-+.+.... ..+++++.+++++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV--------VREAVFPVLKGVRNFVLLDPLEYGS 267 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH--------HHHHHHHHhccCCCEEEECCCCHHH
Confidence 456777777653321 34555555543 24555554443321 111122211 1358988855554
Q ss_pred -HhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHH
Q 042970 352 -VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDD 430 (489)
Q Consensus 352 -~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~ 430 (489)
..+++.+++ ||+++| |.+.||+++|+|+|+.+..+++.. +. +.|.|+.++ .+++.
T Consensus 268 ~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~-~~g~g~lv~----------------~d~~~ 323 (376)
T 1v4v_A 268 MAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GL-KAGILKLAG----------------TDPEG 323 (376)
T ss_dssp HHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HH-HHTSEEECC----------------SCHHH
T ss_pred HHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hh-cCCceEECC----------------CCHHH
Confidence 578999999 999884 446699999999999987777665 33 567887662 37899
Q ss_pred HHHHHHHhccCCh
Q 042970 431 VETAINILMDDGE 443 (489)
Q Consensus 431 l~~ai~~il~~~~ 443 (489)
|.+++.++++|++
T Consensus 324 la~~i~~ll~d~~ 336 (376)
T 1v4v_A 324 VYRVVKGLLENPE 336 (376)
T ss_dssp HHHHHHHHHTCHH
T ss_pred HHHHHHHHHhChH
Confidence 9999999999873
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.33 E-value=1.9e-10 Score=113.71 Aligned_cols=350 Identities=14% Similarity=0.085 Sum_probs=181.7
Q ss_pred CCcEEEEecCC---C-ccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCC
Q 042970 6 SEFHILLLPFL---A-QGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQG 81 (489)
Q Consensus 6 ~~~~vl~~~~p---~-~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (489)
++|||++++.. . .|.-.-...|++.|.++||+|++++........... .... + .++.++. ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~----~~~~-~-~~~~~~~-------~~- 84 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDY----VVSG-G-KAVPIPY-------NG- 84 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTT----EEEC-C-CCC--------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcc----cccC-C-cEEeccc-------cC-
Confidence 46899999842 2 566788999999999999999999876332200000 0000 0 1111110 00
Q ss_pred CCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCc--chHHHHHHcCCCcEEEecchHHHHHHHhhh
Q 042970 82 CENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYP--WTVDTAAKFNVPRIVFHGFSCFCLFCLHIL 159 (489)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~--~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~ 159 (489)
. ...+ .........+.+++++ .+||+|++..... .+..++...++|++............
T Consensus 85 ----------~-~~~~-~~~~~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~---- 146 (406)
T 2gek_A 85 ----------S-VARL-RFGPATHRKVKKWIAE--GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLT---- 146 (406)
T ss_dssp ------------------CCHHHHHHHHHHHHH--HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHHH----
T ss_pred ----------C-cccc-cccHHHHHHHHHHHHh--cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhhh----
Confidence 0 0000 0000123456677777 7999999766443 35566777899999854321100000
Q ss_pred hhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcCC-
Q 042970 160 RDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQG- 238 (489)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~~- 238 (489)
...+...+......++.++..+-...+ .+...++.
T Consensus 147 ---------------------------------------~~~~~~~~~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~ 182 (406)
T 2gek_A 147 ---------------------------------------LSVFQGILRPYHEKIIGRIAVSDLARR-----WQMEALGSD 182 (406)
T ss_dssp ---------------------------------------HHHHHSTTHHHHTTCSEEEESSHHHHH-----HHHHHHSSC
T ss_pred ---------------------------------------HHHHHHHHHHHHhhCCEEEECCHHHHH-----HHHHhcCCC
Confidence 000000011235677788877744322 12223332
Q ss_pred ceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCc-cc-CCHHHHHHHHHHHHh--CCCCEEE
Q 042970 239 KVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSI-CN-LTSSQLIELGLGLEA--SKKPFIW 314 (489)
Q Consensus 239 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~-~~-~~~~~~~~~~~al~~--~~~~~v~ 314 (489)
++ .|..-+.... ..... ... . +. ++ ..+++..|+. .. -..+.+.+.+..+.+ .+.++++
T Consensus 183 ~~-vi~~~v~~~~-----~~~~~----~~~---~-~~--~~-~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i 245 (406)
T 2gek_A 183 AV-EIPNGVDVAS-----FADAP----LLD---G-YP--RE-GRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILI 245 (406)
T ss_dssp EE-ECCCCBCHHH-----HHTCC----CCT---T-CS--CS-SCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEE
T ss_pred cE-EecCCCChhh-----cCCCc----hhh---h-cc--CC-CeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEE
Confidence 33 4443211100 00000 000 0 00 01 1356667776 32 223333333333333 2445444
Q ss_pred EEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchH---hhhcCCCccccccc----cCh-hhHHHHHHhCCcEeecC
Q 042970 315 VTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQV---MILSHPAVGGFLTH----CGW-NSSLEGISAGVQMLTWP 386 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~---~ll~~~~~~~~I~H----gG~-~s~~eal~~GvP~l~~P 386 (489)
. |.... ..+.+ +.. +. .+++.+.+++++. .++..+++ +|.- .|+ +++.||+++|+|+|+.+
T Consensus 246 ~-G~~~~-~~l~~--~~~----~~-~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~ 314 (406)
T 2gek_A 246 V-GRGDE-DELRE--QAG----DL-AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASD 314 (406)
T ss_dssp E-SCSCH-HHHHH--HTG----GG-GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECC
T ss_pred E-cCCcH-HHHHH--HHH----hc-cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEec
Confidence 3 33321 22222 111 11 4689999999875 68889998 6643 344 48999999999999975
Q ss_pred CcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhC
Q 042970 387 LFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEG 466 (489)
Q Consensus 387 ~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~g 466 (489)
. ......+ +..+.|...+. -+.+++.++|.++++|++..+.+.+++++....+.-.
T Consensus 315 ~----~~~~e~i-~~~~~g~~~~~---------------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~---- 370 (406)
T 2gek_A 315 L----DAFRRVL-ADGDAGRLVPV---------------DDADGMAAALIGILEDDQLRAGYVARASERVHRYDWS---- 370 (406)
T ss_dssp C----HHHHHHH-TTTTSSEECCT---------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHH----
T ss_pred C----CcHHHHh-cCCCceEEeCC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHH----
Confidence 4 5556666 46677877753 4789999999999998865556666665554322111
Q ss_pred CChHHHHHHHHHHHHcCC
Q 042970 467 GSSYNNIQLFFQDIMQQP 484 (489)
Q Consensus 467 g~~~~~~~~~~~~~~~~~ 484 (489)
.....+.++++.+.+.+
T Consensus 371 -~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 371 -VVSAQIMRVYETVSGAG 387 (406)
T ss_dssp -HHHHHHHHHHHHHCCTT
T ss_pred -HHHHHHHHHHHHHHhhc
Confidence 11234445555555444
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.28 E-value=1.4e-09 Score=108.48 Aligned_cols=379 Identities=15% Similarity=0.076 Sum_probs=186.4
Q ss_pred CCcEEEEecCC-----CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH------HH-----HHhhhCCCceEEEEe
Q 042970 6 SEFHILLLPFL-----AQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKT------VL-----ARAVQSGLQIRLVEI 69 (489)
Q Consensus 6 ~~~~vl~~~~p-----~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~~~~i 69 (489)
++|||++++.. ..|--.-+..|+++|+++||+|+++++......-.. .. ........++.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 47899999832 445556689999999999999999985422110000 00 000001125677766
Q ss_pred eCCcccCCCCCCCCCCCCCC-chhh-HHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCc--chHHHHHHcCCCcEEE
Q 042970 70 QFPWQEAGLPQGCENFDMLP-SIDL-ASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYP--WTVDTAAKFNVPRIVF 145 (489)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~--~~~~~A~~lgIP~v~l 145 (489)
+.+... ...... ..+. ...+..........+..++.. ..+||+|.+..... .+..+++..|+|+|..
T Consensus 81 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~ 151 (439)
T 3fro_A 81 GGGLLD--------SEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE-EPLPDVVHFHDWHTVFAGALIKKYFKIPAVFT 151 (439)
T ss_dssp ESGGGG--------CSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTT-SCCCSEEEEESGGGHHHHHHHHHHHCCCEEEE
T ss_pred cchhcc--------ccccccCCcchhhhhhHHHHHHHHHHHHHHhcc-CCCCeEEEecchhhhhhHHHHhhccCCCEEEE
Confidence 531000 000000 0011 112222222223333333321 26999999775433 3556678889999885
Q ss_pred ecchHHHHHHHhhhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhh
Q 042970 146 HGFSCFCLFCLHILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELE 225 (489)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~ 225 (489)
....... .++... +....+........... ....+..++.++..|-...+
T Consensus 152 ~h~~~~~--------------------------~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~ad~ii~~S~~~~~ 201 (439)
T 3fro_A 152 IHRLNKS--------------------------KLPAFY-FHEAGLSELAPYPDIDP---EHTGGYIADIVTTVSRGYLI 201 (439)
T ss_dssp ESCCCCC--------------------------CEEHHH-HHHTTCGGGCCSSEECH---HHHHHHHCSEEEESCHHHHH
T ss_pred ecccccc--------------------------cCchHH-hCccccccccccceeeH---hhhhhhhccEEEecCHHHHH
Confidence 4322100 000000 00000000000000001 11234667788877765433
Q ss_pred hHHHHHHHhhcCCceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcc-c-CCHHHHHHHHH
Q 042970 226 SAYFREYKNAKQGKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSIC-N-LTSSQLIELGL 303 (489)
Q Consensus 226 ~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~-~-~~~~~~~~~~~ 303 (489)
. ....+ .....++..|..-+....-.... ...........+..-+.-. ++ .+++..|++. . -..+.+.+.+.
T Consensus 202 ~-~~~~~-~~~~~~i~vi~ngvd~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~~ 275 (439)
T 3fro_A 202 D-EWGFF-RNFEGKITYVFNGIDCSFWNESY--LTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAIE 275 (439)
T ss_dssp H-THHHH-GGGTTSEEECCCCCCTTTSCGGG--SCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHHH
T ss_pred H-Hhhhh-hhcCCceeecCCCCCchhcCccc--ccchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHHH
Confidence 2 11111 11234555554322211000000 0000000012222233222 23 5667788876 3 34455555555
Q ss_pred HHHh----CCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHh---hhcCCCccccccc----cChhhH
Q 042970 304 GLEA----SKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVM---ILSHPAVGGFLTH----CGWNSS 372 (489)
Q Consensus 304 al~~----~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~---ll~~~~~~~~I~H----gG~~s~ 372 (489)
.+.. .+.++++. |.+... ..+. + ..+..+. ++++.+.+|+++.+ ++..+++ +|.- |--+++
T Consensus 276 ~l~~~~~~~~~~l~i~-G~g~~~--~~~~-l-~~~~~~~-~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~ 347 (439)
T 3fro_A 276 ILSSKKEFQEMRFIII-GKGDPE--LEGW-A-RSLEEKH-GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVA 347 (439)
T ss_dssp HHHTSGGGGGEEEEEE-CCCCHH--HHHH-H-HHHHHHC-TTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHH
T ss_pred HHHhcccCCCeEEEEE-cCCChh--HHHH-H-HHHHhhc-CCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHH
Confidence 5554 34444443 333211 0010 1 1111222 35566788898854 6788888 7643 334689
Q ss_pred HHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhcc-CChhHHHHHHH
Q 042970 373 LEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMD-DGEERDVRRKR 451 (489)
Q Consensus 373 ~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~-~~~~~~~~~~~ 451 (489)
.||+++|+|+|+.. .......+ ..|.|..++. -+.+++.++|.++++ |++..+.+.++
T Consensus 348 ~EAma~G~Pvi~s~----~~~~~e~~--~~~~g~~~~~---------------~d~~~la~~i~~ll~~~~~~~~~~~~~ 406 (439)
T 3fro_A 348 LEAMCLGAIPIASA----VGGLRDII--TNETGILVKA---------------GDPGELANAILKALELSRSDLSKFREN 406 (439)
T ss_dssp HHHHHTTCEEEEES----STHHHHHC--CTTTCEEECT---------------TCHHHHHHHHHHHHHHTTTTTHHHHHH
T ss_pred HHHHHCCCCeEEcC----CCCcceeE--EcCceEEeCC---------------CCHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999974 34444444 3468877754 488999999999999 88877788888
Q ss_pred HHHHHHH
Q 042970 452 AKEFEEL 458 (489)
Q Consensus 452 a~~l~~~ 458 (489)
+++..+.
T Consensus 407 ~~~~~~~ 413 (439)
T 3fro_A 407 CKKRAMS 413 (439)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 7776643
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.26 E-value=8.6e-10 Score=108.82 Aligned_cols=353 Identities=12% Similarity=0.067 Sum_probs=180.4
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHHhhhCCCceEE-EEeeCCcccCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTPVNAARLKTVLARAVQSGLQIRL-VEIQFPWQEAGLPQG 81 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~ 81 (489)
|+++||++++ +++....=+-.|.++|.++ |+++.++.+....+......+. .++.. +.+. +...
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~-----~~i~~~~~l~-------v~~~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI-----FDIKPDIDLD-------IMKK 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH-----TTCCCSEECC-------CCC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh-----cCCCCCcccc-------cCCC
Confidence 5667888776 5555666678899999988 6887766544221111111111 12211 1111 1100
Q ss_pred CCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECC--CC-cchHHHHHHcCCCcEEEecchHHHHHHHhh
Q 042970 82 CENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDM--GY-PWTVDTAAKFNVPRIVFHGFSCFCLFCLHI 158 (489)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~--~~-~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~ 158 (489)
.. ... ..+......+.+++++ .+||+|++-. .. +++..+|.++|||.+.+... ..+.
T Consensus 92 ------~~--~~~----~~~~~~~~~l~~~l~~--~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ag-lrs~----- 151 (403)
T 3ot5_A 92 ------GQ--TLA----EITSRVMNGINEVIAA--ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAG-LRTW----- 151 (403)
T ss_dssp ------CC--CHH----HHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCC-CCCS-----
T ss_pred ------CC--CHH----HHHHHHHHHHHHHHHH--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC-cccc-----
Confidence 00 111 1223345567788888 8999998632 22 34578999999998753210 0000
Q ss_pred hhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcC-
Q 042970 159 LRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQ- 237 (489)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~- 237 (489)
... -.+| ....+.+.. ..++.++..+-..-+ . ......+
T Consensus 152 -------------~~~---~~~p------------------~~~~r~~~~--~~a~~~~~~se~~~~--~--l~~~Gi~~ 191 (403)
T 3ot5_A 152 -------------NKY---SPFP------------------EEMNRQLTG--VMADIHFSPTKQAKE--N--LLAEGKDP 191 (403)
T ss_dssp -------------CTT---SSTT------------------HHHHHHHHH--HHCSEEEESSHHHHH--H--HHHTTCCG
T ss_pred -------------ccc---cCCc------------------HHHHHHHHH--HhcCEEECCCHHHHH--H--HHHcCCCc
Confidence 000 0000 112222211 234555555533211 1 1112222
Q ss_pred CceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCCE
Q 042970 238 GKVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA-----SKKPF 312 (489)
Q Consensus 238 ~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~ 312 (489)
.+++.+|....+.... . ... ....+..+.+ +++++++++.|.....+. .+..+++++.. .+.++
T Consensus 192 ~~i~vvGn~~~D~~~~----~-~~~--~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~ 260 (403)
T 3ot5_A 192 ATIFVTGNTAIDALKT----T-VQK--DYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTEL 260 (403)
T ss_dssp GGEEECCCHHHHHHHH----H-SCT--TCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEE
T ss_pred ccEEEeCCchHHHHHh----h-hhh--hcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceE
Confidence 3588888432211000 0 000 0011222222 345678787664322221 24455555543 35566
Q ss_pred EEEEecCCchhhhhhhhchhhHHHHh-cCCCeEEecccch---HhhhcCCCccccccccChhhHHHHHHhCCcEeecCCc
Q 042970 313 IWVTRVGNKLEELEKWLVEENFEERI-KGRGLLIRGWVPQ---VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF 388 (489)
Q Consensus 313 v~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~v~~~~pq---~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~ 388 (489)
++..+.+.. .. ..+.+.. ..+++++.+++++ ..+++.+++ +|+-+|. .+.||.++|+|+|++|..
T Consensus 261 v~~~~~~~~---~~-----~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~ 329 (403)
T 3ot5_A 261 VYPMHLNPA---VR-----EKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDT 329 (403)
T ss_dssp EEECCSCHH---HH-----HHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSS
T ss_pred EEecCCCHH---HH-----HHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCC
Confidence 665443211 11 1111111 2468999998863 567888888 9988753 236999999999999877
Q ss_pred CcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCC
Q 042970 389 GDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGS 468 (489)
Q Consensus 389 ~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~ 468 (489)
.+++. ++ +.|.|+.+. .++++|.+++.++++|++..+.+++++ . ...+|++
T Consensus 330 ~~~~e----~v-~~g~~~lv~----------------~d~~~l~~ai~~ll~~~~~~~~m~~~~-------~-~~g~~~a 380 (403)
T 3ot5_A 330 TERPE----GI-EAGTLKLIG----------------TNKENLIKEALDLLDNKESHDKMAQAA-------N-PYGDGFA 380 (403)
T ss_dssp CSCHH----HH-HHTSEEECC----------------SCHHHHHHHHHHHHHCHHHHHHHHHSC-------C-TTCCSCH
T ss_pred Ccchh----he-eCCcEEEcC----------------CCHHHHHHHHHHHHcCHHHHHHHHhhc-------C-cccCCcH
Confidence 77664 33 678776662 378999999999998873333332221 1 1245677
Q ss_pred hHHHHHHHHHHHH
Q 042970 469 SYNNIQLFFQDIM 481 (489)
Q Consensus 469 ~~~~~~~~~~~~~ 481 (489)
+.+.++.+.+.+.
T Consensus 381 a~rI~~~l~~~l~ 393 (403)
T 3ot5_A 381 ANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC
Confidence 6666666665554
No 31
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.25 E-value=9.7e-10 Score=111.99 Aligned_cols=374 Identities=13% Similarity=0.026 Sum_probs=185.3
Q ss_pred CCCCCCCcEEEEecCC---------------CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhC--CCc
Q 042970 1 MASEASEFHILLLPFL---------------AQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQS--GLQ 63 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p---------------~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~--~~~ 63 (489)
|..|..+|||++++.. ..|.-.....|++.|.++||+|++++.................. ..+
T Consensus 1 m~~m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~g 80 (499)
T 2r60_A 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNK 80 (499)
T ss_dssp ------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSS
T ss_pred CccccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCC
Confidence 6666667999999852 35777889999999999999999997643221100000000000 236
Q ss_pred eEEEEeeCCcccCCCCCCCCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCc--chHHHHHHcCCC
Q 042970 64 IRLVEIQFPWQEAGLPQGCENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYP--WTVDTAAKFNVP 141 (489)
Q Consensus 64 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~--~~~~~A~~lgIP 141 (489)
+.++.++... ...... ........ .....+.+++++...+||+|.+..... .+..++..+|+|
T Consensus 81 v~v~~~~~~~------~~~~~~--~~~~~~~~-------~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p 145 (499)
T 2r60_A 81 VRIVRIPFGG------DKFLPK--EELWPYLH-------EYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLP 145 (499)
T ss_dssp EEEEEECCSC------SSCCCG--GGCGGGHH-------HHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCC
T ss_pred eEEEEecCCC------cCCcCH--HHHHHHHH-------HHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCc
Confidence 7777776321 100000 00011111 112234455554224899998765322 345567888999
Q ss_pred cEEEecchHHHHHHHhhhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecCh
Q 042970 142 RIVFHGFSCFCLFCLHILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTV 221 (489)
Q Consensus 142 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~ 221 (489)
+|........... ... ...+.... .+. ....+...........+.++.++..+-
T Consensus 146 ~v~~~H~~~~~~~--~~~----------------~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~ad~vi~~S~ 199 (499)
T 2r60_A 146 FTFTGHSLGAQKM--EKL----------------NVNTSNFK------EMD--ERFKFHRRIIAERLTMSYADKIIVSTS 199 (499)
T ss_dssp EEEECSSCHHHHH--HTT----------------CCCSTTSH------HHH--HHHCHHHHHHHHHHHHHHCSEEEESSH
T ss_pred EEEEccCcccccc--hhh----------------ccCCCCcc------hhh--hhHHHHHHHHHHHHHHhcCCEEEECCH
Confidence 9875443322110 000 00000000 000 000000011111234567888888775
Q ss_pred hhhhhHHHHHHHhh--cC--------CceEEeCcccCCCccchhhhhcCCCCCCCc----hhhhhhcc-----CCCCCeE
Q 042970 222 EELESAYFREYKNA--KQ--------GKVWCIGPVSLCNKESIDKVERGNKAAIDV----PECLTWLD-----SQQPSSV 282 (489)
Q Consensus 222 ~~l~~~~~~~~~~~--~~--------~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~-----~~~~~~v 282 (489)
...+ .+... ++ .++..|..-+....-. . ... ..+..-+. ...++ .
T Consensus 200 ~~~~-----~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~---------~-~~~~~~~~~~r~~~~~~~~~~~~~~-~ 263 (499)
T 2r60_A 200 QERF-----GQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFD---------G-EYGDKIKAKITKYLERDLGSERMEL-P 263 (499)
T ss_dssp HHHH-----HTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSS---------S-CCCHHHHHHHHHHHHHHSCGGGTTS-C
T ss_pred HHHH-----HHHhhhcccccccccCCCCeEEECCCcChhhcC---------c-cchhhhHHHHHHHhcccccccCCCC-c
Confidence 4322 11121 21 2344444221111000 0 000 12222221 11122 3
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCC-----CCEEEEEecCCch---------hh---hhhhhchhhHHHHhc-CCCeE
Q 042970 283 VYVCLGSICNLTSSQLIELGLGLEASK-----KPFIWVTRVGNKL---------EE---LEKWLVEENFEERIK-GRGLL 344 (489)
Q Consensus 283 Vyvs~GS~~~~~~~~~~~~~~al~~~~-----~~~v~~~~~~~~~---------~~---~~~~~l~~~~~~~~~-~~~~~ 344 (489)
+++..|++.. .+.+..+++++.... ...++.+|..... .+ ..+ +- .+..+.. .+++.
T Consensus 264 ~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~--l~-~~~~~~~l~~~V~ 338 (499)
T 2r60_A 264 AIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGK--II-ELIDNNDCRGKVS 338 (499)
T ss_dssp EEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHH--HH-HHHHHTTCBTTEE
T ss_pred EEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHH--HH-HHHHhcCCCceEE
Confidence 5566777643 345666777777552 2234455541110 00 001 11 1111111 56899
Q ss_pred EecccchH---hhhcCC----Ccccccccc---C-hhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCC
Q 042970 345 IRGWVPQV---MILSHP----AVGGFLTHC---G-WNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVP 413 (489)
Q Consensus 345 v~~~~pq~---~ll~~~----~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~ 413 (489)
+.+++|+. .++..+ ++ +|.-. | -+++.||+++|+|+|+... ......+ +.-+.|..++.
T Consensus 339 ~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~~--- 408 (499)
T 2r60_A 339 MFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVDP--- 408 (499)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEECT---
T ss_pred ECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeCC---
Confidence 99999765 467778 87 76432 3 3588999999999999753 3455555 35557877754
Q ss_pred ccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHH
Q 042970 414 LKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEEL 458 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~ 458 (489)
-+.+++.++|.++++|++..+.+.+++++....
T Consensus 409 ------------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 409 ------------EDPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp ------------TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 478999999999999886666676666665544
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.22 E-value=1.2e-09 Score=107.11 Aligned_cols=141 Identities=15% Similarity=0.145 Sum_probs=89.2
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEecCCchhhhhhhhchhhHHHHhc-CCCeEEecccch-
Q 042970 279 PSSVVYVCLGSICNLTSSQLIELGLGLEA-----SKKPFIWVTRVGNKLEELEKWLVEENFEERIK-GRGLLIRGWVPQ- 351 (489)
Q Consensus 279 ~~~vVyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~v~~~~pq- 351 (489)
++++|+++.|...... +.+..+++++.. .+.++++..+.+. . +-+.+.+... .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--~------~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--N------VREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--H------HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--H------HHHHHHHHhhcCCCEEEeCCCCHH
Confidence 3567888888765432 344455555543 2455555433221 0 1111211111 368998666654
Q ss_pred --HhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHH
Q 042970 352 --VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKD 429 (489)
Q Consensus 352 --~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~ 429 (489)
..+++.+++ ||+.+| +.+.||+++|+|+|+.+..+++. .+. +.|.|+.++ . +++
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v-~~g~g~lv~---------------~-d~~ 330 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAV-TAGTVRLVG---------------T-DKQ 330 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHH-HHTSEEEEC---------------S-SHH
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcc----hhh-hCCceEEeC---------------C-CHH
Confidence 567889999 999986 34889999999999998754433 343 567887763 2 789
Q ss_pred HHHHHHHHhccCChhHHHHHHHH
Q 042970 430 DVETAINILMDDGEERDVRRKRA 452 (489)
Q Consensus 430 ~l~~ai~~il~~~~~~~~~~~~a 452 (489)
+|.++|.++++|++..+.+.+++
T Consensus 331 ~la~~i~~ll~d~~~~~~~~~~~ 353 (384)
T 1vgv_A 331 RIVEEVTRLLKDENEYQAMSRAH 353 (384)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSSC
T ss_pred HHHHHHHHHHhChHHHhhhhhcc
Confidence 99999999999874444444444
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.21 E-value=2.5e-09 Score=105.26 Aligned_cols=329 Identities=12% Similarity=0.081 Sum_probs=168.5
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhHHHHHHHhhhCCCceEE-EEeeCCcccCCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANH-RAIVTIVTTPVNAARLKTVLARAVQSGLQIRL-VEIQFPWQEAGLPQGC 82 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~r-GH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~ 82 (489)
++++||++++ +++....=+-.|.++|.++ |+++.++.+....+......+. .+++. +.+. +...
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~-----~~i~~~~~l~-------~~~~- 88 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL-----FSITPDFDLN-------IMEP- 88 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH-----TTCCCSEECC-------CCCT-
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-----cCCCCceeee-------cCCC-
Confidence 4567877765 6666777788899999987 8898755544332211111111 12210 1111 1000
Q ss_pred CCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECC--CC-cchHHHHHHcCCCcEEEecchHHHHHHHhhh
Q 042970 83 ENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDM--GY-PWTVDTAAKFNVPRIVFHGFSCFCLFCLHIL 159 (489)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~--~~-~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~ 159 (489)
. ..... .+......+.+++++ .+||+|++-. .. +.+..+|..+|||++.+... ...
T Consensus 89 -----~--~~~~~----~~~~~~~~l~~~l~~--~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag-~rs------- 147 (396)
T 3dzc_A 89 -----G--QTLNG----VTSKILLGMQQVLSS--EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG-LRT------- 147 (396)
T ss_dssp -----T--CCHHH----HHHHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCC-CCC-------
T ss_pred -----C--CCHHH----HHHHHHHHHHHHHHh--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC-ccc-------
Confidence 0 01111 223345577788888 8999998632 22 34577899999998753210 000
Q ss_pred hhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCCh-HHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcC-
Q 042970 160 RDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDM-KDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQ- 237 (489)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~- 237 (489)
. ... ..+ ....+.+. ...++.++..+-..-+ .+ .....+
T Consensus 148 ---------------~---~~~---------------~~~~~~~~r~~~--~~~a~~~~~~se~~~~--~l--~~~G~~~ 188 (396)
T 3dzc_A 148 ---------------G---NIY---------------SPWPEEGNRKLT--AALTQYHFAPTDTSRA--NL--LQENYNA 188 (396)
T ss_dssp ---------------S---CTT---------------SSTTHHHHHHHH--HHTCSEEEESSHHHHH--HH--HHTTCCG
T ss_pred ---------------c---ccc---------------cCCcHHHHHHHH--HHhcCEEECCCHHHHH--HH--HHcCCCc
Confidence 0 000 001 11222211 2345566665533211 11 112222
Q ss_pred CceEEeCcccCCCcc-chhhhhcCCCCCCCchhhhhhcc-CCCCCeEEEEEeCCcccCCHHHHHHHHHHHHh-----CCC
Q 042970 238 GKVWCIGPVSLCNKE-SIDKVERGNKAAIDVPECLTWLD-SQQPSSVVYVCLGSICNLTSSQLIELGLGLEA-----SKK 310 (489)
Q Consensus 238 ~~~~~vGp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~-----~~~ 310 (489)
.+++.+|....+... ..+...... ....++.+.+. -.+++++|+++.+-...... .+..+++++.. .+.
T Consensus 189 ~ki~vvGn~~~d~~~~~~~~~~~~~---~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~ 264 (396)
T 3dzc_A 189 ENIFVTGNTVIDALLAVREKIHTDM---DLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPEC 264 (396)
T ss_dssp GGEEECCCHHHHHHHHHHHHHHHCH---HHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTE
T ss_pred CcEEEECCcHHHHHHHhhhhcccch---hhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCc
Confidence 357888842211100 000000000 00022222232 11335677776532222222 34556666654 355
Q ss_pred CEEEEEecCCchhhhhhhhchhhHHHHh-cCCCeEEecccc---hHhhhcCCCccccccccChhhHHHHHHhCCcEeecC
Q 042970 311 PFIWVTRVGNKLEELEKWLVEENFEERI-KGRGLLIRGWVP---QVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWP 386 (489)
Q Consensus 311 ~~v~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~v~~~~p---q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 386 (489)
++++..+.+.. +-..+.+.. ..+++++.++++ ...+++.+++ +|+-+| |.+.||.++|+|+|+..
T Consensus 265 ~~v~~~g~~~~--------~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~ 333 (396)
T 3dzc_A 265 QILYPVHLNPN--------VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMR 333 (396)
T ss_dssp EEEEECCBCHH--------HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECC
T ss_pred eEEEEeCCChH--------HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEcc
Confidence 66665543211 111121111 246898877774 4568889999 999988 66679999999999986
Q ss_pred CcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCCh
Q 042970 387 LFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGE 443 (489)
Q Consensus 387 ~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~ 443 (489)
-..+++ .+. +.|.++.++ .++++|.+++.++++|++
T Consensus 334 ~~~~~~----e~v-~~G~~~lv~----------------~d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 334 ETTERP----EAV-AAGTVKLVG----------------TNQQQICDALSLLLTDPQ 369 (396)
T ss_dssp SSCSCH----HHH-HHTSEEECT----------------TCHHHHHHHHHHHHHCHH
T ss_pred CCCcch----HHH-HcCceEEcC----------------CCHHHHHHHHHHHHcCHH
Confidence 555553 243 668775542 368999999999999873
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.19 E-value=1.2e-08 Score=100.55 Aligned_cols=333 Identities=11% Similarity=0.067 Sum_probs=176.2
Q ss_pred CcEEEEecCCC-ccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCC
Q 042970 7 EFHILLLPFLA-QGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENF 85 (489)
Q Consensus 7 ~~~vl~~~~p~-~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (489)
++++....+|. .|.-.-...|++.|+++||+|++++...... .. ....++.++.++.+... ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~-------~~~~~i~~~~~~~~~~~--------~~ 78 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN-------KVYPNIYFHEVTVNQYS--------VF 78 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------------CCCTTEEEECCCCC------------C
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc-------ccCCceEEEeccccccc--------cc
Confidence 57788888774 5667788899999999999999998753211 10 11235666655421110 00
Q ss_pred CCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCc--chHHHHHH-c--CCCcEEEecchHHHHHHHhhhh
Q 042970 86 DMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYP--WTVDTAAK-F--NVPRIVFHGFSCFCLFCLHILR 160 (489)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~--~~~~~A~~-l--gIP~v~l~~~~~~~~~~~~~~~ 160 (489)
. ..... . .....+.+++++ .+||+|++..... ....++.. + ++|++..........
T Consensus 79 ~-~~~~~-~--------~~~~~l~~~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------- 139 (394)
T 2jjm_A 79 Q-YPPYD-L--------ALASKMAEVAQR--ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------- 139 (394)
T ss_dssp C-SCCHH-H--------HHHHHHHHHHHH--HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-------
T ss_pred c-ccccc-H--------HHHHHHHHHHHH--cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-------
Confidence 0 00000 0 122345666777 7999999875433 23334443 3 599887544321110
Q ss_pred hcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcC--C
Q 042970 161 DSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQ--G 238 (489)
Q Consensus 161 ~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~--~ 238 (489)
.+... .+.... ...++.++.++..+-...+ .+...++ .
T Consensus 140 -----------------~~~~~---------------~~~~~~---~~~~~~ad~ii~~s~~~~~-----~~~~~~~~~~ 179 (394)
T 2jjm_A 140 -----------------LGSDP---------------SLNNLI---RFGIEQSDVVTAVSHSLIN-----ETHELVKPNK 179 (394)
T ss_dssp -----------------TTTCT---------------TTHHHH---HHHHHHSSEEEESCHHHHH-----HHHHHTCCSS
T ss_pred -----------------cCCCH---------------HHHHHH---HHHHhhCCEEEECCHHHHH-----HHHHhhCCcc
Confidence 00000 011111 1235667888877754332 2222222 3
Q ss_pred ceEEeCcccCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHh----CCCCEEE
Q 042970 239 KVWCIGPVSLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA----SKKPFIW 314 (489)
Q Consensus 239 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~----~~~~~v~ 314 (489)
++..|..-.....-.. .....+..-+...+ ...+++..|++.. .+.+..++++++. .+.++++
T Consensus 180 ~~~vi~ngv~~~~~~~----------~~~~~~~~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i 246 (394)
T 2jjm_A 180 DIQTVYNFIDERVYFK----------RDMTQLKKEYGISE-SEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLLL 246 (394)
T ss_dssp CEEECCCCCCTTTCCC----------CCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEEE
T ss_pred cEEEecCCccHHhcCC----------cchHHHHHHcCCCC-CCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEEE
Confidence 5655554322111000 01122222222111 2235566677653 2233444444442 2444444
Q ss_pred EEecCCchhhhhhhhchhhHHHHhc-CCCeEEecccch-HhhhcCCCccccc----cccChhhHHHHHHhCCcEeecCCc
Q 042970 315 VTRVGNKLEELEKWLVEENFEERIK-GRGLLIRGWVPQ-VMILSHPAVGGFL----THCGWNSSLEGISAGVQMLTWPLF 388 (489)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~v~~~~pq-~~ll~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~~ 388 (489)
+|.+.....+.+ ...+.. .+++.+.++..+ ..++..+++ +| .-|.-+++.||+++|+|+|+.+..
T Consensus 247 -~G~g~~~~~l~~------~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~ 317 (394)
T 2jjm_A 247 -VGDGPEFCTILQ------LVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG 317 (394)
T ss_dssp -ECCCTTHHHHHH------HHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT
T ss_pred -ECCchHHHHHHH------HHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC
Confidence 443332221111 111111 357877777654 568889998 77 456667899999999999998653
Q ss_pred CcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 042970 389 GDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFE 456 (489)
Q Consensus 389 ~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~ 456 (489)
.....+ +..+.|...+. -+.+++.++|.++++|++..+.+.+++++..
T Consensus 318 ----~~~e~v-~~~~~g~~~~~---------------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 318 ----GIPEVI-QHGDTGYLCEV---------------GDTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp ----TSTTTC-CBTTTEEEECT---------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ----ChHHHh-hcCCceEEeCC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 233334 34557777753 3789999999999998866666777766655
No 35
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.16 E-value=7.1e-09 Score=102.91 Aligned_cols=93 Identities=13% Similarity=-0.020 Sum_probs=67.8
Q ss_pred CCCeEEecccc---h---HhhhcCCCcccccccc----ChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEec
Q 042970 340 GRGLLIRGWVP---Q---VMILSHPAVGGFLTHC----GWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVG 409 (489)
Q Consensus 340 ~~~~~v~~~~p---q---~~ll~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~ 409 (489)
.+++.+.+|++ + ..++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+ +..+.|...
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE-
Confidence 57899988776 2 457788888 77654 45688999999999999764 3455555 355567666
Q ss_pred ccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 042970 410 VEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFE 456 (489)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~ 456 (489)
. +.+++.++|.++++|++..+.+.+++++..
T Consensus 364 ---------------~-d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 364 ---------------R-DANEAVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp ---------------S-SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ---------------C-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 2 678899999999998866666666665544
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.13 E-value=7.2e-09 Score=101.22 Aligned_cols=331 Identities=13% Similarity=0.062 Sum_probs=169.7
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCCcchhhHHHHHHHhhhCCCceEE-EEeeCCcccCCCCC
Q 042970 4 EASEFHILLLPFLAQGHLIPMFDMARLLANH-R-AIVTIVTTPVNAARLKTVLARAVQSGLQIRL-VEIQFPWQEAGLPQ 80 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~r-G-H~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~ 80 (489)
|+++|||++++ ++.++......|+++|+++ | |+|+++++....+......... ++.. +.+. ...
T Consensus 5 m~~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-------~~~ 71 (375)
T 3beo_A 5 MTERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIF-----GITPDFDLN-------IMK 71 (375)
T ss_dssp CSSCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHH-----TCCCSEECC-------CCC
T ss_pred CCcCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHc-----CCCCccccc-------cCC
Confidence 45578999997 4467788888999999987 5 8887776654333222211111 2221 1111 000
Q ss_pred CCCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCc---chHHHHHHcCCCcEEEecchHHHHHHHh
Q 042970 81 GCENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYP---WTVDTAAKFNVPRIVFHGFSCFCLFCLH 157 (489)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~---~~~~~A~~lgIP~v~l~~~~~~~~~~~~ 157 (489)
.. . +...... .....+.+++++ .+||+|++..... .+..++...|+|++.+.... .
T Consensus 72 --~~---~---~~~~~~~----~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~------ 130 (375)
T 3beo_A 72 --DR---Q---TLIDITT----RGLEGLDKVMKE--AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-R------ 130 (375)
T ss_dssp --TT---C---CHHHHHH----HHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-C------
T ss_pred --Cc---c---cHHHHHH----HHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-c------
Confidence 00 0 1111111 123356677777 7999999854321 34467888999998632110 0
Q ss_pred hhhhcccCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcC
Q 042970 158 ILRDSKVHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQ 237 (489)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~ 237 (489)
. .. .... ......... ..+.++.++..+-...+ .+. ....+
T Consensus 131 --------------~----~~-~~~~--------------~~~~~~~~~--~~~~~d~ii~~s~~~~~--~~~--~~g~~ 171 (375)
T 3beo_A 131 --------------T----WD-KYSP--------------YPEEMNRQL--TGVMADLHFSPTAKSAT--NLQ--KENKD 171 (375)
T ss_dssp --------------C----SC-TTSS--------------TTHHHHHHH--HHHHCSEEEESSHHHHH--HHH--HTTCC
T ss_pred --------------c----cc-ccCC--------------ChhHhhhhH--HhhhhheeeCCCHHHHH--HHH--HcCCC
Confidence 0 00 0000 001111111 11236677766644322 111 11121
Q ss_pred -CceEEeCcc-cCCCccchhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHh-----CCC
Q 042970 238 -GKVWCIGPV-SLCNKESIDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEA-----SKK 310 (489)
Q Consensus 238 -~~~~~vGp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~-----~~~ 310 (489)
.++..+|.- ..... .. ... ....++..-+ +++++|+++.|...... +.+..++++++. .+.
T Consensus 172 ~~~i~vi~n~~~d~~~-----~~-~~~--~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~ 239 (375)
T 3beo_A 172 ESRIFITGNTAIDALK-----TT-VKE--TYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDV 239 (375)
T ss_dssp GGGEEECCCHHHHHHH-----HH-CCS--SCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTE
T ss_pred cccEEEECChhHhhhh-----hh-hhh--hhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCe
Confidence 246666632 11000 00 000 0011222222 23457777777754322 345556666653 244
Q ss_pred CEEEEEecCCchhhhhhhhchhhHHHHhc-CCCeEEecccch---HhhhcCCCccccccccChhhHHHHHHhCCcEeecC
Q 042970 311 PFIWVTRVGNKLEELEKWLVEENFEERIK-GRGLLIRGWVPQ---VMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWP 386 (489)
Q Consensus 311 ~~v~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~v~~~~pq---~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 386 (489)
++++ +.+... .+. ..+.+... .+++++.+++++ ..+++.+++ ||+.+| +.+.||+++|+|+|+..
T Consensus 240 ~~i~--~~g~~~-~~~-----~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~ 308 (375)
T 3beo_A 240 QVVY--PVHMNP-VVR-----ETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLR 308 (375)
T ss_dssp EEEE--ECCSCH-HHH-----HHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECS
T ss_pred EEEE--eCCCCH-HHH-----HHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEec
Confidence 5443 322211 111 11111112 368998777765 467888998 998874 45889999999999985
Q ss_pred CcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHH
Q 042970 387 LFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKR 451 (489)
Q Consensus 387 ~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~ 451 (489)
..+..+ .+. +.|.|+.++ .++++|.++|.++++|++..+.+.++
T Consensus 309 ~~~~~~----e~v-~~g~g~~v~----------------~d~~~la~~i~~ll~~~~~~~~~~~~ 352 (375)
T 3beo_A 309 DTTERP----EGI-EAGTLKLAG----------------TDEETIFSLADELLSDKEAHDKMSKA 352 (375)
T ss_dssp SCCSCH----HHH-HTTSEEECC----------------SCHHHHHHHHHHHHHCHHHHHHHCCC
T ss_pred CCCCCc----eee-cCCceEEcC----------------CCHHHHHHHHHHHHhChHhHhhhhhc
Confidence 433332 233 567777663 27899999999999987433333333
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.12 E-value=9e-08 Score=93.25 Aligned_cols=147 Identities=12% Similarity=0.159 Sum_probs=97.8
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCC----C-EEEEEecCCchhhhhhhhchhhHHHHhc-CCCeEEecccch-Hhh
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEASKK----P-FIWVTRVGNKLEELEKWLVEENFEERIK-GRGLLIRGWVPQ-VMI 354 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~~~----~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~v~~~~pq-~~l 354 (489)
.+++..|+... .+.+..+++++..... . -++.+|.+. ...+.+ +..+.. .+++.+.++..+ ..+
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~-~~~~~~------~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK-PRKFEA------LAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC-CHHHHH------HHHHHTCGGGEEEESCCSCHHHH
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC-HHHHHH------HHHHcCCCCcEEECCCcccHHHH
Confidence 56677777653 3456666777776522 2 233344332 221211 111121 468988888654 668
Q ss_pred hcCCCcccccc----ccChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHH
Q 042970 355 LSHPAVGGFLT----HCGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDD 430 (489)
Q Consensus 355 l~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~ 430 (489)
+..+++ +|. -|.-+++.||+++|+|+|+... ..+...+ +..+.|..++.. -+.++
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~--------------~~~~~ 326 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEP--------------FSQEQ 326 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSS--------------CCHHH
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCC--------------CCHHH
Confidence 888998 775 4566789999999999999765 3456677 588889888522 48899
Q ss_pred HHHHHHHhccCChhHHHHHHHHHHHHHH
Q 042970 431 VETAINILMDDGEERDVRRKRAKEFEEL 458 (489)
Q Consensus 431 l~~ai~~il~~~~~~~~~~~~a~~l~~~ 458 (489)
+.++|.++++|++..+.+.+++++....
T Consensus 327 l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 327 LNEVLRKALTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 9999999999887666777777666554
No 38
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.11 E-value=3.9e-09 Score=101.82 Aligned_cols=125 Identities=13% Similarity=0.130 Sum_probs=82.3
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchH---hhhcCCC
Q 042970 283 VYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQV---MILSHPA 359 (489)
Q Consensus 283 Vyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~---~ll~~~~ 359 (489)
+++..|++. ..+.+..++++++.++.++++.-.+ .....+.+ +..+. .+++.+.+|+++. .++..++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g-~~~~~l~~------~~~~~-~~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPA-WEPEYFDE------ITRRY-GSTVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCC-CCHHHHHH------HHHHH-TTTEEECCCCCHHHHHHHHHHCS
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCc-ccHHHHHH------HHHHh-CCCEEEeccCCHHHHHHHHHhCC
Confidence 344567755 3445667777777777776665433 32222211 22222 3799999999976 6888899
Q ss_pred cccccc-------------ccC-hhhHHHHHHhCCcEeecCCcCcchhhHHHHHHH--hcceeEecccCCcccccccccc
Q 042970 360 VGGFLT-------------HCG-WNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEV--LRIGVSVGVEVPLKFGEEEKIG 423 (489)
Q Consensus 360 ~~~~I~-------------HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~--~g~G~~l~~~~~~~~~~~~~~~ 423 (489)
+ +|. +-| -+++.||+++|+|+|+... ..+...+ +. -+.|... .
T Consensus 234 v--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~--~------------ 292 (342)
T 2iuy_A 234 A--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGT--D------------ 292 (342)
T ss_dssp E--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSS--C------------
T ss_pred E--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEc--C------------
Confidence 8 663 233 4578999999999999865 3355555 34 3456544 2
Q ss_pred ccccHHHHHHHHHHhcc
Q 042970 424 VLVKKDDVETAINILMD 440 (489)
Q Consensus 424 ~~~~~~~l~~ai~~il~ 440 (489)
. +.+++.++|.++++
T Consensus 293 -~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 293 -F-APDEARRTLAGLPA 307 (342)
T ss_dssp -C-CHHHHHHHHHTSCC
T ss_pred -C-CHHHHHHHHHHHHH
Confidence 5 88999999999985
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.01 E-value=2.2e-08 Score=97.84 Aligned_cols=351 Identities=15% Similarity=0.104 Sum_probs=183.1
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh-hHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAA-RLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENF 85 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (489)
+++|++ .+|++-.+.-+-+|.++|.++ +++.++.+....+ .+..... . +|. |+.|.+. +..+
T Consensus 9 ~~~~~~-v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~--~~~---i~~~~~~--l~~~---- 71 (385)
T 4hwg_A 9 MLKVMT-IVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----D--DMG---IRKPDYF--LEVA---- 71 (385)
T ss_dssp CCEEEE-EECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C---CC---CCCCSEE--CCCC----
T ss_pred hhheeE-EEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----h--hCC---CCCCcee--cCCC----
Confidence 456555 467888888888899999887 8887776653322 2222110 1 111 1211111 1111
Q ss_pred CCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEE--CCCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhhhcc
Q 042970 86 DMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIIS--DMGYPWTVDTAAKFNVPRIVFHGFSCFCLFCLHILRDSK 163 (489)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~--D~~~~~~~~~A~~lgIP~v~l~~~~~~~~~~~~~~~~~~ 163 (489)
.. .. ...+......+.+++++ .+||+|++ |....++..+|.++|||.+.+... ..
T Consensus 72 -~~---~~----~~~~~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag-lr------------ 128 (385)
T 4hwg_A 72 -AD---NT----AKSIGLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG-NR------------ 128 (385)
T ss_dssp -CC---CS----HHHHHHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC-CC------------
T ss_pred -CC---CH----HHHHHHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC-Cc------------
Confidence 00 11 12223345577788888 89999885 333445588999999997653210 00
Q ss_pred cCCCCCCCCccccCCCCCCCccccccCCCCCCCCChHHHHHHHHHhcccCcEEEecChhhhhhHHHHHHHhhcC-CceEE
Q 042970 164 VHENVTSDSEYFKVPGLPDQIEFTKVQLPIFPSDDMKDINEQMLAADKKTFGIIINTVEELESAYFREYKNAKQ-GKVWC 242 (489)
Q Consensus 164 ~~~~~~~~~~~~~~p~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~~~l~~~~~~~~~~~~~-~~~~~ 242 (489)
... . .+| .+..+.+.. ..++.++..+-..-+ . ..+...+ .+++.
T Consensus 129 ------s~~--~---~~p------------------ee~nR~~~~--~~a~~~~~~te~~~~--~--l~~~G~~~~~I~v 173 (385)
T 4hwg_A 129 ------CFD--Q---RVP------------------EEINRKIID--HISDVNITLTEHARR--Y--LIAEGLPAELTFK 173 (385)
T ss_dssp ------CSC--T---TST------------------HHHHHHHHH--HHCSEEEESSHHHHH--H--HHHTTCCGGGEEE
T ss_pred ------ccc--c---cCc------------------HHHHHHHHH--hhhceeecCCHHHHH--H--HHHcCCCcCcEEE
Confidence 000 0 011 112222211 234455555533211 1 1122222 36888
Q ss_pred eCcccCCCccc-hhhhhcCCCCCCCchhhhhhccCCCCCeEEEEEeCCcccCC-HHHHHHHHHHHHhC----CCCEEEEE
Q 042970 243 IGPVSLCNKES-IDKVERGNKAAIDVPECLTWLDSQQPSSVVYVCLGSICNLT-SSQLIELGLGLEAS----KKPFIWVT 316 (489)
Q Consensus 243 vGp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyvs~GS~~~~~-~~~~~~~~~al~~~----~~~~v~~~ 316 (489)
+|-...+.... .... ...++.+.+.-.+ ++.|+++.|...+.+ .+.+..+++++... +..+|+..
T Consensus 174 tGnp~~D~~~~~~~~~--------~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~ 244 (385)
T 4hwg_A 174 SGSHMPEVLDRFMPKI--------LKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFST 244 (385)
T ss_dssp CCCSHHHHHHHHHHHH--------HHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred ECCchHHHHHHhhhhc--------chhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 88422211000 0000 0122333333222 458889988765433 34566677776643 56677655
Q ss_pred ecCCchhhhhhhhchhhHHHHhcCCCeEEecccc---hHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCcchh
Q 042970 317 RVGNKLEELEKWLVEENFEERIKGRGLLIRGWVP---QVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQFC 393 (489)
Q Consensus 317 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~p---q~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~ 393 (489)
... ....+.+ . .++ ....+|+++.+.++ ...+++.+++ +|+-.|. .+.||...|+|+|+++...+-+.
T Consensus 245 ~p~-~~~~l~~--~-~~~--~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e 315 (385)
T 4hwg_A 245 HPR-TKKRLED--L-EGF--KELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE 315 (385)
T ss_dssp CHH-HHHHHHT--S-GGG--GGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH
T ss_pred ChH-HHHHHHH--H-HHH--hcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh
Confidence 421 1111111 0 000 00135888866554 4568899999 9999875 46899999999999987554222
Q ss_pred hHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHH-hhCCChHHH
Q 042970 394 NEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRAL-EEGGSSYNN 472 (489)
Q Consensus 394 na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~-~~gg~~~~~ 472 (489)
.+ +.|.++.++ .++++|.+++.++++|++..+.+++++.. . .+|+++.+.
T Consensus 316 ---~v--~~G~~~lv~----------------~d~~~i~~ai~~ll~d~~~~~~m~~~~~~--------~~g~g~aa~rI 366 (385)
T 4hwg_A 316 ---GM--DAGTLIMSG----------------FKAERVLQAVKTITEEHDNNKRTQGLVPD--------YNEAGLVSKKI 366 (385)
T ss_dssp ---HH--HHTCCEECC----------------SSHHHHHHHHHHHHTTCBTTBCCSCCCHH--------HHTCCCHHHHH
T ss_pred ---hh--hcCceEEcC----------------CCHHHHHHHHHHHHhChHHHHHhhccCCC--------CCCCChHHHHH
Confidence 23 678776552 47899999999999987543333333321 2 346666665
Q ss_pred HHHHHHH
Q 042970 473 IQLFFQD 479 (489)
Q Consensus 473 ~~~~~~~ 479 (489)
++.+.+.
T Consensus 367 ~~~l~~~ 373 (385)
T 4hwg_A 367 LRIVLSY 373 (385)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.69 E-value=2.2e-06 Score=86.69 Aligned_cols=141 Identities=10% Similarity=-0.022 Sum_probs=82.9
Q ss_pred EEEEeCCccc-CCHHHHHHHHHHHHhCCCCEEEEEecCCc-hhhhhhhhchhhHHHHhcCCCeE-EecccchH--hhhcC
Q 042970 283 VYVCLGSICN-LTSSQLIELGLGLEASKKPFIWVTRVGNK-LEELEKWLVEENFEERIKGRGLL-IRGWVPQV--MILSH 357 (489)
Q Consensus 283 Vyvs~GS~~~-~~~~~~~~~~~al~~~~~~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~-v~~~~pq~--~ll~~ 357 (489)
+++..|.+.. -..+.+.+.+..+.+.+.+++++-.+... ...+.+ +..+. ++++. +.++.... .++..
T Consensus 293 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~------~~~~~-~~~v~~~~g~~~~~~~~~~~~ 365 (485)
T 1rzu_A 293 LFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLA------AASRH-HGRVGVAIGYNEPLSHLMQAG 365 (485)
T ss_dssp EEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHH------HHHHT-TTTEEEEESCCHHHHHHHHHH
T ss_pred EEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHH------HHHhC-CCcEEEecCCCHHHHHHHHhc
Confidence 6677788764 22333333334443446666655433210 111111 11111 36786 67884332 57888
Q ss_pred CCccccccc----cChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHh---------cceeEecccCCccccccccccc
Q 042970 358 PAVGGFLTH----CGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVL---------RIGVSVGVEVPLKFGEEEKIGV 424 (489)
Q Consensus 358 ~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~---------g~G~~l~~~~~~~~~~~~~~~~ 424 (489)
+++ +|.- |--++++||+++|+|+|+... ..+...+ +.- +.|...+.
T Consensus 366 adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~-------------- 424 (485)
T 1rzu_A 366 CDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP-------------- 424 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS--------------
T ss_pred CCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC--------------
Confidence 998 7743 334589999999999999754 3444444 233 57777753
Q ss_pred cccHHHHHHHHHHhc---cCChhHHHHHHHH
Q 042970 425 LVKKDDVETAINILM---DDGEERDVRRKRA 452 (489)
Q Consensus 425 ~~~~~~l~~ai~~il---~~~~~~~~~~~~a 452 (489)
-+.++++++|.+++ .|++..+.+.+++
T Consensus 425 -~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 454 (485)
T 1rzu_A 425 -VTLDGLKQAIRRTVRYYHDPKLWTQMQKLG 454 (485)
T ss_dssp -CSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 47899999999999 6774444444444
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.68 E-value=3.4e-06 Score=85.29 Aligned_cols=140 Identities=11% Similarity=-0.023 Sum_probs=81.5
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHH---hCCCCEEEEEecCC-chhhhhhhhchhhHHHHhcCCCeE-Eecccch--Hhh
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLE---ASKKPFIWVTRVGN-KLEELEKWLVEENFEERIKGRGLL-IRGWVPQ--VMI 354 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~---~~~~~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~-v~~~~pq--~~l 354 (489)
.+++..|.+.. .+.+..++++++ +.+.+++++-.+.. ....+.+ +..+. .+++. +.++... ..+
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~------~~~~~-~~~v~~~~g~~~~~~~~~ 363 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLA------AAAEY-PGQVGVQIGYHEAFSHRI 363 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHH------HHHHS-TTTEEEEESCCHHHHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHH------HHHhC-CCcEEEeCCCCHHHHHHH
Confidence 35556666543 233444444444 34666666544321 1111111 11111 36785 7788433 357
Q ss_pred hcCCCccccccc----cChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHh---------cceeEecccCCcccccccc
Q 042970 355 LSHPAVGGFLTH----CGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVL---------RIGVSVGVEVPLKFGEEEK 421 (489)
Q Consensus 355 l~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~---------g~G~~l~~~~~~~~~~~~~ 421 (489)
+..+++ +|.- |--+++.||+++|+|+|+... ..+...+ +.- +.|..++.
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~----------- 425 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFED----------- 425 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECS-----------
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECC-----------
Confidence 888998 7743 334578899999999999754 3344444 233 57777753
Q ss_pred ccccccHHHHHHHHHHhc---cCChhHHHHHHHH
Q 042970 422 IGVLVKKDDVETAINILM---DDGEERDVRRKRA 452 (489)
Q Consensus 422 ~~~~~~~~~l~~ai~~il---~~~~~~~~~~~~a 452 (489)
-+.++++++|.+++ .|++..+.+.+++
T Consensus 426 ----~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 455 (485)
T 2qzs_A 426 ----SNAWSLLRAIRRAFVLWSRPSLWRFVQRQA 455 (485)
T ss_dssp ----SSHHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 47899999999999 6764444444444
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.67 E-value=4.1e-06 Score=88.92 Aligned_cols=148 Identities=12% Similarity=0.062 Sum_probs=87.2
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhC-----CCCEEEEEecCC----chh---hhhhhhchhhHHHHhc-CCCeEEec-
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEAS-----KKPFIWVTRVGN----KLE---ELEKWLVEENFEERIK-GRGLLIRG- 347 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~----~~~---~~~~~~l~~~~~~~~~-~~~~~v~~- 347 (489)
.+++..|.+.. .+.+..+++|+... +.+++++-++.. ..+ ...+ +- .+..+.. .+++.+.+
T Consensus 573 ~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~--L~-~li~~lgL~~~V~flG~ 647 (816)
T 3s28_A 573 PILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKK--MY-DLIEEYKLNGQFRWISS 647 (816)
T ss_dssp CEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHH--HH-HHHHHTTCBBBEEEECC
T ss_pred eEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHH--HH-HHHHHcCCCCcEEEccC
Confidence 45567777653 34455666666544 345555543331 000 0000 11 1111222 46888877
Q ss_pred ---ccchHhhhc----CCCccccccc----cChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccc
Q 042970 348 ---WVPQVMILS----HPAVGGFLTH----CGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKF 416 (489)
Q Consensus 348 ---~~pq~~ll~----~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~ 416 (489)
++++.++.. .+++ ||.- |--.++.||+++|+|+|+. |.......+ +.-+.|+.++..
T Consensus 648 ~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv~p~----- 715 (816)
T 3s28_A 648 QMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHIDPY----- 715 (816)
T ss_dssp CCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEECTT-----
T ss_pred ccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEeCCC-----
Confidence 455555544 4566 6643 3345889999999999996 444455555 356678877643
Q ss_pred cccccccccccHHHHHHHHHHhc----cCChhHHHHHHHHHHHH
Q 042970 417 GEEEKIGVLVKKDDVETAINILM----DDGEERDVRRKRAKEFE 456 (489)
Q Consensus 417 ~~~~~~~~~~~~~~l~~ai~~il----~~~~~~~~~~~~a~~l~ 456 (489)
+.+.++++|.+++ .|++..+.+.+++++..
T Consensus 716 ----------D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 716 ----------HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp ----------SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 7888888886666 88876667776666654
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.60 E-value=1.3e-05 Score=78.96 Aligned_cols=149 Identities=14% Similarity=0.145 Sum_probs=84.7
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEecCCchh-hhhhhhchhhHHHHhc-CCC-------eEEe
Q 042970 281 SVVYVCLGSICNLTSSQLIELGLGLEA-----SKKPFIWVTRVGNKLE-ELEKWLVEENFEERIK-GRG-------LLIR 346 (489)
Q Consensus 281 ~vVyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~v~~~~~~~~~~-~~~~~~l~~~~~~~~~-~~~-------~~v~ 346 (489)
..+++..|.+.. .+.+..+++++.. .+.+++++-.+..... .+.+. + ..+..+.. .++ +.+.
T Consensus 184 ~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~-~-~~~~~~~~l~~~v~~l~~vv~~~ 259 (413)
T 3oy2_A 184 DVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSI-A-LRELVASGVDNVFTHLNKIMINR 259 (413)
T ss_dssp SEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHH-H-HHHHHHHTCSCHHHHHTTEEEEC
T ss_pred ceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHH-H-HHHHHHcCcccccccccceeecc
Confidence 356677787543 2334444444443 4677777655443210 00010 1 11111122 232 7778
Q ss_pred cccchH---hhhcCCCcccccc----ccChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcc---------------
Q 042970 347 GWVPQV---MILSHPAVGGFLT----HCGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRI--------------- 404 (489)
Q Consensus 347 ~~~pq~---~ll~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~--------------- 404 (489)
+|+++. .++..+++ +|. -|.-.++.||+++|+|+|+... ......+ +.-..
T Consensus 260 g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~~~i~~~~~~~~~~~~ 332 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SGDCVYKIKPSAWISVDDRD 332 (413)
T ss_dssp SCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CTTTSEEECCCEEEECTTTC
T ss_pred CcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-ccCccccccccccccccccc
Confidence 999854 46788888 763 2334589999999999999643 3333333 12111
Q ss_pred ee--EecccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 042970 405 GV--SVGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFE 456 (489)
Q Consensus 405 G~--~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~ 456 (489)
|. .+. .-+.+++.++| ++++|++..+.+.+++++..
T Consensus 333 G~~gl~~---------------~~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~ 370 (413)
T 3oy2_A 333 GIGGIEG---------------IIDVDDLVEAF-TFFKDEKNRKEYGKRVQDFV 370 (413)
T ss_dssp SSCCEEE---------------ECCHHHHHHHH-HHTTSHHHHHHHHHHHHHHH
T ss_pred CcceeeC---------------CCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHH
Confidence 44 443 24899999999 99998755555555555543
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.55 E-value=5.2e-05 Score=78.15 Aligned_cols=97 Identities=14% Similarity=0.079 Sum_probs=67.6
Q ss_pred CCeEEecccchH---hhhcCCCcccccc---ccChhhHHHHHHhCCcEeecCCcCcchhh-HHHHHHHhcceeEecccCC
Q 042970 341 RGLLIRGWVPQV---MILSHPAVGGFLT---HCGWNSSLEGISAGVQMLTWPLFGDQFCN-EKLIVEVLRIGVSVGVEVP 413 (489)
Q Consensus 341 ~~~~v~~~~pq~---~ll~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~~v~e~~g~G~~l~~~~~ 413 (489)
++|++.+++++. .++..+++ ||. .|+-+++.||+.+|+|+|+.|-..=.... +..+ +..|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc----
Confidence 689999999854 46788888 662 26667889999999999998743211112 3444 3556654331
Q ss_pred ccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 042970 414 LKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFE 456 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~ 456 (489)
-+.+.+.+++.++++|++..+.+++++++..
T Consensus 507 ------------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 507 ------------ADDAAFVAKAVALASDPAALTALHARVDVLR 537 (568)
T ss_dssp ------------SSHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 2788999999999998865566666655544
No 45
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.49 E-value=2e-05 Score=76.62 Aligned_cols=98 Identities=11% Similarity=0.107 Sum_probs=73.4
Q ss_pred CeEEecccch-HhhhcCCCccccccc-----cChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCcc
Q 042970 342 GLLIRGWVPQ-VMILSHPAVGGFLTH-----CGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLK 415 (489)
Q Consensus 342 ~~~v~~~~pq-~~ll~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~ 415 (489)
++++.++..+ ..+++.+++ ++.- +|..++.||+++|+|+|+-|...+.+.....+ ...|.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe-------
Confidence 5666665543 567888887 6542 23478999999999999888777777766666 356666544
Q ss_pred ccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 042970 416 FGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAK 460 (489)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 460 (489)
-+.++|.++|.++++| +..+.|.+++++..+.-.
T Consensus 331 ----------~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 331 ----------KNETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp ----------CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 2678999999999998 888899999988776644
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.47 E-value=1.3e-06 Score=75.32 Aligned_cols=133 Identities=10% Similarity=0.117 Sum_probs=87.6
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccch---HhhhcCC
Q 042970 283 VYVCLGSICNLTSSQLIELGLGLEAS-KKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQ---VMILSHP 358 (489)
Q Consensus 283 Vyvs~GS~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq---~~ll~~~ 358 (489)
+++..|++.. .+.+..++++++.. +.++++.-.+.. ...+.+ +...+ ...-.+|+.+.+|+++ ..++..+
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~-~~~l~~--~~~~~-~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSK-GDHAER--YARKI-MKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCT-TSTHHH--HHHHH-HHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCcc-HHHHHH--HHHhh-hcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4456677653 34566777777776 566666543332 222222 11100 1112569999999998 5688889
Q ss_pred Ccccccc---ccCh-hhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHH
Q 042970 359 AVGGFLT---HCGW-NSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETA 434 (489)
Q Consensus 359 ~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~a 434 (489)
++ +|. +.|+ .++.||+++|+|+|+.. ...+...+ +..+.|..+ . -+.+++.++
T Consensus 99 di--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i-~~~~~g~~~-~---------------~d~~~l~~~ 155 (177)
T 2f9f_A 99 KG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETV-INEKTGYLV-N---------------ADVNEIIDA 155 (177)
T ss_dssp SE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHC-CBTTTEEEE-C---------------SCHHHHHHH
T ss_pred CE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHh-cCCCccEEe-C---------------CCHHHHHHH
Confidence 98 775 3344 48999999999999974 34555556 466678777 3 478999999
Q ss_pred HHHhccCChh
Q 042970 435 INILMDDGEE 444 (489)
Q Consensus 435 i~~il~~~~~ 444 (489)
|.++++|++.
T Consensus 156 i~~l~~~~~~ 165 (177)
T 2f9f_A 156 MKKVSKNPDK 165 (177)
T ss_dssp HHHHHHCTTT
T ss_pred HHHHHhCHHH
Confidence 9999988853
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.18 E-value=0.00027 Score=69.54 Aligned_cols=75 Identities=11% Similarity=0.004 Sum_probs=57.9
Q ss_pred CCCeEEecccchHh---hhcCCCcccccc---ccCh-hhHHHHH-------HhCCcEeecCCcCcchhhHHHHHHHhcce
Q 042970 340 GRGLLIRGWVPQVM---ILSHPAVGGFLT---HCGW-NSSLEGI-------SAGVQMLTWPLFGDQFCNEKLIVEVLRIG 405 (489)
Q Consensus 340 ~~~~~v~~~~pq~~---ll~~~~~~~~I~---HgG~-~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~e~~g~G 405 (489)
.+|+.+.+++|+.+ ++..+++ +|. +.|+ +++.||+ ++|+|+|+... + +.-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 46899999998754 6788888 664 3344 5678999 99999999854 5 355567
Q ss_pred eE-ecccCCccccccccccccccHHHHHHHHHHhccCC
Q 042970 406 VS-VGVEVPLKFGEEEKIGVLVKKDDVETAINILMDDG 442 (489)
Q Consensus 406 ~~-l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~ 442 (489)
.. ++. -+.++++++|.++++|+
T Consensus 331 ~l~v~~---------------~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYTP---------------GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEECT---------------TCHHHHHHHHHHHHHCC
T ss_pred EEEeCC---------------CCHHHHHHHHHHHHhCc
Confidence 76 643 48899999999999987
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.89 E-value=0.0001 Score=62.37 Aligned_cols=145 Identities=14% Similarity=0.164 Sum_probs=87.8
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHHhCC----CCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchH---h
Q 042970 281 SVVYVCLGSICNLTSSQLIELGLGLEASK----KPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQV---M 353 (489)
Q Consensus 281 ~vVyvs~GS~~~~~~~~~~~~~~al~~~~----~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~---~ 353 (489)
+++++..|++.. .+.+..+++++..+. .++++ +|.+.....+.+ ...+. ..++.+ +|+|+. .
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~~~~~~~~------~~~~~-~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLL-KGKGPDEKKIKL------LAQKL-GVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEE-ECCSTTHHHHHH------HHHHH-TCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEE-EeCCccHHHHHH------HHHHc-CCeEEE-eecCHHHHHH
Confidence 357777888753 345666777777652 33333 333332222211 11111 237888 999874 4
Q ss_pred hhcCCCcccccc----ccChhhHHHHHHhCC-cEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccH
Q 042970 354 ILSHPAVGGFLT----HCGWNSSLEGISAGV-QMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKK 428 (489)
Q Consensus 354 ll~~~~~~~~I~----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~ 428 (489)
++..+++ +|. -|.-.++.||+++|+ |+|+....+ .....+ +..+. .+. .-+.
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~-~~~~~--~~~---------------~~~~ 127 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFA-LDERS--LFE---------------PNNA 127 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGC-SSGGG--EEC---------------TTCH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhc-cCCce--EEc---------------CCCH
Confidence 6788888 775 233458999999996 999943221 122222 22222 232 3588
Q ss_pred HHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Q 042970 429 DDVETAINILMDDGEERDVRRKRAKEFEELA 459 (489)
Q Consensus 429 ~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~ 459 (489)
+++.++|.++++|++..+.+.+++++..+.+
T Consensus 128 ~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 128 KDLSAKIDWWLENKLERERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHC
Confidence 9999999999999877777777777766443
No 49
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.62 E-value=0.0093 Score=60.61 Aligned_cols=136 Identities=8% Similarity=-0.010 Sum_probs=73.7
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHH---hCCCCEEEEEecCCchhhhhhhhchhhHHH--HhcCCCeEEecccchH---hh
Q 042970 283 VYVCLGSICNLTSSQLIELGLGLE---ASKKPFIWVTRVGNKLEELEKWLVEENFEE--RIKGRGLLIRGWVPQV---MI 354 (489)
Q Consensus 283 Vyvs~GS~~~~~~~~~~~~~~al~---~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~v~~~~pq~---~l 354 (489)
+++..|.+.. .+.+..+++|+. +.+.++++...+..... ..+.. ...+.++.+....++. .+
T Consensus 329 ~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 329 LIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKKFE--------KLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp EEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHHHH--------HHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred EEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCchHH--------HHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 3355566553 334455555554 45666666544332111 11111 1125678777777653 36
Q ss_pred hcCCCcccccccc---Ch-hhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHH
Q 042970 355 LSHPAVGGFLTHC---GW-NSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDD 430 (489)
Q Consensus 355 l~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~ 430 (489)
++.+++ ||.-. |+ .+++||+++|+|+|+-.. ....-.| +.-.-|..........+ .-...+.+.
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~g~-----l~~~~d~~~ 466 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVDCK-----VVEPSDVKK 466 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSCTT-----CCCHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCcee-----EECCCCHHH
Confidence 778888 77532 33 378999999999998643 3344444 34444543321100000 000346788
Q ss_pred HHHHHHHhcc
Q 042970 431 VETAINILMD 440 (489)
Q Consensus 431 l~~ai~~il~ 440 (489)
|.++|+++++
T Consensus 467 la~ai~ral~ 476 (536)
T 3vue_A 467 VAATLKRAIK 476 (536)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988775
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.60 E-value=0.00074 Score=68.56 Aligned_cols=149 Identities=15% Similarity=0.036 Sum_probs=93.8
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEE--ecCC-chhhhhhhhchhhHHH-HhcCCCeEEecccchHhh--
Q 042970 281 SVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVT--RVGN-KLEELEKWLVEENFEE-RIKGRGLLIRGWVPQVMI-- 354 (489)
Q Consensus 281 ~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~--~~~~-~~~~~~~~~l~~~~~~-~~~~~~~~v~~~~pq~~l-- 354 (489)
.++|.+|++.....++.+....+.+++.+..++|.. +... ..... -..+.. .+ .+.+.+.+.+|+.+.
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~-----~~~~~~~GI-~~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPY-----VERFIKSYL-GDSATAHPHSPYHQYLR 514 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHH-----HHHHHHHHH-GGGEEEECCCCHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHH-----HHHHHHcCC-CccEEEcCCCCHHHHHH
Confidence 589999998888889888888888888777777643 3221 11111 111111 12 357888888887654
Q ss_pred -hcCCCcccccc---ccChhhHHHHHHhCCcEeecCCcCcchh--h-HHHHHHHhcceeEecccCCcccccccccccccc
Q 042970 355 -LSHPAVGGFLT---HCGWNSSLEGISAGVQMLTWPLFGDQFC--N-EKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVK 427 (489)
Q Consensus 355 -l~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~--n-a~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~ 427 (489)
+..+|+ |+. .+|.+|++||+.+|||+|+.+- +++. . +..+ ...|+.-.+- .-+
T Consensus 515 ~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G--~~~asRvgaSlL-~~~GLpE~LI---------------A~d 574 (631)
T 3q3e_A 515 ILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTG--AEVHEHIDEGLF-KRLGLPEWLI---------------ANT 574 (631)
T ss_dssp HHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECC--SSHHHHHHHHHH-HHTTCCGGGE---------------ESS
T ss_pred HHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccC--CcHHHHhHHHHH-HhcCCCccee---------------cCC
Confidence 477887 543 3788999999999999999873 3221 1 1223 2445443211 135
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHHH
Q 042970 428 KDDVETAINILMDDGEERDVRRKRAKEF 455 (489)
Q Consensus 428 ~~~l~~ai~~il~~~~~~~~~~~~a~~l 455 (489)
.++..+...++.+|++....+|+++++-
T Consensus 575 ~eeYv~~Av~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 575 VDEYVERAVRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 6666666667888886666666555544
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.58 E-value=0.0017 Score=56.50 Aligned_cols=93 Identities=11% Similarity=0.081 Sum_probs=67.0
Q ss_pred CeEE-ecccch---HhhhcCCCcccccccc---C-hhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCC
Q 042970 342 GLLI-RGWVPQ---VMILSHPAVGGFLTHC---G-WNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVP 413 (489)
Q Consensus 342 ~~~v-~~~~pq---~~ll~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~ 413 (489)
++.+ .+++++ ..++..+++ +|... | -.++.||+++|+|+|+.... .+...+ ..+.|...+.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEecC---
Confidence 8999 999985 457888888 76433 3 45789999999999987532 222222 3456766643
Q ss_pred ccccccccccccccHHHHHHHHHHhcc-CChhHHHHHHHHHHHHH
Q 042970 414 LKFGEEEKIGVLVKKDDVETAINILMD-DGEERDVRRKRAKEFEE 457 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~ai~~il~-~~~~~~~~~~~a~~l~~ 457 (489)
-+.+.+.++|.++++ |++..+.+.+++++...
T Consensus 165 ------------~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 165 ------------GDPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp ------------TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 378999999999999 98766677777666543
No 52
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.35 E-value=0.0027 Score=67.00 Aligned_cols=149 Identities=16% Similarity=0.211 Sum_probs=97.9
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHH-HhcCCCeEEecccchHh---hh
Q 042970 280 SSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEE-RIKGRGLLIRGWVPQVM---IL 355 (489)
Q Consensus 280 ~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~v~~~~pq~~---ll 355 (489)
..+||.||.+....+++.+..-.+.|++.+.-++|........... +-.-+.. .+..+.+++.+..|..+ .+
T Consensus 522 ~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~----l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 522 DAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPN----IQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp TSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHH----HHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----HHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 4589999999888999999999999999888889888765432111 1111211 12356788888888655 44
Q ss_pred cCCCcccccc---ccChhhHHHHHHhCCcEeecCCcCcchh---hHHHHHHHhcceeEecccCCccccccccccccccHH
Q 042970 356 SHPAVGGFLT---HCGWNSSLEGISAGVQMLTWPLFGDQFC---NEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKD 429 (489)
Q Consensus 356 ~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~---na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~ 429 (489)
..+|+ ++- .+|.+|++|||.+|||+|.+| ++++. -+..+ ...|+.-.+-. -..+
T Consensus 598 ~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~--g~~~~sR~~~s~l-~~~gl~e~ia~---------------~~~~ 657 (723)
T 4gyw_A 598 QLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMP--GETLASRVAASQL-TCLGCLELIAK---------------NRQE 657 (723)
T ss_dssp GGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCC--CSSGGGTHHHHHH-HHHTCGGGBCS---------------SHHH
T ss_pred CCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEcc--CCCccHhHHHHHH-HHcCCcccccC---------------CHHH
Confidence 56666 654 789999999999999999998 44432 23344 46666644422 2345
Q ss_pred HHHHHHHHhccCChhHHHHHHHHH
Q 042970 430 DVETAINILMDDGEERDVRRKRAK 453 (489)
Q Consensus 430 ~l~~ai~~il~~~~~~~~~~~~a~ 453 (489)
-+..||+ +-.|++....+|++.+
T Consensus 658 Y~~~a~~-la~d~~~l~~lr~~l~ 680 (723)
T 4gyw_A 658 YEDIAVK-LGTDLEYLKKVRGKVW 680 (723)
T ss_dssp HHHHHHH-HHHCHHHHHHHHHHHH
T ss_pred HHHHHHH-HhcCHHHHHHHHHHHH
Confidence 5566664 5556654445554443
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.04 E-value=0.011 Score=56.53 Aligned_cols=103 Identities=12% Similarity=0.091 Sum_probs=65.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHHhhhCCCce-EEEEeeCCcccCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTPVNAARLKTVLARAVQSGLQI-RLVEIQFPWQEAGLPQGCEN 84 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 84 (489)
|||+++.....|++.=...+.+.|+++ +.+|++++.+.+.+.+.. .+.+ +++.++ ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~--------~p~i~~v~~~~-------~~~~--- 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR--------MPEVNEAIPMP-------LGHG--- 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT--------CTTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--------CCccCEEEEec-------CCcc---
Confidence 589999999999999999999999987 999999998855543322 1334 333322 0000
Q ss_pred CCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEE
Q 042970 85 FDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIV 144 (489)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~ 144 (489)
. .. + . ....+.+.+++ .++|++|.-.-..-...++...|+|...
T Consensus 63 ---~--~~----~-~----~~~~l~~~l~~--~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 63 ---A--LE----I-G----ERRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------C----H-H----HHHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---c--cc----h-H----HHHHHHHHHHh--cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 00 0 0 11234445555 7999999333334566778888999743
No 54
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.01 E-value=0.028 Score=53.65 Aligned_cols=106 Identities=14% Similarity=0.083 Sum_probs=70.6
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHHhhhCCCceE-EEEeeCCcccCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTPVNAARLKTVLARAVQSGLQIR-LVEIQFPWQEAGLPQG 81 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~ 81 (489)
...+|||++-....|++.=..++.+.|+++ +.+|++++.+.+.+.++.. +.+. ++.++ ...
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~--------~~~ 69 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVD--------KKG 69 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEEC--------CSS
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeC--------ccc
Confidence 357899999999999999999999999988 9999999988666655332 3453 44432 000
Q ss_pred CCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCC-cEEEECCCCcchHHHHHHcCCCcEE
Q 042970 82 CENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKP-CCIISDMGYPWTVDTAAKFNVPRIV 144 (489)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~-D~VI~D~~~~~~~~~A~~lgIP~v~ 144 (489)
. ...+. ... .+...+++ .++ |++|.=.-..-...++...|+|...
T Consensus 70 ----------~-~~~~~----~~~-~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 70 ----------R-HNSIS----GLN-EVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ----------H-HHHHH----HHH-HHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ----------c-cccHH----HHH-HHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 00111 111 22333444 589 9999655555566678888998754
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.74 E-value=0.0047 Score=58.73 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=79.5
Q ss_pred CeEEecccchHhhh---cCCCccccccccCh---------hhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEec
Q 042970 342 GLLIRGWVPQVMIL---SHPAVGGFLTHCGW---------NSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVG 409 (489)
Q Consensus 342 ~~~v~~~~pq~~ll---~~~~~~~~I~HgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~ 409 (489)
|+.+.+|+|+.++. ..++.+++.+-+.+ +-+.|++++|+|+|+.+ ...++..+ ++.|+|+..+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 99999999997754 45556555533333 34789999999999854 55678888 6999998873
Q ss_pred ccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 042970 410 VEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSSYNNIQLFFQD 479 (489)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~ 479 (489)
+.+++.+++..+. +++.+.|++|+++.+++++ .|....+++.+.+..
T Consensus 290 -----------------~~~e~~~~i~~l~--~~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -----------------DVEEAIMKVKNVN--EDEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQ 336 (339)
T ss_dssp -----------------SHHHHHHHHHHCC--HHHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHH
Confidence 3467888888764 4678899999999988765 345555555555444
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.15 E-value=0.037 Score=54.17 Aligned_cols=80 Identities=16% Similarity=0.091 Sum_probs=57.1
Q ss_pred CCCeEEecccchHh---hhcCCCcccccccc---Ch-hhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccC
Q 042970 340 GRGLLIRGWVPQVM---ILSHPAVGGFLTHC---GW-NSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEV 412 (489)
Q Consensus 340 ~~~~~v~~~~pq~~---ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~ 412 (489)
..++.+.+++|+.+ ++..+++ ||.-+ |. ++++||+++|+|+|+- ..+ ....+ +.-..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v-~~~~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLS-NWHSNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGG-GTBTTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhh-hcCCCEEEeCC--
Confidence 35788999998754 6788888 76432 43 4679999999999983 222 12234 34446776753
Q ss_pred CccccccccccccccHHHHHHHHHHhccCC
Q 042970 413 PLKFGEEEKIGVLVKKDDVETAINILMDDG 442 (489)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~l~~ai~~il~~~ 442 (489)
-+++.|+++|.++++|+
T Consensus 364 -------------~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 364 -------------LNPENIAETLVELCMSF 380 (413)
T ss_dssp -------------CSHHHHHHHHHHHHHHT
T ss_pred -------------CCHHHHHHHHHHHHcCH
Confidence 48899999999999887
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.44 E-value=0.91 Score=42.42 Aligned_cols=44 Identities=9% Similarity=0.011 Sum_probs=38.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHH
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTPVNAARLK 51 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~~~~ 51 (489)
+||+++-....|++.=..++.++|+++ +.+|++++.+.+.+.+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 589999999999999999999999988 99999999886665543
No 58
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=87.65 E-value=0.88 Score=40.73 Aligned_cols=113 Identities=16% Similarity=0.168 Sum_probs=60.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFDM 87 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (489)
+|||+.-=-+. +---+..|+++|.+.| +|+++++..+..-.-.. .+....+++..+... .......
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~s----iT~~~pl~~~~~~~~--------~~~~v~G 67 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHS----LTFTEPLKMRKIDTD--------FYTVIDG 67 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCS----CCCSSCEEEEEEETT--------EEEETTC
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccC----cCCCCCceeEEeecc--------ceeecCC
Confidence 56666654433 3345778999999999 58888887554322111 111112444443211 0000111
Q ss_pred CCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECC----------CC---cchHHHHHHcCCCcEEEec
Q 042970 88 LPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDM----------GY---PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~----------~~---~~~~~~A~~lgIP~v~l~~ 147 (489)
.+. .. ..-.+..++.+ .+||+||+.. ++ .+|+.-|..+|||.|.+|.
T Consensus 68 TPa----DC-------V~lal~~~l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 68 TPA----DC-------VHLGYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CHH----HH-------HHHHHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ChH----HH-------HhhhhhhhcCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 111 01 11133344555 6999999832 22 2566678889999999874
No 59
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=87.26 E-value=1.7 Score=34.82 Aligned_cols=49 Identities=10% Similarity=-0.053 Sum_probs=39.7
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTV 53 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~ 53 (489)
|++.+|++.+.+.-+|-....-++..|..+|++|+........+.+.+.
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~ 49 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKA 49 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 3568999999999999999999999999999999988654444444333
No 60
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=86.15 E-value=5.3 Score=39.57 Aligned_cols=109 Identities=18% Similarity=0.188 Sum_probs=67.8
Q ss_pred eE-EecccchHh---hhcCCCcccccc---ccChh-hHHHHHHhCC-----cEeecCCcCcchhhHHHHHHHhcceeEec
Q 042970 343 LL-IRGWVPQVM---ILSHPAVGGFLT---HCGWN-SSLEGISAGV-----QMLTWPLFGDQFCNEKLIVEVLRIGVSVG 409 (489)
Q Consensus 343 ~~-v~~~~pq~~---ll~~~~~~~~I~---HgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~e~~g~G~~l~ 409 (489)
++ +.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--..+ .+. ...-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~----~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN----ELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG----TCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH----HhCCeEEEC
Confidence 44 467888754 6678888 764 44666 6779999998 666543322 111 112366665
Q ss_pred ccCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHcC
Q 042970 410 VEVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSSYNNIQLFFQDIMQQ 483 (489)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 483 (489)
. -+.+.++++|.++|+++++ ..+++.++.++.+ ++ -+..+-++++++.+.+.
T Consensus 403 p---------------~d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v----~~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P---------------YDRDEVAAALDRALTMSLA--ERISRHAEMLDVI----VK-NDINHWQECFISDLKQI 454 (482)
T ss_dssp T---------------TCHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHH----HH-TCHHHHHHHHHHHHHHS
T ss_pred C---------------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHH----Hh-CCHHHHHHHHHHHHHhc
Confidence 4 4789999999999986521 1222222222222 22 35678888899888776
No 61
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=85.23 E-value=12 Score=32.46 Aligned_cols=105 Identities=10% Similarity=-0.016 Sum_probs=58.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCC--eEEEEe-CCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRA--IVTIVT-TPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCEN 84 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH--~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (489)
+||+|+.++... -+.++.++|.+.+| +|..+. .+.... ........ ++.+..++ +....
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~-~~~~A~~~-----gIp~~~~~--------~~~~~- 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAY-AIERCKKH-----NVECKVIQ--------RKEFP- 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCH-HHHHHHHH-----TCCEEECC--------GGGSS-
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChH-HHHHHHHc-----CCCEEEeC--------ccccc-
Confidence 589988777643 36677788888888 776554 333322 22222222 56666543 11100
Q ss_pred CCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 85 FDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
. .....+++.+.+++ .++|+||+-.+. .-...+-+...-.++-+++
T Consensus 64 -----~----------r~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 64 -----S----------KKEFEERMALELKK--KGVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp -----S----------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred -----c----------hhhhhHHHHHHHHh--cCCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 0 01123456677777 899999976653 3445555555556666544
No 62
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=84.81 E-value=10 Score=35.13 Aligned_cols=38 Identities=11% Similarity=-0.021 Sum_probs=25.6
Q ss_pred CCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 042970 3 SEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPV 45 (489)
Q Consensus 3 ~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~ 45 (489)
+||+++||+|+-.|.. .+..-++|.++||+|..+.+..
T Consensus 3 ~m~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 3 AMSQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp ----CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECCC
T ss_pred ccccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcCC
Confidence 3577899999988742 3455678888999998776643
No 63
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=84.60 E-value=14 Score=32.37 Aligned_cols=107 Identities=9% Similarity=-0.034 Sum_probs=61.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC-cchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTP-VNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGC 82 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 82 (489)
+++||+|+.++... -+.++.++|.+. +++|..+.+. .... ....... .++.+..++ +...
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~-~~~~A~~-----~gIp~~~~~--------~~~~ 83 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAY-GLERARR-----AGVDALHMD--------PAAY 83 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCH-HHHHHHH-----TTCEEEECC--------GGGS
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchH-HHHHHHH-----cCCCEEEEC--------cccc
Confidence 45799999887742 366777788776 6888666443 3322 2222221 267776543 1110
Q ss_pred CCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 83 ENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
. . . ..+.+++.+.+++ .+||+||+-.+. .-...+-..+.-.++-+++
T Consensus 84 ~------~-r---------~~~~~~~~~~l~~--~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 84 P------S-R---------TAFDAALAERLQA--YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp S------S-H---------HHHHHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred c------c-h---------hhccHHHHHHHHh--cCCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 0 0 0 1123456677777 899999976653 3455555666556666543
No 64
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=83.92 E-value=0.57 Score=45.64 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=32.1
Q ss_pred CCCcEEEEecCCCc-----cCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 042970 5 ASEFHILLLPFLAQ-----GHLIPMFDMARLLANHRAIVTIVTTPV 45 (489)
Q Consensus 5 ~~~~~vl~~~~p~~-----GHv~P~l~La~~L~~rGH~V~~~~~~~ 45 (489)
..+|||++++.... |=.+....||++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 35789999985422 334568999999999999999998753
No 65
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=83.55 E-value=1.5 Score=37.90 Aligned_cols=47 Identities=15% Similarity=0.060 Sum_probs=37.9
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKT 52 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (489)
.+++||++.-.|+.|-+. ...|.+.|+++|++|.++.++.....+..
T Consensus 2 ~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 2 SGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 345789999999977777 89999999999999999988755544433
No 66
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=82.40 E-value=2.2 Score=37.88 Aligned_cols=113 Identities=17% Similarity=0.189 Sum_probs=62.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFDM 87 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (489)
||||+.-=-+. |---+..|+++|++.| +|+++++.....-.... .+....+++..+.. +.. .....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s----it~~~pl~~~~~~~-----~~~---~~v~G 67 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHS----LTFTEPLKMRKIDT-----DFY---TVIDG 67 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCS----CCCSSCEEEEEEET-----TEE---EETTC
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccc----eecCCCeEEEEecC-----CCe---EEECC
Confidence 67877765543 4556889999999988 99999987554422111 11111344444331 100 00111
Q ss_pred CCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECC----------CCc---chHHHHHHcCCCcEEEec
Q 042970 88 LPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDM----------GYP---WTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~----------~~~---~~~~~A~~lgIP~v~l~~ 147 (489)
.+ .... .-.+..++.. .+||+||+.. ++. +|+.-|..+|||.|.+|.
T Consensus 68 TP----aDCV-------~lal~~l~~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 68 TP----ADCV-------HLGYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CH----HHHH-------HHHHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CH----HHHH-------HHHHHHhcCC--CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 11 1111 1123334443 5899999753 221 455668888999999875
No 67
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=82.24 E-value=9.1 Score=33.18 Aligned_cols=106 Identities=11% Similarity=0.056 Sum_probs=58.1
Q ss_pred CCCCCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC-cchhhHHHHHHHhhhCCCceEEEEeeCCcccCCC
Q 042970 2 ASEASEFHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTP-VNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGL 78 (489)
Q Consensus 2 ~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 78 (489)
+|+.+++||+++.++..+. +.+|.+++.+. +++|..+.+. ......+.+ .. .++.++.++
T Consensus 3 ~~~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A-~~-----~gIp~~~~~-------- 65 (215)
T 3kcq_A 3 GSMKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIA-QS-----YGIPTFVVK-------- 65 (215)
T ss_dssp ----CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHH-HH-----TTCCEEECC--------
T ss_pred CCCCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHH-HH-----cCCCEEEeC--------
Confidence 3566678999988877443 44555566544 3788766543 222222111 11 267766543
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 79 PQGCENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
+... . .+++.+.+++ .++|+||+-.+. .-...+-+.+.-.++-+++
T Consensus 66 ~~~~---------~------------~~~~~~~L~~--~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHp 112 (215)
T 3kcq_A 66 RKPL---------D------------IEHISTVLRE--HDVDLVCLAGFMSILPEKFVTDWHHKIINIHP 112 (215)
T ss_dssp BTTB---------C------------HHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred cccC---------C------------hHHHHHHHHH--hCCCEEEEeCCceEeCHHHHhhccCCeEEECc
Confidence 1110 0 1466777788 899999977654 3455555556556666544
No 68
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=82.22 E-value=30 Score=34.17 Aligned_cols=109 Identities=17% Similarity=0.089 Sum_probs=70.0
Q ss_pred CeEEecccchH---hhhcCCCcccccc---ccChhhH-HHHHHhC---CcEeecCCcCcchhhHHHHHHHhc-ceeEecc
Q 042970 342 GLLIRGWVPQV---MILSHPAVGGFLT---HCGWNSS-LEGISAG---VQMLTWPLFGDQFCNEKLIVEVLR-IGVSVGV 410 (489)
Q Consensus 342 ~~~v~~~~pq~---~ll~~~~~~~~I~---HgG~~s~-~eal~~G---vP~l~~P~~~DQ~~na~~v~e~~g-~G~~l~~ 410 (489)
.|++...+|+. .++..+++ |+. .-|+|.+ .|++++| .|+|+--+.+ .+ +.+| -|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~----~~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA----EVLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH----HHHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH----HHhCCCEEEECC
Confidence 57777778774 45667887 654 4688865 7999996 5655443222 22 2333 4777764
Q ss_pred cCCccccccccccccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHc
Q 042970 411 EVPLKFGEEEKIGVLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSSYNNIQLFFQDIMQ 482 (489)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~ 482 (489)
.+.+.++++|.++|+++++ .-+++.+++.+.++ .-+...-++.|+++|..
T Consensus 423 ---------------~D~~~lA~AI~~aL~m~~~--er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 ---------------FDLVEQAEAISAALAAGPR--QRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp ---------------TBHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred ---------------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 4889999999999987632 23334444444433 34567778888888864
No 69
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=81.31 E-value=3.4 Score=34.07 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=39.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTV 53 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~ 53 (489)
.+.+|++.+.+.-.|-....-++..|..+|++|++.......+.+.+.
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~a 64 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMA 64 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 478999999999999999999999999999999988654333433333
No 70
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=80.60 E-value=2.3 Score=43.75 Aligned_cols=95 Identities=9% Similarity=0.111 Sum_probs=54.2
Q ss_pred Eecccch---------HhhhcCCCcccccccc---Ch-hhHHHHHHhCCcEeecCCcCcchhhHHHHHH------Hhcce
Q 042970 345 IRGWVPQ---------VMILSHPAVGGFLTHC---GW-NSSLEGISAGVQMLTWPLFGDQFCNEKLIVE------VLRIG 405 (489)
Q Consensus 345 v~~~~pq---------~~ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e------~~g~G 405 (489)
+-.|++. .+++..+++ ||.-+ |+ .+.+||+++|+|+|+.-..+ ....|.+ .-+.|
T Consensus 497 ~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~tG 570 (725)
T 3nb0_A 497 HPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKDYG 570 (725)
T ss_dssp CCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHHTT
T ss_pred eccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCCce
Confidence 4467765 457888888 77543 44 47889999999999964432 2222311 11357
Q ss_pred eEecccCCcccccccccccccc----HHHHHHHHHHhcc-CChhHHHHHHHHHHHHH
Q 042970 406 VSVGVEVPLKFGEEEKIGVLVK----KDDVETAINILMD-DGEERDVRRKRAKEFEE 457 (489)
Q Consensus 406 ~~l~~~~~~~~~~~~~~~~~~~----~~~l~~ai~~il~-~~~~~~~~~~~a~~l~~ 457 (489)
+.+.... ..+ .+.|.+++..++. |++..+.++++++++++
T Consensus 571 ~lV~~rd------------~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~ 615 (725)
T 3nb0_A 571 IYIVDRR------------FKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD 615 (725)
T ss_dssp EEEECCS------------SSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG
T ss_pred EEEeCCC------------CCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6553220 233 3455555555543 34444566666655543
No 71
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=79.96 E-value=2.4 Score=33.92 Aligned_cols=50 Identities=16% Similarity=0.135 Sum_probs=31.6
Q ss_pred CCCCCCCcEEEE-ecCC-CccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHH
Q 042970 1 MASEASEFHILL-LPFL-AQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLK 51 (489)
Q Consensus 1 m~~~~~~~~vl~-~~~p-~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~ 51 (489)
|.++. .||+|+ +-.| ..-.+.-.+=|+..|.++||+|++++++.....++
T Consensus 1 ~~~~~-~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 1 MKTES-TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp ------CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred Ccccc-ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 44444 344444 4456 45555666789999999999999999985554443
No 72
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=79.04 E-value=5.1 Score=38.48 Aligned_cols=90 Identities=10% Similarity=-0.023 Sum_probs=55.3
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc-chhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCC
Q 042970 4 EASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPV-NAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGC 82 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 82 (489)
||+.+||+++..+.. .+.+++++++.|++|+++..+. +.....-. . +++.++ ..
T Consensus 4 m~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~a---------d-~~~~~~-------~~--- 58 (403)
T 4dim_A 4 MYDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPNAHKPCLNLA---------D-EISYMD-------IS--- 58 (403)
T ss_dssp --CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSSCCHHHHHHC---------S-EEEECC-------TT---
T ss_pred ccCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCCCCCcchhhC---------C-eEEEec-------CC---
Confidence 467789999987753 3679999999999999996543 33322110 1 223221 00
Q ss_pred CCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECC---CCcchHHHHHHcCCC
Q 042970 83 ENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDM---GYPWTVDTAAKFNVP 141 (489)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~---~~~~~~~~A~~lgIP 141 (489)
..+.+.+++++ .++|+|+... .......+++++|+|
T Consensus 59 ---------------------d~~~l~~~~~~--~~~d~v~~~~~~~~~~~~a~~~~~~gl~ 97 (403)
T 4dim_A 59 ---------------------NPDEVEQKVKD--LNLDGAATCCLDTGIVSLARICDKENLV 97 (403)
T ss_dssp ---------------------CHHHHHHHTTT--SCCSEEECCSCSTTHHHHHHHHHHHTCS
T ss_pred ---------------------CHHHHHHHHHH--cCCCEEEeCCcchhHHHHHHHHHHcCcC
Confidence 12456666777 7999999632 222455677889986
No 73
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=78.85 E-value=15 Score=34.09 Aligned_cols=107 Identities=8% Similarity=-0.050 Sum_probs=58.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc----hhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVN----AARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQ 80 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (489)
|.++||+|+. --+-...+.++|.++||+|..+.+.++ ...+....... ++.+.... .+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~-----gIpv~~~~------~~-- 81 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD-----GVPVFKYS------RW-- 81 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH-----TCCEEECS------CC--
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc-----CCCEEecC------cc--
Confidence 4569999993 223344567889999999976654221 11222222221 56655432 00
Q ss_pred CCCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecch
Q 042970 81 GCENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHGFS 149 (489)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~~~ 149 (489)
... ....+++.+.+++ .++|++|+-.+. .-...+-......++-++++.
T Consensus 82 --~~~----------------~~~~~~~~~~l~~--~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 82 --RAK----------------GQALPDVVAKYQA--LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp --EET----------------TEECHHHHHHHHT--TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred --ccc----------------ccccHHHHHHHHh--cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 000 0122345566777 899999976654 344455555555677765544
No 74
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=78.13 E-value=6.1 Score=34.09 Aligned_cols=50 Identities=16% Similarity=0.034 Sum_probs=41.3
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHH
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLA 55 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~ 55 (489)
.+.+|++.+.++-.|-....-++..|..+|++|.++....-.+.+.....
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~ 136 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVK 136 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 35689999999999999999999999999999999876555555544443
No 75
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=78.09 E-value=1.2 Score=38.06 Aligned_cols=50 Identities=8% Similarity=-0.030 Sum_probs=38.8
Q ss_pred CCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH
Q 042970 2 ASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKT 52 (489)
Q Consensus 2 ~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (489)
-++.++.||++...|+.|=+. ...|.+.|+++|++|.++.++.....+..
T Consensus 3 ~~~l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 3 ISILKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp CTTGGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred ccccCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 344567899999999877665 78999999999999999987755544433
No 76
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=76.98 E-value=20 Score=31.83 Aligned_cols=123 Identities=12% Similarity=0.036 Sum_probs=68.0
Q ss_pred CCcEEEEecC--CCccCHHHHHHHHHHHHhCCCeEEEEeC---C---c--chhhHHHHHHHhhhCCCceEEEEeeCCccc
Q 042970 6 SEFHILLLPF--LAQGHLIPMFDMARLLANHRAIVTIVTT---P---V--NAARLKTVLARAVQSGLQIRLVEIQFPWQE 75 (489)
Q Consensus 6 ~~~~vl~~~~--p~~GHv~P~l~La~~L~~rGH~V~~~~~---~---~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 75 (489)
++++.+|++. ...|=..-.+.|++.|+++|++|.++=+ . . +...++.. .+..-....+.
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~------~g~~~~~~~~~----- 92 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRL------AGVTQLAGLAR----- 92 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHH------HCCCEEEEEEE-----
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHH------cCCCCCCCCee-----
Confidence 3455555553 3788999999999999999999998831 1 1 11122221 11111111111
Q ss_pred CCCCCCCCCCCCCCchhhHHHHHHHH-hhchHHHHHHHhhcCCCCcEEEECCCC----------cchHHHHHHcCCCcEE
Q 042970 76 AGLPQGCENFDMLPSIDLASKFFNSH-SMLQLPFENLFSEQSPKPCCIISDMGY----------PWTVDTAAKFNVPRIV 144 (489)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~~~~D~VI~D~~~----------~~~~~~A~~lgIP~v~ 144 (489)
+.... ....... .... ....+.+.+.+++...+.|+||.|... .....+|+.++.|++.
T Consensus 93 --~~~p~-------sP~~aa~-~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVIL 162 (251)
T 3fgn_A 93 --YPQPM-------APAAAAE-HAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALV 162 (251)
T ss_dssp --CSSSS-------CHHHHHH-HTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEE
T ss_pred --ECCCC-------ChHHHHH-HcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEE
Confidence 11100 0011110 1111 113355666666655799999988731 2456799999999999
Q ss_pred Eecch
Q 042970 145 FHGFS 149 (489)
Q Consensus 145 l~~~~ 149 (489)
+....
T Consensus 163 V~~~~ 167 (251)
T 3fgn_A 163 VVTAD 167 (251)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 76554
No 77
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=76.91 E-value=23 Score=30.08 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=33.4
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+-.|++++.++.|-..-.+.+|.+...+|+.|.|+..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF 64 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQF 64 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 4578899999999999999999999999999999943
No 78
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=76.60 E-value=3.1 Score=35.96 Aligned_cols=44 Identities=14% Similarity=0.062 Sum_probs=35.4
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhH
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARL 50 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~ 50 (489)
.+++||++...++.+-+. ...|.+.|+++| +|.++.++.....+
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 456899999999988776 899999999999 99999888555433
No 79
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=76.55 E-value=29 Score=29.84 Aligned_cols=105 Identities=9% Similarity=-0.018 Sum_probs=59.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC-cchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTP-VNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCEN 84 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (489)
+||+++.++..+ -+.++.++|.+. +|+|..+.+. .... +...... .++.+..++ +....
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~-v~~~A~~-----~gIp~~~~~--------~~~~~- 65 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAK-VIERAAR-----ENVPAFVFS--------PKDYP- 65 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCH-HHHHHHH-----TTCCEEECC--------GGGSS-
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcH-HHHHHHH-----cCCCEEEeC--------ccccc-
Confidence 578888777643 356667788777 7899766544 3332 2222221 256666543 11100
Q ss_pred CCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 85 FDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
. -..+.+.+.+.+++ .+||+||+-.+. .-...+-+.+.-.++-+++
T Consensus 66 -----~----------~~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 66 -----S----------KAAFESEILRELKG--RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp -----S----------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred -----c----------hhhhHHHHHHHHHh--cCCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 0 01123456677777 899999976654 3455555656556666543
No 80
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=74.44 E-value=8.1 Score=34.61 Aligned_cols=48 Identities=15% Similarity=-0.032 Sum_probs=39.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTV 53 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~ 53 (489)
.+.+|++.+.++-.|-....-++..|..+|++|+++....-.+.+...
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~ 169 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAA 169 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHH
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 467999999999999999999999999999999988654333334333
No 81
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=72.77 E-value=38 Score=29.12 Aligned_cols=106 Identities=8% Similarity=-0.020 Sum_probs=59.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENF 85 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (489)
+||+++.++..+ -+-+|.+.+.+. +|+|..+.+............. .++.+..++ +....
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~-----~gIp~~~~~--------~~~~~-- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQ-----AGIATHTLI--------ASAFD-- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHH-----TTCEEEECC--------GGGCS--
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHH-----cCCcEEEeC--------ccccc--
Confidence 478888877643 366677777665 6898766544322222222222 267776643 11100
Q ss_pred CCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 86 DMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
. ...+.+++.+.+++ .++|+||+-.+. .-...+-+.+.-.++-+++
T Consensus 63 ----~----------r~~~~~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 63 ----S----------REAYDRELIHEIDM--YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp ----S----------HHHHHHHHHHHHGG--GCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred ----c----------hhhccHHHHHHHHh--cCCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 0 01123456677888 899999977654 3455555556566666543
No 82
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=72.51 E-value=27 Score=32.19 Aligned_cols=101 Identities=12% Similarity=0.008 Sum_probs=56.8
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh----------hHHHHHHHhhhCCCceEEEEeeCCccc
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAA----------RLKTVLARAVQSGLQIRLVEIQFPWQE 75 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~~~~~~ 75 (489)
++|||+|+..|..+ ....++|.+.||+|..+.+..... .+....... ++.++.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~-----gIpv~~------- 64 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK-----GLPVFQ------- 64 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHT-----TCCEEC-------
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHc-----CCcEEe-------
Confidence 46899999886432 445577777899998665543221 122221111 344321
Q ss_pred CCCCCCCCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecch
Q 042970 76 AGLPQGCENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHGFS 149 (489)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~~~ 149 (489)
+... . .+++.+.+++ .++|+||+=.+. .-...+-......++-++++.
T Consensus 65 ---~~~~------~---------------~~~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 65 ---PVSL------R---------------PQENQQLVAE--LQADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp ---CSCS------C---------------SHHHHHHHHH--TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred ---cCCC------C---------------CHHHHHHHHh--cCCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 1110 0 1345566777 899999976553 345555565666677766544
No 83
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=70.59 E-value=5 Score=34.27 Aligned_cols=45 Identities=9% Similarity=0.061 Sum_probs=36.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhHHHH
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANH-RAIVTIVTTPVNAARLKTV 53 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~r-GH~V~~~~~~~~~~~~~~~ 53 (489)
+||++...|+.|-+. ...|.+.|+++ |++|.++.++.....+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 478888888876665 99999999999 9999999887655555433
No 84
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=70.32 E-value=5 Score=34.43 Aligned_cols=41 Identities=15% Similarity=-0.092 Sum_probs=34.0
Q ss_pred CCCcEEEEecCCCccCHH-HHHHHHHHHHhCCCeEEEEeCCcc
Q 042970 5 ASEFHILLLPFLAQGHLI-PMFDMARLLANHRAIVTIVTTPVN 46 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~-P~l~La~~L~~rGH~V~~~~~~~~ 46 (489)
.+.+||++.-.|+ +... =.+.|.+.|+++|++|.++.++..
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 4567999998888 5555 789999999999999999987733
No 85
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=69.58 E-value=5.4 Score=33.32 Aligned_cols=44 Identities=7% Similarity=-0.001 Sum_probs=35.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKT 52 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (489)
+||++...|+.|=+. ...|.+.|+++|++|.++.++.....+..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 689888888866654 89999999999999999988866654443
No 86
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=67.91 E-value=12 Score=32.47 Aligned_cols=48 Identities=8% Similarity=-0.105 Sum_probs=39.8
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTV 53 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~ 53 (489)
++.+|++.+.++-.|-....-++..|..+|++|+......-.+.+.+.
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~ 138 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEE 138 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHH
Confidence 468999999999999999999999999999999998765444444333
No 87
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=67.85 E-value=51 Score=30.38 Aligned_cols=36 Identities=14% Similarity=0.035 Sum_probs=26.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPV 45 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~ 45 (489)
.++|||+|+-.|..+ +..-++|.++||+|..+.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 457899999888644 344577888899998776643
No 88
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=66.91 E-value=6.1 Score=34.03 Aligned_cols=42 Identities=12% Similarity=-0.168 Sum_probs=32.8
Q ss_pred CCCcEEEEecCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCcch
Q 042970 5 ASEFHILLLPFLAQGHLIP-MFDMARLLANHRAIVTIVTTPVNA 47 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P-~l~La~~L~~rGH~V~~~~~~~~~ 47 (489)
.+.+||++.-.|+ +...- .+.|.+.|+++|++|.++.++...
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4567899988887 55665 899999999999999999887443
No 89
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=66.23 E-value=43 Score=28.88 Aligned_cols=107 Identities=14% Similarity=0.097 Sum_probs=58.9
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHh-CCCeEEEEeC-CcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLAN-HRAIVTIVTT-PVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCE 83 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~-rGH~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (489)
+++||+++.++..+.+..+ .++..+ .+++|..+.+ .....-.+.+ +. .++.++.++. ...
T Consensus 4 ~~~riavl~SG~Gsnl~al---l~~~~~~~~~eI~~Vis~~~~a~~~~~A-~~-----~gIp~~~~~~--------~~~- 65 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAI---IGAIQKGLAIEIRAVISNRADAYGLKRA-QQ-----ADIPTHIIPH--------EEF- 65 (215)
T ss_dssp CCEEEEEEESSCCHHHHHH---HHHHHTTCSEEEEEEEESCTTCHHHHHH-HH-----TTCCEEECCG--------GGS-
T ss_pred CCcEEEEEEeCCcHHHHHH---HHHHHcCCCCEEEEEEeCCcchHHHHHH-HH-----cCCCEEEeCc--------ccc-
Confidence 3678998888775544444 444443 3688887654 3222212111 11 2677766531 110
Q ss_pred CCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 84 NFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
+. . ....+++.+.+++ .++|+||+-.+. .-...+-+...-.++-+++
T Consensus 66 -----~~-r---------~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 66 -----PS-R---------TDFESTLQKTIDH--YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp -----SS-H---------HHHHHHHHHHHHT--TCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred -----Cc-h---------hHhHHHHHHHHHh--cCCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 00 0 0123467778888 899999976654 3455555556556666554
No 90
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=66.00 E-value=9.3 Score=32.35 Aligned_cols=44 Identities=20% Similarity=0.111 Sum_probs=35.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHH
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKT 52 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (489)
+||++...|+.|-+ =...|.++|+++|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 58999999988855 579999999999999999988755554443
No 91
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=65.91 E-value=7.3 Score=31.35 Aligned_cols=50 Identities=16% Similarity=0.018 Sum_probs=33.5
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhH
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARL 50 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~ 50 (489)
|..+|.+.-++++..+..-.+.+.+.+|...++.|++|+++.+-.....+
T Consensus 2 ~~~~m~~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l 51 (144)
T 2qs7_A 2 MAEEKKKKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAI 51 (144)
T ss_dssp -----CCEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHT
T ss_pred ccccccCCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHH
Confidence 44444444445555566788999999999999999999988776444433
No 92
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=65.49 E-value=29 Score=30.55 Aligned_cols=20 Identities=10% Similarity=0.097 Sum_probs=15.7
Q ss_pred chHHHHHHHhhcCCCCcEEEEC
Q 042970 104 LQLPFENLFSEQSPKPCCIISD 125 (489)
Q Consensus 104 ~~~~l~~ll~~~~~~~D~VI~D 125 (489)
....+.+++++ .+||+|++-
T Consensus 85 ~~~~l~~~ir~--~~PdvV~t~ 104 (242)
T 2ixd_A 85 YIREIVKVIRT--YKPKLVFAP 104 (242)
T ss_dssp HHHHHHHHHHH--HCCSEEEEE
T ss_pred HHHHHHHHHHH--cCCCEEEEC
Confidence 45677788888 899999964
No 93
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=65.30 E-value=35 Score=29.31 Aligned_cols=108 Identities=12% Similarity=-0.001 Sum_probs=58.5
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC-cchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTP-VNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQG 81 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (489)
|+++||+++.++..+. +.+|.+++.+. .++|..+.+. ....-.+.+ +. .|+.+..++. ..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A-~~-----~gIp~~~~~~--------~~ 67 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKA-EA-----AGIATQVFKR--------KD 67 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHH-HH-----TTCCEEECCG--------GG
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHH-HH-----cCCCEEEeCc--------cc
Confidence 5678999988887444 44555666554 3688766542 222222111 11 2677666431 11
Q ss_pred CCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 82 CENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
. .. -....+++.+.+++ .++|+||+-.+. .-...+-+.+.-.++-+++
T Consensus 68 ~------~~----------r~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 68 F------AS----------KEAHEDAILAALDV--LKPDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp S------SS----------HHHHHHHHHHHHHH--HCCSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred c------CC----------HHHHHHHHHHHHHh--cCCCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 0 00 01123466677777 799999977654 3445555555555665543
No 94
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=65.26 E-value=47 Score=32.70 Aligned_cols=36 Identities=19% Similarity=0.058 Sum_probs=28.4
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 042970 105 QLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVF 145 (489)
Q Consensus 105 ~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l 145 (489)
..++.+++++ .+||++|... ....+|+++|||++.+
T Consensus 390 ~~el~~~i~~--~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ARVLLKTVDE--YQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHH--TTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHh--cCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 3466777777 8999999864 4667899999999864
No 95
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=65.00 E-value=9.1 Score=30.28 Aligned_cols=32 Identities=9% Similarity=-0.034 Sum_probs=25.2
Q ss_pred CccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 042970 17 AQGHLIPMFDMARLLANHRAIVTIVTTPVNAA 48 (489)
Q Consensus 17 ~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~ 48 (489)
.......-+.+|...++.||+|+++-......
T Consensus 28 ~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp GTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 46677888999999999999998776654433
No 96
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=64.87 E-value=33 Score=28.74 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=29.5
Q ss_pred EEEEec--CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 9 HILLLP--FLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 9 ~vl~~~--~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+++.+. -|+.|=..=...||..|+++|+.|.++-..
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 455444 458899999999999999999999999544
No 97
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=63.67 E-value=5.1 Score=32.40 Aligned_cols=35 Identities=14% Similarity=0.157 Sum_probs=27.0
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|.+.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 45678888854 4444 68899999999999999753
No 98
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=63.02 E-value=16 Score=35.80 Aligned_cols=109 Identities=11% Similarity=0.074 Sum_probs=58.5
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFD 86 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (489)
++|-+|++. .+=.-++.+|+.|.+.|.++. ++......+++. |+....+..- -++|+.....-
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~v---TgfPEil~GRV 71 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQL---TGFPEVLDGRV 71 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHHH---HSCCCCTTTTS
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeecccc---CCCchhhCCcc
Confidence 455566666 456678999999999998875 455555555554 6665554211 25566544321
Q ss_pred CCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHH
Q 042970 87 MLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDT 134 (489)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~ 134 (489)
..-.......+. +.+.....+.++-+.--..+|+||++ ++++-..+
T Consensus 72 KTLHP~ihgGiL-a~r~~~~h~~~l~~~~i~~iDlVvvN-LYPF~~tv 117 (523)
T 3zzm_A 72 KTLHPRVHAGLL-ADLRKSEHAAALEQLGIEAFELVVVN-LYPFSQTV 117 (523)
T ss_dssp SSCSHHHHHHHH-CCTTSHHHHHHHHHHTCCCCSEEEEE-CCCHHHHH
T ss_pred ccCCchhhhhhc-cCCCCHHHHHHHHHCCCCceeEEEEe-CCChHHHH
Confidence 111112222111 11223333333333223588999999 55554444
No 99
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=62.06 E-value=33 Score=29.57 Aligned_cols=108 Identities=11% Similarity=0.088 Sum_probs=57.1
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLAN-HRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCE 83 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~-rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (489)
+.++||+++.++..+.+..++ +++.+ -+++|..+.+.......+.+ +. .++.++.++. . ..
T Consensus 10 ~~~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~~a~~~~~A-~~-----~gIp~~~~~~-------~-~~- 71 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDRECRAAEIA-AE-----ASVPVFTVRL-------A-DH- 71 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESSCCHHHHHH-HH-----TTCCEEECCG-------G-GS-
T ss_pred CCCcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCCchHHHHHH-HH-----cCCCEEEeCc-------c-cc-
Confidence 457899999888755444444 44433 24688766554433222222 21 2677665421 0 00
Q ss_pred CCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 84 NFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
.. . ....+++.+.+++ .++|+||+-.+. .-...+-+.+.-.++-+++
T Consensus 72 -----~~-r---------~~~d~~~~~~l~~--~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHp 119 (215)
T 3da8_A 72 -----PS-R---------DAWDVAITAATAA--HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHP 119 (215)
T ss_dssp -----SS-H---------HHHHHHHHHHHHT--TCCSEEEEEECCSCCCHHHHHHHTTTEEEEES
T ss_pred -----cc-h---------hhhhHHHHHHHHh--hCCCEEEEcCchhhCCHHHHhhccCCeEEeCc
Confidence 00 0 1124467777888 899999865543 3444444545445555443
No 100
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=60.77 E-value=58 Score=29.93 Aligned_cols=35 Identities=17% Similarity=0.092 Sum_probs=26.0
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVN 46 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~ 46 (489)
+|||+|+-.|..+ +..-++|.++||+|..+.+..+
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPD 36 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCC
Confidence 5899999888554 3445788889999987766433
No 101
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=59.99 E-value=66 Score=31.95 Aligned_cols=96 Identities=15% Similarity=0.109 Sum_probs=55.7
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhh-hC--CCceEEEEeeCCcccCCCCCCCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAV-QS--GLQIRLVEIQFPWQEAGLPQGCE 83 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~i~~~~~~~~~~~~~~ 83 (489)
..||+++. .-.-.+.|++.|.+-|-+|..+......+...+...... .. +.+...+. .
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v~~----------~---- 420 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFI----------N---- 420 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEE----------S----
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEEEE----------C----
Confidence 35777763 344567788888888999886655443333333222110 00 00111110 0
Q ss_pred CCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHc-------CCCcEEE
Q 042970 84 NFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKF-------NVPRIVF 145 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~l-------gIP~v~l 145 (489)
.....+.+++++ .+||++|.++. +..+|+++ |||++.+
T Consensus 421 -------------------~d~~~l~~~i~~--~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 421 -------------------CDLWHFRSLMFT--RQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp -------------------CCHHHHHHHHHH--HCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred -------------------CCHHHHHHHHhh--cCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 012356666777 69999998853 47778888 9999873
No 102
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=59.73 E-value=44 Score=31.04 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=33.6
Q ss_pred CcEEEEec-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 042970 7 EFHILLLP-FLAQGHLIPMFDMARLLANHRAIVTIVTTPVNA 47 (489)
Q Consensus 7 ~~~vl~~~-~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~ 47 (489)
+++|+|++ -|+.|-..-..+||..|+++|+.|.++......
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 45666655 569999999999999999999999999776443
No 103
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=59.57 E-value=98 Score=30.76 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=26.2
Q ss_pred HHHHHHHhhcCCCCcEEEECCCCcchHHHHHHc-------CCCcEEE
Q 042970 106 LPFENLFSEQSPKPCCIISDMGYPWTVDTAAKF-------NVPRIVF 145 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~l-------gIP~v~l 145 (489)
..+++++++ .+||+||..+.. ..+|+++ |||++.+
T Consensus 428 ~~l~~~i~~--~~pDLlig~s~~---k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 428 WHLRSLVFT--DKPDFMIGNSYG---KFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHH--TCCSEEEECTTH---HHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHHh--cCCCEEEECccH---HHHHHHhhcccccCCCceEEe
Confidence 366677777 899999998643 4466666 9999974
No 104
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=59.31 E-value=71 Score=29.70 Aligned_cols=99 Identities=10% Similarity=0.063 Sum_probs=57.5
Q ss_pred cEEEEecCCCcc--C--HHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCC
Q 042970 8 FHILLLPFLAQG--H--LIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCE 83 (489)
Q Consensus 8 ~~vl~~~~p~~G--H--v~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (489)
.-|++.|..... . ..-+.+|++.|.++|++|.++..+...+..++..... +. .... +...
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~---~~--~~~~---------l~g~-- 249 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM---ET--KPIV---------ATGK-- 249 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC---SS--CCEE---------CTTC--
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc---cc--ccEE---------eeCC--
Confidence 345555544322 1 3468999999999999999877665555444432211 00 0000 0000
Q ss_pred CCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEec
Q 042970 84 NFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~ 147 (489)
....++..+++ +.|++|+. ..+...+|..+|+|.|.++.
T Consensus 250 -------------------~sl~e~~ali~----~a~~~i~~--DsG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 250 -------------------FQLGPLAAAMN----RCNLLITN--DSGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp -------------------CCHHHHHHHHH----TCSEEEEE--SSHHHHHHHTTTCCEEEECS
T ss_pred -------------------CCHHHHHHHHH----hCCEEEEC--CCCHHHHHHhcCCCEEEEEC
Confidence 01224455553 67888853 14667789999999999754
No 105
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=59.13 E-value=10 Score=30.14 Aligned_cols=43 Identities=14% Similarity=0.064 Sum_probs=26.2
Q ss_pred CCCCCCCcEEEEecCCCccC--HHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 1 MASEASEFHILLLPFLAQGH--LIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GH--v~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|+.+|++.=|++...| +|+ ..-.+.+|..+.+.||+|.++-..
T Consensus 1 ~~~~Mkk~~ivv~~~P-~g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 1 MSEVVKKFMYLNRKAP-YGTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp ----CCEEEEEECSCT-TTSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred CccchhEEEEEEeCCC-CCcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 6555655444444444 454 444578899999999999887654
No 106
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=58.79 E-value=86 Score=26.78 Aligned_cols=106 Identities=12% Similarity=-0.029 Sum_probs=56.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENF 85 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (489)
+||+++.++..+.+. +|.+.+++. +|+|..+.+............. .++.+..++ +....
T Consensus 1 ~riaVl~SG~Gs~L~---aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~--------~~~~~-- 62 (209)
T 1meo_A 1 ARVAVLISGTGSNLQ---ALIDSTREPNSSAQIDIVISNKAAVAGLDKAER-----AGIPTRVIN--------HKLYK-- 62 (209)
T ss_dssp CEEEEEESSSCTTHH---HHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH-----TTCCEEECC--------GGGSS--
T ss_pred CeEEEEEECCchHHH---HHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH-----cCCCEEEEC--------ccccC--
Confidence 478888877755444 344555554 7999777544332222221121 256665543 11100
Q ss_pred CCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 86 DMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
. . ..+.+.+.+.+++ .++|+||+-.+. .-...+-..+.-.++-+++
T Consensus 63 ----~-r---------~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 109 (209)
T 1meo_A 63 ----N-R---------VEFDSAIDLVLEE--FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHP 109 (209)
T ss_dssp ----S-H---------HHHHHHHHHHHHH--TTCCEEEEESCCSCCCHHHHHHTTTSEEEEES
T ss_pred ----c-h---------hhhhHHHHHHHHh--cCCCEEEEcchhhhCCHHHHhhhcCCEEEEcc
Confidence 0 0 1123456677777 899999866543 3444555555556666543
No 107
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=57.21 E-value=12 Score=30.11 Aligned_cols=35 Identities=17% Similarity=0.110 Sum_probs=26.7
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
...++|+++-.+..| ..+++.|.++|++|+++...
T Consensus 17 ~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 456899998655444 56789999999999998653
No 108
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=57.20 E-value=9.4 Score=32.83 Aligned_cols=44 Identities=20% Similarity=0.121 Sum_probs=33.5
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhh
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLAN-HRAIVTIVTTPVNAAR 49 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~-rGH~V~~~~~~~~~~~ 49 (489)
++++||++...|+.+=+ -...|.+.|++ +|++|.++.++.....
T Consensus 17 l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~f 61 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHF 61 (206)
T ss_dssp CSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGS
T ss_pred cCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHH
Confidence 45678999999987744 56999999999 8999999988855443
No 109
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=56.31 E-value=69 Score=29.27 Aligned_cols=40 Identities=13% Similarity=-0.032 Sum_probs=25.9
Q ss_pred HHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 042970 107 PFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHGF 148 (489)
Q Consensus 107 ~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~~ 148 (489)
.+.+.+++ .++|+||+-.+. .-...+-......++-++++
T Consensus 66 ~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHH--TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHh--cCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 34556677 799999976543 34555555555667777655
No 110
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=55.59 E-value=14 Score=32.30 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=35.3
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPV 45 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~ 45 (489)
+++|++...|+.|-..-++++|..|+++|+.|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 688999999999999999999999999999998876543
No 111
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=53.77 E-value=26 Score=30.43 Aligned_cols=152 Identities=12% Similarity=0.032 Sum_probs=76.8
Q ss_pred hccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchH
Q 042970 273 WLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQV 352 (489)
Q Consensus 273 ~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~ 352 (489)
|++-.. ++|+.|+.|.+. ...+..|.+.|..+.++..... +.+..-....++.+....-+.
T Consensus 26 fl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~~-----------~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTVS-----------AEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSCC-----------HHHHHHHHTTSCEEECSCCCG
T ss_pred EEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCCC-----------HHHHHHHHcCCcEEEECCCCH
Confidence 555443 558888777543 2344556667888776653211 112111123345443333334
Q ss_pred hhhcCCCccccccccChhhHHHHHH----hCCcEeecCCcCcchhhH-----HHHHHHhcceeEecccCCcccccccccc
Q 042970 353 MILSHPAVGGFLTHCGWNSSLEGIS----AGVQMLTWPLFGDQFCNE-----KLIVEVLRIGVSVGVEVPLKFGEEEKIG 423 (489)
Q Consensus 353 ~ll~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na-----~~v~e~~g~G~~l~~~~~~~~~~~~~~~ 423 (489)
..|..+++ +|.--|--.+.+.++ .|+|+-+ .|.|..+ +.+ ++-++-+.+.+. +++
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv-~rg~l~iaIST~---------G~s 150 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQF-SRGRLSLAISTD---------GAS 150 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEE-EETTEEEEEECT---------TSC
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEE-EeCCEEEEEECC---------CCC
Confidence 45666666 887777655554443 3555332 3444332 222 222222333222 111
Q ss_pred ccccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHH
Q 042970 424 VLVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRA 462 (489)
Q Consensus 424 ~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~ 462 (489)
-.-+..|++.|...+ ++....+.+.+.++++.+++.
T Consensus 151 -P~la~~iR~~ie~~l--p~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 151 -PLLTKRIKEDLSSNY--DESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp -HHHHHHHHHHHHHHS--CTHHHHHHHHHHHHHHHHHHC
T ss_pred -cHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHH
Confidence 234567888888888 344556777777777777654
No 112
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=53.58 E-value=23 Score=31.33 Aligned_cols=42 Identities=17% Similarity=0.008 Sum_probs=29.7
Q ss_pred CCCC-CcEEEEecCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 3 SEAS-EFHILLLPFLAQG-----------HLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 3 ~~~~-~~~vl~~~~p~~G-----------Hv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+||+ ++||+++.....+ ...=++.--..|++.|++|+++++.
T Consensus 4 ~m~~~mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 4 SMAPLPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp ---CCCSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccccCCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4554 4689888777422 2566777788999999999999865
No 113
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=53.02 E-value=14 Score=32.87 Aligned_cols=38 Identities=16% Similarity=0.084 Sum_probs=31.4
Q ss_pred CCCcEEEEecCC---CccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 5 ASEFHILLLPFL---AQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 5 ~~~~~vl~~~~p---~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
|..+|.+|++.+ +.|-=.-.-.|++.|.+||+.|+..=
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K 60 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIK 60 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeee
Confidence 567899999977 55666677889999999999999984
No 114
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=52.93 E-value=96 Score=29.96 Aligned_cols=44 Identities=20% Similarity=0.076 Sum_probs=35.8
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhHHH
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLAN-HRAIVTIVTTPVNAARLKT 52 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~-rGH~V~~~~~~~~~~~~~~ 52 (489)
-+++...|+.|-..-.+.+|...+. .|..|.|++.+...+.+..
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l~~ 246 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQLTL 246 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHH
Confidence 4667778899999999999999987 4899999998876654443
No 115
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=52.57 E-value=12 Score=31.51 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=33.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhH
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARL 50 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~ 50 (489)
.||++...|+.|=+ =...|.+.|+++|++|.++.++.....+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 47888888886555 6799999999999999999887555433
No 116
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=52.46 E-value=3.7 Score=43.13 Aligned_cols=120 Identities=11% Similarity=0.066 Sum_probs=81.5
Q ss_pred EecccchHhhhcCCCccccccccChhhHHHHHHhCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccc
Q 042970 345 IRGWVPQVMILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGV 424 (489)
Q Consensus 345 v~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~ 424 (489)
+.++.+-.++|..+++ +||-- ...+.|.+..++|+|......|+..+. .. |...+..+.+ -| ..
T Consensus 603 ~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-----~r--g~y~d~~~~~-pg-----~~ 666 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-----LR--GFYMNYMEDL-PG-----PI 666 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-----CC--SBSSCTTSSS-SS-----CE
T ss_pred CCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-----cC--CcccChhHhC-CC-----Ce
Confidence 4456677889999999 99884 456779999999999998777765321 12 3333321000 00 01
Q ss_pred cccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHcCC
Q 042970 425 LVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEGGSSYNNIQLFFQDIMQQP 484 (489)
Q Consensus 425 ~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 484 (489)
.-+.++|.++|.....+. ..|+++.+++.+.+-.. ++|.++++.++.+++......
T Consensus 667 ~~~~~eL~~~i~~~~~~~---~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~~~ 722 (729)
T 3l7i_A 667 YTEPYGLAKELKNLDKVQ---QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKEQL 722 (729)
T ss_dssp ESSHHHHHHHHTTHHHHH---HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHHHC
T ss_pred ECCHHHHHHHHhhhhccc---hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcCcc
Confidence 467788988888776421 26778888888777544 788999999999888776544
No 117
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=51.52 E-value=33 Score=34.60 Aligned_cols=50 Identities=10% Similarity=0.007 Sum_probs=41.7
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHH
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLA 55 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~ 55 (489)
.+.+||+.+.++-.|-....-++..|..+|++|+.+....-.+.+.....
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~ 146 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAK 146 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 36899999999999999999999999999999999876655555544443
No 118
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=51.44 E-value=59 Score=30.36 Aligned_cols=40 Identities=13% Similarity=0.083 Sum_probs=33.5
Q ss_pred CcEEEEec-CCCccCHHHHHHHHHHHH--hCCCeEEEEeCCcc
Q 042970 7 EFHILLLP-FLAQGHLIPMFDMARLLA--NHRAIVTIVTTPVN 46 (489)
Q Consensus 7 ~~~vl~~~-~p~~GHv~P~l~La~~L~--~rGH~V~~~~~~~~ 46 (489)
.++|++++ -|+.|-..-..+||..|+ ++|+.|.++.....
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 45677665 579999999999999999 89999999977643
No 119
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=50.89 E-value=10 Score=36.68 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=24.9
Q ss_pred HHHHHHHhhcCCCCcEEEE--CCCCcchHHHHHHcCCCc
Q 042970 106 LPFENLFSEQSPKPCCIIS--DMGYPWTVDTAAKFNVPR 142 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~--D~~~~~~~~~A~~lgIP~ 142 (489)
+.+.++.++ .++|.|++ |.....+..+++.+|+|.
T Consensus 65 ~~~~~~~~~--~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 DVVRQTFVE--FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHH--SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHHhhhh--cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 345666677 79999984 333345677889999995
No 120
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=50.76 E-value=11 Score=34.24 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=23.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
||||++ |+.|-+= -.|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 576655 3445443 4688999999999999864
No 121
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=50.71 E-value=11 Score=35.06 Aligned_cols=34 Identities=18% Similarity=0.048 Sum_probs=28.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+.+||+++-.|..| ..+|..|+++||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 35789999888777 45789999999999999753
No 122
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=50.52 E-value=93 Score=30.26 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=28.6
Q ss_pred HHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 042970 106 LPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVF 145 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l 145 (489)
..+++++++ .+||++|.++. ...+|+++|||++.+
T Consensus 375 ~~l~~~i~~--~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 375 FDVHQWIKN--EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHH--SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHHh--cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 356777887 89999998854 577899999999974
No 123
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=50.29 E-value=8.7 Score=35.25 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=27.1
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|+.+..+++|.|+-.+..|. .+|+.|+++||+|+++..
T Consensus 1 M~~~~~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 55556678999998887774 689999999999998843
No 124
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=50.04 E-value=26 Score=29.18 Aligned_cols=45 Identities=9% Similarity=-0.060 Sum_probs=30.0
Q ss_pred eEEecccchHh-hhcCCCccccccccChhhHH---HHHHhCCcEeecCC
Q 042970 343 LLIRGWVPQVM-ILSHPAVGGFLTHCGWNSSL---EGISAGVQMLTWPL 387 (489)
Q Consensus 343 ~~v~~~~pq~~-ll~~~~~~~~I~HgG~~s~~---eal~~GvP~l~~P~ 387 (489)
.++++..++.. ++..-+-..++--||.||+. |++.+++|++++|.
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~ 139 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGT 139 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESC
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcC
Confidence 34556666533 44333334466789999876 45779999999998
No 125
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=49.89 E-value=80 Score=30.58 Aligned_cols=42 Identities=14% Similarity=0.186 Sum_probs=35.0
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAA 48 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~ 48 (489)
+..|+++..++.|-..-...||..|+++|+.|.++.......
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 456677777899999999999999999999999997665543
No 126
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=49.81 E-value=11 Score=35.32 Aligned_cols=34 Identities=21% Similarity=0.094 Sum_probs=26.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|+++||+++-.|..|. .+|..|.++||+|+++..
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 5568999998877664 478889999999998854
No 127
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=49.35 E-value=29 Score=27.65 Aligned_cols=96 Identities=13% Similarity=0.083 Sum_probs=59.0
Q ss_pred EEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCCCCCc
Q 042970 11 LLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFDMLPS 90 (489)
Q Consensus 11 l~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (489)
+|++..- .+=.-++.+|+.|.+.|+++. ++......+++. |+....+.. ..++..
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i~--AT~GTa~~L~~~---------Gi~v~~v~k------~~egg~------- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKLF--ATEATSDWLNAN---------NVPATPVAW------PSQEGQ------- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEEE--EEHHHHHHHHHT---------TCCCEEECC------GGGC---------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEEE--ECchHHHHHHHc---------CCeEEEEEe------ccCCCc-------
Confidence 5555543 456779999999999999754 344444445433 555555431 111100
Q ss_pred hhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC--------cchHHHHHHcCCCcEE
Q 042970 91 IDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY--------PWTVDTAAKFNVPRIV 144 (489)
Q Consensus 91 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~--------~~~~~~A~~lgIP~v~ 144 (489)
....+.+.+++++ .++|+||.-+-. +.-...|-.+|||+++
T Consensus 82 -----------~~~~~~i~d~i~~--g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 82 -----------NPSLSSIRKLIRD--GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp --------------CBCHHHHHHT--TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred -----------ccccccHHHHHHC--CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0011356777888 899999976532 1345568899999997
No 128
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=49.03 E-value=26 Score=30.89 Aligned_cols=39 Identities=13% Similarity=0.143 Sum_probs=28.8
Q ss_pred CCcEEEEecCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQG-----------HLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~G-----------Hv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
.++||+++.....+ ...=++.--..|++.|++|+++++.
T Consensus 2 ~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 2 TPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp -CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35688888876432 2356777788899999999999865
No 129
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=47.33 E-value=11 Score=34.57 Aligned_cols=37 Identities=27% Similarity=0.359 Sum_probs=29.8
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
|..+...++|.|+-.+..|. .+|+.|+++||+|+++.
T Consensus 3 m~~~~~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp CCCCCCSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEEC
T ss_pred CCcccCCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEe
Confidence 45555678999998887764 68999999999999874
No 130
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=45.57 E-value=24 Score=31.44 Aligned_cols=41 Identities=20% Similarity=0.125 Sum_probs=31.3
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAA 48 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~ 48 (489)
++||||+.-=-+. |---+..|+++|.+ +|+|+++++..+..
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 4689988875554 55568889999977 89999999876554
No 131
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=45.39 E-value=99 Score=26.71 Aligned_cols=20 Identities=10% Similarity=0.290 Sum_probs=15.8
Q ss_pred chHHHHHHHhhcCCCCcEEEEC
Q 042970 104 LQLPFENLFSEQSPKPCCIISD 125 (489)
Q Consensus 104 ~~~~l~~ll~~~~~~~D~VI~D 125 (489)
....+.+++++ .+||+|++.
T Consensus 83 ~~~~l~~~ir~--~~P~~V~t~ 102 (227)
T 1uan_A 83 QRLKLAQALRR--LRPRVVFAP 102 (227)
T ss_dssp HHHHHHHHHHH--HCEEEEEEE
T ss_pred HHHHHHHHHHH--hCCCEEEeC
Confidence 45677788888 899999964
No 132
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=44.48 E-value=23 Score=32.92 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=50.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhH
Q 042970 293 LTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSS 372 (489)
Q Consensus 293 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~ 372 (489)
.+.+....+.+++.+.+++.||.+.++..... +.++++...+-.+|.. ||=.+-...+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~r--------------------lL~~lD~~~i~~~PK~--~~GySDiTaL 119 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYNSNG--------------------LLKYLDYDLIRENPKF--FCGYSDITAL 119 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCGGG--------------------GGGGCCHHHHHTSCCE--EEECGGGHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccHHH--------------------HHhhcChhHHHhCCeE--EEEecchHHH
Confidence 44566778999999999999999887654332 2244444555556666 7777776677
Q ss_pred HHHHH--hCCcEeecCCc
Q 042970 373 LEGIS--AGVQMLTWPLF 388 (489)
Q Consensus 373 ~eal~--~GvP~l~~P~~ 388 (489)
+-+++ .|++.+.-|..
T Consensus 120 ~~al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 120 NNAIYTKTGLVTYSGPHF 137 (331)
T ss_dssp HHHHHHHHCBCEEECCCG
T ss_pred HHHHHHhhCCcEEEccch
Confidence 76666 47777666653
No 133
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=44.35 E-value=51 Score=31.91 Aligned_cols=36 Identities=11% Similarity=-0.052 Sum_probs=25.9
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 4 EASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+|...|||++..+ . --+.+++++++.|++|+++.+.
T Consensus 3 ~m~~~kiLI~g~g---~--~a~~i~~aa~~~G~~~v~v~~~ 38 (446)
T 3ouz_A 3 AMEIKSILIANRG---E--IALRALRTIKEMGKKAICVYSE 38 (446)
T ss_dssp TTCCCEEEECCCH---H--HHHHHHHHHHHTTCEEEEEEEG
T ss_pred ccccceEEEECCC---H--HHHHHHHHHHHcCCEEEEEEcC
Confidence 3445678875432 2 4578999999999999888544
No 134
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=44.35 E-value=66 Score=28.34 Aligned_cols=58 Identities=9% Similarity=0.056 Sum_probs=34.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC-CcchhhHHHHHHHhhhCCCceEEEE
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT-PVNAARLKTVLARAVQSGLQIRLVE 68 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (489)
-|+++++.++.| + -..+|++|+++|++|.++.. ..+.+...+........+..+.++.
T Consensus 11 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (262)
T 3ksu_A 11 NKVIVIAGGIKN-L--GALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQ 69 (262)
T ss_dssp TCEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEE
Confidence 467777777654 2 46889999999999998753 3333334433333222233444443
No 135
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=43.12 E-value=27 Score=31.28 Aligned_cols=34 Identities=29% Similarity=0.294 Sum_probs=25.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
++++|+++- + |-+ -..|++.|.++||+|+.++-.
T Consensus 2 ~~~~ilVtG--a-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAG--C-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEEC--C-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEEC--C-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 456787773 4 633 357899999999999998643
No 136
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=42.40 E-value=24 Score=26.61 Aligned_cols=37 Identities=11% Similarity=0.041 Sum_probs=25.9
Q ss_pred cEEEEecCC-CccCHHHHHHHHHHHHhC-CC-eEEEEeCC
Q 042970 8 FHILLLPFL-AQGHLIPMFDMARLLANH-RA-IVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p-~~GHv~P~l~La~~L~~r-GH-~V~~~~~~ 44 (489)
.-|++...| +.......+.+|..+.+. || +|+++-..
T Consensus 4 ~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 4 IVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp EEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 334444444 345567789999999999 99 99877655
No 137
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=42.29 E-value=36 Score=30.76 Aligned_cols=38 Identities=16% Similarity=0.087 Sum_probs=24.1
Q ss_pred CCCcEEEEec-CCCccCHHHHH--HHHHHHHhCCCeEEEEe
Q 042970 5 ASEFHILLLP-FLAQGHLIPMF--DMARLLANHRAIVTIVT 42 (489)
Q Consensus 5 ~~~~~vl~~~-~p~~GHv~P~l--~La~~L~~rGH~V~~~~ 42 (489)
|++||||++- .|-...++-.+ ...+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 5678888775 44444344433 35677888999999873
No 138
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=41.90 E-value=20 Score=27.81 Aligned_cols=32 Identities=13% Similarity=0.326 Sum_probs=23.9
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
.++|+++-. |.+- ..+|+.|.++||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 468888843 5553 3578999999999998864
No 139
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=41.44 E-value=32 Score=27.12 Aligned_cols=94 Identities=11% Similarity=0.054 Sum_probs=60.3
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHH-HHHHhhhCCCceEEEEeeCCcccCCCC-CCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTPVNAARLKT-VLARAVQSGLQIRLVEIQFPWQEAGLP-QGC 82 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~ 82 (489)
+++|.++.- -.+=.-++.+|+.|.+. ||++. ++......+++ . |+....+. ..+ +
T Consensus 3 ~~~ialsv~--D~dK~~~v~~a~~~~~ll~Gf~l~--AT~gTa~~L~e~~---------Gl~v~~v~------k~~~e-- 61 (134)
T 2xw6_A 3 MRALALIAH--DAKKEEMVAFCQRHREVLARFPLV--ATGTTGRRIEEAT---------GLTVEKLL------SGPLG-- 61 (134)
T ss_dssp SCEEEEEEC--GGGHHHHHHHHHHTHHHHTTSCEE--ECHHHHHHHHHHH---------CCCCEECS------CGGGT--
T ss_pred ccEEEEEEe--cccHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHhh---------CceEEEEE------ecCCC--
Confidence 345555533 34456789999999999 99654 56666666665 3 45444321 011 1
Q ss_pred CCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCC--C--------cchHHHHHHcCCCcEE
Q 042970 83 ENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMG--Y--------PWTVDTAAKFNVPRIV 144 (489)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~--~--------~~~~~~A~~lgIP~v~ 144 (489)
-.+.+.+++++ .+.|+||.-+- . ..-..+|-..|||+++
T Consensus 62 ---------------------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 62 ---------------------GDQQMGARVAE--GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred ---------------------CcchHHHHHHC--CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 12467788888 89999995332 2 1246689999999998
No 140
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=41.39 E-value=25 Score=32.33 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=26.3
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
.++||+++-.|+.| ..+|..|++.||+|+++.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~ 49 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIA 49 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEE
Confidence 46899999988887 467899999999999983
No 141
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=41.18 E-value=57 Score=24.36 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=30.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|+++||+++|..+.|--.=.-.+=+.+.++|.++.+-...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 4567899999887776655557778888899998766443
No 142
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=40.32 E-value=18 Score=28.42 Aligned_cols=32 Identities=13% Similarity=0.103 Sum_probs=24.6
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+.||+++-.+ .+ -..+|+.|.++||+|+++..
T Consensus 6 ~~~v~I~G~G---~i--G~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSE---AA--GVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCS---HH--HHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCC---HH--HHHHHHHHHHCCCeEEEEEC
Confidence 4578888654 33 35789999999999998854
No 143
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=40.04 E-value=42 Score=30.65 Aligned_cols=33 Identities=18% Similarity=0.081 Sum_probs=27.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPV 45 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~ 45 (489)
+||+++-.|+.|- .+|..|.++||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 6899999988884 56889999999999997653
No 144
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.88 E-value=1.6e+02 Score=24.61 Aligned_cols=38 Identities=11% Similarity=-0.051 Sum_probs=28.7
Q ss_pred HHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchH
Q 042970 107 PFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVFHGFSC 150 (489)
Q Consensus 107 ~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l~~~~~ 150 (489)
.+.++.+ .++|+||.|. .+..+|+++|+|.+.+.+...
T Consensus 134 ~i~~l~~---~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 134 LISKVKT---ENIKIVVSGK---TVTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp HHHHHHH---TTCCEEEECH---HHHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHH---CCCeEEECCH---HHHHHHHHcCCcEEEEecCHH
Confidence 4444444 5999999983 458999999999999876443
No 145
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=39.76 E-value=45 Score=30.64 Aligned_cols=40 Identities=25% Similarity=0.247 Sum_probs=30.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTV 53 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~ 53 (489)
+||+++-.|+.|- .+|..|.+.||+|+++.... .+.+++.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 6899998888774 57889999999999997654 2444433
No 146
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=39.66 E-value=19 Score=34.08 Aligned_cols=30 Identities=27% Similarity=0.221 Sum_probs=25.8
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
.|||+++-.+-.| +.+|..|+++||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 3789999877555 88999999999999998
No 147
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=38.65 E-value=20 Score=33.18 Aligned_cols=38 Identities=24% Similarity=0.172 Sum_probs=26.9
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|++ ++..+|.|+-.|..|. .+|..|+++||+|+++...
T Consensus 1 m~~-~~~~kI~vIGaG~MG~-----~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MAS-PAAGDVLIVGSGLVGR-----SWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -------CEEEEECCSHHHH-----HHHHHHHHTTCCEEEECSC
T ss_pred CCC-CCCceEEEEeeCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 633 5678999998887774 6788999999999998543
No 148
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=38.57 E-value=27 Score=30.40 Aligned_cols=46 Identities=15% Similarity=-0.048 Sum_probs=35.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHH-HhCCCeEEEEeCCcchhhHHHH
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLL-ANHRAIVTIVTTPVNAARLKTV 53 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L-~~rGH~V~~~~~~~~~~~~~~~ 53 (489)
.-+++...|+.|-..=.+++|... .+.|..|.+++.+...+.+...
T Consensus 31 ~l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~ 77 (251)
T 2zts_A 31 TTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRRE 77 (251)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHH
Confidence 346777788999999999988764 5558889999888776655443
No 149
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=38.35 E-value=1e+02 Score=27.15 Aligned_cols=35 Identities=20% Similarity=0.152 Sum_probs=24.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
|.+.++++++.++.| + -..+|++|+++|++|++..
T Consensus 23 m~~~k~vlITGas~g-I--G~a~a~~l~~~G~~V~~~~ 57 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG-I--GAAVCRLAARQGWRVGVNY 57 (272)
T ss_dssp -CCSCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEc
Confidence 334567777766532 2 4688999999999998763
No 150
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=37.93 E-value=45 Score=33.21 Aligned_cols=97 Identities=9% Similarity=0.088 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCCCCCchhhHHHHHHH
Q 042970 21 LIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFDMLPSIDLASKFFNS 100 (489)
Q Consensus 21 v~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (489)
=.-++.+|+.|.+.|+++. ++......+++. |+....+.- . -++|+.....-..-.......+..
T Consensus 15 K~~iv~lAk~L~~lGf~I~--ATgGTAk~L~e~---------GI~v~~V~k--~-TgfPE~l~GRVKTLHP~ihgGiLa- 79 (593)
T 1g8m_A 15 KAGLVEFARSLNALGLGLI--ASGGTATALRDA---------GLPVRDVSD--L-TGFPEMLGGRVKTLHPAVHAGILA- 79 (593)
T ss_dssp CTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEEHHH--H-HSCCCBGGGTBSSCSHHHHHHHHC-
T ss_pred cHhHHHHHHHHHHCCCEEE--EchHHHHHHHHC---------CCeEEEeec--c-cCCchhhcCCccccCchhhhhhcc-
Confidence 3457899999999998875 466566666655 566655431 1 256665543221111233333332
Q ss_pred HhhchHHHHHHHhhcCCCCcEEEECCCCcchHHH
Q 042970 101 HSMLQLPFENLFSEQSPKPCCIISDMGYPWTVDT 134 (489)
Q Consensus 101 ~~~~~~~l~~ll~~~~~~~D~VI~D~~~~~~~~~ 134 (489)
+.....+.++-+.--..+|+||++ ++++-..+
T Consensus 80 -r~~~~h~~~l~~~~I~~iDlVvvN-LYPF~~tv 111 (593)
T 1g8m_A 80 -RNIPEDNADMNKQDFSLVRVVVCN-LYPFVKTV 111 (593)
T ss_dssp -CSSHHHHHHHHHTTCCCEEEEEEE-CCCHHHHH
T ss_pred -CCCHHHHHHHHHcCCCceeEEEEe-ccCHHHhh
Confidence 444445544443323578999998 55544433
No 151
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=37.64 E-value=29 Score=26.86 Aligned_cols=35 Identities=20% Similarity=0.074 Sum_probs=24.3
Q ss_pred HHHhhcCCCCcEEEECCCCc--chHHHHHH---cCCCcEEEe
Q 042970 110 NLFSEQSPKPCCIISDMGYP--WTVDTAAK---FNVPRIVFH 146 (489)
Q Consensus 110 ~ll~~~~~~~D~VI~D~~~~--~~~~~A~~---lgIP~v~l~ 146 (489)
+++++ .+||+||.|...+ -|..+++. .++|.|.++
T Consensus 47 ~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 47 DIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 44566 7999999998765 45555544 478877654
No 152
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=37.58 E-value=24 Score=28.62 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=30.7
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcch
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNA 47 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~ 47 (489)
..+++++..+. | +.|++.+++.|.++|.+|+++ ...+.
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 45788887775 3 999999999999999999998 55443
No 153
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=37.57 E-value=1.8e+02 Score=28.54 Aligned_cols=44 Identities=7% Similarity=-0.147 Sum_probs=36.3
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcchhhHHH
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANH-RAIVTIVTTPVNAARLKT 52 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~r-GH~V~~~~~~~~~~~~~~ 52 (489)
=+++...|+.|-..=.+++|..++.+ |..|.+++.+...+.+..
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l~~ 288 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEETAE 288 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHHHH
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHHHH
Confidence 35667788999999999999999987 999999998877655443
No 154
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=37.14 E-value=43 Score=23.26 Aligned_cols=50 Identities=18% Similarity=0.147 Sum_probs=32.4
Q ss_pred hCCcEeecCCcCcchh-hHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhcc
Q 042970 378 AGVQMLTWPLFGDQFC-NEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMD 440 (489)
Q Consensus 378 ~GvP~l~~P~~~DQ~~-na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~ 440 (489)
+|+|++++-..+.|.. |-..- |..+-|+..+.- ..-++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqn-eakkegvsydvl------------kstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQN-EAKKEGVSYDVL------------KSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHH-HHHHHTCEEEEE------------ECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHH-HHHhcCcchhhh------------ccCCHHHHHHHHHHHHH
Confidence 7999999988877765 33333 344444444322 14788999998888773
No 155
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=37.09 E-value=1.4e+02 Score=26.46 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=24.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
.|+++++.++.| =-.++|+.|+++|++|.++.
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 60 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITG 60 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEe
Confidence 467777766543 23578999999999999886
No 156
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=36.95 E-value=51 Score=28.55 Aligned_cols=41 Identities=15% Similarity=0.096 Sum_probs=29.0
Q ss_pred HHHHHHHhhcCCCCcEEEECCCCcc-------hHHHHHHcCCCcEEEe
Q 042970 106 LPFENLFSEQSPKPCCIISDMGYPW-------TVDTAAKFNVPRIVFH 146 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~~~~-------~~~~A~~lgIP~v~l~ 146 (489)
+.+.++++.+..+||+|++|..... |..+...+|+|+|.+.
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 3455556665568999999986654 3445666789999864
No 157
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=36.43 E-value=25 Score=30.57 Aligned_cols=35 Identities=9% Similarity=0.081 Sum_probs=31.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
|||+|..-|+.|=..=...||..|+++|+.|.++=
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD 35 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVD 35 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEE
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEe
Confidence 46888778899999999999999999999999984
No 158
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=35.98 E-value=44 Score=30.71 Aligned_cols=76 Identities=12% Similarity=0.165 Sum_probs=54.8
Q ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhc-CCCccccccccCh
Q 042970 291 CNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILS-HPAVGGFLTHCGW 369 (489)
Q Consensus 291 ~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~-~~~~~~~I~HgG~ 369 (489)
...+.+....+.+++.+.+++.||.+.++.... ++.++++...+-. +|.. ||=++-.
T Consensus 62 agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga~--------------------rlLp~LD~~~i~~a~PK~--~iGySDi 119 (311)
T 1zl0_A 62 AGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCG--------------------QLLPGLDWGRLQAASPRP--LIGFSDI 119 (311)
T ss_dssp SSCHHHHHHHHHHHHHSTTEEEEEESCCSSCGG--------------------GGTTTCCHHHHHHSCCCC--EEECGGG
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEccCCcCHH--------------------HHhhccchhhhhccCCCE--EEEEchh
Confidence 344566777899999999999999988765432 2334555555555 7777 8888888
Q ss_pred hhHHHHHH-hCCcEeecCCc
Q 042970 370 NSSLEGIS-AGVQMLTWPLF 388 (489)
Q Consensus 370 ~s~~eal~-~GvP~l~~P~~ 388 (489)
..++-+++ .|++.+.-|..
T Consensus 120 TaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 120 SVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHHHHTTCCEEECCCG
T ss_pred HHHHHHHHHcCCcEEECHhh
Confidence 88888876 38888777764
No 159
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=35.89 E-value=1.7e+02 Score=23.62 Aligned_cols=139 Identities=16% Similarity=0.159 Sum_probs=74.8
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCcc
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVG 361 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~ 361 (489)
.|-|-+||.. |....++....|+..+..+-..+.+-+. .|+.+.+ |+....--..+++
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--------~p~~~~~-----------~~~~a~~~~~~~V- 61 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK--------TAEHVVS-----------MLKEYEALDRPKL- 61 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--------CHHHHHH-----------HHHHHHTSCSCEE-
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC--------CHHHHHH-----------HHHHhhhcCCCcE-
Confidence 4677788866 5566777888888888887666554432 3332221 1110000001222
Q ss_pred ccccccCh----hhHHHHHHhCCcEeecCCcCcch--hhHHHHHHH--hcceeE-ecccCCccccccccccccccHHHHH
Q 042970 362 GFLTHCGW----NSSLEGISAGVQMLTWPLFGDQF--CNEKLIVEV--LRIGVS-VGVEVPLKFGEEEKIGVLVKKDDVE 432 (489)
Q Consensus 362 ~~I~HgG~----~s~~eal~~GvP~l~~P~~~DQ~--~na~~v~e~--~g~G~~-l~~~~~~~~~~~~~~~~~~~~~~l~ 432 (489)
+|.=.|. .++..++ .-+|+|.+|...-.. ..-.-+. + .|+.+. ++ . ..++.-++
T Consensus 62 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~v-qmp~GvpVatv~-~-------------~~nAa~lA 124 (159)
T 3rg8_A 62 -YITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSL-RMPSGISPALVL-E-------------PKNAALLA 124 (159)
T ss_dssp -EEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHH-CCCTTCCCEECC-S-------------HHHHHHHH
T ss_pred -EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHH-hCCCCCceEEec-C-------------chHHHHHH
Confidence 5655553 3444443 668999999653111 1122222 2 244422 22 2 46777776
Q ss_pred HHHHHhccCChhHHHHHHHHHHHHHHHHHHHh
Q 042970 433 TAINILMDDGEERDVRRKRAKEFEELAKRALE 464 (489)
Q Consensus 433 ~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~ 464 (489)
..|-.+ .|+ .++++.+..+...++.+.
T Consensus 125 ~~Il~~-~d~----~l~~kl~~~r~~~~~~v~ 151 (159)
T 3rg8_A 125 ARIFSL-YDK----EIADSVKSYMESNAQKII 151 (159)
T ss_dssp HHHHTT-TCH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhC-CCH----HHHHHHHHHHHHHHHHHH
Confidence 666543 566 888888888877765543
No 160
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=35.76 E-value=39 Score=30.44 Aligned_cols=37 Identities=14% Similarity=0.129 Sum_probs=29.8
Q ss_pred CcEEEEecC--CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPF--LAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~--p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+++++.+.. |+.|-..=...||..|+++|+.|.++=.
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~ 41 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDL 41 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEEC
Confidence 455665554 5889999999999999999999998843
No 161
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=35.71 E-value=98 Score=24.91 Aligned_cols=94 Identities=15% Similarity=0.095 Sum_probs=60.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHH-HHHHhhhCCCceEEEEeeCCcccCCCCCCCCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTPVNAARLKT-VLARAVQSGLQIRLVEIQFPWQEAGLPQGCEN 84 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (489)
.+|+++. .-.+=.-++.+|+.|.+. ||++. ++......+++ . |+....+. ..+++
T Consensus 12 g~V~lsv--~D~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~~---------Gl~v~~v~------k~~eG--- 69 (152)
T 1b93_A 12 KHIALVA--HDHCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRAT---------GMNVNAML------SGPMG--- 69 (152)
T ss_dssp CEEEEEE--CGGGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHHH---------CCCCEEEC------CGGGT---
T ss_pred CEEEEEE--ehhhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHHh---------CceeEEEE------ecCCC---
Confidence 3444442 234557789999999999 99654 45656666665 3 55544431 11111
Q ss_pred CCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCC--Cc-c-------hHHHHHHcCCCcEE
Q 042970 85 FDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMG--YP-W-------TVDTAAKFNVPRIV 144 (489)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~--~~-~-------~~~~A~~lgIP~v~ 144 (489)
-.+.+.+++++ .+.|+||.-+- .. . -..+|-..|||+++
T Consensus 70 -------------------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 70 -------------------GDQQVGALISE--GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp -------------------HHHHHHHHHHT--TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred -------------------CCchHHHHHHC--CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 12367788888 89999995432 32 2 35579999999997
No 162
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=35.61 E-value=38 Score=31.41 Aligned_cols=73 Identities=11% Similarity=0.080 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhH
Q 042970 293 LTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSS 372 (489)
Q Consensus 293 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~ 372 (489)
.+.+....+.+++.+.+++.||...++.....+ .++++...+-.+|.. ||=.+-..++
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~rl--------------------L~~LD~~~i~~~PK~--~~GySDiT~L 119 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGFNSNQL--------------------LPYLDYDLISENPKI--LCGFSDITAL 119 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCGGGG--------------------GGGCCHHHHHHSCCE--EEECTTHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCchhHHHH--------------------hhhcchhhhccCCeE--EEecccccHH
Confidence 345667789999999999999998776543322 234444444445555 5555555555
Q ss_pred HHHHH--hCCcEeecCC
Q 042970 373 LEGIS--AGVQMLTWPL 387 (489)
Q Consensus 373 ~eal~--~GvP~l~~P~ 387 (489)
+-+++ .|+..+.-|+
T Consensus 120 ~~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 120 ATAIYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHHHHCBCEEECCC
T ss_pred HHHHHHhcCeEEEeCcc
Confidence 55543 3444444443
No 163
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=35.57 E-value=77 Score=30.86 Aligned_cols=153 Identities=12% Similarity=0.003 Sum_probs=74.1
Q ss_pred hccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchH
Q 042970 273 WLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQV 352 (489)
Q Consensus 273 ~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~ 352 (489)
|++-. .++|+.|+.|.... ..++.|.+.+..+.+.-.... +.+..-....++.+..-.-+.
T Consensus 7 ~~~l~-~~~vlVvGgG~va~-------~k~~~L~~~ga~V~vi~~~~~-----------~~~~~l~~~~~i~~~~~~~~~ 67 (457)
T 1pjq_A 7 FCQLR-DRDCLIVGGGDVAE-------RKARLLLEAGARLTVNALTFI-----------PQFTVWANEGMLTLVEGPFDE 67 (457)
T ss_dssp EECCB-TCEEEEECCSHHHH-------HHHHHHHHTTBEEEEEESSCC-----------HHHHHHHTTTSCEEEESSCCG
T ss_pred EEECC-CCEEEEECCCHHHH-------HHHHHHHhCcCEEEEEcCCCC-----------HHHHHHHhcCCEEEEECCCCc
Confidence 44433 35588887776442 234455567777766553211 112111122344432222222
Q ss_pred hhhcCCCccccccccChhh-----HHHHHHhCCcEe--ecCCcCcchhhHHHHH-HHhcceeEecccCCccccccccccc
Q 042970 353 MILSHPAVGGFLTHCGWNS-----SLEGISAGVQML--TWPLFGDQFCNEKLIV-EVLRIGVSVGVEVPLKFGEEEKIGV 424 (489)
Q Consensus 353 ~ll~~~~~~~~I~HgG~~s-----~~eal~~GvP~l--~~P~~~DQ~~na~~v~-e~~g~G~~l~~~~~~~~~~~~~~~~ 424 (489)
..|..+++ +|.--|.-. ..+|-..|+|+- --|-..|...-+ .+. ...-+|+. .. +.
T Consensus 68 ~~l~~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIs--T~-----------Gk 131 (457)
T 1pjq_A 68 TLLDSCWL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVS--SG-----------GT 131 (457)
T ss_dssp GGGTTCSE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEE--CT-----------TS
T ss_pred cccCCccE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEE--CC-----------CC
Confidence 33445565 777767543 345666788863 333333322111 110 01223444 22 11
Q ss_pred c-ccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHH
Q 042970 425 L-VKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRA 462 (489)
Q Consensus 425 ~-~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~ 462 (489)
. .-+..|++.|...+. +....+.+.+.++++.+++.
T Consensus 132 sp~la~~ir~~ie~~l~--~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 132 SPVLARLLREKLESLLP--QHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp CHHHHHHHHHHHHHHSC--TTHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHhh
Confidence 2 225778888888884 23335666666666666544
No 164
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=35.52 E-value=27 Score=32.15 Aligned_cols=24 Identities=8% Similarity=-0.170 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCcc
Q 042970 23 PMFDMARLLANHRAIVTIVTTPVN 46 (489)
Q Consensus 23 P~l~La~~L~~rGH~V~~~~~~~~ 46 (489)
--.++|+++.++|++|+|++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 456889999999999999987643
No 165
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=35.45 E-value=45 Score=27.70 Aligned_cols=33 Identities=15% Similarity=0.070 Sum_probs=23.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
++|+++ |+.|-+ -..|+++|.++||+|+.+.-.
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 566665 333433 357889999999999988643
No 166
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=34.98 E-value=37 Score=31.36 Aligned_cols=33 Identities=15% Similarity=-0.005 Sum_probs=28.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
..+||.|+-.+..| +-.+|+.|+++||+|+..=
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEc
Confidence 35789999999877 5579999999999999873
No 167
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=34.93 E-value=71 Score=23.64 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=29.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCC
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGN 320 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~ 320 (489)
.|||-|.| +|+.+.++.+.+...|+++++.+....
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdqd 37 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQD 37 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCch
Confidence 47777665 889999999999999999999887654
No 168
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=34.87 E-value=35 Score=28.58 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=26.3
Q ss_pred CcEEEEecCCCccCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFD-MARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~-La~~L~~rGH~V~~~~~~ 44 (489)
++||+++... .|+..-+.. +++.|.+.|++|.++...
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 4688888877 888766654 455566679999887544
No 169
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=34.72 E-value=70 Score=27.95 Aligned_cols=37 Identities=11% Similarity=0.051 Sum_probs=28.2
Q ss_pred cEEEEecCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQG-----------HLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~G-----------Hv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+||+++.....+ ...=+......|.+.|++|+++++.
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 578888875321 4467777888899999999999865
No 170
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=34.56 E-value=88 Score=27.64 Aligned_cols=37 Identities=19% Similarity=0.065 Sum_probs=24.1
Q ss_pred CCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 3 SEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 3 ~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
+++.+-|+++++.++.| =-.++|++|+++|++|.+..
T Consensus 22 ~m~~~~k~~lVTGas~G---IG~aia~~la~~G~~Vv~~~ 58 (267)
T 3u5t_A 22 SMMETNKVAIVTGASRG---IGAAIAARLASDGFTVVINY 58 (267)
T ss_dssp -----CCEEEEESCSSH---HHHHHHHHHHHHTCEEEEEE
T ss_pred ccccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEc
Confidence 34444577778776543 23578999999999998864
No 171
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=34.47 E-value=41 Score=31.30 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhH
Q 042970 293 LTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSS 372 (489)
Q Consensus 293 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~ 372 (489)
.+.+....+.+++.+.+++.||.+.++..... +.++++...+-.+|.. ||=.+-...+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~r--------------------lL~~lD~~~i~~~PK~--~~GySDiTaL 120 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMNSNS--------------------LLPYIDYDAFQNNPKI--MIGYSDATAL 120 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCGGG--------------------GGGGSCHHHHHHSCCE--EEECGGGHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccHHH--------------------HhhhcChhHHhhCCeE--EEEechHHHH
Confidence 34566778999999999999999887654322 2344555555556766 7777777777
Q ss_pred HHHHH--hCCcEeecCCc
Q 042970 373 LEGIS--AGVQMLTWPLF 388 (489)
Q Consensus 373 ~eal~--~GvP~l~~P~~ 388 (489)
+-+++ .|+..+--|..
T Consensus 121 ~~al~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 121 LLGIYAKTGIPTFYGPAL 138 (336)
T ss_dssp HHHHHHHHCCCEEECCCH
T ss_pred HHHHHHhcCceEEECChh
Confidence 77776 47777777763
No 172
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=34.31 E-value=50 Score=25.86 Aligned_cols=40 Identities=13% Similarity=0.265 Sum_probs=0.0
Q ss_pred HHHHHHHhhcCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEec
Q 042970 106 LPFENLFSEQSPKPCCIISDMGYP--WTVDTAAKF-------NVPRIVFHG 147 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~~~--~~~~~A~~l-------gIP~v~l~~ 147 (489)
.+-.+++++ .+||+||.|...+ -|..+++.+ ++|.+.++.
T Consensus 47 ~~al~~~~~--~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa 95 (134)
T 3to5_A 47 LTALPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITA 95 (134)
T ss_dssp HHHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred HHHHHHHHh--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEEC
No 173
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=34.20 E-value=1.3e+02 Score=29.03 Aligned_cols=32 Identities=9% Similarity=0.038 Sum_probs=23.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
.||+++.. | .-.+.+++++++.|++|+++.+.
T Consensus 2 k~ilI~g~---g--~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIANR---G--EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp CEEEECCC---H--HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred ceEEEeCC---C--HHHHHHHHHHHHcCCEEEEEecc
Confidence 36776642 2 35678999999999999988654
No 174
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=33.69 E-value=24 Score=34.98 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=28.5
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
.|+|||++-.+..| +.+|+.|.++|++||++...
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 46899999887655 67899999999999999754
No 175
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=33.67 E-value=21 Score=28.12 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=26.6
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+.||+++-++..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 5689998776555 47899999999999998654
No 176
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=33.52 E-value=45 Score=30.65 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=27.6
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+.++|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 35799999888887 5689999999999998743
No 177
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=33.44 E-value=28 Score=31.65 Aligned_cols=32 Identities=19% Similarity=0.197 Sum_probs=25.7
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+|||.++-.|..|. .+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 46899998877664 578999999999999854
No 178
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=33.31 E-value=49 Score=27.62 Aligned_cols=40 Identities=25% Similarity=0.221 Sum_probs=27.3
Q ss_pred CCCcEEEEecCCCccCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFD-MARLLANHRAIVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~-La~~L~~rGH~V~~~~~~ 44 (489)
|+++||+++-....|+..-+.. +++.|.+.|++|.++...
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 3456888877666787766654 456667789999888544
No 179
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=33.21 E-value=52 Score=29.29 Aligned_cols=48 Identities=6% Similarity=-0.012 Sum_probs=39.5
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCCcchhhHHHH
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARL--------LANH-RAIVTIVTTPVNAARLKTV 53 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~--------L~~r-GH~V~~~~~~~~~~~~~~~ 53 (489)
.+.+|++.+.++-.|-....-++.. |..+ |++|+.+....-.+.+.+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~a 175 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKK 175 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHH
Confidence 3678999999999999999999988 9999 9999998765545544444
No 180
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=33.18 E-value=24 Score=32.15 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=27.0
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+++|.|+-.+..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 56899998888774 689999999999998853
No 181
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=32.56 E-value=29 Score=33.60 Aligned_cols=37 Identities=16% Similarity=0.065 Sum_probs=25.3
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|+++...+||.++-.|..|. .+|..|++ ||+|+++-.
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~-----~lA~~La~-G~~V~~~D~ 66 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGL-----SNGVLIAQ-NHEVVALDI 66 (432)
T ss_dssp -----CCCEEEEECCSHHHH-----HHHHHHHT-TSEEEEECS
T ss_pred cccccCCCEEEEECcCHHHH-----HHHHHHHc-CCeEEEEec
Confidence 34445668999998877663 56778887 999998853
No 182
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=32.51 E-value=48 Score=30.14 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=22.9
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPV 45 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~ 45 (489)
+|+++ |+.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 56555 333444 3578899999999999886543
No 183
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=32.50 E-value=91 Score=26.81 Aligned_cols=44 Identities=5% Similarity=-0.080 Sum_probs=29.2
Q ss_pred eEEecccchHh-hh-cCCCccccccccChhhHHHHH---------HhCCcEeecCC
Q 042970 343 LLIRGWVPQVM-IL-SHPAVGGFLTHCGWNSSLEGI---------SAGVQMLTWPL 387 (489)
Q Consensus 343 ~~v~~~~pq~~-ll-~~~~~~~~I~HgG~~s~~eal---------~~GvP~l~~P~ 387 (489)
+.+....+... ++ .+++. .++--||.||+-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 44555555432 33 34443 477889999988776 47999999864
No 184
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=32.41 E-value=46 Score=29.74 Aligned_cols=40 Identities=10% Similarity=0.159 Sum_probs=31.2
Q ss_pred HHHHHHHhhcCCCCcEEEECCCCc------chHHHHHHcCCCcEEEec
Q 042970 106 LPFENLFSEQSPKPCCIISDMGYP------WTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~~~------~~~~~A~~lgIP~v~l~~ 147 (489)
..+.++++. .+||+||+..-+. .+..+|+.||+|.++..+
T Consensus 102 ~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 102 RILTEVIKK--EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHH--HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 455666666 5899999876442 688999999999999654
No 185
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=32.29 E-value=55 Score=31.55 Aligned_cols=37 Identities=8% Similarity=-0.159 Sum_probs=25.1
Q ss_pred HHHHHHHhhcCCCCcEEEECCC---CcchHHHHHHcCCCcEE
Q 042970 106 LPFENLFSEQSPKPCCIISDMG---YPWTVDTAAKFNVPRIV 144 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~---~~~~~~~A~~lgIP~v~ 144 (489)
+.+.+++++ .++|+||..+= ........+.+|+|++.
T Consensus 57 ~~l~~~a~~--~~id~vv~g~e~~l~~~~~~~l~~~Gi~~~G 96 (431)
T 3mjf_A 57 AGLLAFAQS--HDIGLTIVGPEAPLVIGVVDAFRAAGLAIFG 96 (431)
T ss_dssp HHHHHHHHH--TTEEEEEECSHHHHHTTHHHHHHHTTCCEES
T ss_pred HHHHHHHHH--hCcCEEEECCchHHHHHHHHHHHhcCCCeeC
Confidence 355666777 79999997531 12355667788999874
No 186
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=32.24 E-value=90 Score=23.29 Aligned_cols=38 Identities=11% Similarity=0.084 Sum_probs=28.0
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
|...++++||+++- .|-.-.-.+.+.|.+.|++|..+.
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 38 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSSLGATTVLAA 38 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhCCceEEEeC
Confidence 77778888999985 455556677888888999988754
No 187
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=32.22 E-value=51 Score=25.55 Aligned_cols=26 Identities=4% Similarity=-0.010 Sum_probs=21.4
Q ss_pred cCHHHHHHHHHHHHhCCCeE-EEEeCC
Q 042970 19 GHLIPMFDMARLLANHRAIV-TIVTTP 44 (489)
Q Consensus 19 GHv~P~l~La~~L~~rGH~V-~~~~~~ 44 (489)
-.....+.+|..+.+.||+| .++-..
T Consensus 15 ~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 15 QASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred HHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 44677899999999999999 877655
No 188
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=32.21 E-value=43 Score=30.71 Aligned_cols=32 Identities=3% Similarity=-0.042 Sum_probs=26.8
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+++|+++..+ ....++++|+++||+|.++.+.
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 4789998876 4678999999999999998765
No 189
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=32.11 E-value=2e+02 Score=23.30 Aligned_cols=139 Identities=12% Similarity=0.157 Sum_probs=78.0
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHH---HhcCCCeEEecccchHhhhcCC
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEE---RIKGRGLLIRGWVPQVMILSHP 358 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~v~~~~pq~~ll~~~ 358 (489)
.|-|-+||.. |....++....|+..+..+-..+.+-+. .|+.+.+ .....+ .
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR--------~p~~~~~~~~~a~~~g---------------~ 59 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAHR--------TPKMMVQFASEARERG---------------I 59 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHHHHHHTTTTT---------------C
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCcC--------CHHHHHHHHHHHHhCC---------------C
Confidence 4667788866 5566777888888888887666655432 3433221 111111 2
Q ss_pred CccccccccC----hhhHHHHHHhCCcEeecCCcCcch--hhH-HHHHH-Hhcc--eeE-ecccCCcccccccccccccc
Q 042970 359 AVGGFLTHCG----WNSSLEGISAGVQMLTWPLFGDQF--CNE-KLIVE-VLRI--GVS-VGVEVPLKFGEEEKIGVLVK 427 (489)
Q Consensus 359 ~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~--~na-~~v~e-~~g~--G~~-l~~~~~~~~~~~~~~~~~~~ 427 (489)
++ +|.=.| ..++..++ .-+|+|.+|...... ..+ .-+.+ -.|+ +.. ++.. ...+
T Consensus 60 ~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a------------~~~n 124 (163)
T 3ors_A 60 NI--IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAA------------GAKN 124 (163)
T ss_dssp CE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHH------------HHHH
T ss_pred cE--EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCc------------ccHH
Confidence 23 665554 33444444 678999999864321 111 12220 2233 222 2200 1366
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhh
Q 042970 428 KDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEE 465 (489)
Q Consensus 428 ~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 465 (489)
+.-++..|-.+ .|+ .++++.+..++.+++.+.+
T Consensus 125 Aa~lAa~Il~~-~d~----~l~~kl~~~r~~~~~~v~~ 157 (163)
T 3ors_A 125 AGILAARMLSI-QNP----SLVEKLNQYESSLIQKVED 157 (163)
T ss_dssp HHHHHHHHHHT-TCT----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCH----HHHHHHHHHHHHHHHHHHH
Confidence 77666666544 567 8999999998888766543
No 190
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=32.03 E-value=64 Score=29.42 Aligned_cols=38 Identities=8% Similarity=-0.221 Sum_probs=28.6
Q ss_pred CcEEEEecCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGH----LIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GH----v~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
++||+++..+..+- +..-..++++|.++||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56888887764332 346788999999999999998743
No 191
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=31.94 E-value=2.4e+02 Score=27.16 Aligned_cols=45 Identities=18% Similarity=0.159 Sum_probs=36.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcchhhHHH
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLAN-HRAIVTIVTTPVNAARLKT 52 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~-rGH~V~~~~~~~~~~~~~~ 52 (489)
--+++...|+.|=..=++.+|..++. .|..|.|++.+.....+..
T Consensus 204 ~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~l~~ 249 (454)
T 2r6a_A 204 DLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVM 249 (454)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHHHH
Confidence 35677778899999999999999986 5999999998766554443
No 192
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=31.91 E-value=99 Score=31.67 Aligned_cols=40 Identities=13% Similarity=-0.031 Sum_probs=26.8
Q ss_pred HHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecch
Q 042970 108 FENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHGFS 149 (489)
Q Consensus 108 l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~~~ 149 (489)
+.+.+++ .++|+||+-.+. .-...+-+.....++-++++.
T Consensus 67 ~~~~l~~--~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 67 WVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp HHHHHHH--HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred HHHHHHh--cCCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 4455666 699999966543 455666666667778877763
No 193
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=31.88 E-value=38 Score=30.44 Aligned_cols=31 Identities=10% Similarity=0.104 Sum_probs=25.0
Q ss_pred cEEEEecC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPF-LAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~-p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
++|.|+-. |..| ..+|+.|.++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 68999987 7666 4578899999999997643
No 194
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.82 E-value=42 Score=28.64 Aligned_cols=33 Identities=24% Similarity=0.114 Sum_probs=23.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
++|+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 5 ~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 566655 3334443 57899999999999998644
No 195
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=31.76 E-value=64 Score=30.18 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=21.6
Q ss_pred CCCccccccccChhhH---HHHHHhCCcEeec
Q 042970 357 HPAVGGFLTHCGWNSS---LEGISAGVQMLTW 385 (489)
Q Consensus 357 ~~~~~~~I~HgG~~s~---~eal~~GvP~l~~ 385 (489)
+|++ +|++||+-+. ..|-..|+|.++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 6888 9999998764 4577789999863
No 196
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=31.76 E-value=2.5e+02 Score=24.10 Aligned_cols=33 Identities=27% Similarity=0.200 Sum_probs=24.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
-|+++++.++.| =-..+|++|+++|++|.+...
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeC
Confidence 456777776644 246889999999999988643
No 197
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=31.59 E-value=1.1e+02 Score=26.03 Aligned_cols=48 Identities=13% Similarity=-0.009 Sum_probs=33.3
Q ss_pred hhhhhhccCCCCCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEE
Q 042970 268 PECLTWLDSQQPSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWV 315 (489)
Q Consensus 268 ~~~~~~l~~~~~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~ 315 (489)
+-+.+|+.....+.++||..+|-.....+.+..+.++++.+|+.+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 445667644445679999988764334456777889999999876654
No 198
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=31.53 E-value=37 Score=26.92 Aligned_cols=114 Identities=12% Similarity=0.121 Sum_probs=62.8
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhh--HHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAAR--LKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCEN 84 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (489)
..+++++..+. =+.|++.+++.|.++|.+|+++ ...+.+. +.+..+.. ...+.+..+.. .... .
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~~~~~~~~el~~l---~~~~~~~~~~~-------~~~~-~ 83 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFEPMVILKEELEKA---VTRHIVEPVPL-------NPNQ-D 83 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEGGGCCSHHHHHTT---SSEEEEEEECC-------CTTS-C
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCHHHhhHHHHHHHH---HhheEEEEeec-------cccc-C
Confidence 45788887775 4899999999999999999998 6544332 33443321 11232222110 0000 0
Q ss_pred CCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCc-EEEECC--CCcchHHHHHHcCCCcEE
Q 042970 85 FDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPC-CIISDM--GYPWTVDTAAKFNVPRIV 144 (489)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D-~VI~D~--~~~~~~~~A~~lgIP~v~ 144 (489)
. ...... ..-...+.+.+++.. .+.| +.+|.+ +.-++..+++++|||..-
T Consensus 84 ~----~d~~~g----~~G~v~~~l~~~~~~--~~~~~vy~CGP~~Mm~av~~~l~~~~~~~~~ 136 (142)
T 3lyu_A 84 F----LANMKN----VSQRLKEKVRELLES--EDWDLVFMVGPVGDQKQVFEVVKEYGVPMLE 136 (142)
T ss_dssp H----HHHHHH----HHHHHHHHHHHHHHS--SCCSEEEEESCHHHHHHHHHHHHHHTCCBC-
T ss_pred C----CCCCCC----CccchhHHHHHhccc--CCCCEEEEECCHHHHHHHHHHHHHcCCchhh
Confidence 0 001100 001122345555555 4556 567888 334777889999999764
No 199
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=31.35 E-value=80 Score=27.75 Aligned_cols=39 Identities=23% Similarity=0.072 Sum_probs=25.4
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|..+++.. +++++.++ |-+ -..+++.|+++||+|+++.-
T Consensus 1 M~~m~~~k-~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 1 MAHMVNGK-VALVTGAA-QGI--GRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp -CCCCTTC-EEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcccCCC-EEEEECCC-CcH--HHHHHHHHHHCCCEEEEEEC
Confidence 66666544 44555443 322 35789999999999998754
No 200
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=31.30 E-value=60 Score=28.58 Aligned_cols=38 Identities=21% Similarity=0.094 Sum_probs=26.0
Q ss_pred CCCcEEEEecCCCc--cCHHHHHH-HHHHHHhCCCeEEEEe
Q 042970 5 ASEFHILLLPFLAQ--GHLIPMFD-MARLLANHRAIVTIVT 42 (489)
Q Consensus 5 ~~~~~vl~~~~p~~--GHv~P~l~-La~~L~~rGH~V~~~~ 42 (489)
+.++||+++....+ |...-++. +++.|.+.|++|.++-
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~id 72 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFD 72 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEE
Confidence 45678888876644 55555555 5566677799998874
No 201
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=31.29 E-value=66 Score=28.06 Aligned_cols=41 Identities=27% Similarity=0.209 Sum_probs=28.2
Q ss_pred CCCCCC-CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 1 MASEAS-EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 1 m~~~~~-~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|..++. +-|+++++.++.| + -.++|++|+++|++|.+....
T Consensus 1 M~~~~~l~gk~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 1 MSQFMNLEGKVALVTGASRG-I--GKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp -CCTTCCTTCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCCCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 565543 4467777776533 2 367899999999999887543
No 202
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=31.19 E-value=49 Score=27.02 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=28.2
Q ss_pred cEEEEecCC---CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFL---AQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p---~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
.+|+++|.= ..--.++.-.|++.|.++|.+|.|+.+|
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 467776621 1123568899999999999999999888
No 203
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=30.98 E-value=90 Score=28.56 Aligned_cols=33 Identities=9% Similarity=0.135 Sum_probs=19.7
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEEEe
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHR--AIVTIVT 42 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rG--H~V~~~~ 42 (489)
+.++|+++- +.|.+= ..|+++|.++| ++|+...
T Consensus 23 ~~~~vlVtG--atG~iG--~~l~~~L~~~g~~~~v~~~~ 57 (346)
T 4egb_A 23 NAMNILVTG--GAGFIG--SNFVHYMLQSYETYKIINFD 57 (346)
T ss_dssp -CEEEEEET--TTSHHH--HHHHHHHHHHCTTEEEEEEE
T ss_pred CCCeEEEEC--CccHHH--HHHHHHHHhhCCCcEEEEEe
Confidence 346665543 334443 47889999999 5555443
No 204
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=30.80 E-value=51 Score=29.26 Aligned_cols=40 Identities=15% Similarity=0.007 Sum_probs=30.8
Q ss_pred HHHHHHHhhcCCCCcEEEECCCCc------chHHHHHHcCCCcEEEec
Q 042970 106 LPFENLFSEQSPKPCCIISDMGYP------WTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~~~------~~~~~A~~lgIP~v~l~~ 147 (489)
..+.+++++ .+||+||+..-+. .+..+|+.||+|.++..+
T Consensus 106 ~~La~~i~~--~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 106 RVLAKLAEK--EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHH--HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 455566666 6899999876442 688999999999998654
No 205
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=30.71 E-value=41 Score=32.90 Aligned_cols=34 Identities=15% Similarity=0.231 Sum_probs=27.8
Q ss_pred HHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 042970 107 PFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVF 145 (489)
Q Consensus 107 ~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l 145 (489)
.+++++++ .+||++|.+.. ...+|+++|||++.+
T Consensus 366 ~le~~i~~--~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARA--GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 46677777 79999998854 577999999999974
No 206
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=30.68 E-value=49 Score=29.89 Aligned_cols=32 Identities=22% Similarity=0.156 Sum_probs=25.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
+++||.|+-.+..|. .+|+.|.+.||+|+++.
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 34 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFD 34 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEe
Confidence 467899998877775 46888999999998764
No 207
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=30.66 E-value=50 Score=27.05 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=28.3
Q ss_pred cEEEEecC-C--CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPF-L--AQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~-p--~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
.+|+++|. + ..--.++.-.|++.|.++|.+|.|+.+|
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 46777762 2 1123568899999999999999999888
No 208
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=30.57 E-value=33 Score=30.03 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=28.3
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+++||.|+-.|..|- .||+.|+++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 468999999998885 589999999999998755
No 209
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=30.53 E-value=2e+02 Score=25.01 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=23.6
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|+++++.++.| + -..+|++|+++|++|.++.-
T Consensus 12 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 12 KVVVISGVGPA-L--GTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp CEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeC
Confidence 56667666543 2 36789999999999988754
No 210
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=30.48 E-value=55 Score=29.96 Aligned_cols=34 Identities=9% Similarity=0.156 Sum_probs=25.9
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANH-R-AIVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~r-G-H~V~~~~~~ 44 (489)
|++++|+++..+.. ++|++.|++. | ++|.++...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 45789999866654 5799999886 7 888887554
No 211
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=30.44 E-value=81 Score=23.42 Aligned_cols=38 Identities=24% Similarity=0.272 Sum_probs=25.5
Q ss_pred HHHhhcCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecch
Q 042970 110 NLFSEQSPKPCCIISDMGYP--WTVDTAAKF-------NVPRIVFHGFS 149 (489)
Q Consensus 110 ~ll~~~~~~~D~VI~D~~~~--~~~~~A~~l-------gIP~v~l~~~~ 149 (489)
+.+++ .+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 40 ~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 40 EKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 34455 6899999998654 455555543 58888876543
No 212
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=29.92 E-value=17 Score=33.25 Aligned_cols=35 Identities=17% Similarity=0.090 Sum_probs=28.1
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+++.+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 5 ~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 5 TKVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcC
Confidence 345689999888655 78899999999999999553
No 213
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=29.74 E-value=36 Score=31.46 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=27.9
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
++||.|+-.|..| ..+|..|.++||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 6899999988877 4789999999999999864
No 214
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=29.67 E-value=23 Score=31.85 Aligned_cols=28 Identities=11% Similarity=0.215 Sum_probs=24.2
Q ss_pred CCccccccccChhhHHHHHHh------CCcEeecCC
Q 042970 358 PAVGGFLTHCGWNSSLEGISA------GVQMLTWPL 387 (489)
Q Consensus 358 ~~~~~~I~HgG~~s~~eal~~------GvP~l~~P~ 387 (489)
+++ +|.=||=||+.+++.. ++|++.+|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 455 9999999999999875 899999975
No 215
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=29.65 E-value=37 Score=31.93 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=26.6
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+++++|.|+-.+..| ..+|+.|+++||+|+++..
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 456899999887666 4679999999999998853
No 216
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=29.58 E-value=1.1e+02 Score=23.04 Aligned_cols=38 Identities=16% Similarity=0.095 Sum_probs=30.2
Q ss_pred CCCcEEEEecCCCccCHH-HHHHHHHHHHhCCCeEEEEe
Q 042970 5 ASEFHILLLPFLAQGHLI-PMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~-P~l~La~~L~~rGH~V~~~~ 42 (489)
.+++||+++|..+.|.-. =.-.|-+.+.++|.++.+-+
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 346789999999999877 46777788888999875544
No 217
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=29.56 E-value=44 Score=30.54 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=27.5
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
.++++|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 345899999887766 5689999999999998753
No 218
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=29.46 E-value=38 Score=29.55 Aligned_cols=21 Identities=19% Similarity=0.031 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCeEEEEeCC
Q 042970 24 MFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 24 ~l~La~~L~~rGH~V~~~~~~ 44 (489)
-.++|++|.++|++|++++.+
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 367899999999999999876
No 219
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=29.40 E-value=2.4e+02 Score=23.32 Aligned_cols=142 Identities=13% Similarity=0.122 Sum_probs=81.7
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHH---HhcCCCeEEecccchHhhhcC
Q 042970 281 SVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEE---RIKGRGLLIRGWVPQVMILSH 357 (489)
Q Consensus 281 ~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~v~~~~pq~~ll~~ 357 (489)
+.|-|-+||.. |-...++....|+..+..+-..+.+-+. .|+.+.+ .....+
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--------~p~~l~~~~~~a~~~g--------------- 76 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAHR--------TPDRLADYARTAAERG--------------- 76 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHHHHHHHTTTTT---------------
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC--------CHHHHHHHHHHHHhCC---------------
Confidence 34778888866 5666777888888888887666655432 3433221 111111
Q ss_pred CCccccccccC----hhhHHHHHHhCCcEeecCCcCc--chhhH-HHHHHH--hcceeE-ecccCCcccccccccccccc
Q 042970 358 PAVGGFLTHCG----WNSSLEGISAGVQMLTWPLFGD--QFCNE-KLIVEV--LRIGVS-VGVEVPLKFGEEEKIGVLVK 427 (489)
Q Consensus 358 ~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~D--Q~~na-~~v~e~--~g~G~~-l~~~~~~~~~~~~~~~~~~~ 427 (489)
.++ +|.=.| ..++..++ .-+|+|.+|.... ....+ .-+. + .|+.+. +... +....+
T Consensus 77 ~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~I~----------~a~~~n 142 (182)
T 1u11_A 77 LNV--IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIV-QMPGGVPVGTLAIG----------ASGAKN 142 (182)
T ss_dssp CCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSS----------HHHHHH
T ss_pred CcE--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCceEEEecC----------CccchH
Confidence 222 555444 33455444 5899999998542 22222 2233 4 555521 1110 001367
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhhC
Q 042970 428 KDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEEG 466 (489)
Q Consensus 428 ~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~g 466 (489)
+.-++..|. -+.|+ .++++.+..++..++.+.+.
T Consensus 143 AallAaqIl-a~~d~----~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 143 AALLAASIL-ALYNP----ALAARLETWRALQTASVPNS 176 (182)
T ss_dssp HHHHHHHHH-GGGCH----HHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHH-ccCCH----HHHHHHHHHHHHHHHHHHHh
Confidence 777776665 44667 89999999999888776553
No 220
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=29.20 E-value=48 Score=31.27 Aligned_cols=38 Identities=8% Similarity=0.026 Sum_probs=28.4
Q ss_pred CCcEEEEecCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeC
Q 042970 6 SEFHILLLPFLAQG-H---LIPMFDMARLL-ANHRAIVTIVTT 43 (489)
Q Consensus 6 ~~~~vl~~~~p~~G-H---v~P~l~La~~L-~~rGH~V~~~~~ 43 (489)
+++||+++..+..+ | +..-.+++++| .++||+|+.+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 47899999766444 2 33568888999 999999998854
No 221
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=29.19 E-value=69 Score=23.94 Aligned_cols=36 Identities=14% Similarity=0.102 Sum_probs=27.6
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
.+||+++|..+.|+-.=.-.+-+.+.++|.++.+-+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 478999999988888555567777778898766543
No 222
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=29.16 E-value=45 Score=30.00 Aligned_cols=34 Identities=21% Similarity=0.035 Sum_probs=26.9
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|+..+|.++-.+..| ..+|+.|+++||+|+++..
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 445689999777766 4688999999999999743
No 223
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=29.15 E-value=1.6e+02 Score=26.38 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=23.5
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
++++++.++. -+ -..+|++|+++|++|.++.-
T Consensus 32 k~vlVTGas~-gI--G~~la~~l~~~G~~V~~~~r 63 (301)
T 3tjr_A 32 RAAVVTGGAS-GI--GLATATEFARRGARLVLSDV 63 (301)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEEC
Confidence 5667766553 23 36789999999999988754
No 224
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=28.94 E-value=62 Score=27.91 Aligned_cols=42 Identities=19% Similarity=0.162 Sum_probs=23.1
Q ss_pred CCCCCCcEEEEec-CCCc----cCHHH-HH-HHHHHHHhCCCeEEEEeC
Q 042970 2 ASEASEFHILLLP-FLAQ----GHLIP-MF-DMARLLANHRAIVTIVTT 43 (489)
Q Consensus 2 ~~~~~~~~vl~~~-~p~~----GHv~P-~l-~La~~L~~rGH~V~~~~~ 43 (489)
.+..+++|||++. .|-. +-++- ++ .+++.|.+.||+|.+.-.
T Consensus 20 ~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 20 FQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp ----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred cccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 3445667788776 4432 23443 33 355566678999988753
No 225
>2lse_A Four helix bundle protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=35.04 E-value=12 Score=25.59 Aligned_cols=36 Identities=31% Similarity=0.405 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHcC
Q 042970 447 VRRKRAKEFEELAKRALEEGGSSYNNIQLFFQDIMQQ 483 (489)
Q Consensus 447 ~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 483 (489)
.-|++..+++.-.+..+++|.. .+-|+.|-.+|.++
T Consensus 26 earerieklakdvkdeleegda-knmiekfrdemeqm 61 (101)
T 2lse_A 26 EARERIEKLAKDVKDELEEGDA-KNMIEKFRDEMEQM 61 (101)
Confidence 5677888888777777666554 67777777777665
No 226
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=28.82 E-value=46 Score=24.62 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=23.7
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHR-AIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rG-H~V~~~~~~ 44 (489)
+++|+++-.+..| ..+++.|.++| |+|+++...
T Consensus 5 ~~~v~I~G~G~iG-----~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIG-----QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCceEEEEeCC
Confidence 4678877544333 46789999999 999887643
No 227
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=28.80 E-value=2.5e+02 Score=23.27 Aligned_cols=139 Identities=17% Similarity=0.158 Sum_probs=77.8
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHH---HhcCCCeEEecccchHhhhcC
Q 042970 281 SVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEE---RIKGRGLLIRGWVPQVMILSH 357 (489)
Q Consensus 281 ~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~v~~~~pq~~ll~~ 357 (489)
|.|-|-+||.. |-...++....|+..+.++-..+.+-.. .|+.+.+ .....+
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--------~p~~l~~~~~~a~~~g--------------- 68 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHR--------TPDRMFEYAKNAEERG--------------- 68 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--------CHHHHHHHHHHTTTTT---------------
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC--------CHHHHHHHHHHHHhCC---------------
Confidence 57888888876 5666777888888888887666554432 3332221 111111
Q ss_pred CCccccccccC----hhhHHHHHHhCCcEeecCCcCc--chhhH-HHHHHHh--cceeE-ecccCCcccccccccccccc
Q 042970 358 PAVGGFLTHCG----WNSSLEGISAGVQMLTWPLFGD--QFCNE-KLIVEVL--RIGVS-VGVEVPLKFGEEEKIGVLVK 427 (489)
Q Consensus 358 ~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~D--Q~~na-~~v~e~~--g~G~~-l~~~~~~~~~~~~~~~~~~~ 427 (489)
.++ +|.=.| ..++..++ .-+|+|.+|.... ....+ .-+. +. |+.+. +.. |...+
T Consensus 69 ~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~I------------d~~~n 132 (183)
T 1o4v_A 69 IEV--IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVATVAI------------NNAKN 132 (183)
T ss_dssp CCE--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCEECCT------------TCHHH
T ss_pred CcE--EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEec------------CCchH
Confidence 222 554444 33444444 6788999888542 22222 1232 44 53321 111 12467
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhh
Q 042970 428 KDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEE 465 (489)
Q Consensus 428 ~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 465 (489)
+.-++..|. -+.|+ .++++.+..+...++.+.+
T Consensus 133 Aa~lAaqIl-a~~d~----~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 133 AGILAASIL-GIKYP----EIARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHHHHH-HTTCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hcCCH----HHHHHHHHHHHHHHHHHHH
Confidence 777776665 34566 7777777777777666554
No 228
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=28.79 E-value=1.6e+02 Score=26.03 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=24.2
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+.|+++++.++.| =-.++|++|+++|++|.++.-
T Consensus 23 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 23 RPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp --CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4567777776643 235789999999999988754
No 229
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=28.73 E-value=51 Score=29.20 Aligned_cols=40 Identities=13% Similarity=-0.064 Sum_probs=30.6
Q ss_pred HHHHHHHhhcCCCCcEEEECCCCc------chHHHHHHcCCCcEEEec
Q 042970 106 LPFENLFSEQSPKPCCIISDMGYP------WTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~~~------~~~~~A~~lgIP~v~l~~ 147 (489)
..+.++++. .+||+||+..-+. .+..+|+.||+|.++..+
T Consensus 103 ~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 103 KILAAVARA--EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHH--HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 355556666 5899999876442 688999999999999654
No 230
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=28.66 E-value=2e+02 Score=24.92 Aligned_cols=40 Identities=20% Similarity=0.061 Sum_probs=25.4
Q ss_pred CCCCCC-CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEAS-EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~-~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|...+. +-|+++++.++ |-+ -..+|++|+++|++|+++.-
T Consensus 1 m~~~~~l~~k~vlVTGas-~gi--G~~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 1 MAGRWNLEGCTALVTGGS-RGI--GYGIVEELASLGASVYTCSR 41 (260)
T ss_dssp -CCTTCCTTCEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCccCCCCCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 554442 23556666554 322 35789999999999988754
No 231
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=28.64 E-value=32 Score=31.19 Aligned_cols=30 Identities=7% Similarity=0.065 Sum_probs=25.2
Q ss_pred cCCCccccccccChhhHHHHHHh----CCcEeecCC
Q 042970 356 SHPAVGGFLTHCGWNSSLEGISA----GVQMLTWPL 387 (489)
Q Consensus 356 ~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 387 (489)
..+++ +|.-||=||+.+++.. ++|++.++.
T Consensus 62 ~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 44677 9999999999999853 899999974
No 232
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=28.57 E-value=78 Score=26.22 Aligned_cols=85 Identities=14% Similarity=0.183 Sum_probs=56.4
Q ss_pred cCHHHHHHHHHHHHhC--CCeEEEEeCCcchhhHHH-HHHHhhhCCCceEEEEeeCCcccCCCCCCCCCCCCCCchhhHH
Q 042970 19 GHLIPMFDMARLLANH--RAIVTIVTTPVNAARLKT-VLARAVQSGLQIRLVEIQFPWQEAGLPQGCENFDMLPSIDLAS 95 (489)
Q Consensus 19 GHv~P~l~La~~L~~r--GH~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (489)
.+=.-++.+|+.|.+. ||++. ++......+++ . |+....+. ..+++
T Consensus 37 ~dK~~lv~~ak~~~~lL~Gf~L~--AT~gTa~~L~e~~---------Gl~v~~v~------k~~eG-------------- 85 (178)
T 1vmd_A 37 RRKRDLLEWVSFNLGTLSKHELY--ATGTTGALLQEKL---------GLKVHRLK------SGPLG-------------- 85 (178)
T ss_dssp GGHHHHHHHHHHSHHHHTTSEEE--ECHHHHHHHHHHH---------CCCCEECS------CGGGT--------------
T ss_pred hhHHHHHHHHHHHHHHhcCCEEE--EchHHHHHHHHHh---------CceeEEEe------ecCCC--------------
Confidence 4557789999999999 99654 56666666665 3 55544321 11111
Q ss_pred HHHHHHhhchHHHHHHHhhcCCCCcEEEECCC--Cc--------chHHHHHHcCCCcEE
Q 042970 96 KFFNSHSMLQLPFENLFSEQSPKPCCIISDMG--YP--------WTVDTAAKFNVPRIV 144 (489)
Q Consensus 96 ~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~--~~--------~~~~~A~~lgIP~v~ 144 (489)
-.+.+.++|++ .+.|+||.-+- .. .-..+|-..|||+++
T Consensus 86 --------G~pqI~d~I~~--geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 86 --------GDQQIGAMIAE--GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp --------HHHHHHHHHHT--TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred --------CCchHHHHHHC--CCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 12467788888 89999995332 22 246689999999997
No 233
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=28.53 E-value=60 Score=31.90 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=32.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEee
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQ 70 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 70 (489)
.+-+|++. .+=.-++.+|+.|.+.|.++. ++......+++. |+....+.
T Consensus 24 i~raLISV---~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~ 72 (534)
T 4ehi_A 24 AMRALLSV---SDKEGIVEFGKELENLGFEIL--STGGTFKLLKEN---------GIKVIEVS 72 (534)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEECB
T ss_pred CcEEEEEE---cccccHHHHHHHHHHCCCEEE--EccHHHHHHHHC---------CCceeehh
Confidence 33344444 455668999999999998875 456556666655 66665543
No 234
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=28.29 E-value=96 Score=25.58 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=26.1
Q ss_pred CCCCcEEEEecC-CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 4 EASEFHILLLPF-LAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 4 ~~~~~~vl~~~~-p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|.+..|++++-. ..+=. .=++.-...|++.|++|+++++.
T Consensus 4 m~~t~~~v~il~~~gFe~-~E~~~p~~~l~~ag~~V~~~s~~ 44 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQD-EEYFESKKIFESAGYKTKVSSTF 44 (177)
T ss_dssp -CCCCEEEEECCSEEECH-HHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEECCCCccH-HHHHHHHHHHHHCCCEEEEEECC
Confidence 334455555544 34333 34667778899999999999865
No 235
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=28.26 E-value=65 Score=29.04 Aligned_cols=40 Identities=23% Similarity=0.262 Sum_probs=23.9
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|.+...+++|+++- +.|.+ -..|+++|.++||+|+.+.-.
T Consensus 1 M~~~~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 1 MQRNTLKHRILITG--GAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp ------CCEEEEET--TTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCcccCCCeEEEEC--CCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 44444456776654 33433 247899999999999998643
No 236
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=28.19 E-value=68 Score=30.02 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=23.2
Q ss_pred CCCccccccc-cChhhHHHHHHhCCcEeecCCcC
Q 042970 357 HPAVGGFLTH-CGWNSSLEGISAGVQMLTWPLFG 389 (489)
Q Consensus 357 ~~~~~~~I~H-gG~~s~~eal~~GvP~l~~P~~~ 389 (489)
.|++ +|+| .++.+..-|-..|+|.+.+-...
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 6887 7776 66667777888999999875443
No 237
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=28.12 E-value=30 Score=26.87 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=24.1
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
..+|+++-.+..| ..+++.|.++|++|+++...
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 4568887654433 46789999999999987643
No 238
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=27.97 E-value=57 Score=27.25 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=28.2
Q ss_pred cEEEEecCC---CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFL---AQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p---~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
.+|+++|.= ..--.++.-.|++.|.++|.+|.|+.+|
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 467777632 1123568899999999999999999888
No 239
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=27.87 E-value=86 Score=26.28 Aligned_cols=44 Identities=7% Similarity=-0.027 Sum_probs=35.9
Q ss_pred CCCCCCCcEEEEecCC-CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 1 MASEASEFHILLLPFL-AQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p-~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|.....+-+|.+++.+ +.|-..-++.++..+..+|..|.++.+.
T Consensus 1 ~~~~~~~g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 1 MYRPKDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp -CCCTTCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCcCCCCCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4444455678888877 9999999999999999999999999755
No 240
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=27.60 E-value=1.1e+02 Score=23.81 Aligned_cols=47 Identities=9% Similarity=-0.104 Sum_probs=31.7
Q ss_pred hCCcEeecCCcCcchhhHHHHHHHhcceeEecccCCccccccccccccccHHHHHHHHHHhcc
Q 042970 378 AGVQMLTWPLFGDQFCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKDDVETAINILMD 440 (489)
Q Consensus 378 ~GvP~l~~P~~~DQ~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~il~ 440 (489)
..+|+|++--..| ....... -+.|+--.+.+ .++.++|..+|+.++.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~-~~~g~~~~l~k--------------P~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQA-IQDGAYDFIAK--------------PFAADRLVQSARRAEE 120 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHH-HHTTCCEEEES--------------SCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHH-HhcCCCeEEeC--------------CCCHHHHHHHHHHHHH
Confidence 4788888854433 3344444 26676555544 3899999999999985
No 241
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=27.55 E-value=23 Score=30.44 Aligned_cols=32 Identities=13% Similarity=0.247 Sum_probs=23.8
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|||+++-.+.. -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G~~-----G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETT-----AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHH-----HHHHHHHHHhCCCeEEEEECC
Confidence 46777765433 357899999999999998643
No 242
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=27.43 E-value=59 Score=27.26 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=28.3
Q ss_pred cEEEEecCC---CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFL---AQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p---~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
.+|+++|.= ..--.++.-.|++.|.++|.+|.|+.+|
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 467777632 1123578889999999999999999888
No 243
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=27.40 E-value=2e+02 Score=25.03 Aligned_cols=32 Identities=13% Similarity=0.007 Sum_probs=23.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
-|+++++.++.| + -.++|++|+++|++|.+..
T Consensus 8 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~ 39 (259)
T 3edm_A 8 NRTIVVAGAGRD-I--GRACAIRFAQEGANVVLTY 39 (259)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEc
Confidence 456777766543 2 3589999999999998874
No 244
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=27.38 E-value=72 Score=28.72 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=29.8
Q ss_pred CCCcEEEEecCCCccCHHHH--HHHHHHHHhCC-CeEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPM--FDMARLLANHR-AIVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~--l~La~~L~~rG-H~V~~~~~~ 44 (489)
.++.|||++ .+..+|-.+- -.|++.|.+.| .+|++...+
T Consensus 2 ~~~~kvLiv-~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLI-TGQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEE-ESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEE-cCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 368999999 4455886444 57888888888 999998764
No 245
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=27.32 E-value=46 Score=28.07 Aligned_cols=33 Identities=18% Similarity=0.112 Sum_probs=22.8
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|||+++- +.|.+= ..|+++|.++||+|+.++-.
T Consensus 1 MkvlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG--ATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEc--CCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 3555543 334442 57899999999999988654
No 246
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=27.30 E-value=22 Score=32.47 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=26.3
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANH-----R-AIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~r-----G-H~V~~~~~ 43 (489)
+|||.|+-.|..|. .+|..|.++ | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 47999998887774 568888888 9 99999864
No 247
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=27.20 E-value=3.2e+02 Score=23.98 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=22.9
Q ss_pred HHHHHHhhcCCCCcEEEECCCCcc----hHHHHHHcCCCcEEEe
Q 042970 107 PFENLFSEQSPKPCCIISDMGYPW----TVDTAAKFNVPRIVFH 146 (489)
Q Consensus 107 ~l~~ll~~~~~~~D~VI~D~~~~~----~~~~A~~lgIP~v~l~ 146 (489)
.+..++.. ++|.||..+.... ....+...|||+|.+.
T Consensus 53 ~i~~l~~~---~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 53 VLEQAIAK---NPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHHHH---CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHh---CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 34444444 8998887654432 3344566799999853
No 248
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=27.17 E-value=30 Score=32.53 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=26.0
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
||.|+-.|..|. .+|..|.++||+|+++...
T Consensus 17 kI~iIG~G~mG~-----~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGT-----ALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHH-----HHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHH-----HHHHHHHhCCCEEEEEECC
Confidence 899999887774 5789999999999998543
No 249
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=27.16 E-value=40 Score=32.77 Aligned_cols=36 Identities=11% Similarity=0.122 Sum_probs=27.7
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
|.+++...+|+++-.|.. -+..|..|+++|++|+++
T Consensus 5 ~~~~~~~~dvvVIGaG~~-----GL~aA~~La~~G~~V~vl 40 (453)
T 2bcg_G 5 QETIDTDYDVIVLGTGIT-----ECILSGLLSVDGKKVLHI 40 (453)
T ss_dssp --CCCCBCSEEEECCSHH-----HHHHHHHHHHTTCCEEEE
T ss_pred hhhccccCCEEEECcCHH-----HHHHHHHHHHCCCeEEEE
Confidence 444555678998887754 378899999999999999
No 250
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=27.09 E-value=60 Score=29.57 Aligned_cols=32 Identities=25% Similarity=0.079 Sum_probs=26.6
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+|||+++-.|+.|- .+|..|. +||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 47899998888774 5788898 99999999755
No 251
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=27.05 E-value=42 Score=31.48 Aligned_cols=32 Identities=13% Similarity=-0.112 Sum_probs=25.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
|++.+|+++-.+..| +.+|..|+++|++|+++
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~vi 40 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLH 40 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEE
Confidence 445789999877655 78899999999999998
No 252
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=26.92 E-value=41 Score=30.56 Aligned_cols=33 Identities=18% Similarity=0.162 Sum_probs=27.0
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
.++|.++-.|..|+ .+|..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 46799999888876 5788999999999988543
No 253
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=26.78 E-value=83 Score=23.90 Aligned_cols=38 Identities=5% Similarity=-0.027 Sum_probs=25.8
Q ss_pred CCcEEEEecCCCccCH--HHHHHHHHHHHhCCCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQGHL--IPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv--~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
++.=+++...| +|+. .-.+.+|..+.+.||+|.++-..
T Consensus 2 kk~~~vv~~~P-~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 2 KRIAFVFSTAP-HGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp CCEEEEECSCT-TTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred cEEEEEEcCCC-CCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 33334444444 4554 66788999999999999877554
No 254
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=26.69 E-value=1.6e+02 Score=25.58 Aligned_cols=33 Identities=9% Similarity=-0.110 Sum_probs=23.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
.|+++++.++.| + -.++|+.|+++|++|.++.-
T Consensus 7 ~k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY-I--GAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 356666655532 2 46899999999999988754
No 255
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=26.65 E-value=59 Score=29.69 Aligned_cols=37 Identities=16% Similarity=0.074 Sum_probs=24.8
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 4 EASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
.++.++|+++ |+.|.+= ..|++.|.++||+|+.+.-.
T Consensus 8 ~~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 8 LPEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp SCTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3445666655 3334442 56889999999999987643
No 256
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=26.40 E-value=1.9e+02 Score=25.42 Aligned_cols=34 Identities=15% Similarity=-0.112 Sum_probs=24.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
-|+++++.++.| =-.++|++|+++|++|.++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 356777766543 2357899999999999988733
No 257
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=26.39 E-value=3.5e+02 Score=24.13 Aligned_cols=40 Identities=8% Similarity=-0.025 Sum_probs=31.7
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCCc--chHHHHHHcCCCcEEEe
Q 042970 105 QLPFENLFSEQSPKPCCIISDMGYP--WTVDTAAKFNVPRIVFH 146 (489)
Q Consensus 105 ~~~l~~ll~~~~~~~D~VI~D~~~~--~~~~~A~~lgIP~v~l~ 146 (489)
...+.+.+++ .++.+|+++.... .+..+|+..|++.+.+.
T Consensus 217 l~~l~~~ik~--~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 217 LKEIQDFVKE--YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 3466777788 8999999998664 56778999999988753
No 258
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=26.32 E-value=1.3e+02 Score=24.73 Aligned_cols=39 Identities=8% Similarity=0.017 Sum_probs=30.6
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
++++||+++.++... ..-+......|...|++|.++++.
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 456899999887644 456677778899999999999865
No 259
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=26.27 E-value=2.3e+02 Score=24.90 Aligned_cols=32 Identities=19% Similarity=0.015 Sum_probs=23.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
-|+++++.++.| + -.++|++|+++|++|.++.
T Consensus 15 gk~~lVTGas~g-I--G~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 15 GRVAFITGAARG-Q--GRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp TCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEe
Confidence 367777766543 2 3678999999999999875
No 260
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=26.20 E-value=1.9e+02 Score=27.74 Aligned_cols=31 Identities=13% Similarity=0.040 Sum_probs=23.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
.+|+++.. | .-.+.+++++++.|++|+++.+
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~ 33 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKELGIKTVAVHS 33 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEE
T ss_pred ceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEec
Confidence 46777653 3 3466899999999999998854
No 261
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=26.18 E-value=27 Score=31.06 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=24.2
Q ss_pred CCCccccccccChhhHHHHHHh---CCcEeecC
Q 042970 357 HPAVGGFLTHCGWNSSLEGISA---GVQMLTWP 386 (489)
Q Consensus 357 ~~~~~~~I~HgG~~s~~eal~~---GvP~l~~P 386 (489)
.+++ +|+-||=||+++++.. ++|++.++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn 71 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFK 71 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEE
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEE
Confidence 4566 9999999999999887 88988886
No 262
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=26.13 E-value=2.5e+02 Score=24.52 Aligned_cols=33 Identities=24% Similarity=0.118 Sum_probs=24.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
-|+++++.++.| + -.++|++|+++|++|.+...
T Consensus 28 ~k~vlVTGas~g-I--G~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG-I--GRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 467777776543 2 45789999999999988754
No 263
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=25.94 E-value=2.8e+02 Score=22.94 Aligned_cols=84 Identities=15% Similarity=0.081 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChhhH
Q 042970 293 LTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWNSS 372 (489)
Q Consensus 293 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~s~ 372 (489)
..++.+.++.+..+..+.+++++..+.... ||.=+...+ .-=|+-+ | .+.+ .-+|..++
T Consensus 52 R~p~~l~~~~~~a~~~g~~ViIa~AG~aa~-------LpgvvA~~t-~~PVIgV---P-------~~~~---~l~G~dsL 110 (183)
T 1o4v_A 52 RTPDRMFEYAKNAEERGIEVIIAGAGGAAH-------LPGMVASIT-HLPVIGV---P-------VKTS---TLNGLDSL 110 (183)
T ss_dssp TCHHHHHHHHHHTTTTTCCEEEEEEESSCC-------HHHHHHHHC-SSCEEEE---E-------ECCT---TTTTHHHH
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEecCcccc-------cHHHHHhcc-CCCEEEe---e-------CCCC---CCCcHHHH
Confidence 568888888887777788888877665433 553222211 1112211 0 0111 45788888
Q ss_pred HHHHHh--CCcEeecCCcCcchhhHHHHH
Q 042970 373 LEGISA--GVQMLTWPLFGDQFCNEKLIV 399 (489)
Q Consensus 373 ~eal~~--GvP~l~~P~~~DQ~~na~~v~ 399 (489)
+..+.. |+|+-++ ..|-.+||+.++
T Consensus 111 lSivqmP~GvpVatV--~Id~~~nAa~lA 137 (183)
T 1o4v_A 111 FSIVQMPGGVPVATV--AINNAKNAGILA 137 (183)
T ss_dssp HHHHTCCTTCCCEEC--CTTCHHHHHHHH
T ss_pred HHHhcCCCCCeeEEE--ecCCchHHHHHH
Confidence 888888 9994433 567899999886
No 264
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=25.94 E-value=40 Score=31.59 Aligned_cols=38 Identities=5% Similarity=-0.116 Sum_probs=26.1
Q ss_pred CCCcEEEEecCCCcc-C---HHHHHHHHHHHHhCCCeEEEEe
Q 042970 5 ASEFHILLLPFLAQG-H---LIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 5 ~~~~~vl~~~~p~~G-H---v~P~l~La~~L~~rGH~V~~~~ 42 (489)
|+++||+++..|..+ | +..-.++.++|.+.||+|+.+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 567899888554322 3 2334568899999999998874
No 265
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=25.93 E-value=46 Score=29.74 Aligned_cols=32 Identities=19% Similarity=0.002 Sum_probs=25.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|||.++-.|..|. .+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCCEEEEEcC
Confidence 4788887776663 6899999999999998543
No 266
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=25.86 E-value=1.3e+02 Score=28.32 Aligned_cols=36 Identities=17% Similarity=0.065 Sum_probs=26.4
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecC
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVG 319 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~ 319 (489)
+++++.||.. .-.-+..+.++|++.|+++.+.+...
T Consensus 3 Ili~~~gt~G--hv~p~~~La~~L~~~Gh~V~v~~~~~ 38 (404)
T 3h4t_A 3 VLITGCGSRG--DTEPLVALAARLRELGADARMCLPPD 38 (404)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHTTCCEEEEECGG
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHCCCeEEEEeCHH
Confidence 6788888854 22335568899999999999887643
No 267
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=25.74 E-value=2.5e+02 Score=26.16 Aligned_cols=40 Identities=3% Similarity=-0.007 Sum_probs=32.6
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAA 48 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~ 48 (489)
-++++-.|+.|=..=++.++..+...|..|.|+..+....
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 3556667799999999999999999999999998775443
No 268
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=25.74 E-value=43 Score=31.09 Aligned_cols=39 Identities=5% Similarity=-0.011 Sum_probs=27.6
Q ss_pred CCcEEEEecCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQGHL----IPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv----~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+++||+++..+..+-. ..-..++++|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 4788888875432222 24567899999999999988543
No 269
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=25.70 E-value=63 Score=22.09 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=22.8
Q ss_pred cccccccHHHHHHHHHHhccCChhHHHHHHHHHHH
Q 042970 421 KIGVLVKKDDVETAINILMDDGEERDVRRKRAKEF 455 (489)
Q Consensus 421 ~~~~~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l 455 (489)
++....|+++|.+||..|..+. -+++..|+..
T Consensus 9 ~ryr~Yte~~L~~Ai~aVr~g~---mS~~~Aak~y 40 (70)
T 2cob_A 9 GRYRQYNSEILEEAISVVMSGK---MSVSKAQSIY 40 (70)
T ss_dssp SCSCCCCHHHHHHHHHHHHTTS---SCHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHcCC---ccHHHHHHHh
Confidence 3456899999999999998751 1555555543
No 270
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=25.65 E-value=50 Score=30.41 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=23.3
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+++++|+++- +.|-+ -..|++.|.++||+|+.+.-
T Consensus 25 ~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILITG--GAGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEEc--CccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 4456766653 33433 25788999999999998864
No 271
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=25.59 E-value=2.9e+02 Score=24.99 Aligned_cols=110 Identities=10% Similarity=0.070 Sum_probs=0.0
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCCCC
Q 042970 4 EASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQGCE 83 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (489)
..+++||+++.++. || -+-+|..+-.+-...+.+...-+|.+.+....+.. ++.++.+| .....
T Consensus 102 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~-----gIp~~~~~--------~~~~~ 165 (302)
T 3o1l_A 102 SAQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH-----DIPYYHVP--------VDPKD 165 (302)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT-----TCCEEECC--------CCSSC
T ss_pred cCCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc-----CCCEEEcC--------CCcCC
Q ss_pred CCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCCc-chHHHHHHcCCCcEEEecc
Q 042970 84 NFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGYP-WTVDTAAKFNVPRIVFHGF 148 (489)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~~-~~~~~A~~lgIP~v~l~~~ 148 (489)
... ..+.+.+++++ .++|+||.-.+.- -...+-+.+.-.++-++++
T Consensus 166 r~~-----------------~~~~~~~~l~~--~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 166 KEP-----------------AFAEVSRLVGH--HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp CHH-----------------HHHHHHHHHHH--TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred HHH-----------------HHHHHHHHHHH--hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
No 272
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=25.59 E-value=30 Score=31.75 Aligned_cols=31 Identities=16% Similarity=0.096 Sum_probs=24.2
Q ss_pred hcCCCccccccccChhhHHHHHHh----CCcEeecCC
Q 042970 355 LSHPAVGGFLTHCGWNSSLEGISA----GVQMLTWPL 387 (489)
Q Consensus 355 l~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 387 (489)
...+++ +|.-||=||+.+++.. ++|++.++.
T Consensus 73 ~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 345666 9999999999999754 899999874
No 273
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=25.56 E-value=63 Score=24.65 Aligned_cols=38 Identities=11% Similarity=-0.110 Sum_probs=26.2
Q ss_pred CcEEEEecCCCccCH--HHHHHHHHHHHhCC--CeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHL--IPMFDMARLLANHR--AIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv--~P~l~La~~L~~rG--H~V~~~~~~ 44 (489)
.+|++|+-+...-.. +-.+.+|...+++| |+|.++...
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 466777665532222 34678899999999 899988655
No 274
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=25.56 E-value=1.3e+02 Score=28.06 Aligned_cols=36 Identities=11% Similarity=0.105 Sum_probs=25.5
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEec
Q 042970 281 SVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRV 318 (489)
Q Consensus 281 ~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~ 318 (489)
.++++++|+... -.....++++|.+.|+++.+.+..
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcCH
Confidence 477888775432 233556888999999999888753
No 275
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=25.48 E-value=70 Score=27.96 Aligned_cols=39 Identities=15% Similarity=0.020 Sum_probs=26.0
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|...++..+ ++++.++ |-+ -..+++.|.++|++|+++.-
T Consensus 1 m~~~~~~k~-vlITGas-ggi--G~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 1 MQNRLRSAL-ALVTGAG-SGI--GRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp CCCCCTTCE-EEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CccccCCCE-EEEECCC-ChH--HHHHHHHHHHCCCEEEEEeC
Confidence 666665544 4454443 322 35789999999999998754
No 276
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=25.19 E-value=71 Score=27.84 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=28.6
Q ss_pred EEEEec--CCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 9 HILLLP--FLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 9 ~vl~~~--~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+++.+. -++.|-..=.+.||..|+++|+.|.++=.
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~ 39 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDF 39 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEEC
Confidence 445543 45889999999999999999999999843
No 277
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=25.14 E-value=36 Score=31.94 Aligned_cols=39 Identities=8% Similarity=0.036 Sum_probs=27.3
Q ss_pred CCcEEEEecCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQGHL----IPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv----~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+++||+++..+..+-. .....++++|.++||+|+.+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 4688988886533322 23477889999999999988643
No 278
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=25.03 E-value=79 Score=23.67 Aligned_cols=38 Identities=8% Similarity=-0.005 Sum_probs=29.4
Q ss_pred CcEEEEecCCCccCHHHHH-HHHHHHHhCCCe-EEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMF-DMARLLANHRAI-VTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l-~La~~L~~rGH~-V~~~~~~ 44 (489)
++||+++|..+.|+-.=+- .|=+.+.++|.+ +.+-+..
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~ 57 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCS 57 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEee
Confidence 5789999999988887666 677788889988 6654433
No 279
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=25.01 E-value=37 Score=32.38 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=27.3
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEE
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANH-RAIVTIV 41 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~r-GH~V~~~ 41 (489)
|..|++..+|+++-.|.. -+..|..|+++ |++|+++
T Consensus 1 m~~m~~~~~v~IiGaG~~-----Gl~aA~~L~~~~g~~v~v~ 37 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFF-----GLTIAERVATQLDKRVLVL 37 (399)
T ss_dssp ---CCCSCSEEEECCSHH-----HHHHHHHHHHHSCCCEEEE
T ss_pred CCcccccCCEEEECCCHH-----HHHHHHHHHHhCCCCEEEE
Confidence 556656788999987753 47889999998 9999998
No 280
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=24.99 E-value=2.9e+02 Score=24.57 Aligned_cols=33 Identities=18% Similarity=0.071 Sum_probs=24.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
-|+++++.++.| =-.++|++|+++|++|.++..
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 367777766543 236789999999999998753
No 281
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=24.91 E-value=96 Score=25.95 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=36.6
Q ss_pred cEE-EEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc---chhhHHHHHHHhhhCCCceEEEEee
Q 042970 8 FHI-LLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPV---NAARLKTVLARAVQSGLQIRLVEIQ 70 (489)
Q Consensus 8 ~~v-l~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~ 70 (489)
.|| +|+..+...+-.....+++.|++.|+.|.++.... +.+ ++...+... .+.+-.+..+|
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~n-~~~~s~~~~~~ 171 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAAN-SSDSCHLVSIP 171 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHHC-STTCCEEEEEC
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhcc-CCCceEEEEec
Confidence 344 55555555677788899999999999998774322 223 444433322 22345566655
No 282
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=24.87 E-value=83 Score=28.03 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=31.0
Q ss_pred CCcEEEEecC--CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 6 SEFHILLLPF--LAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 6 ~~~~vl~~~~--p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+++++++++. |+.|-..=...||..|+++|..|.++-.
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~ 119 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDG 119 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 3456666654 5889999999999999999999999843
No 283
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=24.78 E-value=1e+02 Score=26.57 Aligned_cols=39 Identities=15% Similarity=0.019 Sum_probs=23.0
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|+.+.+.+ +++++.++ |-+ -..+++.|.++|++|+++.-
T Consensus 1 M~~~~~~k-~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 1 MAASGEAR-RVLVYGGR-GAL--GSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp -----CCC-EEEEETTT-SHH--HHHHHHHHHTTTCEEEEEES
T ss_pred CCccCCCC-EEEEECCC-cHH--HHHHHHHHHhCCCEEEEEeC
Confidence 55554444 45555444 322 35789999999999988754
No 284
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=24.69 E-value=75 Score=24.92 Aligned_cols=37 Identities=16% Similarity=0.208 Sum_probs=25.6
Q ss_pred cEEEEecCCCccCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFD-MARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~-La~~L~~rGH~V~~~~~~ 44 (489)
+||+++-....|+..-+.. +++.|.++|++|.++...
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 4566666666788765544 566777789999887544
No 285
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=24.66 E-value=46 Score=31.23 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=28.1
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
++||.++-.|..|. .+|..|+++||+|++....
T Consensus 29 ~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 57899999988774 6899999999999998654
No 286
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=24.64 E-value=1.3e+02 Score=22.84 Aligned_cols=39 Identities=5% Similarity=0.094 Sum_probs=25.3
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|...+++++|+++- .+-.-.-.|.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (142)
T 3cg4_A 1 MSLAEHKGDVMIVD----DDAHVRIAVKTILSDAGFHIISADS 39 (142)
T ss_dssp -----CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeCC
Confidence 56566788898885 4555666788888888998876543
No 287
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=24.64 E-value=54 Score=27.88 Aligned_cols=33 Identities=12% Similarity=0.013 Sum_probs=25.6
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
..++|.++-.+..| ..+|+.|.++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 35789999877666 5678999999999998854
No 288
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=24.59 E-value=56 Score=27.68 Aligned_cols=33 Identities=18% Similarity=0.051 Sum_probs=22.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|||+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 355544 3334443 57899999999999998644
No 289
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=24.57 E-value=1.2e+02 Score=22.98 Aligned_cols=37 Identities=14% Similarity=0.210 Sum_probs=24.5
Q ss_pred HHhhcCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecch
Q 042970 111 LFSEQSPKPCCIISDMGYP--WTVDTAAKF-------NVPRIVFHGFS 149 (489)
Q Consensus 111 ll~~~~~~~D~VI~D~~~~--~~~~~A~~l-------gIP~v~l~~~~ 149 (489)
.+++ .+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 43 ~~~~--~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 43 QIYK--NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHh--CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 4455 6899999998654 354444432 58888876644
No 290
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=24.52 E-value=75 Score=25.80 Aligned_cols=27 Identities=22% Similarity=0.170 Sum_probs=21.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhC
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEAS 308 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~ 308 (489)
.+|+++||..+.....+...+.+|.+.
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 589999998875566677788888765
No 291
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=24.45 E-value=1e+02 Score=25.02 Aligned_cols=27 Identities=26% Similarity=0.265 Sum_probs=22.7
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhC
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEAS 308 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~ 308 (489)
.+|+++||..+...+.+...+..|.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 29 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHL 29 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTC
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcC
Confidence 489999999877777888888888875
No 292
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=24.41 E-value=57 Score=26.72 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=28.9
Q ss_pred cEEEEecCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 042970 8 FHILLLPFL---AQGHLIPMFDMARLLANHRAIVTIVTTPV 45 (489)
Q Consensus 8 ~~vl~~~~p---~~GHv~P~l~La~~L~~rGH~V~~~~~~~ 45 (489)
.+|+++|.= ..-=..+.-.|++.|.++|.+|.|+.+|.
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 567777632 11235688999999999999999998873
No 293
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=24.33 E-value=58 Score=29.44 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=26.7
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
++||.|+-.+..|. .+|+.|.++||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 46899998887774 678999999999998843
No 294
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.25 E-value=59 Score=29.73 Aligned_cols=34 Identities=24% Similarity=0.112 Sum_probs=22.7
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
++++|+++- +.|-+= ..|++.|.++||+|+.+.-
T Consensus 4 ~~~~vlVTG--atG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 4 TKGTILVTG--GAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SSCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCcEEEEec--CCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 345555543 224332 5789999999999998853
No 295
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=24.22 E-value=68 Score=29.11 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=25.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
.||-|+-.+..|. ++|+.|.++||+|+++.
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 3799999998884 68999999999999863
No 296
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=24.13 E-value=30 Score=31.71 Aligned_cols=38 Identities=8% Similarity=-0.045 Sum_probs=27.3
Q ss_pred CCCC-CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASE-ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~-~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|..+ +++.+|+++-.+..| +.+|..|+++||+|+++-.
T Consensus 1 M~~~~~~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 1 MNGLETHNTRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp ---CEEEEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCCCCCCCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 4444 345688888877555 7889999999999999853
No 297
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=24.11 E-value=2.8e+02 Score=24.37 Aligned_cols=32 Identities=22% Similarity=0.050 Sum_probs=24.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
-|+++++.++.| + -.++|++|+++|++|+++.
T Consensus 11 ~k~~lVTGas~g-I--G~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 11 GKVAFVTGAARG-Q--GRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp TCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEe
Confidence 367777766643 2 4688999999999998874
No 298
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=24.08 E-value=4.8e+02 Score=24.93 Aligned_cols=137 Identities=13% Similarity=0.114 Sum_probs=76.8
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHH---HHhcCCCeEEecccchHhhhc
Q 042970 280 SSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFE---ERIKGRGLLIRGWVPQVMILS 356 (489)
Q Consensus 280 ~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~v~~~~pq~~ll~ 356 (489)
.+.|-|-+||.+ +-....++...|+..|..+-..+.+-+. .|+.+. ......+.
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~saHR--------~p~~~~~~~~~~~~~g~------------- 321 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSAHK--------GPDETLRIKAEYEGDGI------------- 321 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHHHHHHHHHTTCC-------------
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeeccC--------CHHHHHHHHHHHHHCCC-------------
Confidence 356878888866 5566777888888888887666554432 333221 11111111
Q ss_pred CCCccccccccC----hhhHHHHHHhCCcEeecCCcCcchhhH--HH--HHHH--hcceeEecccCCccccccccccccc
Q 042970 357 HPAVGGFLTHCG----WNSSLEGISAGVQMLTWPLFGDQFCNE--KL--IVEV--LRIGVSVGVEVPLKFGEEEKIGVLV 426 (489)
Q Consensus 357 ~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na--~~--v~e~--~g~G~~l~~~~~~~~~~~~~~~~~~ 426 (489)
..+ +|.=+| ..++..++ .-+|+|.+|... .+|+ .. +. + .|+.+..-.. ..
T Consensus 322 -~~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~--~~~G~daLls~v-qmp~g~pvatv~~-------------~~ 381 (425)
T 2h31_A 322 -PTV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLT--PDWGVQDVWSSL-RLPSGLGCSTVLS-------------PE 381 (425)
T ss_dssp -CEE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCC--TTTHHHHGGGTS-SCCSSCCCEECCC-------------HH
T ss_pred -CeE--EEEEcCcccchHhHHhcc-CCCCEEEeeCcc--ccccHHHHHHHh-cCCCCCceEEecC-------------ch
Confidence 012 454444 33555554 589999999852 2222 11 21 3 3444222112 35
Q ss_pred cHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHh
Q 042970 427 KKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALE 464 (489)
Q Consensus 427 ~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~ 464 (489)
++.-++..|. -+.|+ .++++.+..+...+..+.
T Consensus 382 nAa~~A~~Il-~~~~~----~l~~kl~~~~~~~~~~v~ 414 (425)
T 2h31_A 382 GSAQFAAQIF-GLSNH----LVWSKLRASILNTWISLK 414 (425)
T ss_dssp HHHHHHHHHH-HTTCH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-ccCCH----HHHHHHHHHHHHHHHHHH
Confidence 6777776665 44666 777777777777665533
No 299
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=24.05 E-value=79 Score=30.11 Aligned_cols=37 Identities=5% Similarity=-0.212 Sum_probs=27.3
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
|..||++++|+++..+ .--..+++++++.|++|.++.
T Consensus 18 ~~~mm~~~~I~ilGgG-----~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 18 QGHMWNSRKVGVLGGG-----QLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp ---CCSCCEEEEECCS-----HHHHHHHHHHHHHTCEEEEEE
T ss_pred eccCCCCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEE
Confidence 4556778899998866 245678888888999999887
No 300
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=24.02 E-value=99 Score=28.51 Aligned_cols=47 Identities=11% Similarity=0.036 Sum_probs=37.0
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHH
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTV 53 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~ 53 (489)
..-|++.+.|..+|..|...++....++|-+|.........+...+.
T Consensus 82 ~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL 128 (325)
T 3ing_A 82 AADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDI 128 (325)
T ss_dssp CCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHH
T ss_pred CCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHH
Confidence 46789999998899999999999999999999987654443333333
No 301
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=23.92 E-value=56 Score=29.45 Aligned_cols=33 Identities=9% Similarity=0.180 Sum_probs=27.2
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+.+|+++-.+..| +..|..|+++||+|+++-..
T Consensus 15 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred ccCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 3689999888766 78899999999999998643
No 302
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=23.91 E-value=1.2e+02 Score=22.79 Aligned_cols=39 Identities=10% Similarity=0.002 Sum_probs=25.1
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|+.+.++.+|+++- .+-.-.-.|.+.|.+.|++|..+..
T Consensus 1 Ms~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (136)
T 3hdv_A 1 MSLVAARPLVLVVD----DNAVNREALILYLKSRGIDAVGADG 39 (136)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CCCCCCCCeEEEEC----CCHHHHHHHHHHHHHcCceEEEeCC
Confidence 66666688999886 4555566778888888999987644
No 303
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=23.75 E-value=91 Score=24.15 Aligned_cols=33 Identities=9% Similarity=0.038 Sum_probs=23.6
Q ss_pred CcEEEEecCCCccCHH--------HHHHHHHHHHhCCCeEE
Q 042970 7 EFHILLLPFLAQGHLI--------PMFDMARLLANHRAIVT 39 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~--------P~l~La~~L~~rGH~V~ 39 (489)
.|+.++++.|-.|... -+-..|..|.++||.+.
T Consensus 7 ~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 7 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 3567899999878732 34456777889999655
No 304
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=23.69 E-value=3e+02 Score=22.52 Aligned_cols=143 Identities=15% Similarity=0.118 Sum_probs=78.5
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHH---HHhcCCCeEEecccchHhhh
Q 042970 279 PSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFE---ERIKGRGLLIRGWVPQVMIL 355 (489)
Q Consensus 279 ~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~v~~~~pq~~ll 355 (489)
+.|.|-|-+||.. |-...++....|+..+..+-..+-+-+. .|+.+. +.....++
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--------~p~~l~~~~~~a~~~g~------------ 68 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHR--------MPDEMFDYAEKARERGL------------ 68 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHHHHHHHTTTTC------------
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcccc--------CHHHHHHHHHHHHhcCC------------
Confidence 3456888899976 5566777888888888887666554443 333222 11111221
Q ss_pred cCCCccccccccC----hhhHHHHHHhCCcEeecCCcCcc---hhhHHHHHHHh--cceeEec-ccCCcccccccccccc
Q 042970 356 SHPAVGGFLTHCG----WNSSLEGISAGVQMLTWPLFGDQ---FCNEKLIVEVL--RIGVSVG-VEVPLKFGEEEKIGVL 425 (489)
Q Consensus 356 ~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ---~~na~~v~e~~--g~G~~l~-~~~~~~~~~~~~~~~~ 425 (489)
++ +|.=.| ..++..+ ..-+|+|.+|..... ..--.-+. +. |+.+..- .. ++..
T Consensus 69 ---~V--iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSiv-qMP~Gvpvatv~i~----------~~~a 131 (173)
T 4grd_A 69 ---RA--IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIV-QMPKGVPVATFAIG----------EAGA 131 (173)
T ss_dssp ---SE--EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECCSS----------HHHH
T ss_pred ---eE--EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHH-hCCCCCCceEEecC----------Ccch
Confidence 22 444333 2344444 468999999975432 11112222 22 3332110 10 0113
Q ss_pred ccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhh
Q 042970 426 VKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEE 465 (489)
Q Consensus 426 ~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 465 (489)
.++.-++..|- -+.|+ .++++.++.+++.++.+.+
T Consensus 132 ~NAallA~~IL-a~~d~----~l~~kl~~~r~~~~~~v~~ 166 (173)
T 4grd_A 132 ANAALFAVSIL-SGNSV----DYANRLAAFRVRQNEAAHA 166 (173)
T ss_dssp HHHHHHHHHHH-TTSCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCCH----HHHHHHHHHHHHHHHHHHc
Confidence 45555555553 34666 8999999988888776543
No 305
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=23.68 E-value=1.1e+02 Score=26.57 Aligned_cols=41 Identities=12% Similarity=-0.015 Sum_probs=29.0
Q ss_pred HHHHHHHhhcCCCCcEEEECCCCc-------chHHHHHHcCCCcEEEe
Q 042970 106 LPFENLFSEQSPKPCCIISDMGYP-------WTVDTAAKFNVPRIVFH 146 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~~~-------~~~~~A~~lgIP~v~l~ 146 (489)
+.+.++++.+..+||+|++|.... -|..+.-.+|+|+|.+.
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 445555565557899999998653 24556777889999863
No 306
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=23.68 E-value=79 Score=25.66 Aligned_cols=27 Identities=22% Similarity=0.170 Sum_probs=20.6
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhC
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEAS 308 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~ 308 (489)
+.|+++||..+...+.+...+..|.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 579999998865556677777888764
No 307
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=23.51 E-value=62 Score=28.27 Aligned_cols=35 Identities=31% Similarity=0.165 Sum_probs=26.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
...++|.|+-.+..| ..+|+.|+++||+|++....
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 346899999777666 35799999999999988644
No 308
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=23.49 E-value=55 Score=30.95 Aligned_cols=32 Identities=22% Similarity=0.123 Sum_probs=25.9
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
++++|+++-.|.. -+..|..|+++||+|+++=
T Consensus 2 ~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E 33 (384)
T 2bi7_A 2 KSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIID 33 (384)
T ss_dssp CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEE
T ss_pred CcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEE
Confidence 4578998877743 4778999999999999984
No 309
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=23.32 E-value=2.8e+02 Score=23.97 Aligned_cols=31 Identities=16% Similarity=-0.060 Sum_probs=22.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
-|+++++.++. -+ -..+|++|+++|++|++.
T Consensus 4 ~k~vlVTGas~-gI--G~aia~~l~~~G~~vv~~ 34 (258)
T 3oid_A 4 NKCALVTGSSR-GV--GKAAAIRLAENGYNIVIN 34 (258)
T ss_dssp CCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEecCCc-hH--HHHHHHHHHHCCCEEEEE
Confidence 45677776653 23 357899999999999986
No 310
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=23.29 E-value=1.1e+02 Score=27.68 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=26.6
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 4 EASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
+|+.|+|+++... .....+.+.|.+.||+|.+..
T Consensus 4 ~~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 4 MLTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred cccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 5778899888543 356677899999999998763
No 311
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=23.18 E-value=3.1e+02 Score=23.44 Aligned_cols=33 Identities=18% Similarity=0.074 Sum_probs=23.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
.|+++++.++.| + -..+|++|+++|++|++...
T Consensus 4 ~k~~lVTGas~g-I--G~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 4 TKSALVTGASRG-I--GRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp SCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeC
Confidence 356777766532 2 35789999999999988754
No 312
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=23.13 E-value=78 Score=23.75 Aligned_cols=39 Identities=10% Similarity=-0.061 Sum_probs=21.8
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 4 EASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
..+++||+++|..+.+--.=.-.+=++..++|.+|.+.+
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 356889999998875433322222233334577776654
No 313
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=23.04 E-value=51 Score=31.28 Aligned_cols=41 Identities=7% Similarity=-0.024 Sum_probs=29.9
Q ss_pred CCCCcEEEEecCCCccCHHHHH----HHHHHHHhCCCeEEEEeCC
Q 042970 4 EASEFHILLLPFLAQGHLIPMF----DMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l----~La~~L~~rGH~V~~~~~~ 44 (489)
+|+++||+++..|..+=-.-.+ .++++|.+.||+|+.+...
T Consensus 19 ~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 19 HMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp --CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 4778999999887555544444 7888888889999988644
No 314
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=22.95 E-value=65 Score=30.44 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=26.5
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
+++.+|+++-.+-.| +.+|..|+++|++|+++
T Consensus 3 ~~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~ 34 (397)
T 2vou_A 3 PTTDRIAVVGGSISG-----LTAALMLRDAGVDVDVY 34 (397)
T ss_dssp CCCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEE
Confidence 346789999877544 78999999999999998
No 315
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=22.94 E-value=1e+02 Score=25.94 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=28.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
..++++..+..|+-.-+..+++.|.++|+.|...-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456666667778888899999999999999887754
No 316
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=22.92 E-value=1.2e+02 Score=27.92 Aligned_cols=29 Identities=14% Similarity=0.063 Sum_probs=23.7
Q ss_pred CCccccccccChhhHHHHHH------hCCcEeecCCc
Q 042970 358 PAVGGFLTHCGWNSSLEGIS------AGVQMLTWPLF 388 (489)
Q Consensus 358 ~~~~~~I~HgG~~s~~eal~------~GvP~l~~P~~ 388 (489)
.++ +|.-||=||+.|++. .++|+.++|..
T Consensus 81 ~d~--vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 81 YDV--LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp CSE--EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CCE--EEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 455 999999999999863 46899999974
No 317
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=22.92 E-value=41 Score=33.32 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=27.2
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
|...+++.+|+++-.+..| +.+|..|+++|++|+++=
T Consensus 1 M~~~~~~~dVvIVGgG~aG-----l~aA~~La~~G~~V~liE 37 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGG-----STLASFVAMRGHRVLLLE 37 (512)
T ss_dssp ----CEEEEEEEECCSHHH-----HHHHHHHHTTTCCEEEEC
T ss_pred CCCCCccCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEc
Confidence 5434445789999888655 788889999999999993
No 318
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=22.86 E-value=32 Score=29.63 Aligned_cols=33 Identities=15% Similarity=0.043 Sum_probs=26.2
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
|+++||.|+-.|..| ..+|+.|.++||+|+++.
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~ 53 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIAN 53 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEE
Confidence 446789999877666 468899999999999853
No 319
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=22.86 E-value=2e+02 Score=25.63 Aligned_cols=34 Identities=24% Similarity=0.006 Sum_probs=24.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
-|+++++.++.| + -..+|++|+++|++|.+....
T Consensus 49 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDSG-I--GRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 367777766533 2 368899999999999887543
No 320
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=22.80 E-value=3.2e+02 Score=22.52 Aligned_cols=145 Identities=15% Similarity=0.098 Sum_probs=80.6
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHH---HHhcCCCeEEecccchHhhhc
Q 042970 280 SSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFE---ERIKGRGLLIRGWVPQVMILS 356 (489)
Q Consensus 280 ~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~v~~~~pq~~ll~ 356 (489)
+|.|-|-+||.. |-...++....|+..+..+-..+.+... .|+.+. +.....++.
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR--------tp~~l~~~~~~a~~~g~~------------ 79 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--------TPDYMFEYAETARERGLK------------ 79 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHHHHHHTTTTTCC------------
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc--------ChHHHHHHHHHHHhcCce------------
Confidence 457888999977 5566778888999999888776655443 333222 222222221
Q ss_pred CCCccccccccC----hhhHHHHHHhCCcEeecCCcCcc---hhhHHHHHHHhcceeEecccCCccccccccccccccHH
Q 042970 357 HPAVGGFLTHCG----WNSSLEGISAGVQMLTWPLFGDQ---FCNEKLIVEVLRIGVSVGVEVPLKFGEEEKIGVLVKKD 429 (489)
Q Consensus 357 ~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ---~~na~~v~e~~g~G~~l~~~~~~~~~~~~~~~~~~~~~ 429 (489)
+ +|.=.| ..++..+ ..-+|+|.+|..... ...-.-++ +.=-|+-+-.-. - .+++..|+.
T Consensus 80 ---V--iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTva---i----g~~ga~NAa 145 (181)
T 4b4k_A 80 ---V--IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVA---I----GKAGSTNAG 145 (181)
T ss_dssp ---E--EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECC---S----SHHHHHHHH
T ss_pred ---E--EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEe---c----CCccHHHHH
Confidence 1 444444 2344434 467899999986532 22233333 433343332110 0 000124455
Q ss_pred HHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhh
Q 042970 430 DVETAINILMDDGEERDVRRKRAKEFEELAKRALEE 465 (489)
Q Consensus 430 ~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 465 (489)
-++..|-. +.|+ .++++.+..++.+++.+++
T Consensus 146 llA~qILa-~~d~----~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 146 LLAAQILG-SFHD----DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHT-TTCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHc-cCCH----HHHHHHHHHHHHHHHHHHH
Confidence 55554433 4566 8888888888888877655
No 321
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=22.77 E-value=36 Score=30.19 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=24.9
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCe-EEEEe
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAI-VTIVT 42 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~-V~~~~ 42 (489)
|....++++|.++-.|..|. .+|+.|.+.||+ |+++.
T Consensus 4 m~~~~~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~v~~~~ 41 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLAT-----NLAKALYRKGFRIVQVYS 41 (266)
T ss_dssp ---CGGGCCEEEECCSHHHH-----HHHHHHHHHTCCEEEEEC
T ss_pred hhcCCCCCeEEEEcCCHHHH-----HHHHHHHHCCCeEEEEEe
Confidence 44444468999998776663 468888888999 66654
No 322
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=22.71 E-value=1.1e+02 Score=26.51 Aligned_cols=69 Identities=10% Similarity=0.128 Sum_probs=0.0
Q ss_pred CCCccccccccChhhHHHHHHhCCcEeecCC-----------------------cCcchhhHHHHHHHhcceeEecccCC
Q 042970 357 HPAVGGFLTHCGWNSSLEGISAGVQMLTWPL-----------------------FGDQFCNEKLIVEVLRIGVSVGVEVP 413 (489)
Q Consensus 357 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-----------------------~~DQ~~na~~v~e~~g~G~~l~~~~~ 413 (489)
.+++ +|+.||-....... .++|+|-++. +.+....+..+.+-+|+-+....-
T Consensus 63 ~~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~-- 137 (225)
T 2pju_A 63 RCDA--IIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSY-- 137 (225)
T ss_dssp CCSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEE--
T ss_pred CCeE--EEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEe--
Q ss_pred ccccccccccccccHHHHHHHHHHhccCC
Q 042970 414 LKFGEEEKIGVLVKKDDVETAINILMDDG 442 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~~~l~~ai~~il~~~ 442 (489)
-+++++...|.++..++
T Consensus 138 ------------~~~ee~~~~i~~l~~~G 154 (225)
T 2pju_A 138 ------------ITEEDARGQINELKANG 154 (225)
T ss_dssp ------------SSHHHHHHHHHHHHHTT
T ss_pred ------------CCHHHHHHHHHHHHHCC
No 323
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=22.66 E-value=74 Score=28.63 Aligned_cols=37 Identities=5% Similarity=-0.139 Sum_probs=27.5
Q ss_pred cEEEEecCCCccC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGH---LIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GH---v~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5899998774221 234467999999999999998653
No 324
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=22.64 E-value=1e+02 Score=25.90 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=27.2
Q ss_pred CCcEEEEecCCCccCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQGHLIPMFD-MARLLANHRAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~-La~~L~~rGH~V~~~~~~ 44 (489)
+++||+++-....|+..-+.. +++.|.+.|++|.++...
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 456888887666787766654 455666689998887543
No 325
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=22.49 E-value=94 Score=28.05 Aligned_cols=35 Identities=6% Similarity=-0.120 Sum_probs=29.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
..|+|+.-|+.|=..=.+.||..|+++|+.|.++=
T Consensus 42 ~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD 76 (307)
T 3end_A 42 KVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIG 76 (307)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEe
Confidence 44555556689999999999999999999999983
No 326
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=22.49 E-value=68 Score=29.20 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=26.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
.||-|+-.+..|. ++|+.|.++||+|++..
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 4799999998884 68999999999999884
No 327
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=22.45 E-value=68 Score=27.63 Aligned_cols=38 Identities=13% Similarity=-0.019 Sum_probs=30.2
Q ss_pred CcEEEEec--CCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 042970 7 EFHILLLP--FLAQGHLIPMFDMARLLANH-RAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~--~p~~GHv~P~l~La~~L~~r-GH~V~~~~~~ 44 (489)
+++++.+. -|+.|-..=...||..|+++ |+.|.++=..
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 34555554 46899999999999999999 9999998443
No 328
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=22.33 E-value=49 Score=32.37 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=26.6
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|..+++..+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 5 m~~~~~~~dVvVIGgG~aG-----l~aA~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSGG-----VASARRAASYGAKTLLVEAK 43 (479)
T ss_dssp -----CEEEEEEECCSHHH-----HHHHHHHHHTSCCEEEEESS
T ss_pred ccCccccCCEEEEcCCHHH-----HHHHHHHHHCCCcEEEEeCC
Confidence 4555556789888877543 67788888899999999543
No 329
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=22.30 E-value=2.7e+02 Score=24.64 Aligned_cols=33 Identities=18% Similarity=0.019 Sum_probs=24.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
.++++++.++.| =-.++|++|+++|++|.++.-
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAADGVTVGALGR 60 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777766543 236789999999999988753
No 330
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=22.26 E-value=2.6e+02 Score=24.47 Aligned_cols=33 Identities=18% Similarity=0.023 Sum_probs=23.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
-|+++++.++.| + -.++|++|+++|++|.++.-
T Consensus 11 ~k~~lVTGas~G-I--G~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 11 GRVAFITGAARG-Q--GRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp TCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCccH-H--HHHHHHHHHHcCCEEEEEec
Confidence 356677766532 2 36789999999999998743
No 331
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=22.25 E-value=1e+02 Score=25.81 Aligned_cols=59 Identities=10% Similarity=0.069 Sum_probs=37.3
Q ss_pred ccHHHHHHHHHHhccCChh---HHHHHHHHHHHHHHHHH----HHhhCCChHHHHHHHHHHHHcCCC
Q 042970 426 VKKDDVETAINILMDDGEE---RDVRRKRAKEFEELAKR----ALEEGGSSYNNIQLFFQDIMQQPT 485 (489)
Q Consensus 426 ~~~~~l~~ai~~il~~~~~---~~~~~~~a~~l~~~~~~----~~~~gg~~~~~~~~~~~~~~~~~~ 485 (489)
+|+++|.++|.+++....+ .+.|+ +.-.+-..+++ -+++|......+|+-+-++-.-+|
T Consensus 117 VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~l~lLGPKt 182 (187)
T 3tl4_X 117 ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEVLKLLGPKD 182 (187)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHHHHHHCSCC
T ss_pred eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHcCCcc
Confidence 5889999999999853211 22455 55555444443 256777778888876666655444
No 332
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=22.24 E-value=2.6e+02 Score=24.51 Aligned_cols=33 Identities=21% Similarity=0.088 Sum_probs=24.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
-|+++++.++.| =-..+|++|+++|++|+++.-
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 357777766543 246889999999999998753
No 333
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=22.23 E-value=99 Score=29.95 Aligned_cols=33 Identities=36% Similarity=0.398 Sum_probs=26.8
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
+..||+|+-.+..| +.+|+.|+++||+|+..=.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 46799999987655 3569999999999999743
No 334
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.23 E-value=1.5e+02 Score=22.87 Aligned_cols=39 Identities=13% Similarity=0.235 Sum_probs=26.5
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|+..+++++|+++- .+-.-.-.|.+.|.+.|++|..+..
T Consensus 1 Ms~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 2rjn_A 1 MSLNYKNYTVMLVD----DEQPILNSLKRLIKRLGCNIITFTS 39 (154)
T ss_dssp ---CCSCCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESC
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 67677788999885 3455566777888888999886543
No 335
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=22.22 E-value=1.1e+02 Score=27.48 Aligned_cols=38 Identities=11% Similarity=-0.180 Sum_probs=27.0
Q ss_pred CcEEEEecCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQ-GHLI---PMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~-GHv~---P~l~La~~L~~rGH~V~~~~~~ 44 (489)
++||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 468888876532 2222 3457999999999999988654
No 336
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=22.18 E-value=75 Score=29.97 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=44.6
Q ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCCccccccccChh
Q 042970 291 CNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPAVGGFLTHCGWN 370 (489)
Q Consensus 291 ~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~HgG~~ 370 (489)
...+.+....+.+++.+.+++.||++.++.....+ .++++...+-.+|.. ||=.+-..
T Consensus 91 agtd~~Ra~dL~~af~Dp~i~aI~~~rGGyga~rl--------------------Lp~LD~~~i~~~PK~--fiGySDiT 148 (371)
T 3tla_A 91 SGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSL--------------------LPFLDYDAIIANPKI--IIGYSDTT 148 (371)
T ss_dssp SSCHHHHHHHHHHHHTCTTEEEEEESCCCSCGGGG--------------------GGGSCHHHHHHSCCE--EEECGGGH
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEccccccHHHH--------------------HhhcChhhHHhCCcE--EEEechHH
Confidence 33455667789999999999999998876644332 233333334344444 55555555
Q ss_pred hHHHHHH--hCCcEeecCC
Q 042970 371 SSLEGIS--AGVQMLTWPL 387 (489)
Q Consensus 371 s~~eal~--~GvP~l~~P~ 387 (489)
.++-|++ .|++.+--|.
T Consensus 149 aL~~ai~~k~Gl~T~hGP~ 167 (371)
T 3tla_A 149 ALLAGIYAKTGLITFYGPA 167 (371)
T ss_dssp HHHHHHHHHHCBCEEECCC
T ss_pred HHHHHHHHHcCCEEEECcc
Confidence 5555443 3555555554
No 337
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=22.16 E-value=88 Score=25.47 Aligned_cols=27 Identities=30% Similarity=0.138 Sum_probs=21.4
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhC
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEAS 308 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~ 308 (489)
.+|+++||..+.....+...+.+|.+.
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~ 32 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEY 32 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 699999998875566777788888774
No 338
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=22.15 E-value=1.9e+02 Score=26.48 Aligned_cols=82 Identities=15% Similarity=-0.095 Sum_probs=0.0
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCC
Q 042970 279 PSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHP 358 (489)
Q Consensus 279 ~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~ 358 (489)
++-.|.++-.|-.. +.+.++...|++.+..+.+......... .-+-...+....
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~~-----------------------~~~~~~~~~~~~ 83 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGDA-----------------------ARYVEEARKFGV 83 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTHH-----------------------HHHHHHHHHHTC
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcchH-----------------------HHHHHHHHhcCC
Q ss_pred CccccccccChhhHHHHH--------HhCCcEeecCCc
Q 042970 359 AVGGFLTHCGWNSSLEGI--------SAGVQMLTWPLF 388 (489)
Q Consensus 359 ~~~~~I~HgG~~s~~eal--------~~GvP~l~~P~~ 388 (489)
++ +|.-||=||+.|++ ..++|+.++|..
T Consensus 84 d~--vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 84 AT--VIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp SE--EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred CE--EEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
No 339
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=22.06 E-value=74 Score=31.06 Aligned_cols=35 Identities=17% Similarity=-0.005 Sum_probs=26.9
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeC
Q 042970 4 EASEFHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTT 43 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~ 43 (489)
|++.+||.++-.|..| ..+|..|+++ ||+|+++..
T Consensus 2 M~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 3345789999887776 4678888888 899998843
No 340
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=22.03 E-value=95 Score=27.52 Aligned_cols=33 Identities=18% Similarity=-0.106 Sum_probs=24.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
-|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777776644 236789999999999988754
No 341
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=21.95 E-value=92 Score=26.36 Aligned_cols=32 Identities=3% Similarity=-0.119 Sum_probs=27.1
Q ss_pred EEEec-CCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 10 ILLLP-FLAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 10 vl~~~-~p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
|.++. -++.|-..=.+.||..|+++|+.|.++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 44444 368999999999999999999999986
No 342
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=21.79 E-value=2.8e+02 Score=24.34 Aligned_cols=33 Identities=24% Similarity=0.026 Sum_probs=24.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
-|+++++.++.| =-.++|++|+++|++|+++.-
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 356777766643 235789999999999988864
No 343
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=21.73 E-value=45 Score=27.83 Aligned_cols=39 Identities=5% Similarity=-0.087 Sum_probs=20.4
Q ss_pred CCCCCcEEEEecCCCccCHHHHHHHHHHHHh---CCCeEEEEe
Q 042970 3 SEASEFHILLLPFLAQGHLIPMFDMARLLAN---HRAIVTIVT 42 (489)
Q Consensus 3 ~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~---rGH~V~~~~ 42 (489)
+|+++|||+++....+.+ .-...|++.+++ .|++|.++-
T Consensus 2 ~m~~~Mkilii~gS~r~~-g~t~~la~~i~~~l~~g~~v~~~d 43 (193)
T 1rtt_A 2 SLSDDIKVLGISGSLRSG-SYNSAALQEAIGLVPPGMSIELAD 43 (193)
T ss_dssp -----CEEEEEESCCSTT-CHHHHHHHHHHTTCCTTCEEEECC
T ss_pred CCCCCceEEEEECCCCCC-ChHHHHHHHHHHhccCCCeEEEEe
Confidence 344457888887665422 244556666544 477777763
No 344
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=21.71 E-value=55 Score=30.52 Aligned_cols=35 Identities=11% Similarity=0.127 Sum_probs=24.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANH-RAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~r-GH~V~~~~~~ 44 (489)
++++|+++- +.|.+- ..|+++|.++ ||+|+.+.-.
T Consensus 23 ~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 23 KAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred CCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 356776654 334443 5788999998 9999998643
No 345
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=21.64 E-value=45 Score=29.65 Aligned_cols=33 Identities=15% Similarity=0.006 Sum_probs=24.6
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+++|+++- + |.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 36777774 4 6554 46789999999999998754
No 346
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=21.63 E-value=76 Score=27.10 Aligned_cols=31 Identities=16% Similarity=0.311 Sum_probs=24.3
Q ss_pred CCCcEEE-ECCCCc-chHHHHHHcCCCcEEEec
Q 042970 117 PKPCCII-SDMGYP-WTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 117 ~~~D~VI-~D~~~~-~~~~~A~~lgIP~v~l~~ 147 (489)
..||+|| .|+..- -+..=|.++|||.|.+.-
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvD 146 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCD 146 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeC
Confidence 4789876 777554 677789999999999754
No 347
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=21.57 E-value=42 Score=32.90 Aligned_cols=29 Identities=14% Similarity=0.009 Sum_probs=23.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
+||+++-.|-.| |.-|..|+++||+|+++
T Consensus 2 k~VvVIGaG~~G-----L~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 2 KPTTVIGAGFGG-----LALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCcHHH-----HHHHHHHHHCCCcEEEE
Confidence 568888766544 77788999999999998
No 348
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.53 E-value=60 Score=32.02 Aligned_cols=35 Identities=23% Similarity=0.178 Sum_probs=28.0
Q ss_pred HHHHHHHhhcCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 042970 106 LPFENLFSEQSPKPCCIISDMGYPWTVDTAAKFNVPRIVF 145 (489)
Q Consensus 106 ~~l~~ll~~~~~~~D~VI~D~~~~~~~~~A~~lgIP~v~l 145 (489)
.++.+++++ .+||++|... ....+|+++|||++.+
T Consensus 407 ~el~~~i~~--~~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 407 YEFEEFVKR--IKPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHH--HCCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHHh--cCCcEEEeCc---chhHHHHHcCCCEEec
Confidence 356677777 7999999873 4578999999999964
No 349
>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A
Probab=21.50 E-value=88 Score=24.92 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=28.4
Q ss_pred ccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 042970 426 VKKDDVETAINILMDDGEERDVRRKRAKEFEELAK 460 (489)
Q Consensus 426 ~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 460 (489)
.+-..-++.|..+|.|++..+.-|++|++.+.++.
T Consensus 107 ~~VR~kak~l~~Ll~D~~~L~~eR~~a~~~r~k~~ 141 (144)
T 1eyh_A 107 VNVREKAKQLVALLRDEDRLREERAHALKTKEKLA 141 (144)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHh
Confidence 44455566677788999999999999999999986
No 350
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=21.49 E-value=4.1e+02 Score=23.82 Aligned_cols=105 Identities=11% Similarity=0.100 Sum_probs=59.0
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC-cchhhHHHHHHHhhhCCCceEEEEeeCCcccCCCCCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANH--RAIVTIVTTP-VNAARLKTVLARAVQSGLQIRLVEIQFPWQEAGLPQG 81 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~r--GH~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (489)
.+++||+++.++. || -+-+|..+-.+- ..+|.++.+. .....+ .+. .|+.++.+|. ..
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~---A~~-----~gIp~~~~~~--------~~ 153 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPL---AAQ-----HGLPFRHFPI--------TA 153 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHH---HHH-----TTCCEEECCC--------CS
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHH---HHH-----cCCCEEEeCC--------Cc
Confidence 3478999888776 54 355555554433 4677766443 222222 221 2788877651 10
Q ss_pred CCCCCCCCchhhHHHHHHHHhhchHHHHHHHhhcCCCCcEEEECCCC-cchHHHHHHcCCCcEEEec
Q 042970 82 CENFDMLPSIDLASKFFNSHSMLQLPFENLFSEQSPKPCCIISDMGY-PWTVDTAAKFNVPRIVFHG 147 (489)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~D~VI~D~~~-~~~~~~A~~lgIP~v~l~~ 147 (489)
.. . ....+.+.+++++ .++|+||.-.+. .-...+-+.+.-.++-+++
T Consensus 154 -------~~-r---------~~~~~~~~~~l~~--~~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 201 (292)
T 3lou_A 154 -------DT-K---------AQQEAQWLDVFET--SGAELVILARYMQVLSPEASARLANRAINIHH 201 (292)
T ss_dssp -------SC-H---------HHHHHHHHHHHHH--HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred -------CC-H---------HHHHHHHHHHHHH--hCCCEEEecCchhhCCHHHHhhhcCCeEEeCC
Confidence 00 0 0123466677777 799999976654 4555566666666666543
No 351
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=21.42 E-value=82 Score=27.91 Aligned_cols=37 Identities=16% Similarity=0.107 Sum_probs=29.9
Q ss_pred CCcEEEEecCC---CccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 6 SEFHILLLPFL---AQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 6 ~~~~vl~~~~p---~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
.+||.+|++.+ +.|-=.-.-.|++.|.+||+.|+..=
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~K 60 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIK 60 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEe
Confidence 46799999977 44555667889999999999999873
No 352
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=21.40 E-value=2.7e+02 Score=23.87 Aligned_cols=33 Identities=18% Similarity=0.097 Sum_probs=22.8
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+.++++.++ |-+ -..++++|.++|++|+++.-.
T Consensus 14 k~vlItGas-ggi--G~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGA-QNI--GLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455555443 322 367899999999999988643
No 353
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=21.37 E-value=60 Score=27.46 Aligned_cols=33 Identities=9% Similarity=0.143 Sum_probs=22.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|||+++- +.|-+= ..|+++|.++||+|+.+.-.
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 3555543 334332 58899999999999998644
No 354
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=21.35 E-value=3.3e+02 Score=25.11 Aligned_cols=109 Identities=14% Similarity=0.075 Sum_probs=59.3
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCCC
Q 042970 281 SVVYVCLGSICNLTSSQLIELGLGLEAS-KKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHPA 359 (489)
Q Consensus 281 ~vVyvs~GS~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~~ 359 (489)
.+..|++|.+.. ..+.++... +..++.+....... . +.....++ .-|-...++|..++
T Consensus 7 ~vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~~-----------~-~~a~~~g~--~~~~~~~~ll~~~~ 65 (359)
T 3e18_A 7 QLVIVGYGGMGS-------YHVTLASAADNLEVHGVFDILAEK-----------R-EAAAQKGL--KIYESYEAVLADEK 65 (359)
T ss_dssp EEEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSSHHH-----------H-HHHHTTTC--CBCSCHHHHHHCTT
T ss_pred cEEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCCHHH-----------H-HHHHhcCC--ceeCCHHHHhcCCC
Confidence 478888887653 233445544 45555444332111 0 00112233 23556788888666
Q ss_pred ccccccccCh----hhHHHHHHhCCcEee-cCCcC--cchhhHHHHHHHhcceeEecc
Q 042970 360 VGGFLTHCGW----NSSLEGISAGVQMLT-WPLFG--DQFCNEKLIVEVLRIGVSVGV 410 (489)
Q Consensus 360 ~~~~I~HgG~----~s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~e~~g~G~~l~~ 410 (489)
+.+++--.-. --+.+|+.+|++++| -|+.. ++..-...++++.|+-+.+..
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 123 (359)
T 3e18_A 66 VDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ 123 (359)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe
Confidence 5556643332 246788999999998 46544 444444444456776555543
No 355
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=21.34 E-value=1.9e+02 Score=23.06 Aligned_cols=38 Identities=8% Similarity=0.056 Sum_probs=30.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+++||+++.++.. ...-+....+.|...|++|.++++.
T Consensus 1 ~~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 1 ASMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4678999988864 4455667778889999999999865
No 356
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=21.25 E-value=71 Score=29.25 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=24.8
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|||.|+-.|..|. .+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEEc
Confidence 4788887776663 568899999999999865
No 357
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=21.22 E-value=61 Score=29.88 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=26.6
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 6 SEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 6 ~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
+...|+++-.+..| +..|..|+++|++|+++-
T Consensus 3 ~~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE 34 (369)
T 3dme_A 3 TDIDCIVIGAGVVG-----LAIARALAAGGHEVLVAE 34 (369)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CcCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEe
Confidence 35679998888655 788999999999999984
No 358
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=21.16 E-value=1.1e+02 Score=23.43 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=23.8
Q ss_pred HHhhcCCCCcEEEECCCCc--chHHHHHHc---------CCCcEEEecc
Q 042970 111 LFSEQSPKPCCIISDMGYP--WTVDTAAKF---------NVPRIVFHGF 148 (489)
Q Consensus 111 ll~~~~~~~D~VI~D~~~~--~~~~~A~~l---------gIP~v~l~~~ 148 (489)
.++. .+||+||.|...+ -+..+.+.+ .+|.+.++..
T Consensus 53 ~~~~--~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 53 AMAE--EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 3455 6999999997654 455555443 3788877654
No 359
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=21.12 E-value=2.3e+02 Score=24.57 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=23.6
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
++++++.++.| =-..+|++|+++|++|.++.-
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 56777766533 346789999999999988754
No 360
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=20.89 E-value=87 Score=26.35 Aligned_cols=30 Identities=0% Similarity=0.029 Sum_probs=24.8
Q ss_pred CCCccccccccChhhHHHHHHhCCcEeecCCcC
Q 042970 357 HPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFG 389 (489)
Q Consensus 357 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 389 (489)
.+++ +|+.||-....... .++|+|-+|..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3455 99999999988875 689999999865
No 361
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=20.88 E-value=3.5e+02 Score=22.12 Aligned_cols=140 Identities=14% Similarity=0.078 Sum_probs=81.3
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHH---HhcCCCeEEecccchHhhhc
Q 042970 280 SSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEE---RIKGRGLLIRGWVPQVMILS 356 (489)
Q Consensus 280 ~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~v~~~~pq~~ll~ 356 (489)
+|.|-|-+||.. |-...++....|+..+..+-..+.+-.. .|+.+.+ .....+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--------~p~~l~~~~~~a~~~g-------------- 66 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--------TPDYMFEYAETARERG-------------- 66 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHHHHHHTTTTT--------------
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC--------CHHHHHHHHHHHHhCC--------------
Confidence 456888888876 5666777888888888887666654432 3433221 111111
Q ss_pred CCCccccccccCh----hhHHHHHHhCCcEeecCCcCc--chhhH-HHHHHH--hcceeE---ecccCCccccccccccc
Q 042970 357 HPAVGGFLTHCGW----NSSLEGISAGVQMLTWPLFGD--QFCNE-KLIVEV--LRIGVS---VGVEVPLKFGEEEKIGV 424 (489)
Q Consensus 357 ~~~~~~~I~HgG~----~s~~eal~~GvP~l~~P~~~D--Q~~na-~~v~e~--~g~G~~---l~~~~~~~~~~~~~~~~ 424 (489)
.++ +|.=.|. .++..++ .-+|+|.+|.... +...+ .-+. + .|+.+. ++.. .
T Consensus 67 -~~V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSiv-qmP~GvpVatV~I~~a------------~ 129 (170)
T 1xmp_A 67 -LKV--IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIGKA------------G 129 (170)
T ss_dssp -CCE--EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHH-CCCTTCCCEECCSSHH------------H
T ss_pred -CcE--EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecCCc------------c
Confidence 222 5554443 3444443 4789999998542 22222 1232 4 455421 2200 1
Q ss_pred cccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhh
Q 042970 425 LVKKDDVETAINILMDDGEERDVRRKRAKEFEELAKRALEE 465 (489)
Q Consensus 425 ~~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~~~~~~ 465 (489)
..++.-++..|. -+.|+ .++++.+..++..++.+.+
T Consensus 130 ~~nAallAaqIl-a~~d~----~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 130 STNAGLLAAQIL-GSFHD----DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHH-HTTCH----HHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHH-ccCCH----HHHHHHHHHHHHHHHHHHh
Confidence 367777776665 34566 8999999999988877655
No 362
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=20.84 E-value=1.6e+02 Score=25.09 Aligned_cols=40 Identities=23% Similarity=0.100 Sum_probs=24.7
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
|...++.+++++ +.+ .|.+ -..++++|+++|++|+++.-.
T Consensus 1 m~~~~~~~~vlV-TGa-sggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 1 MKLNFSGLRALV-TGA-GKGI--GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp --CCCTTCEEEE-EST-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CccCCCCCEEEE-eCC-CchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 444455555544 433 3433 357899999999999887643
No 363
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=20.83 E-value=98 Score=25.17 Aligned_cols=27 Identities=26% Similarity=0.246 Sum_probs=21.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhC
Q 042970 282 VVYVCLGSICNLTSSQLIELGLGLEAS 308 (489)
Q Consensus 282 vVyvs~GS~~~~~~~~~~~~~~al~~~ 308 (489)
.+|+++||..+...+.+...+..|.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 29 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQL 29 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhC
Confidence 489999998875566677788888764
No 364
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.82 E-value=1.1e+02 Score=24.09 Aligned_cols=38 Identities=13% Similarity=0.119 Sum_probs=25.1
Q ss_pred CcEEEEec-CCCccCH--HHHHHHHHHHHhCCCeE-EEEeCC
Q 042970 7 EFHILLLP-FLAQGHL--IPMFDMARLLANHRAIV-TIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~-~p~~GHv--~P~l~La~~L~~rGH~V-~~~~~~ 44 (489)
.||++|+- .|-+|+- .--+.+|+++.+.||+| .++-..
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 35555443 4445544 44578899999999999 766544
No 365
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=20.80 E-value=1.4e+02 Score=21.91 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=24.5
Q ss_pred HHHhhcCCCCcEEEECCCCc--chHHHHH----HcCCCcEEEecch
Q 042970 110 NLFSEQSPKPCCIISDMGYP--WTVDTAA----KFNVPRIVFHGFS 149 (489)
Q Consensus 110 ~ll~~~~~~~D~VI~D~~~~--~~~~~A~----~lgIP~v~l~~~~ 149 (489)
+.+++ .+||+||.|...+ .+..+.+ ..++|.+.++...
T Consensus 40 ~~~~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 40 EMVEE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHhh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 34455 6899999998654 3444433 3468888776544
No 366
>1xgw_A Epsin 4; ENTH, enthoprotin, clathrin-associated, endocytosis; 1.90A {Homo sapiens} PDB: 2qy7_A 2v8s_E
Probab=20.77 E-value=45 Score=27.69 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=21.5
Q ss_pred ccHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Q 042970 426 VKKDDVETAINILMDDGEERDVRRKRAKEFEELAK 460 (489)
Q Consensus 426 ~~~~~l~~ai~~il~~~~~~~~~~~~a~~l~~~~~ 460 (489)
.+-.+-++.|..+|.|++..+.-|++|++.+.++.
T Consensus 137 ~~VR~kAk~i~~LL~D~e~Lr~eR~ka~k~r~k~~ 171 (176)
T 1xgw_A 137 INIRQKVKELVEFAQDDDRLREERKKAKKNKDKYV 171 (176)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhcc
Confidence 44555666777889999999999999999999886
No 367
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=20.71 E-value=69 Score=29.68 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=23.6
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHh--CCCeEEEEeC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLAN--HRAIVTIVTT 43 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~--rGH~V~~~~~ 43 (489)
++.++|+++- +.|-+ -..|+++|.+ +||+|+.+.-
T Consensus 8 ~~~~~vlVTG--atG~I--G~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 8 LENQTILITG--GAGFV--GSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CTTCEEEEET--TTSHH--HHHHHHHHHHHCTTSEEEEEEC
T ss_pred cCCCEEEEEC--CCCHH--HHHHHHHHHhhCCCCeEEEEEC
Confidence 3456666652 22333 2478899999 9999999864
No 368
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=20.71 E-value=3e+02 Score=23.72 Aligned_cols=34 Identities=15% Similarity=-0.019 Sum_probs=24.9
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
++|.++++.++. -+ -.++|++|+++|++|+++..
T Consensus 6 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcC
Confidence 456777776653 22 35889999999999998743
No 369
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=20.70 E-value=1.6e+02 Score=24.82 Aligned_cols=37 Identities=14% Similarity=0.020 Sum_probs=29.1
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTP 44 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~ 44 (489)
+.||+++.+++. ...-+......|...|++|++++..
T Consensus 9 ~~~v~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 9 SKRILVPVAHGS-EEMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCC-cHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 357888888764 3566677778999999999999875
No 370
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=20.65 E-value=1.7e+02 Score=25.57 Aligned_cols=39 Identities=15% Similarity=0.032 Sum_probs=24.5
Q ss_pred CCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 1 MASEASEFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 1 m~~~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|...++.+ +++++.++ |-+ -..++++|+++||+|+++.-
T Consensus 1 M~~~l~~k-~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 1 MSGRLTGK-VALVSGGA-RGM--GASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp -CCTTTTC-EEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCC-EEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 55445444 45555443 322 35789999999999998754
No 371
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=20.48 E-value=95 Score=27.25 Aligned_cols=33 Identities=9% Similarity=0.065 Sum_probs=28.7
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
.|.|..-|+.|-..=...||..|+++|+.|.++
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~Vlli 35 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVV 35 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEE
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEE
Confidence 455555678999999999999999999999998
No 372
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=20.40 E-value=1.2e+02 Score=26.12 Aligned_cols=34 Identities=3% Similarity=-0.000 Sum_probs=27.8
Q ss_pred cEEEEec-C-CCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 8 FHILLLP-F-LAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 8 ~~vl~~~-~-p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
|+.+|++ . +..|-..-...|++.|+++|+.|.++
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~ 39 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCL 39 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEe
Confidence 3444444 3 48899999999999999999999988
No 373
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=20.28 E-value=55 Score=29.90 Aligned_cols=36 Identities=11% Similarity=0.043 Sum_probs=25.3
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHHHHhCCC--eEEEEeCC
Q 042970 4 EASEFHILLLPFLAQGHLIPMFDMARLLANHRA--IVTIVTTP 44 (489)
Q Consensus 4 ~~~~~~vl~~~~p~~GHv~P~l~La~~L~~rGH--~V~~~~~~ 44 (489)
+.+++||+++-.|..|-. +|..|..+|| +|+++...
T Consensus 4 ~~~~mkI~IiGaG~vG~~-----~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 4 TVKPTKLAVIGAGAVGST-----LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp ---CCEEEEECCSHHHHH-----HHHHHHHTTCCSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHH-----HHHHHHhCCCCCEEEEEeCC
Confidence 445689999876554433 7778999999 99998654
No 374
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=20.26 E-value=1e+02 Score=26.94 Aligned_cols=36 Identities=11% Similarity=0.057 Sum_probs=29.4
Q ss_pred CCcEEEEecC--CCccCHHHHHHHHHHHHhCCCeEEEE
Q 042970 6 SEFHILLLPF--LAQGHLIPMFDMARLLANHRAIVTIV 41 (489)
Q Consensus 6 ~~~~vl~~~~--p~~GHv~P~l~La~~L~~rGH~V~~~ 41 (489)
++++.+|++. ...|=..-.+.|++.|+++|..|.++
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~f 56 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILL 56 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEE
Confidence 3455565553 47889999999999999999999998
No 375
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=20.14 E-value=79 Score=29.28 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=24.7
Q ss_pred HHHHHHhhcCCCCcEEEECCCCc-chHHHHHHcCCCcEEEe
Q 042970 107 PFENLFSEQSPKPCCIISDMGYP-WTVDTAAKFNVPRIVFH 146 (489)
Q Consensus 107 ~l~~ll~~~~~~~D~VI~D~~~~-~~~~~A~~lgIP~v~l~ 146 (489)
.++++++- +||+||...... -.....+.+|||++.+.
T Consensus 88 n~E~Ilal---~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 88 DLESLITL---QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CHHHHHHH---CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CHHHHhcC---CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 45666654 999999765432 22334577899999864
No 376
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.13 E-value=2e+02 Score=25.93 Aligned_cols=84 Identities=10% Similarity=-0.062 Sum_probs=0.0
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCchhhhhhhhchhhHHHHhcCCCeEEecccchHhhhcCC
Q 042970 279 PSSVVYVCLGSICNLTSSQLIELGLGLEASKKPFIWVTRVGNKLEELEKWLVEENFEERIKGRGLLIRGWVPQVMILSHP 358 (489)
Q Consensus 279 ~~~vVyvs~GS~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~pq~~ll~~~ 358 (489)
.+-.|.++--|-.....+.+..+...|+..+..+.+........... +.. ++....
T Consensus 9 ~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~----~~~--------------------~~~~~~ 64 (304)
T 3s40_A 9 EKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATK----YCQ--------------------EFASKV 64 (304)
T ss_dssp SSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHH----HHH--------------------HHTTTC
T ss_pred CEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHH----HHH--------------------HhhcCC
Q ss_pred CccccccccChhhHHHHHH------hCCcEeecCCc
Q 042970 359 AVGGFLTHCGWNSSLEGIS------AGVQMLTWPLF 388 (489)
Q Consensus 359 ~~~~~I~HgG~~s~~eal~------~GvP~l~~P~~ 388 (489)
++ +|.-||=||+.|++. .++|+-++|..
T Consensus 65 d~--vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 65 DL--IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp SE--EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CE--EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
No 377
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=20.13 E-value=73 Score=28.00 Aligned_cols=30 Identities=13% Similarity=0.134 Sum_probs=23.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 042970 8 FHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVT 42 (489)
Q Consensus 8 ~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~ 42 (489)
|||.|+-.|..|. .+|+.|.+.||+|++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeC
Confidence 4788887776664 57899999999999853
No 378
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=20.13 E-value=71 Score=28.29 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=25.5
Q ss_pred CCCCcEEE-ECCCCc-chHHHHHHcCCCcEEEecc
Q 042970 116 SPKPCCII-SDMGYP-WTVDTAAKFNVPRIVFHGF 148 (489)
Q Consensus 116 ~~~~D~VI-~D~~~~-~~~~~A~~lgIP~v~l~~~ 148 (489)
...||+|| .|+..- -+..=|.++|||.|.+.-+
T Consensus 156 ~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 156 KRLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 46899986 777554 6778899999999997543
No 379
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=20.11 E-value=29 Score=33.95 Aligned_cols=41 Identities=24% Similarity=0.295 Sum_probs=30.9
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcchhhHHHHH
Q 042970 7 EFHILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTTPVNAARLKTVL 54 (489)
Q Consensus 7 ~~~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~ 54 (489)
.|||+++-.|-.| ..||+.|.+.||+|+++= .+.+.++...
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId--~d~~~~~~~~ 43 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVD--KDGDRLRELQ 43 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEE--SCHHHHHHHH
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEE--CCHHHHHHHH
Confidence 5889999888655 469999999999999983 4455555443
No 380
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=20.08 E-value=1e+02 Score=30.14 Aligned_cols=35 Identities=20% Similarity=-0.005 Sum_probs=29.3
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhC-CC-eEEEEeCC
Q 042970 5 ASEFHILLLPFLAQGHLIPMFDMARLLANH-RA-IVTIVTTP 44 (489)
Q Consensus 5 ~~~~~vl~~~~p~~GHv~P~l~La~~L~~r-GH-~V~~~~~~ 44 (489)
++.+||.++-.|..| +.+|..|+++ || +|+++-..
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 456799999998888 5789999999 99 99998543
No 381
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=20.02 E-value=3.1e+02 Score=23.65 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=23.5
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 042970 9 HILLLPFLAQGHLIPMFDMARLLANHRAIVTIVTT 43 (489)
Q Consensus 9 ~vl~~~~p~~GHv~P~l~La~~L~~rGH~V~~~~~ 43 (489)
|+++++.++.| =-.++|++|+++|++|+++.-
T Consensus 7 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 7 KVVIITGGSSG---MGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56677766543 236789999999999988753
Done!