BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042971
WWAPAKFDPVKSPMLFFEKDKPVIPPVQPNVGLDMIQYVEKTARPGSIKLFRTQSPRHFE
GVDWDQGGSCQRLQPLLPEQ

High Scoring Gene Products

Symbol, full name Information P value
TBL13
AT2G14530
protein from Arabidopsis thaliana 3.8e-30
TBL12
AT5G64470
protein from Arabidopsis thaliana 1.8e-12
TBL21
AT5G15890
protein from Arabidopsis thaliana 0.00043

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042971
        (80 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2055200 - symbol:TBL13 "AT2G14530" species:370...   333  3.8e-30   1
TAIR|locus:2179386 - symbol:TBL12 "AT5G64470" species:370...   173  1.8e-12   1
TAIR|locus:2146062 - symbol:TBL21 "AT5G15890" species:370...    85  0.00043   2


>TAIR|locus:2055200 [details] [associations]
            symbol:TBL13 "AT2G14530" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005794 "Golgi apparatus"
            evidence=IDA] GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR
            InterPro:IPR026057 Pfam:PF13839 EMBL:AC006067 InterPro:IPR025846
            Pfam:PF14416 HOGENOM:HOG000238734 EMBL:AY074875 EMBL:AY124844
            IPI:IPI00529966 PIR:C84518 RefSeq:NP_179059.1 UniGene:At.43682
            EnsemblPlants:AT2G14530.1 GeneID:815940 KEGG:ath:AT2G14530
            TAIR:At2g14530 eggNOG:NOG289739 InParanoid:Q9ZQR5 OMA:KWRPAGA
            PhylomeDB:Q9ZQR5 ProtClustDB:CLSN2683455 ArrayExpress:Q9ZQR5
            Genevestigator:Q9ZQR5 Uniprot:Q9ZQR5
        Length = 412

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 59/83 (71%), Positives = 67/83 (80%)

Query:     1 WWAPAKFDPVKSPMLFFEKDKPVIPPVQPNVGLD-----MIQYVEKTARPGSIKLFRTQS 55
             WWAP+KFDPVKSPMLFFE  +P++PP+ P  GLD     M+ +VEKT RPG I  FRTQS
Sbjct:   241 WWAPSKFDPVKSPMLFFEGGRPILPPIPPATGLDRVLNNMVNFVEKTKRPGGIIFFRTQS 300

Query:    56 PRHFEGVDWDQGGSCQRLQPLLP 78
             PRHFEG DWDQGG+CQRLQPLLP
Sbjct:   301 PRHFEGGDWDQGGTCQRLQPLLP 323


>TAIR|locus:2179386 [details] [associations]
            symbol:TBL12 "AT5G64470" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR026057 Pfam:PF13839 EMBL:AB025640 InterPro:IPR025846
            Pfam:PF14416 EMBL:AF360229 EMBL:AY040030 IPI:IPI00533903
            RefSeq:NP_201252.1 UniGene:At.20596 EnsemblPlants:AT5G64470.2
            GeneID:836568 KEGG:ath:AT5G64470 TAIR:At5g64470
            HOGENOM:HOG000238734 InParanoid:Q9FGE9 OMA:HRNAWNC PhylomeDB:Q9FGE9
            ProtClustDB:CLSN2686267 ArrayExpress:Q9FGE9 Genevestigator:Q9FGE9
            Uniprot:Q9FGE9
        Length = 407

 Score = 173 (66.0 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:     1 WWAPAKFDPVKSPMLFFEKDKPVIPPVQ--PNVGL---DMIQYVEKTARPGSIKLFRTQS 55
             WW   KF P ++P++F+ K KP+ PP+   P   L   +M+ Y+++     ++K +R QS
Sbjct:   231 WWGYDKF-PKETPLVFYRKGKPINPPLDILPGFELVLQNMVSYIQREVPAKTLKFWRLQS 289

Query:    56 PRHFEGVDWDQGGSCQRLQPLLPEQ 80
             PRHF G DW+Q GSC   +PL   Q
Sbjct:   290 PRHFYGGDWNQNGSCLLDKPLEENQ 314


>TAIR|locus:2146062 [details] [associations]
            symbol:TBL21 "AT5G15890" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL391145
            InterPro:IPR026057 Pfam:PF13839 InterPro:IPR025846 Pfam:PF14416
            HOGENOM:HOG000238130 IPI:IPI00525844 PIR:T51372 RefSeq:NP_197093.1
            UniGene:At.43291 UniGene:At.66717 PRIDE:Q9LFT1
            EnsemblPlants:AT5G15890.1 GeneID:831446 KEGG:ath:AT5G15890
            TAIR:At5g15890 eggNOG:NOG251262 InParanoid:Q9LFT1 OMA:GCHYCLV
            PhylomeDB:Q9LFT1 Genevestigator:Q9LFT1 Uniprot:Q9LFT1
        Length = 526

 Score = 85 (35.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query:    48 IKLFRTQSPRHFEGVDWDQGGSCQRLQP 75
             +   R+ SP+HFEG  W++GG C R QP
Sbjct:   404 LAFLRSFSPQHFEGGAWNEGGDCVRTQP 431

 Score = 33 (16.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query:     5 AKFDPVKSPMLFFEKDKPVIPPVQPNVGLD 34
             + FD + SPM     + PV  P   N   D
Sbjct:   114 SSFDQIPSPM-----NSPVPAPPHRNSSAD 138


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.140   0.466    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       80        80   0.00091  102 3  12 22  0.44    29
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  457 (49 KB)
  Total size of DFA:  82 KB (2065 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.24u 0.27s 7.51t   Elapsed:  00:00:00
  Total cpu time:  7.24u 0.27s 7.51t   Elapsed:  00:00:00
  Start:  Sat May 11 11:55:38 2013   End:  Sat May 11 11:55:38 2013

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