Query 042973
Match_columns 152
No_of_seqs 193 out of 2143
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 11:28:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042973.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042973hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 99.4 3.4E-13 7.3E-18 99.0 5.4 65 87-152 62-126 (361)
2 KOG1025 Epidermal growth facto 99.0 1E-09 2.2E-14 86.2 8.4 48 105-152 701-753 (1177)
3 KOG0196 Tyrosine kinase, EPH ( 99.0 2.9E-10 6.4E-15 88.6 3.8 65 87-151 607-684 (996)
4 KOG3653 Transforming growth fa 98.9 3.8E-09 8.2E-14 78.3 6.4 43 104-151 214-256 (534)
5 KOG1094 Discoidin domain recep 98.8 2.1E-08 4.5E-13 76.5 8.0 48 105-152 543-590 (807)
6 KOG1026 Nerve growth factor re 98.7 3.7E-09 8E-14 82.8 0.9 52 101-152 487-544 (774)
7 KOG2052 Activin A type IB rece 98.6 4E-08 8.6E-13 72.6 3.1 41 105-150 216-256 (513)
8 KOG0193 Serine/threonine prote 98.5 4.9E-08 1.1E-12 74.5 2.8 59 90-151 382-442 (678)
9 PF07645 EGF_CA: Calcium-bindi 98.4 2.1E-07 4.6E-12 47.1 1.8 34 9-43 1-36 (42)
10 PLN00113 leucine-rich repeat r 98.3 5.2E-06 1.1E-10 68.5 9.5 37 100-136 690-727 (968)
11 KOG1095 Protein tyrosine kinas 98.2 1.5E-06 3.2E-11 70.8 4.2 51 102-152 694-750 (1025)
12 KOG0194 Protein tyrosine kinas 98.2 8.3E-07 1.8E-11 67.1 2.6 65 87-152 144-216 (474)
13 KOG0192 Tyrosine kinase specif 98.1 3.9E-06 8.4E-11 62.0 3.7 47 105-152 46-94 (362)
14 KOG1219 Uncharacterized conser 98.0 7E-06 1.5E-10 70.9 5.0 35 7-44 3937-3975(4289)
15 PLN03224 probable serine/threo 98.0 7.2E-06 1.6E-10 63.1 4.6 50 98-148 143-209 (507)
16 cd06624 STKc_ASK Catalytic dom 98.0 8.2E-06 1.8E-10 57.4 4.5 57 94-151 2-59 (268)
17 KOG0199 ACK and related non-re 98.0 6.2E-06 1.3E-10 64.7 3.7 46 106-151 116-165 (1039)
18 KOG0197 Tyrosine kinases [Sign 98.0 1.4E-06 3.1E-11 65.4 -0.2 46 105-152 211-256 (468)
19 KOG0595 Serine/threonine-prote 98.0 1.1E-05 2.3E-10 59.4 4.1 51 101-152 11-64 (429)
20 cd05102 PTKc_VEGFR3 Catalytic 97.9 8.7E-06 1.9E-10 59.3 3.0 53 99-151 6-64 (338)
21 cd05104 PTKc_Kit Catalytic dom 97.9 1.4E-05 3E-10 59.4 4.0 53 99-151 34-92 (375)
22 KOG4278 Protein tyrosine kinas 97.9 7.3E-06 1.6E-10 63.7 2.5 58 92-151 259-317 (1157)
23 cd05064 PTKc_EphR_A10 Catalyti 97.8 3.2E-05 6.9E-10 54.4 4.7 51 101-151 6-60 (266)
24 cd05108 PTKc_EGFR Catalytic do 97.8 3.2E-05 6.9E-10 55.9 4.8 51 101-151 8-63 (316)
25 cd05103 PTKc_VEGFR2 Catalytic 97.8 2.7E-05 5.8E-10 57.0 4.3 53 99-151 6-64 (343)
26 cd05033 PTKc_EphR Catalytic do 97.8 4.4E-05 9.6E-10 53.6 5.2 52 100-151 4-59 (266)
27 cd05067 PTKc_Lck_Blk Catalytic 97.8 2.6E-05 5.6E-10 54.6 3.8 49 101-151 7-55 (260)
28 cd05105 PTKc_PDGFR_alpha Catal 97.8 3E-05 6.5E-10 58.2 4.3 56 96-151 33-94 (400)
29 cd05096 PTKc_DDR1 Catalytic do 97.8 5.1E-05 1.1E-09 54.4 5.2 51 101-151 6-73 (304)
30 PRK09188 serine/threonine prot 97.8 4.6E-05 1E-09 56.4 5.0 53 99-151 17-75 (365)
31 cd05107 PTKc_PDGFR_beta Cataly 97.8 2.7E-05 5.8E-10 58.4 3.8 57 95-151 32-94 (401)
32 cd05034 PTKc_Src_like Catalyti 97.7 5.1E-05 1.1E-09 53.0 3.9 51 99-151 5-55 (261)
33 cd05106 PTKc_CSF-1R Catalytic 97.7 5.2E-05 1.1E-09 56.3 4.2 56 96-151 34-95 (374)
34 cd05068 PTKc_Frk_like Catalyti 97.7 4.6E-05 1E-09 53.3 3.7 50 100-151 6-55 (261)
35 cd05043 PTK_Ryk Pseudokinase d 97.7 6.8E-05 1.5E-09 53.0 4.5 52 100-151 6-62 (280)
36 cd05148 PTKc_Srm_Brk Catalytic 97.7 3.5E-05 7.6E-10 53.8 2.9 52 99-151 5-56 (261)
37 PF07714 Pkinase_Tyr: Protein 97.7 6E-05 1.3E-09 53.0 3.9 47 105-151 4-55 (259)
38 KOG4257 Focal adhesion tyrosin 97.7 3.6E-05 7.8E-10 60.0 2.9 50 102-151 391-445 (974)
39 PLN00034 mitogen-activated pro 97.6 7.6E-05 1.7E-09 54.8 4.4 47 105-151 79-126 (353)
40 PHA03099 epidermal growth fact 97.6 8.1E-05 1.8E-09 46.0 3.1 37 8-44 40-79 (139)
41 KOG0201 Serine/threonine prote 97.6 7.9E-05 1.7E-09 55.4 3.7 51 101-151 14-65 (467)
42 cd05061 PTKc_InsR Catalytic do 97.6 0.0001 2.2E-09 52.5 4.1 54 98-151 4-63 (288)
43 cd05049 PTKc_Trk Catalytic dom 97.6 9.5E-05 2.1E-09 52.2 3.8 50 102-151 7-62 (280)
44 cd05070 PTKc_Fyn_Yrk Catalytic 97.6 8.9E-05 1.9E-09 51.9 3.7 48 102-151 8-55 (260)
45 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.5 0.00017 3.6E-09 51.1 5.0 49 102-151 6-59 (284)
46 cd05062 PTKc_IGF-1R Catalytic 97.5 0.00011 2.3E-09 52.0 3.9 54 98-151 4-63 (277)
47 PTZ00284 protein kinase; Provi 97.5 8.5E-05 1.8E-09 56.7 3.5 41 95-135 124-165 (467)
48 cd05054 PTKc_VEGFR Catalytic d 97.5 9.4E-05 2E-09 54.1 3.6 53 99-151 6-64 (337)
49 cd05114 PTKc_Tec_Rlk Catalytic 97.5 0.00012 2.7E-09 51.0 4.0 48 102-151 6-53 (256)
50 cd05090 PTKc_Ror1 Catalytic do 97.5 0.00018 3.8E-09 51.0 4.8 50 102-151 7-61 (283)
51 cd05073 PTKc_Hck Catalytic dom 97.5 0.00011 2.5E-09 51.4 3.7 50 100-151 6-55 (260)
52 KOG0580 Serine/threonine prote 97.5 5.9E-05 1.3E-09 52.2 2.2 52 100-151 22-76 (281)
53 cd05071 PTKc_Src Catalytic dom 97.5 9.1E-05 2E-09 52.0 3.2 48 102-151 8-55 (262)
54 KOG0593 Predicted protein kina 97.5 0.00016 3.4E-09 51.9 4.3 46 106-151 8-55 (396)
55 cd05072 PTKc_Lyn Catalytic dom 97.5 0.00012 2.6E-09 51.2 3.7 49 101-151 7-55 (261)
56 cd05109 PTKc_HER2 Catalytic do 97.5 0.0002 4.2E-09 50.7 4.7 51 101-151 8-63 (279)
57 KOG4236 Serine/threonine prote 97.5 0.0001 2.3E-09 56.5 3.3 46 105-151 569-617 (888)
58 PHA02988 hypothetical protein; 97.5 0.00019 4.2E-09 51.1 4.6 47 105-152 25-73 (283)
59 KOG0659 Cdk activating kinase 97.5 0.00011 2.5E-09 51.6 3.2 47 105-151 7-55 (318)
60 cd05631 STKc_GRK4 Catalytic do 97.5 0.00017 3.8E-09 51.3 4.2 50 102-151 2-54 (285)
61 cd07869 STKc_PFTAIRE1 Catalyti 97.4 0.00019 4.2E-09 51.5 4.2 52 100-151 5-57 (303)
62 cd05063 PTKc_EphR_A2 Catalytic 97.4 0.00029 6.2E-09 49.5 4.9 52 100-151 5-60 (268)
63 KOG1035 eIF-2alpha kinase GCN2 97.4 6.5E-05 1.4E-09 62.1 1.8 53 100-152 479-532 (1351)
64 KOG1006 Mitogen-activated prot 97.4 6.5E-05 1.4E-09 52.9 1.5 46 105-150 69-115 (361)
65 cd05050 PTKc_Musk Catalytic do 97.4 0.00024 5.2E-09 50.5 4.5 52 100-151 5-62 (288)
66 smart00179 EGF_CA Calcium-bind 97.4 0.00025 5.5E-09 34.7 3.3 31 9-41 1-33 (39)
67 cd07871 STKc_PCTAIRE3 Catalyti 97.4 0.00019 4.1E-09 51.2 3.9 51 101-151 6-57 (288)
68 cd05036 PTKc_ALK_LTK Catalytic 97.4 0.00021 4.6E-09 50.5 4.0 53 99-151 5-63 (277)
69 cd05112 PTKc_Itk Catalytic dom 97.4 0.00023 5.1E-09 49.5 4.2 48 102-151 6-53 (256)
70 cd05039 PTKc_Csk_like Catalyti 97.4 0.00031 6.7E-09 48.9 4.8 48 101-151 7-54 (256)
71 cd07853 STKc_NLK Catalytic dom 97.4 0.00038 8.3E-09 51.5 5.5 49 102-151 2-53 (372)
72 cd08224 STKc_Nek6_Nek7 Catalyt 97.4 0.00031 6.8E-09 49.1 4.7 51 101-151 3-56 (267)
73 cd06637 STKc_TNIK Catalytic do 97.4 0.00015 3.3E-09 50.9 3.0 52 98-151 4-56 (272)
74 cd05069 PTKc_Yes Catalytic dom 97.4 0.00024 5.1E-09 49.8 3.7 48 102-151 8-55 (260)
75 cd07872 STKc_PCTAIRE2 Catalyti 97.3 0.00022 4.8E-09 51.3 3.6 50 102-151 8-58 (309)
76 cd06610 STKc_OSR1_SPAK Catalyt 97.3 0.00046 1E-08 48.2 5.1 51 101-151 2-53 (267)
77 cd06619 PKc_MKK5 Catalytic dom 97.3 0.00047 1E-08 48.8 5.1 50 102-151 3-53 (279)
78 cd05626 STKc_LATS2 Catalytic d 97.3 0.00028 6E-09 52.5 4.1 50 102-151 3-55 (381)
79 cd06646 STKc_MAP4K5 Catalytic 97.3 0.00039 8.4E-09 48.8 4.6 50 101-151 10-60 (267)
80 cd05599 STKc_NDR_like Catalyti 97.3 0.00027 6E-09 52.0 3.9 51 101-151 2-55 (364)
81 cd06617 PKc_MKK3_6 Catalytic d 97.3 0.00048 1E-08 48.7 5.0 49 101-149 2-51 (283)
82 PLN03225 Serine/threonine-prot 97.3 0.00023 5E-09 55.8 3.5 37 98-134 130-171 (566)
83 cd06616 PKc_MKK4 Catalytic dom 97.3 0.00026 5.6E-09 50.3 3.5 47 105-151 9-56 (288)
84 cd07877 STKc_p38alpha_MAPK14 C 97.3 0.00053 1.2E-08 50.3 5.2 62 90-151 7-70 (345)
85 cd06649 PKc_MEK2 Catalytic dom 97.3 0.00046 1E-08 50.3 4.8 52 100-151 5-57 (331)
86 cd05091 PTKc_Ror2 Catalytic do 97.3 0.00025 5.3E-09 50.2 3.3 47 105-151 10-62 (283)
87 cd07849 STKc_ERK1_2_like Catal 97.3 0.0004 8.7E-09 50.6 4.5 52 100-151 5-57 (336)
88 cd08228 STKc_Nek6 Catalytic do 97.3 0.00059 1.3E-08 47.8 5.2 51 101-151 3-56 (267)
89 cd06641 STKc_MST3 Catalytic do 97.3 0.00057 1.2E-08 48.3 5.1 49 103-151 7-56 (277)
90 KOG0581 Mitogen-activated prot 97.3 0.00069 1.5E-08 49.4 5.4 47 105-151 84-131 (364)
91 cd05113 PTKc_Btk_Bmx Catalytic 97.3 0.00036 7.8E-09 48.8 3.9 46 104-151 8-53 (256)
92 cd06650 PKc_MEK1 Catalytic dom 97.3 0.0005 1.1E-08 50.2 4.8 52 100-151 5-57 (333)
93 cd05048 PTKc_Ror Catalytic Dom 97.3 0.00048 1E-08 48.7 4.6 50 102-151 7-62 (283)
94 cd06638 STKc_myosinIIIA Cataly 97.3 0.00024 5.1E-09 50.4 2.9 59 91-151 9-68 (286)
95 cd05632 STKc_GRK5 Catalytic do 97.3 0.00046 9.9E-09 49.1 4.4 48 104-151 4-54 (285)
96 KOG1024 Receptor-like protein 97.3 0.00019 4.1E-09 53.2 2.3 52 100-151 284-341 (563)
97 PTZ00283 serine/threonine prot 97.3 0.00034 7.5E-09 54.0 3.9 56 96-151 28-85 (496)
98 cd05059 PTKc_Tec_like Catalyti 97.3 0.00039 8.5E-09 48.5 3.9 48 102-151 6-53 (256)
99 TIGR01982 UbiB 2-polyprenylphe 97.2 0.00049 1.1E-08 52.3 4.6 33 105-137 122-154 (437)
100 cd05035 PTKc_Axl_like Catalyti 97.2 0.00064 1.4E-08 47.7 4.9 48 104-151 3-55 (273)
101 cd07870 STKc_PFTAIRE2 Catalyti 97.2 0.00032 7E-09 49.9 3.3 53 99-151 4-57 (291)
102 KOG0658 Glycogen synthase kina 97.2 0.00033 7.1E-09 51.0 3.3 36 102-137 26-62 (364)
103 cd06615 PKc_MEK Catalytic doma 97.2 0.00066 1.4E-08 48.9 4.9 51 101-151 2-53 (308)
104 KOG0600 Cdc2-related protein k 97.2 0.00019 4E-09 54.5 2.0 50 102-151 119-170 (560)
105 cd06620 PKc_MAPKK_Byr1_like Ca 97.2 0.00034 7.3E-09 49.6 3.3 47 105-151 10-57 (284)
106 cd05053 PTKc_FGFR Catalytic do 97.2 0.0005 1.1E-08 48.9 4.2 57 95-151 7-69 (293)
107 cd05066 PTKc_EphR_A Catalytic 97.2 0.00068 1.5E-08 47.6 4.8 50 102-151 6-59 (267)
108 cd06631 STKc_YSK4 Catalytic do 97.2 0.0009 2E-08 46.8 5.3 49 103-151 3-56 (265)
109 cd07844 STKc_PCTAIRE_like Cata 97.2 0.0004 8.7E-09 49.4 3.5 51 101-151 6-57 (291)
110 smart00219 TyrKc Tyrosine kina 97.2 0.001 2.2E-08 46.2 5.5 47 105-151 4-55 (258)
111 cd06622 PKc_MAPKK_PBS2_like Ca 97.2 0.00069 1.5E-08 48.0 4.7 47 105-151 6-53 (286)
112 cd05612 STKc_PRKX_like Catalyt 97.2 0.0006 1.3E-08 48.7 4.4 51 101-151 2-55 (291)
113 KOG0200 Fibroblast/platelet-de 97.2 0.00048 1E-08 54.5 4.1 58 94-151 290-355 (609)
114 cd05074 PTKc_Tyro3 Catalytic d 97.2 0.00077 1.7E-08 47.4 4.8 46 105-151 4-55 (273)
115 KOG4250 TANK binding protein k 97.2 0.00015 3.3E-09 56.8 1.3 48 104-151 17-65 (732)
116 cd06639 STKc_myosinIIIB Cataly 97.2 0.00048 1E-08 49.0 3.8 59 90-150 12-71 (291)
117 cd05032 PTKc_InsR_like Catalyt 97.2 0.00052 1.1E-08 48.3 4.0 51 101-151 7-63 (277)
118 cd05038 PTKc_Jak_rpt2 Catalyti 97.2 0.00082 1.8E-08 47.4 5.0 48 104-151 8-60 (284)
119 cd05065 PTKc_EphR_B Catalytic 97.2 0.00063 1.4E-08 47.8 4.3 49 103-151 7-59 (269)
120 cd05045 PTKc_RET Catalytic dom 97.2 0.00096 2.1E-08 47.5 5.3 49 103-151 3-57 (290)
121 PF03109 ABC1: ABC1 family; I 97.2 0.00016 3.5E-09 45.1 1.2 33 105-137 16-48 (119)
122 cd05055 PTKc_PDGFR Catalytic d 97.2 0.0005 1.1E-08 49.4 3.8 54 98-151 33-92 (302)
123 cd05056 PTKc_FAK Catalytic dom 97.2 0.00069 1.5E-08 47.6 4.5 50 102-151 8-61 (270)
124 cd05600 STKc_Sid2p_Dbf2p Catal 97.2 0.00054 1.2E-08 49.9 4.0 50 102-151 3-55 (333)
125 cd06632 STKc_MEKK1_plant Catal 97.2 0.00091 2E-08 46.4 5.0 49 103-151 3-56 (258)
126 cd05052 PTKc_Abl Catalytic dom 97.2 0.00048 1E-08 48.3 3.6 49 101-151 7-56 (263)
127 cd05075 PTKc_Axl Catalytic dom 97.2 0.001 2.2E-08 46.7 5.2 47 105-151 4-54 (272)
128 cd06611 STKc_SLK_like Catalyti 97.2 0.00045 9.7E-09 48.8 3.4 50 101-151 6-56 (280)
129 cd07879 STKc_p38delta_MAPK13 C 97.2 0.00077 1.7E-08 49.3 4.7 52 100-151 15-68 (342)
130 cd06636 STKc_MAP4K4_6 Catalyti 97.2 0.00091 2E-08 47.3 5.0 59 90-150 6-65 (282)
131 cd05093 PTKc_TrkB Catalytic do 97.2 0.00072 1.6E-08 48.1 4.4 50 101-151 6-61 (288)
132 KOG0597 Serine-threonine prote 97.2 0.00037 8E-09 54.0 3.0 48 104-151 6-55 (808)
133 cd05089 PTKc_Tie1 Catalytic do 97.1 0.00089 1.9E-08 47.9 4.9 51 101-151 3-56 (297)
134 cd07878 STKc_p38beta_MAPK11 Ca 97.1 0.0011 2.4E-08 48.4 5.4 53 99-151 14-68 (343)
135 cd05605 STKc_GRK4_like Catalyt 97.1 0.00071 1.5E-08 48.2 4.3 49 103-151 3-54 (285)
136 KOG0594 Protein kinase PCTAIRE 97.1 0.00032 7E-09 50.7 2.5 46 106-151 17-64 (323)
137 cd05088 PTKc_Tie2 Catalytic do 97.1 0.00088 1.9E-08 48.1 4.8 51 101-151 8-61 (303)
138 cd05095 PTKc_DDR2 Catalytic do 97.1 0.00066 1.4E-08 48.5 4.1 52 100-151 5-73 (296)
139 cd05625 STKc_LATS1 Catalytic d 97.1 0.0006 1.3E-08 50.6 4.0 50 102-151 3-55 (382)
140 cd07848 STKc_CDKL5 Catalytic d 97.1 0.00062 1.3E-08 48.3 3.9 50 102-151 3-54 (287)
141 KOG0577 Serine/threonine prote 97.1 0.00039 8.4E-09 54.2 2.9 50 102-151 28-80 (948)
142 KOG0662 Cyclin-dependent kinas 97.1 0.00032 7E-09 46.8 2.2 48 104-151 6-55 (292)
143 PTZ00263 protein kinase A cata 97.1 0.00051 1.1E-08 50.0 3.5 51 101-151 19-72 (329)
144 cd06618 PKc_MKK7 Catalytic dom 97.1 0.00088 1.9E-08 47.8 4.6 51 100-150 15-66 (296)
145 cd06605 PKc_MAPKK Catalytic do 97.1 0.00067 1.5E-08 47.4 3.9 50 102-151 3-53 (265)
146 cd07836 STKc_Pho85 Catalytic d 97.1 0.00074 1.6E-08 47.7 4.1 50 102-151 2-52 (284)
147 cd05051 PTKc_DDR Catalytic dom 97.1 0.001 2.3E-08 47.3 4.9 51 101-151 6-73 (296)
148 cd05097 PTKc_DDR_like Catalyti 97.1 0.00079 1.7E-08 48.1 4.3 51 101-151 6-71 (295)
149 cd05629 STKc_NDR_like_fungal C 97.1 0.00076 1.6E-08 50.0 4.3 51 101-151 2-55 (377)
150 cd07837 STKc_CdkB_plant Cataly 97.1 0.00056 1.2E-08 48.7 3.5 51 101-151 2-54 (295)
151 cd06917 STKc_NAK1_like Catalyt 97.1 0.00085 1.8E-08 47.3 4.4 49 103-151 4-53 (277)
152 cd05615 STKc_cPKC_alpha Cataly 97.1 0.00077 1.7E-08 49.0 4.1 50 102-151 2-54 (323)
153 cd05587 STKc_cPKC Catalytic do 97.1 0.00079 1.7E-08 48.9 4.2 50 102-151 2-54 (324)
154 cd05057 PTKc_EGFR_like Catalyt 97.1 0.00098 2.1E-08 47.1 4.5 50 102-151 9-63 (279)
155 cd06642 STKc_STK25-YSK1 Cataly 97.1 0.00054 1.2E-08 48.4 3.2 47 105-151 9-56 (277)
156 cd05628 STKc_NDR1 Catalytic do 97.1 0.00081 1.8E-08 49.6 4.2 51 101-151 2-55 (363)
157 cd07868 STKc_CDK8 Catalytic do 97.1 0.00094 2E-08 48.1 4.4 44 105-151 6-52 (317)
158 cd05092 PTKc_TrkA Catalytic do 97.1 0.001 2.2E-08 47.1 4.5 50 101-151 6-61 (280)
159 cd05079 PTKc_Jak1_rpt2 Catalyt 97.1 0.0012 2.7E-08 46.8 4.9 49 103-151 7-60 (284)
160 cd05080 PTKc_Tyk2_rpt2 Catalyt 97.1 0.0013 2.8E-08 46.6 5.0 48 104-151 8-60 (283)
161 cd07846 STKc_CDKL2_3 Catalytic 97.0 0.00092 2E-08 47.3 4.1 50 102-151 3-54 (286)
162 cd05597 STKc_DMPK_like Catalyt 97.0 0.00094 2E-08 48.7 4.2 50 102-151 3-55 (331)
163 cd07873 STKc_PCTAIRE1 Catalyti 97.0 0.00082 1.8E-08 48.1 3.8 50 102-151 8-58 (301)
164 cd05573 STKc_ROCK_NDR_like Cat 97.0 0.0007 1.5E-08 49.5 3.5 51 101-151 2-55 (350)
165 PF14670 FXa_inhibition: Coagu 97.0 0.00038 8.3E-09 33.7 1.4 25 20-44 7-31 (36)
166 cd06652 STKc_MEKK2 Catalytic d 97.0 0.0014 3.1E-08 45.8 4.9 51 101-151 3-58 (265)
167 cd06644 STKc_STK10_LOK Catalyt 97.0 0.001 2.2E-08 47.4 4.1 49 102-151 14-63 (292)
168 cd05601 STKc_CRIK Catalytic do 97.0 0.00098 2.1E-08 48.4 4.1 51 101-151 2-55 (330)
169 cd05101 PTKc_FGFR2 Catalytic d 97.0 0.00084 1.8E-08 48.1 3.7 52 100-151 15-74 (304)
170 cd07867 STKc_CDC2L6 Catalytic 97.0 0.0012 2.5E-08 47.6 4.4 44 105-151 6-52 (317)
171 cd07859 STKc_TDY_MAPK_plant Ca 97.0 0.001 2.2E-08 48.3 4.2 49 103-151 3-53 (338)
172 KOG0591 NIMA (never in mitosis 97.0 0.00021 4.6E-09 50.8 0.5 48 105-152 24-73 (375)
173 cd07864 STKc_CDK12 Catalytic d 97.0 0.0011 2.3E-08 47.4 4.1 54 98-151 5-60 (302)
174 cd05596 STKc_ROCK Catalytic do 97.0 0.0006 1.3E-08 50.6 2.9 55 97-151 40-97 (370)
175 cd05046 PTK_CCK4 Pseudokinase 97.0 0.0014 3E-08 46.2 4.6 52 100-151 5-62 (275)
176 cd06612 STKc_MST1_2 Catalytic 97.0 0.001 2.3E-08 46.1 3.9 49 100-151 3-52 (256)
177 PTZ00036 glycogen synthase kin 97.0 0.0008 1.7E-08 51.1 3.5 35 100-134 66-101 (440)
178 cd06656 STKc_PAK3 Catalytic do 97.0 0.0015 3.1E-08 46.9 4.7 50 101-151 20-70 (297)
179 cd05099 PTKc_FGFR4 Catalytic d 97.0 0.0011 2.3E-08 47.9 4.0 54 98-151 10-71 (314)
180 KOG0663 Protein kinase PITSLRE 97.0 0.00037 7.9E-09 50.6 1.5 51 101-151 77-129 (419)
181 cd05110 PTKc_HER4 Catalytic do 97.0 0.0015 3.2E-08 46.9 4.6 50 102-151 9-63 (303)
182 cd06623 PKc_MAPKK_plant_like C 97.0 0.0017 3.7E-08 45.2 4.9 51 101-151 2-53 (264)
183 cd08229 STKc_Nek7 Catalytic do 97.0 0.0012 2.6E-08 46.2 4.1 50 102-151 4-56 (267)
184 KOG0198 MEKK and related serin 96.9 0.0012 2.6E-08 47.9 4.0 50 102-152 19-69 (313)
185 cd05598 STKc_LATS Catalytic do 96.9 0.0012 2.7E-08 48.9 4.2 50 102-151 3-55 (376)
186 cd05621 STKc_ROCK2 Catalytic d 96.9 0.001 2.2E-08 49.4 3.7 57 95-151 38-97 (370)
187 cd05083 PTKc_Chk Catalytic dom 96.9 0.00098 2.1E-08 46.4 3.4 46 102-151 8-53 (254)
188 cd07854 STKc_MAPK4_6 Catalytic 96.9 0.0013 2.9E-08 48.1 4.2 50 101-151 6-56 (342)
189 cd05122 PKc_STE Catalytic doma 96.9 0.0022 4.7E-08 44.1 5.0 48 103-151 3-51 (253)
190 cd05144 RIO2_C RIO kinase fami 96.9 0.0013 2.8E-08 44.4 3.8 33 102-134 17-49 (198)
191 cd06609 STKc_MST3_like Catalyt 96.9 0.0013 2.8E-08 46.3 3.9 49 103-151 4-53 (274)
192 cd06651 STKc_MEKK3 Catalytic d 96.9 0.0023 4.9E-08 44.9 5.2 51 101-151 3-58 (266)
193 cd06640 STKc_MST4 Catalytic do 96.9 0.0014 3E-08 46.3 4.1 48 104-151 8-56 (277)
194 cd05622 STKc_ROCK1 Catalytic d 96.9 0.0014 2.9E-08 48.7 4.1 60 92-151 35-97 (371)
195 cd06621 PKc_MAPKK_Pek1_like Ca 96.9 0.0017 3.7E-08 46.2 4.5 51 101-151 2-53 (287)
196 cd05624 STKc_MRCK_beta Catalyt 96.9 0.0015 3.3E-08 47.6 4.3 51 101-151 2-55 (331)
197 cd07876 STKc_JNK2 Catalytic do 96.9 0.0016 3.5E-08 47.9 4.5 52 100-151 21-74 (359)
198 cd05082 PTKc_Csk Catalytic dom 96.9 0.0018 3.8E-08 45.2 4.4 47 101-151 7-53 (256)
199 KOG0575 Polo-like serine/threo 96.9 0.0014 3E-08 50.7 4.0 51 101-151 19-72 (592)
200 cd05111 PTK_HER3 Pseudokinase 96.9 0.0022 4.7E-08 45.5 4.8 50 102-151 9-63 (279)
201 cd07862 STKc_CDK6 Catalytic do 96.9 0.0018 3.9E-08 46.0 4.4 49 102-150 3-54 (290)
202 cd05623 STKc_MRCK_alpha Cataly 96.9 0.0017 3.7E-08 47.3 4.3 51 101-151 2-55 (332)
203 cd06606 STKc_MAPKKK Catalytic 96.9 0.0023 4.9E-08 44.2 4.7 49 102-151 2-53 (260)
204 cd06626 STKc_MEKK4 Catalytic d 96.8 0.0023 4.9E-08 44.6 4.7 49 103-151 3-53 (264)
205 PF12947 EGF_3: EGF domain; I 96.8 0.00052 1.1E-08 33.3 1.0 23 22-44 11-33 (36)
206 cd05098 PTKc_FGFR1 Catalytic d 96.8 0.0013 2.9E-08 47.2 3.6 52 100-151 18-77 (307)
207 cd06645 STKc_MAP4K3 Catalytic 96.8 0.001 2.2E-08 46.6 2.9 49 102-151 11-60 (267)
208 cd08529 STKc_FA2-like Catalyti 96.8 0.0025 5.5E-08 44.2 4.8 49 102-151 2-53 (256)
209 cd07841 STKc_CDK7 Catalytic do 96.8 0.0024 5.1E-08 45.6 4.7 50 102-151 2-56 (298)
210 cd06629 STKc_MAPKKK_Bck1_like 96.8 0.002 4.4E-08 45.2 4.3 31 104-134 5-36 (272)
211 PRK13184 pknD serine/threonine 96.8 0.0021 4.6E-08 52.9 4.9 50 102-151 4-56 (932)
212 cd06647 STKc_PAK_I Catalytic d 96.8 0.0027 5.8E-08 45.4 5.0 50 101-151 20-70 (293)
213 cd05630 STKc_GRK6 Catalytic do 96.8 0.0027 5.8E-08 45.2 4.9 50 102-151 2-54 (285)
214 cd06657 STKc_PAK4 Catalytic do 96.8 0.0021 4.6E-08 45.9 4.4 44 107-151 27-71 (292)
215 cd05627 STKc_NDR2 Catalytic do 96.8 0.0018 3.9E-08 47.8 4.1 51 101-151 2-55 (360)
216 cd06607 STKc_TAO Catalytic dom 96.8 0.0025 5.4E-08 45.8 4.7 51 101-151 16-69 (307)
217 cd07832 STKc_CCRK Catalytic do 96.8 0.0024 5.1E-08 45.2 4.6 48 104-151 4-53 (286)
218 cd07880 STKc_p38gamma_MAPK12 C 96.8 0.0027 5.9E-08 46.5 5.0 53 99-151 14-68 (343)
219 PF00008 EGF: EGF-like domain 96.8 0.00055 1.2E-08 32.3 0.8 24 20-43 5-31 (32)
220 cd06643 STKc_SLK Catalytic dom 96.8 0.0024 5.2E-08 45.2 4.5 45 106-151 11-56 (282)
221 cd05616 STKc_cPKC_beta Catalyt 96.8 0.0024 5.2E-08 46.3 4.5 33 102-134 2-35 (323)
222 cd07860 STKc_CDK2_3 Catalytic 96.8 0.0023 5E-08 45.2 4.4 50 102-151 2-53 (284)
223 KOG1214 Nidogen and related ba 96.8 0.0012 2.7E-08 52.9 3.1 39 5-44 820-860 (1289)
224 KOG0667 Dual-specificity tyros 96.8 0.0025 5.5E-08 49.6 4.7 45 105-151 191-236 (586)
225 KOG0574 STE20-like serine/thre 96.8 0.00035 7.6E-09 50.2 0.1 47 102-151 35-82 (502)
226 cd05100 PTKc_FGFR3 Catalytic d 96.8 0.0021 4.5E-08 46.8 4.1 51 101-151 13-71 (334)
227 cd06630 STKc_MEKK1 Catalytic d 96.8 0.0039 8.4E-08 43.6 5.3 50 102-151 2-57 (268)
228 cd06608 STKc_myosinIII_like Ca 96.7 0.0021 4.5E-08 45.0 3.9 52 98-151 4-56 (275)
229 cd06627 STKc_Cdc7_like Catalyt 96.7 0.0037 8.1E-08 43.2 5.1 49 103-151 3-53 (254)
230 cd07840 STKc_CDK9_like Catalyt 96.7 0.0025 5.3E-08 45.0 4.2 47 105-151 4-52 (287)
231 cd07830 STKc_MAK_like Catalyti 96.7 0.003 6.4E-08 44.6 4.6 31 105-135 4-35 (283)
232 cd06653 STKc_MEKK3_like_1 Cata 96.7 0.0032 7E-08 44.1 4.7 51 101-151 3-58 (264)
233 cd00054 EGF_CA Calcium-binding 96.7 0.0023 5E-08 30.8 2.8 32 10-43 2-35 (38)
234 cd06614 STKc_PAK Catalytic dom 96.7 0.0025 5.4E-08 45.2 4.0 52 98-151 17-69 (286)
235 cd06635 STKc_TAO1 Catalytic do 96.7 0.003 6.4E-08 45.7 4.5 50 102-151 27-79 (317)
236 cd07875 STKc_JNK1 Catalytic do 96.7 0.0032 6.9E-08 46.5 4.6 52 100-151 24-77 (364)
237 cd07856 STKc_Sty1_Hog1 Catalyt 96.7 0.0019 4E-08 47.1 3.3 57 95-151 5-63 (328)
238 PTZ00426 cAMP-dependent protei 96.7 0.0017 3.8E-08 47.6 3.1 51 101-151 31-85 (340)
239 cd07835 STKc_CDK1_like Catalyt 96.7 0.0032 7E-08 44.5 4.4 47 105-151 4-52 (283)
240 cd07847 STKc_CDKL1_4 Catalytic 96.7 0.0025 5.4E-08 45.0 3.8 50 102-151 3-54 (286)
241 cd08225 STKc_Nek5 Catalytic do 96.7 0.003 6.5E-08 43.9 4.2 50 102-151 2-53 (257)
242 cd08219 STKc_Nek3 Catalytic do 96.7 0.0038 8.2E-08 43.4 4.7 49 103-151 3-52 (255)
243 cd05094 PTKc_TrkC Catalytic do 96.7 0.0033 7.2E-08 44.8 4.4 49 102-151 7-61 (291)
244 cd06613 STKc_MAP4K3_like Catal 96.6 0.003 6.5E-08 44.0 4.1 51 100-151 3-54 (262)
245 KOG1989 ARK protein kinase fam 96.6 0.0032 7E-08 50.4 4.6 46 105-151 42-88 (738)
246 smart00221 STYKc Protein kinas 96.6 0.0053 1.2E-07 41.5 5.2 47 104-151 3-51 (225)
247 cd07833 STKc_CDKL Catalytic do 96.6 0.0023 4.9E-08 45.3 3.5 50 102-151 3-54 (288)
248 cd06654 STKc_PAK1 Catalytic do 96.6 0.0038 8.2E-08 44.7 4.6 50 101-151 21-71 (296)
249 smart00090 RIO RIO-like kinase 96.6 0.0059 1.3E-07 42.7 5.4 33 102-134 30-64 (237)
250 cd05589 STKc_PKN Catalytic dom 96.6 0.003 6.4E-08 45.9 4.1 46 105-150 4-52 (324)
251 PLN00009 cyclin-dependent kina 96.6 0.0026 5.6E-08 45.3 3.7 51 101-151 3-55 (294)
252 cd07874 STKc_JNK3 Catalytic do 96.6 0.0036 7.8E-08 46.0 4.5 53 99-151 16-70 (355)
253 cd07863 STKc_CDK4 Catalytic do 96.6 0.0029 6.3E-08 44.8 3.9 32 103-134 3-35 (288)
254 cd06659 STKc_PAK6 Catalytic do 96.6 0.0029 6.3E-08 45.3 3.7 45 106-151 27-72 (297)
255 cd07842 STKc_CDK8_like Catalyt 96.6 0.0036 7.7E-08 44.9 4.1 48 103-151 3-56 (316)
256 KOG0661 MAPK related serine/th 96.6 0.001 2.3E-08 50.3 1.3 30 106-135 16-46 (538)
257 PRK04750 ubiB putative ubiquin 96.6 0.0045 9.7E-08 48.3 4.8 35 101-136 121-156 (537)
258 KOG0032 Ca2+/calmodulin-depend 96.6 0.0027 5.9E-08 47.5 3.5 50 102-151 37-89 (382)
259 cd08217 STKc_Nek2 Catalytic do 96.6 0.0056 1.2E-07 42.5 5.0 48 104-151 4-53 (265)
260 cd05614 STKc_MSK2_N N-terminal 96.5 0.0038 8.2E-08 45.4 4.2 50 102-151 2-58 (332)
261 cd07831 STKc_MOK Catalytic dom 96.5 0.0042 9.1E-08 43.8 4.3 46 105-150 4-50 (282)
262 cd08528 STKc_Nek10 Catalytic d 96.5 0.005 1.1E-07 43.2 4.6 33 102-134 2-36 (269)
263 cd05581 STKc_PDK1 Catalytic do 96.5 0.0054 1.2E-07 43.1 4.8 50 102-151 3-55 (280)
264 cd06655 STKc_PAK2 Catalytic do 96.5 0.0037 7.9E-08 44.8 4.0 50 101-151 20-70 (296)
265 cd06658 STKc_PAK5 Catalytic do 96.5 0.0044 9.5E-08 44.3 4.3 45 106-151 28-73 (292)
266 cd07838 STKc_CDK4_6_like Catal 96.5 0.0051 1.1E-07 43.4 4.6 47 104-150 3-51 (287)
267 cd07861 STKc_CDK1_euk Catalyti 96.5 0.0046 1E-07 43.7 4.4 49 103-151 3-53 (285)
268 cd05613 STKc_MSK1_N N-terminal 96.5 0.0045 9.7E-08 44.0 4.4 49 103-151 3-58 (290)
269 cd07845 STKc_CDK10 Catalytic d 96.5 0.0032 7E-08 45.2 3.5 52 100-151 7-60 (309)
270 cd05574 STKc_phototropin_like 96.5 0.0053 1.1E-07 44.2 4.5 51 101-151 2-55 (316)
271 cd07834 STKc_MAPK Catalytic do 96.4 0.0062 1.3E-07 44.1 4.7 49 103-151 3-53 (330)
272 KOG0605 NDR and related serine 96.4 0.0047 1E-07 47.4 4.1 37 100-136 141-178 (550)
273 cd08218 STKc_Nek1 Catalytic do 96.4 0.0067 1.5E-07 42.2 4.7 49 102-151 2-53 (256)
274 cd07858 STKc_TEY_MAPK_plant Ca 96.4 0.005 1.1E-07 44.9 4.1 50 101-151 6-58 (337)
275 cd08220 STKc_Nek8 Catalytic do 96.4 0.0078 1.7E-07 41.7 5.0 50 102-151 2-53 (256)
276 cd05580 STKc_PKA Catalytic dom 96.4 0.0049 1.1E-07 43.9 3.9 50 102-151 3-55 (290)
277 cd06648 STKc_PAK_II Catalytic 96.4 0.0071 1.5E-07 43.0 4.7 49 102-151 21-70 (285)
278 cd06625 STKc_MEKK3_like Cataly 96.4 0.0078 1.7E-07 41.9 4.9 52 100-151 2-58 (263)
279 cd07839 STKc_CDK5 Catalytic do 96.4 0.0041 8.8E-08 44.0 3.4 49 103-151 3-53 (284)
280 PHA03212 serine/threonine kina 96.4 0.0045 9.8E-08 46.4 3.7 45 100-151 92-137 (391)
281 cd07855 STKc_ERK5 Catalytic do 96.3 0.0064 1.4E-07 44.3 4.3 52 100-151 5-58 (334)
282 cd07852 STKc_MAPK15 Catalytic 96.3 0.0041 9E-08 45.3 3.3 50 101-151 8-60 (337)
283 PRK10345 hypothetical protein; 96.3 0.0079 1.7E-07 41.3 4.4 47 102-151 4-50 (210)
284 cd07843 STKc_CDC2L1 Catalytic 96.3 0.0045 9.7E-08 44.1 3.4 51 101-151 6-58 (293)
285 cd07850 STKc_JNK Catalytic dom 96.3 0.008 1.7E-07 44.2 4.7 52 100-151 16-69 (353)
286 cd05578 STKc_Yank1 Catalytic d 96.3 0.0078 1.7E-07 41.9 4.5 50 102-151 2-54 (258)
287 cd07866 STKc_BUR1 Catalytic do 96.3 0.0041 9E-08 44.5 3.1 52 100-151 8-61 (311)
288 PF00069 Pkinase: Protein kina 96.3 0.011 2.3E-07 41.1 5.1 46 105-150 4-51 (260)
289 cd08215 STKc_Nek Catalytic dom 96.3 0.0098 2.1E-07 41.1 4.8 50 102-151 2-53 (258)
290 cd06633 STKc_TAO3 Catalytic do 96.2 0.01 2.2E-07 42.9 4.9 47 105-151 26-75 (313)
291 PTZ00024 cyclin-dependent prot 96.2 0.0062 1.3E-07 44.3 3.8 31 105-135 14-45 (335)
292 cd05610 STKc_MASTL Catalytic d 96.2 0.0072 1.6E-07 48.5 4.2 51 101-151 5-58 (669)
293 cd07865 STKc_CDK9 Catalytic do 96.2 0.007 1.5E-07 43.2 3.8 51 101-151 13-65 (310)
294 cd05583 STKc_MSK_N N-terminal 96.2 0.0089 1.9E-07 42.4 4.2 48 104-151 4-58 (288)
295 cd05609 STKc_MAST Catalytic do 96.2 0.01 2.2E-07 42.6 4.6 51 101-151 2-55 (305)
296 KOG0582 Ste20-like serine/thre 96.1 0.0086 1.9E-07 45.2 3.9 53 100-152 26-79 (516)
297 PHA03211 serine/threonine kina 96.1 0.0063 1.4E-07 46.7 3.4 33 101-133 170-203 (461)
298 cd07829 STKc_CDK_like Catalyti 96.1 0.0095 2.1E-07 41.9 4.1 47 105-151 4-52 (282)
299 cd07851 STKc_p38 Catalytic dom 96.1 0.011 2.4E-07 43.3 4.5 52 99-151 14-68 (343)
300 cd06634 STKc_TAO2 Catalytic do 96.1 0.0078 1.7E-07 43.3 3.6 50 102-151 17-69 (308)
301 cd07857 STKc_MPK1 Catalytic do 96.1 0.012 2.7E-07 42.8 4.6 50 102-151 2-55 (332)
302 cd08221 STKc_Nek9 Catalytic do 96.0 0.016 3.5E-07 40.2 4.9 49 102-151 2-53 (256)
303 cd00053 EGF Epidermal growth f 96.0 0.011 2.4E-07 27.8 2.8 25 19-43 6-32 (36)
304 cd08530 STKc_CNK2-like Catalyt 96.0 0.016 3.4E-07 40.1 4.7 50 102-151 2-53 (256)
305 cd08223 STKc_Nek4 Catalytic do 96.0 0.016 3.5E-07 40.2 4.7 49 103-151 3-53 (257)
306 KOG0694 Serine/threonine prote 95.9 0.011 2.4E-07 46.7 3.8 52 100-151 368-422 (694)
307 cd05118 STKc_CMGC Catalytic do 95.8 0.02 4.4E-07 40.3 4.8 47 105-151 4-52 (283)
308 PF12955 DUF3844: Domain of un 95.8 0.013 2.9E-07 35.3 3.2 32 10-42 5-43 (103)
309 PHA02882 putative serine/threo 95.8 0.0092 2E-07 42.7 2.8 32 101-132 13-48 (294)
310 COG0661 AarF Predicted unusual 95.7 0.013 2.9E-07 45.5 3.7 33 106-138 131-163 (517)
311 KOG0660 Mitogen-activated prot 95.7 0.013 2.9E-07 42.8 3.5 49 102-151 24-75 (359)
312 PHA03209 serine/threonine kina 95.7 0.013 2.7E-07 43.3 3.5 35 100-134 66-101 (357)
313 KOG0611 Predicted serine/threo 95.7 0.0054 1.2E-07 46.1 1.4 47 106-152 59-108 (668)
314 PTZ00266 NIMA-related protein 95.7 0.015 3.2E-07 48.6 3.9 55 97-151 10-66 (1021)
315 cd06628 STKc_MAPKKK_Byr2_like 95.6 0.03 6.4E-07 39.1 5.0 48 104-151 4-60 (267)
316 KOG0598 Ribosomal protein S6 k 95.6 0.01 2.3E-07 43.4 2.6 52 100-151 25-79 (357)
317 PF12662 cEGF: Complement Clr- 95.5 0.015 3.3E-07 25.4 1.9 20 31-50 1-21 (24)
318 PTZ00267 NIMA-related protein 95.4 0.027 5.9E-07 43.4 4.5 49 102-151 69-119 (478)
319 PTZ00382 Variant-specific surf 95.4 0.016 3.4E-07 34.7 2.4 10 35-44 41-50 (96)
320 KOG4260 Uncharacterized conser 95.3 0.01 2.2E-07 41.8 1.6 36 7-43 233-270 (350)
321 KOG0615 Serine/threonine prote 95.1 0.028 6E-07 42.2 3.5 47 105-151 177-230 (475)
322 KOG0579 Ste20-like serine/thre 95.1 0.005 1.1E-07 48.8 -0.4 45 107-152 39-84 (1187)
323 PRK09605 bifunctional UGMP fam 95.1 0.034 7.4E-07 43.5 4.1 48 103-151 336-390 (535)
324 KOG1163 Casein kinase (serine/ 95.0 0.028 6E-07 39.6 3.0 33 104-136 19-52 (341)
325 PF01102 Glycophorin_A: Glycop 95.0 0.014 2.9E-07 36.5 1.4 16 53-68 66-81 (122)
326 smart00181 EGF Epidermal growt 95.0 0.037 8E-07 26.1 2.7 25 19-43 6-31 (35)
327 KOG0583 Serine/threonine prote 94.9 0.04 8.7E-07 41.2 3.8 34 101-134 18-52 (370)
328 KOG0983 Mitogen-activated prot 94.7 0.07 1.5E-06 38.3 4.4 45 106-150 98-143 (391)
329 KOG1167 Serine/threonine prote 94.6 0.024 5.2E-07 42.3 2.0 51 98-151 34-88 (418)
330 KOG1027 Serine/threonine prote 94.6 0.013 2.8E-07 47.4 0.7 32 102-134 511-543 (903)
331 KOG0664 Nemo-like MAPK-related 94.5 0.027 5.9E-07 40.3 2.1 49 102-151 55-106 (449)
332 COG2112 Predicted Ser/Thr prot 94.4 0.082 1.8E-06 35.5 4.1 42 106-151 28-69 (201)
333 KOG0984 Mitogen-activated prot 94.4 0.035 7.7E-07 38.2 2.4 46 105-150 51-97 (282)
334 KOG1166 Mitotic checkpoint ser 94.3 0.023 4.9E-07 47.2 1.5 34 101-134 699-732 (974)
335 KOG4721 Serine/threonine prote 94.3 0.015 3.3E-07 45.6 0.5 34 105-139 129-162 (904)
336 PF02439 Adeno_E3_CR2: Adenovi 94.0 0.069 1.5E-06 25.9 2.2 27 54-80 6-32 (38)
337 cd08226 PK_STRAD_beta Pseudoki 93.9 0.13 2.7E-06 37.4 4.7 43 109-151 9-53 (328)
338 KOG0607 MAP kinase-interacting 93.9 0.032 7E-07 40.8 1.5 55 91-151 74-129 (463)
339 PHA03210 serine/threonine kina 93.8 0.029 6.3E-07 43.5 1.3 22 100-121 148-169 (501)
340 KOG4258 Insulin/growth factor 93.8 0.0094 2E-07 48.2 -1.5 32 90-122 985-1016(1025)
341 PRK10359 lipopolysaccharide co 93.8 0.095 2E-06 36.6 3.6 36 100-136 31-66 (232)
342 cd08222 STKc_Nek11 Catalytic d 93.6 0.14 3.1E-06 35.6 4.3 31 103-133 3-34 (260)
343 KOG0585 Ca2+/calmodulin-depend 93.6 0.12 2.6E-06 39.7 4.0 37 98-134 95-132 (576)
344 KOG1219 Uncharacterized conser 93.5 0.15 3.2E-06 46.2 4.9 27 18-44 3908-3936(4289)
345 KOG1164 Casein kinase (serine/ 93.4 0.075 1.6E-06 38.8 2.7 35 101-135 19-55 (322)
346 PF12273 RCR: Chitin synthesis 93.2 0.13 2.8E-06 32.6 3.2 14 68-81 16-29 (130)
347 KOG1165 Casein kinase (serine/ 93.1 0.15 3.3E-06 37.6 3.8 33 101-133 29-62 (449)
348 cd08227 PK_STRAD_alpha Pseudok 93.0 0.2 4.2E-06 36.4 4.5 43 109-151 9-53 (327)
349 KOG0578 p21-activated serine/t 93.0 0.12 2.5E-06 40.2 3.3 50 102-152 275-325 (550)
350 KOG4279 Serine/threonine prote 92.9 0.14 3E-06 41.5 3.6 42 107-149 582-624 (1226)
351 PF01102 Glycophorin_A: Glycop 92.8 0.15 3.2E-06 31.9 3.0 31 54-84 64-94 (122)
352 PF07204 Orthoreo_P10: Orthore 92.8 0.23 5E-06 29.2 3.5 69 30-99 17-85 (98)
353 KOG0586 Serine/threonine prote 92.8 0.19 4E-06 39.5 4.1 52 100-151 56-109 (596)
354 KOG0587 Traf2- and Nck-interac 92.4 0.13 2.9E-06 42.1 3.0 47 93-139 12-59 (953)
355 KOG0596 Dual specificity; seri 92.3 0.076 1.6E-06 41.5 1.4 46 105-151 366-413 (677)
356 PF12191 stn_TNFRSF12A: Tumour 92.2 0.055 1.2E-06 33.6 0.6 13 69-81 94-106 (129)
357 PF01034 Syndecan: Syndecan do 92.2 0.03 6.5E-07 30.6 -0.5 27 54-80 12-38 (64)
358 PF15102 TMEM154: TMEM154 prot 92.1 0.066 1.4E-06 34.3 0.8 7 54-60 59-65 (146)
359 PF07974 EGF_2: EGF-like domai 92.0 0.27 5.9E-06 23.0 2.7 21 22-44 11-31 (32)
360 PHA03207 serine/threonine kina 91.9 0.3 6.5E-06 36.6 4.3 33 102-134 94-129 (392)
361 PF14575 EphA2_TM: Ephrin type 91.5 0.063 1.4E-06 30.6 0.3 14 89-102 56-69 (75)
362 cd08216 PK_STRAD Pseudokinase 91.4 0.34 7.3E-06 34.8 4.0 44 106-151 8-53 (314)
363 KOG2345 Serine/threonine prote 91.4 0.17 3.8E-06 35.8 2.3 47 102-149 23-70 (302)
364 PF08693 SKG6: Transmembrane a 91.3 0.073 1.6E-06 26.2 0.4 18 54-71 11-28 (40)
365 KOG0612 Rho-associated, coiled 91.3 0.062 1.3E-06 45.2 0.1 59 93-151 68-129 (1317)
366 KOG0592 3-phosphoinositide-dep 91.3 0.11 2.4E-06 40.4 1.3 36 98-133 71-107 (604)
367 KOG0986 G protein-coupled rece 90.9 0.072 1.6E-06 40.7 0.1 44 90-133 174-219 (591)
368 PHA03390 pk1 serine/threonine- 90.9 0.78 1.7E-05 32.2 5.4 28 108-135 24-52 (267)
369 KOG0670 U4/U6-associated splic 90.8 0.3 6.5E-06 38.2 3.3 42 108-151 440-482 (752)
370 KOG0666 Cyclin C-dependent kin 90.7 0.13 2.8E-06 37.7 1.2 31 105-135 29-64 (438)
371 KOG1345 Serine/threonine kinas 90.5 0.2 4.3E-06 36.0 2.0 46 101-148 25-71 (378)
372 PHA02887 EGF-like protein; Pro 90.4 0.24 5.2E-06 30.4 2.0 25 20-44 93-120 (126)
373 KOG0669 Cyclin T-dependent kin 90.4 0.016 3.6E-07 40.9 -3.3 47 105-151 22-70 (376)
374 PF04478 Mid2: Mid2 like cell 90.2 0.059 1.3E-06 34.8 -0.7 15 53-67 51-65 (154)
375 KOG0616 cAMP-dependent protein 90.1 0.41 9E-06 34.8 3.3 35 101-135 45-80 (355)
376 PF12661 hEGF: Human growth fa 90.0 0.15 3.2E-06 18.8 0.6 12 33-44 1-12 (13)
377 KOG0668 Casein kinase II, alph 89.7 0.12 2.6E-06 36.2 0.4 43 105-151 43-86 (338)
378 KOG0589 Serine/threonine prote 89.4 0.35 7.6E-06 36.8 2.7 50 103-152 7-58 (426)
379 KOG1235 Predicted unusual prot 88.7 0.77 1.7E-05 36.1 4.2 31 106-136 167-197 (538)
380 KOG0671 LAMMER dual specificit 88.6 0.22 4.8E-06 37.1 1.2 43 105-149 94-137 (415)
381 PTZ00046 rifin; Provisional 88.6 0.34 7.5E-06 35.8 2.1 13 69-81 331-343 (358)
382 TIGR01477 RIFIN variant surfac 88.4 0.37 7.9E-06 35.6 2.1 12 70-81 327-338 (353)
383 PF02009 Rifin_STEVOR: Rifin/s 88.1 0.48 1E-05 34.4 2.5 12 69-80 272-283 (299)
384 KOG1290 Serine/threonine prote 87.8 0.81 1.8E-05 35.5 3.6 45 105-151 83-128 (590)
385 PF02009 Rifin_STEVOR: Rifin/s 87.4 1.4 3E-05 32.1 4.5 23 62-84 262-284 (299)
386 KOG0610 Putative serine/threon 86.5 0.6 1.3E-05 35.3 2.3 31 106-136 83-114 (459)
387 KOG1151 Tousled-like protein k 86.3 0.15 3.2E-06 39.2 -0.9 27 106-132 469-496 (775)
388 KOG1214 Nidogen and related ba 85.1 0.77 1.7E-05 37.8 2.4 41 7-48 731-774 (1289)
389 KOG0584 Serine/threonine prote 84.9 0.34 7.3E-06 38.3 0.4 47 105-152 45-96 (632)
390 KOG0576 Mitogen-activated prot 84.7 0.17 3.7E-06 40.5 -1.2 39 98-136 13-52 (829)
391 PF12877 DUF3827: Domain of un 84.3 1.3 2.9E-05 35.3 3.4 28 54-81 269-296 (684)
392 KOG4289 Cadherin EGF LAG seven 84.2 0.75 1.6E-05 40.2 2.1 33 9-44 1238-1272(2531)
393 PF10873 DUF2668: Protein of u 83.9 2 4.2E-05 27.6 3.4 28 52-79 62-89 (155)
394 PF08374 Protocadherin: Protoc 83.0 1.2 2.6E-05 30.6 2.4 12 54-65 37-48 (221)
395 PF05454 DAG1: Dystroglycan (D 82.1 0.43 9.3E-06 34.5 0.0 25 57-81 150-174 (290)
396 KOG0696 Serine/threonine prote 81.8 0.65 1.4E-05 35.5 0.9 30 105-134 354-384 (683)
397 KOG1152 Signal transduction se 81.7 1.5 3.2E-05 35.0 2.7 33 102-134 563-596 (772)
398 KOG0690 Serine/threonine prote 81.1 0.64 1.4E-05 34.4 0.6 34 101-134 169-203 (516)
399 PF06667 PspB: Phage shock pro 81.0 3 6.5E-05 23.7 3.2 22 61-82 9-30 (75)
400 KOG4289 Cadherin EGF LAG seven 80.9 1.6 3.5E-05 38.4 2.9 36 6-44 1496-1534(2531)
401 PF09064 Tme5_EGF_like: Thromb 80.7 1.6 3.6E-05 20.6 1.7 24 21-45 8-31 (34)
402 KOG4645 MAPKKK (MAP kinase kin 79.9 0.77 1.7E-05 39.7 0.7 35 100-134 1235-1270(1509)
403 TIGR02976 phageshock_pspB phag 79.8 3.3 7.1E-05 23.6 3.1 21 61-81 9-29 (75)
404 PRK12274 serine/threonine prot 79.7 5.8 0.00013 27.5 4.8 47 104-151 6-55 (218)
405 PRK09458 pspB phage shock prot 78.9 2.2 4.8E-05 24.2 2.2 25 58-82 6-30 (75)
406 PF00954 S_locus_glycop: S-loc 78.8 2.6 5.6E-05 25.6 2.7 31 11-42 78-108 (110)
407 PRK05886 yajC preprotein trans 77.8 3.6 7.9E-05 25.2 3.1 11 109-119 48-58 (109)
408 PF06247 Plasmod_Pvs28: Plasmo 77.2 0.57 1.2E-05 31.4 -0.6 23 22-44 141-163 (197)
409 PF05393 Hum_adeno_E3A: Human 76.5 5.3 0.00011 23.3 3.3 15 67-81 45-59 (94)
410 PF03302 VSP: Giardia variant- 76.4 3.1 6.7E-05 31.6 3.0 11 67-77 383-393 (397)
411 PHA03265 envelope glycoprotein 75.2 3.4 7.4E-05 30.6 2.8 30 52-81 348-377 (402)
412 PF06365 CD34_antigen: CD34/Po 75.0 5 0.00011 27.5 3.4 28 54-81 101-128 (202)
413 PF15050 SCIMP: SCIMP protein 74.8 4.4 9.6E-05 25.2 2.8 6 56-61 10-15 (133)
414 KOG4260 Uncharacterized conser 74.0 4.2 9.1E-05 29.2 3.0 37 12-48 143-184 (350)
415 PF13095 FTA2: Kinetochore Sim 74.0 4.1 8.9E-05 28.0 2.9 32 100-132 37-69 (207)
416 KOG1236 Predicted unusual prot 73.1 4.1 8.9E-05 31.5 2.9 50 94-144 184-249 (565)
417 PF14610 DUF4448: Protein of u 72.8 1.8 4E-05 29.2 1.0 23 55-77 159-181 (189)
418 KOG4717 Serine/threonine prote 72.5 3 6.6E-05 33.0 2.1 48 103-151 21-71 (864)
419 PF12946 EGF_MSP1_1: MSP1 EGF 72.3 1.5 3.3E-05 21.2 0.4 25 20-44 8-33 (37)
420 KOG0033 Ca2+/calmodulin-depend 71.6 0.11 2.5E-06 36.7 -5.1 48 102-150 13-63 (355)
421 PRK06531 yajC preprotein trans 71.4 4.4 9.4E-05 25.1 2.3 13 106-118 42-55 (113)
422 COG1862 YajC Preprotein transl 71.2 5.9 0.00013 23.8 2.8 12 109-120 53-64 (97)
423 KOG0195 Integrin-linked kinase 70.9 1.1 2.4E-05 32.4 -0.4 41 107-149 197-239 (448)
424 PRK01723 3-deoxy-D-manno-octul 70.5 12 0.00026 26.2 4.7 28 105-133 36-64 (239)
425 PF13908 Shisa: Wnt and FGF in 70.4 2.7 5.9E-05 28.0 1.4 14 54-67 78-91 (179)
426 PF14531 Kinase-like: Kinase-l 68.8 10 0.00023 27.5 4.1 47 102-148 14-63 (288)
427 PF02699 YajC: Preprotein tran 68.3 10 0.00022 21.9 3.3 11 109-119 46-56 (82)
428 PF06697 DUF1191: Protein of u 68.0 8.5 0.00018 27.8 3.4 18 53-70 212-229 (278)
429 COG0478 RIO-like serine/threon 66.3 8.5 0.00018 28.0 3.2 28 105-132 96-123 (304)
430 PF12301 CD99L2: CD99 antigen 66.3 9.2 0.0002 25.4 3.2 29 54-82 114-142 (169)
431 PF05808 Podoplanin: Podoplani 64.7 2.1 4.6E-05 28.0 0.0 22 54-75 132-153 (162)
432 KOG1033 eIF-2alpha kinase PEK/ 64.3 2.1 4.5E-05 33.4 -0.1 50 99-148 48-98 (516)
433 PF08374 Protocadherin: Protoc 63.8 9.7 0.00021 26.3 3.0 22 52-73 39-60 (221)
434 PRK05585 yajC preprotein trans 62.5 14 0.0003 22.5 3.3 11 109-119 62-72 (106)
435 TIGR00739 yajC preprotein tran 60.0 11 0.00025 21.8 2.5 10 109-118 47-56 (84)
436 PF04689 S1FA: DNA binding pro 59.2 24 0.00053 19.3 3.4 9 63-71 22-30 (69)
437 PF15069 FAM163: FAM163 family 59.0 21 0.00045 23.0 3.7 10 123-132 110-119 (143)
438 PF08116 Toxin_29: PhTx neurot 58.8 2.1 4.6E-05 19.3 -0.6 8 21-28 17-24 (31)
439 KOG1217 Fibrillins and related 58.5 11 0.00024 28.6 2.9 36 7-44 268-305 (487)
440 PF04478 Mid2: Mid2 like cell 57.5 1.7 3.7E-05 28.2 -1.3 21 55-75 49-70 (154)
441 PF05568 ASFV_J13L: African sw 56.4 25 0.00054 22.7 3.7 28 54-81 32-59 (189)
442 PF14584 DUF4446: Protein of u 55.4 19 0.00041 23.5 3.2 25 109-133 106-131 (151)
443 PF13268 DUF4059: Protein of u 51.5 42 0.00092 18.8 3.6 19 66-84 20-38 (72)
444 PF15102 TMEM154: TMEM154 prot 51.5 8 0.00017 25.0 0.9 10 57-66 58-68 (146)
445 KOG0588 Serine/threonine prote 50.7 14 0.0003 30.3 2.3 49 103-151 15-66 (786)
446 KOG0695 Serine/threonine prote 49.7 5.8 0.00013 29.7 0.1 35 100-134 250-285 (593)
447 KOG3607 Meltrins, fertilins an 48.8 36 0.00078 28.2 4.4 14 31-44 641-654 (716)
448 KOG3516 Neurexin IV [Signal tr 48.2 16 0.00035 31.7 2.4 35 7-44 542-579 (1306)
449 PF09919 DUF2149: Uncharacteri 47.4 30 0.00064 20.6 2.8 19 109-129 71-90 (92)
450 PF11857 DUF3377: Domain of un 47.0 19 0.00041 20.4 1.8 14 63-76 39-52 (74)
451 PF15183 MRAP: Melanocortin-2 46.3 33 0.00071 19.9 2.8 20 54-73 38-57 (90)
452 PF10389 CoatB: Bacteriophage 45.0 44 0.00095 17.1 3.5 13 68-80 32-44 (46)
453 KOG1226 Integrin beta subunit 44.8 49 0.0011 27.5 4.5 22 54-75 714-735 (783)
454 KOG3637 Vitronectin receptor, 44.4 24 0.00053 30.5 2.9 25 52-76 977-1001(1030)
455 PF01683 EB: EB module; Inter 43.1 30 0.00066 17.6 2.3 12 33-44 38-49 (52)
456 PTZ00234 variable surface prot 42.8 48 0.001 25.7 4.0 16 88-103 404-419 (433)
457 KOG3054 Uncharacterized conser 42.6 30 0.00066 24.5 2.7 15 60-74 7-21 (299)
458 PF01299 Lamp: Lysosome-associ 42.2 5.7 0.00012 29.0 -0.8 11 72-82 289-299 (306)
459 COG1718 RIO1 Serine/threonine 41.6 39 0.00084 24.3 3.2 29 108-136 56-84 (268)
460 PTZ00046 rifin; Provisional 40.4 45 0.00098 25.1 3.5 24 63-86 322-345 (358)
461 TIGR01477 RIFIN variant surfac 40.1 47 0.001 25.0 3.5 23 64-86 318-340 (353)
462 PF02430 AMA-1: Apical membran 39.9 9.6 0.00021 29.4 0.0 28 54-81 430-457 (471)
463 PF11403 Yeast_MT: Yeast metal 39.1 38 0.00083 15.8 1.9 13 32-44 22-34 (40)
464 PF14380 WAK_assoc: Wall-assoc 38.0 25 0.00054 20.7 1.6 19 22-40 74-94 (94)
465 PTZ00087 thrombosponding-relat 37.3 98 0.0021 22.5 4.6 8 19-26 240-247 (340)
466 smart00811 Alpha_kinase Alpha- 37.2 1E+02 0.0023 21.0 4.7 31 106-136 17-51 (198)
467 KOG1240 Protein kinase contain 36.5 20 0.00043 31.4 1.3 31 101-132 24-54 (1431)
468 PRK14051 negative regulator Gr 36.2 50 0.0011 20.2 2.6 27 105-131 28-54 (123)
469 PTZ00208 65 kDa invariant surf 35.6 13 0.00029 28.2 0.2 28 55-82 387-414 (436)
470 TIGR00847 ccoS cytochrome oxid 35.4 50 0.0011 17.2 2.3 26 55-80 3-28 (51)
471 KOG0599 Phosphorylase kinase g 34.5 36 0.00077 25.0 2.1 52 100-151 17-76 (411)
472 COG3763 Uncharacterized protei 34.5 82 0.0018 17.7 3.1 39 56-94 3-41 (71)
473 PF09716 ETRAMP: Malarial earl 34.4 65 0.0014 18.7 2.9 29 56-84 56-84 (84)
474 PF12259 DUF3609: Protein of u 34.3 47 0.001 25.1 2.8 33 52-84 297-329 (361)
475 PF08277 PAN_3: PAN-like domai 34.1 49 0.0011 17.9 2.3 21 111-131 51-71 (71)
476 cd05058 PTKc_Met_Ron Catalytic 34.0 64 0.0014 22.1 3.4 31 122-152 21-51 (262)
477 PF15176 LRR19-TM: Leucine-ric 33.8 68 0.0015 19.4 2.9 29 54-82 17-45 (102)
478 PF09083 DUF1923: Domain of un 33.2 8.6 0.00019 20.2 -0.8 17 114-130 39-55 (64)
479 TIGR03521 GldG gliding-associa 33.1 52 0.0011 26.3 3.1 25 57-81 526-550 (552)
480 cd05060 PTKc_Syk_like Catalyti 32.9 83 0.0018 21.5 3.8 37 116-152 15-51 (257)
481 PF15099 PIRT: Phosphoinositid 32.4 33 0.00072 21.6 1.5 35 52-86 81-115 (129)
482 PRK01741 cell division protein 32.2 66 0.0014 24.0 3.2 30 57-86 5-34 (332)
483 PF07359 LEAP-2: Liver-express 31.9 32 0.00069 19.5 1.2 23 1-26 44-71 (77)
484 PF07423 DUF1510: Protein of u 31.8 26 0.00057 24.4 1.1 22 55-76 15-36 (217)
485 PF07406 NICE-3: NICE-3 protei 31.6 85 0.0018 21.3 3.5 34 52-85 7-40 (186)
486 PF10883 DUF2681: Protein of u 31.4 1.1E+02 0.0024 18.0 3.5 25 60-84 7-31 (87)
487 PF04971 Lysis_S: Lysis protei 31.0 82 0.0018 17.6 2.7 31 55-85 33-63 (68)
488 PF03302 VSP: Giardia variant- 30.7 36 0.00079 26.0 1.8 25 54-78 366-390 (397)
489 PF11353 DUF3153: Protein of u 30.6 66 0.0014 22.1 2.9 24 58-81 185-208 (209)
490 smart00019 SF_P Pulmonary surf 30.4 1E+02 0.0022 20.1 3.5 66 37-105 20-97 (191)
491 COG1288 Predicted membrane pro 30.4 74 0.0016 24.9 3.3 46 61-106 220-265 (481)
492 PRK00665 petG cytochrome b6-f 30.2 73 0.0016 15.3 3.0 27 56-82 5-31 (37)
493 COG3197 FixS Uncharacterized p 30.1 88 0.0019 16.8 2.6 22 53-74 3-24 (58)
494 CHL00008 petG cytochrome b6/f 30.1 73 0.0016 15.3 3.0 27 56-82 5-31 (37)
495 PF03908 Sec20: Sec20; InterP 30.0 69 0.0015 18.7 2.6 21 58-78 71-91 (92)
496 cd05040 PTKc_Ack_like Catalyti 29.9 71 0.0015 21.8 3.1 26 126-152 25-51 (257)
497 PF11694 DUF3290: Protein of u 29.7 93 0.002 20.3 3.3 29 58-86 18-46 (149)
498 PF13974 YebO: YebO-like prote 29.5 1.2E+02 0.0026 17.5 4.0 37 61-97 1-37 (80)
499 PF14654 Epiglycanin_C: Mucin, 29.5 75 0.0016 19.1 2.6 25 56-80 20-44 (106)
500 PF10661 EssA: WXG100 protein 29.4 59 0.0013 21.1 2.4 30 49-78 113-142 (145)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=3.4e-13 Score=99.03 Aligned_cols=65 Identities=45% Similarity=0.745 Sum_probs=57.8
Q ss_pred hHhhhHHHHHHhhhCCCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 87 LKKWCAAKLVKATKNYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 87 ~~~~~~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
.+.|+++++..+|++|+..++||+|+||.||+|.++++..||||++......+ ..+|.+|+++|+
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls 126 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILS 126 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHh
Confidence 56699999999999999999999999999999999999999999997766542 277999999875
No 2
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.05 E-value=1e-09 Score=86.22 Aligned_cols=48 Identities=31% Similarity=0.511 Sum_probs=38.2
Q ss_pred cCeecccCCceeeeEEc-CCC----CEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 105 SHFLGEGGFGSVYKGVL-PDN----TQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~----~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
..+||+|+||+||||.| |.| .+||+|.+.+........+|+.|+-.|+
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~ma 753 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMA 753 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHh
Confidence 45799999999999998 554 3799999977666544489999987664
No 3
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.00 E-value=2.9e-10 Score=88.59 Aligned_cols=65 Identities=22% Similarity=0.379 Sum_probs=49.2
Q ss_pred hHhhhHHHHHHhhhCCC---------ccCeecccCCceeeeEEcC--C--CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 87 LKKWCAAKLVKATKNYD---------ESHFLGEGGFGSVYKGVLP--D--NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 87 ~~~~~~~~l~~~~~~~~---------~~~~ig~g~~g~Vy~g~~~--~--~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...++|++-..+...|. .+++||.|.||+|++|.+. . ...||||.|+......++.+|+.|+.+|
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIM 684 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIM 684 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhc
Confidence 34566766544444332 2468999999999999982 2 4589999999887776669999999987
No 4
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.91 E-value=3.8e-09 Score=78.34 Aligned_cols=43 Identities=44% Similarity=0.630 Sum_probs=34.0
Q ss_pred ccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...++|+|.||.||||.+ +++.||||++..... +.|.+|-.+.
T Consensus 214 l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~k----qs~~~Ek~Iy 256 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEK----QSFQNEKNIY 256 (534)
T ss_pred hHHHhhcCccceeehhhc-cCceeEEEecCHHHH----HHHHhHHHHH
Confidence 346789999999999999 569999999966444 6677776553
No 5
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=98.82 E-value=2.1e-08 Score=76.49 Aligned_cols=48 Identities=27% Similarity=0.377 Sum_probs=42.1
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
.+.||+|.||+|.......+..||||+|+..+....+.+|.+|+++|+
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLs 590 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILS 590 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHh
Confidence 456999999999999997779999999998877666699999999885
No 6
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.70 E-value=3.7e-09 Score=82.82 Aligned_cols=52 Identities=27% Similarity=0.405 Sum_probs=42.5
Q ss_pred CCCccCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
++...+.||+|+||+||+|+..+ .+.||||.|++.+..+.+.||.+|+++|.
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla 544 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLA 544 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHH
Confidence 44445679999999999998733 45799999999888866699999999873
No 7
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.58 E-value=4e-08 Score=72.61 Aligned_cols=41 Identities=29% Similarity=0.573 Sum_probs=33.3
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhh
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGI 150 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~ 150 (152)
.+.||+|.||+||+|.| .|..||||++...+. ..+-+|.++
T Consensus 216 ~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE----~SWfrEtEI 256 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDE----RSWFRETEI 256 (513)
T ss_pred EEEecCccccceeeccc-cCCceEEEEecccch----hhhhhHHHH
Confidence 45799999999999999 689999999966554 556666655
No 8
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.54 E-value=4.9e-08 Score=74.50 Aligned_cols=59 Identities=24% Similarity=0.374 Sum_probs=44.6
Q ss_pred hhHHHHHHhhhCCCccCeecccCCceeeeEEcCCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 90 WCAAKLVKATKNYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 90 ~~~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
.+.++|+..-+.+.....||+|.||+||+|.|- ..||||+|+.... .+. +.|.+||..+
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~ql-qaFKnEVa~l 442 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQL-QAFKNEVAVL 442 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHH-HHHHHHHHHH
Confidence 444566655555666788999999999999994 3699999965544 334 8999999865
No 9
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=98.37 E-value=2.1e-07 Score=47.12 Aligned_cols=34 Identities=47% Similarity=0.977 Sum_probs=28.8
Q ss_pred ccccccCCCCCCC--CccceeCCCCceeeCCCCCcCC
Q 042973 9 DIDECLDKEKYHC--EGKCKNTIGSCTCDCPIGMYGD 43 (152)
Q Consensus 9 ~~~~C~~~~~~~c--~~~C~~~~g~~~C~C~~g~~~~ 43 (152)
|++||.... ..| ++.|.|..|+|.|.|++||...
T Consensus 1 DidEC~~~~-~~C~~~~~C~N~~Gsy~C~C~~Gy~~~ 36 (42)
T PF07645_consen 1 DIDECAEGP-HNCPENGTCVNTEGSYSCSCPPGYELN 36 (42)
T ss_dssp ESSTTTTTS-SSSSTTSEEEEETTEEEEEESTTEEEC
T ss_pred CccccCCCC-CcCCCCCEEEcCCCCEEeeCCCCcEEC
Confidence 689998754 567 6899999999999999999843
No 10
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.31 E-value=5.2e-06 Score=68.49 Aligned_cols=37 Identities=24% Similarity=0.434 Sum_probs=30.8
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD 136 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~ 136 (152)
..+...++||+|+||.||+|.. .++..||||+++...
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~ 727 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN 727 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc
Confidence 3466678999999999999987 578899999996544
No 11
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.21 E-value=1.5e-06 Score=70.78 Aligned_cols=51 Identities=33% Similarity=0.473 Sum_probs=41.6
Q ss_pred CCccCeecccCCceeeeEEcCC--C----CEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD--N----TQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~--~----~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
....+.||+|.||.||+|.+.+ + ..||||+|+...+.++..+|++|..+|+
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~ 750 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMS 750 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHh
Confidence 3345679999999999999843 2 3499999988877777799999999885
No 12
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.21 E-value=8.3e-07 Score=67.13 Aligned_cols=65 Identities=34% Similarity=0.441 Sum_probs=48.9
Q ss_pred hHhhhHHHHHHhhhCCCccCeecccCCceeeeEEcCC--C---CEEEEEecCCc---chhHHHHHHHHHHhhhC
Q 042973 87 LKKWCAAKLVKATKNYDESHFLGEGGFGSVYKGVLPD--N---TQIAVKKPKES---DKIRINQEFQKEMGIVL 152 (152)
Q Consensus 87 ~~~~~~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~~--~---~~vavK~l~~~---~~~~~~~~f~~E~~~ls 152 (152)
...+....|+...++......||+|+||+||+|.+.. + ..||||..+.. ...+. .+|++|+++|.
T Consensus 144 ~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~-~e~m~EArvMr 216 (474)
T KOG0194|consen 144 KRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQI-KEFMKEARVMR 216 (474)
T ss_pred cccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHH-HHHHHHHHHHH
Confidence 4456666777777777778899999999999999833 2 23899999752 23334 89999999873
No 13
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=98.07 E-value=3.9e-06 Score=61.97 Aligned_cols=47 Identities=34% Similarity=0.566 Sum_probs=36.7
Q ss_pred cCeecccCCceeeeEEcCCCCE-EEEEecCCcchhHH-HHHHHHHHhhhC
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQ-IAVKKPKESDKIRI-NQEFQKEMGIVL 152 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~-vavK~l~~~~~~~~-~~~f~~E~~~ls 152 (152)
.+.+|+|+||+||+|.| .|.. ||||.+........ .++|.+|+.+|+
T Consensus 46 ~~~iG~G~~g~V~~~~~-~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~ 94 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKW-RGTDVVAVKIISDPDFDDESRKAFRREASLLS 94 (362)
T ss_pred hhhcccCCceeEEEEEe-CCceeEEEEEecchhcChHHHHHHHHHHHHHH
Confidence 45589999999999999 4566 99999976543322 379999998874
No 14
>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]
Probab=98.05 E-value=7e-06 Score=70.87 Aligned_cols=35 Identities=40% Similarity=0.864 Sum_probs=27.8
Q ss_pred Cc--ccccccCCCCCCC--CccceeCCCCceeeCCCCCcCCC
Q 042973 7 VT--DIDECLDKEKYHC--EGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 7 C~--~~~~C~~~~~~~c--~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
|+ ++++|. ..+| +|+|.|..|+|+|.|..|+.+..
T Consensus 3937 Ce~~Gi~eCs---~n~C~~gg~C~n~~gsf~CncT~g~~gr~ 3975 (4289)
T KOG1219|consen 3937 CEARGISECS---KNVCGTGGQCINIPGSFHCNCTPGILGRT 3975 (4289)
T ss_pred eecccccccc---cccccCCceeeccCCceEeccChhHhccc
Confidence 66 366775 3467 88999999999999999988755
No 15
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.03 E-value=7.2e-06 Score=63.09 Aligned_cols=50 Identities=20% Similarity=0.401 Sum_probs=36.4
Q ss_pred hhhCCCccCeecccCCceeeeEEc-----------------CCCCEEEEEecCCcchhHHHHHHHHHH
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVL-----------------PDNTQIAVKKPKESDKIRINQEFQKEM 148 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~-----------------~~~~~vavK~l~~~~~~~~~~~f~~E~ 148 (152)
..++|...+.||+|+||.||+|.+ .++..||||+++....... ++|.+|.
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~-~~fl~e~ 209 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVR-QDFLKTG 209 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhH-HHHHhhh
Confidence 456788889999999999999964 2356799999965443333 5566543
No 16
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=98.02 E-value=8.2e-06 Score=57.36 Aligned_cols=57 Identities=25% Similarity=0.359 Sum_probs=45.0
Q ss_pred HHHHhhhCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 94 KLVKATKNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 94 ~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|++.+++++.....||+|+||.||+|... ++..||+|.+........ +.|.+|+.++
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~-~~~~~e~~~l 59 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYV-QPLHEEIALH 59 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHH-HHHHHHHHHH
Confidence 45667788888889999999999999864 567899999876655444 6788888765
No 17
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.00 E-value=6.2e-06 Score=64.73 Aligned_cols=46 Identities=33% Similarity=0.577 Sum_probs=37.6
Q ss_pred CeecccCCceeeeEEc--CCCC--EEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 106 HFLGEGGFGSVYKGVL--PDNT--QIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~--~~~~--~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++||+|.||.|++|.| ++|. .||||.|+.......-.+|++|+.+|
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M 165 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHM 165 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHH
Confidence 4689999999999999 3344 68999998876664338999999887
No 18
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=97.96 E-value=1.4e-06 Score=65.36 Aligned_cols=46 Identities=35% Similarity=0.488 Sum_probs=38.6
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
.+.||+|.||+||.|.|.....||+|.++..+... ++|.+|+.+|.
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~--~~f~~Ea~iMk 256 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSP--EAFLREAQIMK 256 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEeccccCh--hHHHHHHHHHH
Confidence 46799999999999999766699999998764433 78999999873
No 19
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.96 E-value=1.1e-05 Score=59.36 Aligned_cols=51 Identities=29% Similarity=0.479 Sum_probs=38.1
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCc--chhHHHHHHHHHHhhhC
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES--DKIRINQEFQKEMGIVL 152 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~--~~~~~~~~f~~E~~~ls 152 (152)
+|.....||+|+|+.||+|+. .++..||||.+... +.... +....|+.+|+
T Consensus 11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~-e~L~~Ei~iLk 64 (429)
T KOG0595|consen 11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLV-ELLLSEIKILK 64 (429)
T ss_pred cceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHH-HHHHHHHHHHH
Confidence 455556699999999999987 44789999999554 33333 66778887763
No 20
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.90 E-value=8.7e-06 Score=59.30 Aligned_cols=53 Identities=25% Similarity=0.369 Sum_probs=38.5
Q ss_pred hhCCCccCeecccCCceeeeEEc------CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVL------PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~------~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.++|...+.||+|+||.||++.. ..+..||+|.++..........|.+|+.+|
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l 64 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKIL 64 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHH
Confidence 34555567899999999999974 234679999997644433336788888765
No 21
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.90 E-value=1.4e-05 Score=59.36 Aligned_cols=53 Identities=23% Similarity=0.350 Sum_probs=38.7
Q ss_pred hhCCCccCeecccCCceeeeEEc------CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVL------PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~------~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.++|...+.||+|+||.||++.+ ..+..||||.++........+.|.+|+.+|
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il 92 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 92 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHH
Confidence 34566678899999999999974 235589999997544333336788898765
No 22
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.90 E-value=7.3e-06 Score=63.75 Aligned_cols=58 Identities=34% Similarity=0.490 Sum_probs=46.8
Q ss_pred HHHHHHhhhCCCccCeecccCCceeeeEEcCC-CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 92 AAKLVKATKNYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 92 ~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+++|+-...++.-.+.||-|.||.||.|.|.. ...||||.|++....- ++|+.|+.+|
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMev--eEFLkEAAvM 317 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVM 317 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhH--HHHHHHHHHH
Confidence 35666666667778899999999999999944 5689999998765543 8999999887
No 23
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.83 E-value=3.2e-05 Score=54.44 Aligned_cols=51 Identities=20% Similarity=0.345 Sum_probs=38.3
Q ss_pred CCCccCeecccCCceeeeEEcC----CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP----DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~----~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++...+.||+|+||.||+|.+. .+..||+|.++..........|.+|+.+|
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l 60 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTL 60 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 3455678999999999999862 35689999997654433336788998765
No 24
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.83 E-value=3.2e-05 Score=55.87 Aligned_cols=51 Identities=29% Similarity=0.601 Sum_probs=37.6
Q ss_pred CCCccCeecccCCceeeeEEcC-CCC----EEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNT----QIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~----~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|+||.||+|.+. ++. .||+|.++........++|.+|+.+|
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l 63 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 63 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHH
Confidence 4666788999999999999873 333 38999997554433337788888765
No 25
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.81 E-value=2.7e-05 Score=57.01 Aligned_cols=53 Identities=25% Similarity=0.323 Sum_probs=38.3
Q ss_pred hhCCCccCeecccCCceeeeEEc------CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVL------PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~------~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.++|...+.||+|+||.||++.. ..+..||||.++..........+.+|+.+|
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l 64 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 64 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHH
Confidence 34455578899999999999973 346789999997544333226678887765
No 26
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.81 E-value=4.4e-05 Score=53.58 Aligned_cols=52 Identities=25% Similarity=0.395 Sum_probs=39.2
Q ss_pred hCCCccCeecccCCceeeeEEcCC----CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPD----NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~----~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|...+.||+|+||.||+|.+.. ...||+|.++.........+|.+|+.++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l 59 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIM 59 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHH
Confidence 346667899999999999998843 3579999997654443337899898765
No 27
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.80 E-value=2.6e-05 Score=54.57 Aligned_cols=49 Identities=27% Similarity=0.451 Sum_probs=38.6
Q ss_pred CCCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|+||.||++...++..+|+|.+....... .+|.+|+.+|
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~--~~~~~E~~~l 55 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP--EAFLAEANLM 55 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcH--HHHHHHHHHH
Confidence 344467899999999999999888999999997544332 6788888765
No 28
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.79 E-value=3e-05 Score=58.15 Aligned_cols=56 Identities=25% Similarity=0.323 Sum_probs=40.7
Q ss_pred HHhhhCCCccCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 96 VKATKNYDESHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 96 ~~~~~~~~~~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
....+.+...+.||+|+||.||+|+... +..||||+++........+.|.+|+.+|
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l 94 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIM 94 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHH
Confidence 3344556667889999999999998521 2469999997654444337899999876
No 29
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.78 E-value=5.1e-05 Score=54.43 Aligned_cols=51 Identities=27% Similarity=0.316 Sum_probs=37.3
Q ss_pred CCCccCeecccCCceeeeEEcCC-----------------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD-----------------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~-----------------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+...+.||+|+||.||++.+++ +..||+|.++.........+|.+|+.+|
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 73 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKIL 73 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 34446789999999999997632 2369999997654433337899998776
No 30
>PRK09188 serine/threonine protein kinase; Provisional
Probab=97.78 E-value=4.6e-05 Score=56.39 Aligned_cols=53 Identities=19% Similarity=0.231 Sum_probs=38.8
Q ss_pred hhCCCccCeecccCCceeeeEEcC--CCCEEEEEecCCcc----hhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVLP--DNTQIAVKKPKESD----KIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~~--~~~~vavK~l~~~~----~~~~~~~f~~E~~~l 151 (152)
...|...+.||+|+||+||++... +++.+|||++.... .......|.+|+++|
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL 75 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRAL 75 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHH
Confidence 355777889999999999999873 46778999875321 122226789999876
No 31
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.77 E-value=2.7e-05 Score=58.43 Aligned_cols=57 Identities=25% Similarity=0.320 Sum_probs=40.8
Q ss_pred HHHhhhCCCccCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 95 LVKATKNYDESHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 95 l~~~~~~~~~~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+..+.+++...+.||+|+||.||++.+.+ +..||+|+++........+.|.+|+.+|
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l 94 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIM 94 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHH
Confidence 33344455557789999999999998632 3579999997654433336788898776
No 32
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.69 E-value=5.1e-05 Score=53.04 Aligned_cols=51 Identities=29% Similarity=0.444 Sum_probs=39.5
Q ss_pred hhCCCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.++|...+.||+|+||.||++...++..+|+|.++...... .+|.+|+.++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~--~~~~~e~~~l 55 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP--EAFLQEAQIM 55 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCH--HHHHHHHHHH
Confidence 34566678899999999999998777889999997543322 6788887765
No 33
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.69 E-value=5.2e-05 Score=56.29 Aligned_cols=56 Identities=25% Similarity=0.319 Sum_probs=40.2
Q ss_pred HHhhhCCCccCeecccCCceeeeEEc------CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 96 VKATKNYDESHFLGEGGFGSVYKGVL------PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 96 ~~~~~~~~~~~~ig~g~~g~Vy~g~~------~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
....++|...+.||+|+||.||++.. .++..||+|.++..........+.+|+.+|
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il 95 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKIL 95 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHH
Confidence 33444566678899999999999874 234579999997654443336788888766
No 34
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.69 E-value=4.6e-05 Score=53.33 Aligned_cols=50 Identities=30% Similarity=0.441 Sum_probs=39.0
Q ss_pred hCCCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+.|...+.||+|++|.||++...++..||+|.++..... . ++|.+|+.+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~-~-~~~~~e~~~l 55 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-P-KDFLAEAQIM 55 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCccc-H-HHHHHHHHHH
Confidence 445556889999999999999877788999999754432 2 6788888765
No 35
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=97.68 E-value=6.8e-05 Score=53.04 Aligned_cols=52 Identities=25% Similarity=0.369 Sum_probs=39.8
Q ss_pred hCCCccCeecccCCceeeeEEcCC-----CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPD-----NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~-----~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|...++||+|+||.||+|...+ +..|++|+++..........+.+|+.+|
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l 62 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLL 62 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 455667899999999999999855 6789999997654444337788887665
No 36
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.67 E-value=3.5e-05 Score=53.83 Aligned_cols=52 Identities=31% Similarity=0.576 Sum_probs=40.4
Q ss_pred hhCCCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..+|...+.||+|+||.||++...++..+|+|.++....... .++.+|+.+|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~-~~~~~e~~~l 56 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQ-QDFQKEVQAL 56 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhH-HHHHHHHHHH
Confidence 344555678999999999999998889999999976655333 6788887654
No 37
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=97.66 E-value=6e-05 Score=52.95 Aligned_cols=47 Identities=36% Similarity=0.545 Sum_probs=36.9
Q ss_pred cCeecccCCceeeeEEcC-----CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLP-----DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~-----~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.||.|.||.||+|.+. .+..|+||.++........++|.+|+..|
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l 55 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQIL 55 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHH
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccc
Confidence 467999999999999995 25689999997654443338899998765
No 38
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=97.65 E-value=3.6e-05 Score=59.95 Aligned_cols=50 Identities=36% Similarity=0.553 Sum_probs=39.2
Q ss_pred CCccCeecccCCceeeeEEcCC---C--CEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD---N--TQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~---~--~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+...++||+|.||.||+|++.+ | ..||||+-+.....+..+.|+.|+.+|
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iM 445 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIM 445 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHH
Confidence 3445679999999999999833 2 358999998766655558999999877
No 39
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.64 E-value=7.6e-05 Score=54.82 Aligned_cols=47 Identities=23% Similarity=0.371 Sum_probs=36.3
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.||+|+||.||++.. .++..||+|.+...........|.+|+++|
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 126 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEIL 126 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHH
Confidence 45799999999999986 458899999996544333337788888776
No 40
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=97.58 E-value=8.1e-05 Score=45.97 Aligned_cols=37 Identities=24% Similarity=0.492 Sum_probs=27.4
Q ss_pred cccccccCCCCCCC-CccceeCC--CCceeeCCCCCcCCC
Q 042973 8 TDIDECLDKEKYHC-EGKCKNTI--GSCTCDCPIGMYGDG 44 (152)
Q Consensus 8 ~~~~~C~~~~~~~c-~~~C~~~~--g~~~C~C~~g~~~~~ 44 (152)
.++..|+.....-| ||.|.... ..+.|.|..||.|..
T Consensus 40 ~~i~~Cp~ey~~YClHG~C~yI~dl~~~~CrC~~GYtGeR 79 (139)
T PHA03099 40 PAIRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYTGIR 79 (139)
T ss_pred cccccCChhhCCEeECCEEEeeccCCCceeECCCCccccc
Confidence 35666765444457 88998764 678899999999876
No 41
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.58 E-value=7.9e-05 Score=55.44 Aligned_cols=51 Identities=24% Similarity=0.455 Sum_probs=36.3
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|.||.||||.- ..+..||+|.+.......+-++..+|+.+|
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~L 65 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVL 65 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHH
Confidence 345557899999999999986 236789999996544433325666666655
No 42
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.57 E-value=0.0001 Score=52.50 Aligned_cols=54 Identities=33% Similarity=0.511 Sum_probs=38.2
Q ss_pred hhhCCCccCeecccCCceeeeEEcC------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVLP------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~~------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.++.|...+.||+|+||.||+|... .+..||+|.++.........+|.+|+.+|
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l 63 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 63 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHH
Confidence 3445666788999999999999753 24579999986554333336688887654
No 43
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.56 E-value=9.5e-05 Score=52.20 Aligned_cols=50 Identities=30% Similarity=0.455 Sum_probs=38.0
Q ss_pred CCccCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++...+ +..||+|.++........++|.+|+.+|
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l 62 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELL 62 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHH
Confidence 4445789999999999998633 4689999997655543337899998765
No 44
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.56 E-value=8.9e-05 Score=51.86 Aligned_cols=48 Identities=33% Similarity=0.464 Sum_probs=37.4
Q ss_pred CCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+...+.||+|+||.||++..+++..+|+|.++..... . ++|.+|+.+|
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~-~-~~~~~E~~~l 55 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-P-ESFLEEAQIM 55 (260)
T ss_pred hhhhheeccccCceEEEEEecCCceeEEEEecCCCCC-H-HHHHHHHHHH
Confidence 3335679999999999999888889999999754332 2 6788888765
No 45
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.55 E-value=0.00017 Score=51.13 Aligned_cols=49 Identities=31% Similarity=0.442 Sum_probs=38.0
Q ss_pred CCccCeecccCCceeeeEEcC-----CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-----DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-----~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+.....||+|+||.||++.+. ++..||+|.++....... +.|.+|+.+|
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~-~~~~~e~~~l 59 (284)
T cd05081 6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL-RDFEREIEIL 59 (284)
T ss_pred ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH-HHHHHHHHHH
Confidence 444567999999999999752 467899999976655544 7888898765
No 46
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.54 E-value=0.00011 Score=51.96 Aligned_cols=54 Identities=33% Similarity=0.572 Sum_probs=39.2
Q ss_pred hhhCCCccCeecccCCceeeeEEcC------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVLP------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~~------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+++|...+.||+|+||.||+|... .+..||+|+++.........+|.+|+.++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l 63 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 63 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHH
Confidence 4456777789999999999998752 24579999986544333336788888765
No 47
>PTZ00284 protein kinase; Provisional
Probab=97.54 E-value=8.5e-05 Score=56.72 Aligned_cols=41 Identities=27% Similarity=0.340 Sum_probs=31.8
Q ss_pred HHHhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCc
Q 042973 95 LVKATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES 135 (152)
Q Consensus 95 l~~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~ 135 (152)
+...+..|...+.||+|+||.||++.. ..+..||||+++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~ 165 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV 165 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc
Confidence 333455676677899999999999986 34778999999653
No 48
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.53 E-value=9.4e-05 Score=54.11 Aligned_cols=53 Identities=25% Similarity=0.307 Sum_probs=36.9
Q ss_pred hhCCCccCeecccCCceeeeEEcC------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVLP------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~~------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.|...+.||+|+||.||++... .+..||+|+++........+.+.+|+.++
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~ 64 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKIL 64 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHH
Confidence 344555788999999999999752 24689999997544333225677777654
No 49
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.52 E-value=0.00012 Score=51.02 Aligned_cols=48 Identities=25% Similarity=0.340 Sum_probs=36.9
Q ss_pred CCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.+.++..+|+|.++..... . .+|.+|+.+|
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~-~-~~~~~e~~~l 53 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS-E-EDFIEEAKVM 53 (256)
T ss_pred cEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc-H-HHHHHHHHHH
Confidence 4445679999999999999987789999998644322 2 6788888765
No 50
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.52 E-value=0.00018 Score=51.03 Aligned_cols=50 Identities=32% Similarity=0.456 Sum_probs=36.8
Q ss_pred CCccCeecccCCceeeeEEc-----CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-----PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-----~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||+|.+ ..+..+|+|.++.........+|.+|+.+|
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l 61 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLM 61 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHH
Confidence 44457899999999999985 345789999997544433336788888765
No 51
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.52 E-value=0.00011 Score=51.37 Aligned_cols=50 Identities=26% Similarity=0.456 Sum_probs=38.4
Q ss_pred hCCCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+.+...+.||+|+||.||++...++..+|+|.++.... .. +.|.+|+.+|
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~-~~-~~~~~e~~~l 55 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SV-EAFLAEANVM 55 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCChh-HH-HHHHHHHHHH
Confidence 34555778999999999999987778899998865432 22 6788888765
No 52
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.52 E-value=5.9e-05 Score=52.17 Aligned_cols=52 Identities=25% Similarity=0.430 Sum_probs=38.5
Q ss_pred hCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
++|...+.||+|.||.||.|..+ ++-.||+|.+.... ..+..+++.+|+++-
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIq 76 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQ 76 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEee
Confidence 45666889999999999999874 46689999994322 222337888888764
No 53
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.51 E-value=9.1e-05 Score=51.99 Aligned_cols=48 Identities=27% Similarity=0.420 Sum_probs=36.9
Q ss_pred CCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|.....||+|+||.||++...+...||+|.++..... . .+|.+|+.++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~-~-~~~~~E~~~l 55 (262)
T cd05071 8 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-P-EAFLQEAQVM 55 (262)
T ss_pred eeEeeecCCCCCCcEEEEEecCCceEEEEecccCccC-H-HHHHHHHHHH
Confidence 4456789999999999999877778999999753332 2 6788888765
No 54
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=97.51 E-value=0.00016 Score=51.88 Aligned_cols=46 Identities=28% Similarity=0.377 Sum_probs=34.6
Q ss_pred CeecccCCceeeeEEcCC-CCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 106 HFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
-.+|+|+||.|||.+-.+ |+.||||++.+... ...++--++|+++|
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmL 55 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRML 55 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHH
Confidence 468999999999998744 89999999965443 33346667777665
No 55
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.50 E-value=0.00012 Score=51.16 Aligned_cols=49 Identities=31% Similarity=0.490 Sum_probs=37.9
Q ss_pred CCCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||+|...++..||+|.+...... . +.|.+|+.++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~-~-~~~~~e~~~l 55 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-V-QAFLEEANLM 55 (261)
T ss_pred HeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchh-H-HHHHHHHHHH
Confidence 34456789999999999999888889999998654332 2 6788887665
No 56
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.49 E-value=0.0002 Score=50.69 Aligned_cols=51 Identities=33% Similarity=0.640 Sum_probs=36.6
Q ss_pred CCCccCeecccCCceeeeEEc-CCCC----EEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNT----QIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~----~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|+||.||+|.+ +++. .||+|.++.........++.+|+.++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l 63 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 63 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 455567899999999999986 3444 48999997554443336788887654
No 57
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=97.49 E-value=0.0001 Score=56.52 Aligned_cols=46 Identities=28% Similarity=0.491 Sum_probs=36.5
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
+++||+|.||+||-|.- ..|+.||||.+.... ..++ ....+|+.+|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqe-sqlR~EVaIL 617 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQE-SQLRNEVAIL 617 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchH-HHHHHHHHHH
Confidence 57899999999999976 458999999995543 2233 7889999876
No 58
>PHA02988 hypothetical protein; Provisional
Probab=97.48 E-value=0.00019 Score=51.10 Aligned_cols=47 Identities=21% Similarity=0.339 Sum_probs=36.3
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEecCCcchhH--HHHHHHHHHhhhC
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIR--INQEFQKEMGIVL 152 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~--~~~~f~~E~~~ls 152 (152)
...+++|+++.||+|.+ +|..||||.++...... ..+.|.+|+.+|+
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~ 73 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLR 73 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHH
Confidence 36789999999999999 78999999997543322 1267889987763
No 59
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=97.48 E-value=0.00011 Score=51.56 Aligned_cols=47 Identities=32% Similarity=0.464 Sum_probs=33.5
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
.+.+|+|.||.||+|.- ..|+.||||+++..... ..+..-++|+..|
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~L 55 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLL 55 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHH
Confidence 46789999999999974 45889999999654332 1124556666554
No 60
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.47 E-value=0.00017 Score=51.28 Aligned_cols=50 Identities=24% Similarity=0.321 Sum_probs=36.1
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..||+|.++..... .....+.+|+.+|
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il 54 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRIL 54 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHH
Confidence 34457899999999999986 46889999998543221 1125678888765
No 61
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.44 E-value=0.00019 Score=51.46 Aligned_cols=52 Identities=23% Similarity=0.404 Sum_probs=37.5
Q ss_pred hCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|...+.||+|+||.||++... ++..||+|.++..........+.+|+.+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l 57 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLL 57 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHH
Confidence 34555678999999999999874 57899999986543322224567777665
No 62
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.43 E-value=0.00029 Score=49.47 Aligned_cols=52 Identities=27% Similarity=0.523 Sum_probs=38.3
Q ss_pred hCCCccCeecccCCceeeeEEcCC-C---CEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPD-N---TQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~-~---~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|...+.||+|+||.||++.... + ..+|+|.++........++|.+|++++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 60 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIM 60 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHH
Confidence 356667899999999999998742 2 379999997553333337788888765
No 63
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.43 E-value=6.5e-05 Score=62.10 Aligned_cols=53 Identities=28% Similarity=0.463 Sum_probs=39.1
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
.+|.+-.+||+|+||.|||.+- -||+..|||++.............+|+.+|+
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LA 532 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLA 532 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHh
Confidence 4555566899999999999962 2799999999976653333356777887764
No 64
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=97.43 E-value=6.5e-05 Score=52.92 Aligned_cols=46 Identities=24% Similarity=0.363 Sum_probs=36.7
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGI 150 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~ 150 (152)
...||.|+||+|+|-.. +.|..+|||+++......+.+.|+.|.++
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~ 115 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDT 115 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHH
Confidence 34689999999999876 67899999999877664444778888754
No 65
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.43 E-value=0.00024 Score=50.47 Aligned_cols=52 Identities=31% Similarity=0.534 Sum_probs=38.7
Q ss_pred hCCCccCeecccCCceeeeEEcC------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|.....||+|+||.||++..+ .+..+|+|.++.........+|.+|+.++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l 62 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALM 62 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHH
Confidence 45666778999999999999853 35689999997654433337788888765
No 66
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=97.43 E-value=0.00025 Score=34.72 Aligned_cols=31 Identities=52% Similarity=1.118 Sum_probs=24.8
Q ss_pred ccccccCCCCCCC--CccceeCCCCceeeCCCCCc
Q 042973 9 DIDECLDKEKYHC--EGKCKNTIGSCTCDCPIGMY 41 (152)
Q Consensus 9 ~~~~C~~~~~~~c--~~~C~~~~g~~~C~C~~g~~ 41 (152)
++++|... .+| +++|.+..++|.|.|+.|+.
T Consensus 1 d~~~C~~~--~~C~~~~~C~~~~g~~~C~C~~g~~ 33 (39)
T smart00179 1 DIDECASG--NPCQNGGTCVNTVGSYRCECPPGYT 33 (39)
T ss_pred CcccCcCC--CCcCCCCEeECCCCCeEeECCCCCc
Confidence 35778642 467 55999999999999999998
No 67
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.42 E-value=0.00019 Score=51.18 Aligned_cols=51 Identities=22% Similarity=0.350 Sum_probs=36.6
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|+||.||++... ++..||+|.++..........+.+|+.+|
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 57 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLL 57 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHH
Confidence 3455678999999999999863 57899999986543322225677787665
No 68
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.41 E-value=0.00021 Score=50.52 Aligned_cols=53 Identities=32% Similarity=0.422 Sum_probs=39.4
Q ss_pred hhCCCccCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+++|...+.||+|+||.||++.+.+ +..||+|.+..........+|.+|+.++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l 63 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIM 63 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 3456667889999999999998843 4678999987554433336789887665
No 69
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.41 E-value=0.00023 Score=49.51 Aligned_cols=48 Identities=23% Similarity=0.439 Sum_probs=36.9
Q ss_pred CCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+...+.||+|+||.||++.+.++..+|+|.++...... .+|.+|+.++
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~--~~~~~e~~~l 53 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE--EDFIEEAQVM 53 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCH--HHHHHHHHHH
Confidence 34457899999999999998778899999986543322 6788887765
No 70
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.41 E-value=0.00031 Score=48.94 Aligned_cols=48 Identities=27% Similarity=0.426 Sum_probs=38.0
Q ss_pred CCCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.. .+..||+|.++.... .. +.|.+|+.++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~-~~~~~e~~~l 54 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AA-QAFLAEASVM 54 (256)
T ss_pred hccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HH-HHHHHHHHHH
Confidence 455567899999999999998 578999999976554 23 6788888665
No 71
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.40 E-value=0.00038 Score=51.51 Aligned_cols=49 Identities=20% Similarity=0.331 Sum_probs=36.7
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..||+|++.... .... ..+.+|+++|
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~E~~~l 53 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSC-KRVFRELKML 53 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHH-HHHHHHHHHH
Confidence 45567899999999999985 468899999986432 2222 5678888765
No 72
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.39 E-value=0.00031 Score=49.09 Aligned_cols=51 Identities=27% Similarity=0.447 Sum_probs=38.0
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCc--chhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKES--DKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~--~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... ++..+|+|.++.. ........+.+|++++
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l 56 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLL 56 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHH
Confidence 4566788999999999999985 6889999988532 2222226788888765
No 73
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.38 E-value=0.00015 Score=50.92 Aligned_cols=52 Identities=21% Similarity=0.408 Sum_probs=36.9
Q ss_pred hhhCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++..|...+.||+|+||.||+|... .+..+|+|.+...... . .++.+|+.+|
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~-~-~~~~~e~~~l 56 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-E-EEIKQEINML 56 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc-H-HHHHHHHHHH
Confidence 4445555678999999999999874 4778999998644322 2 5666776554
No 74
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.35 E-value=0.00024 Score=49.75 Aligned_cols=48 Identities=29% Similarity=0.458 Sum_probs=36.8
Q ss_pred CCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+.....||+|+||.||++...++..+|+|.++..... . +.|.+|+.++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~-~-~~~~~E~~~l 55 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM-P-EAFLQEAQIM 55 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCcc-H-HHHHHHHHHH
Confidence 4445689999999999999877778999998654332 2 6788888765
No 75
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.35 E-value=0.00022 Score=51.29 Aligned_cols=50 Identities=22% Similarity=0.348 Sum_probs=35.9
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... .+..||+|.++..........+.+|+.++
T Consensus 8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 58 (309)
T cd07872 8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLL 58 (309)
T ss_pred eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHH
Confidence 445678999999999999864 46789999986543322225677777665
No 76
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.34 E-value=0.00046 Score=48.17 Aligned_cols=51 Identities=24% Similarity=0.432 Sum_probs=37.5
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||.|+||.||++.. .++..+|+|.++........+++.+|+..|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 53 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAM 53 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHH
Confidence 345567899999999999986 457789999986443222227788888765
No 77
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.34 E-value=0.00047 Score=48.84 Aligned_cols=50 Identities=24% Similarity=0.337 Sum_probs=36.7
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..+|+|.+..........+|.+|+.+|
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l 53 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEIL 53 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHH
Confidence 33456899999999999975 457899999985443322226788888765
No 78
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.34 E-value=0.00028 Score=52.48 Aligned_cols=50 Identities=22% Similarity=0.280 Sum_probs=36.2
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|.....||+|+||.||++.. ..+..+|+|.++.... ......|.+|+.+|
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il 55 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDIL 55 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH
Confidence 44567899999999999976 4578999999964321 11125688888765
No 79
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.33 E-value=0.00039 Score=48.76 Aligned_cols=50 Identities=28% Similarity=0.325 Sum_probs=36.7
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++.....||+|+||.||+|.. .++..||+|.++....... ..+.+|+.++
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~-~~~~~e~~~l 60 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF-SLIQQEIFMV 60 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchH-HHHHHHHHHH
Confidence 345567899999999999986 5678999999865443333 5567777654
No 80
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.32 E-value=0.00027 Score=52.01 Aligned_cols=51 Identities=22% Similarity=0.316 Sum_probs=36.6
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.. ..+..||||.++.... ......+.+|+.+|
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il 55 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDIL 55 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH
Confidence 455567899999999999987 3578999999964321 11115577787765
No 81
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.32 E-value=0.00048 Score=48.68 Aligned_cols=49 Identities=20% Similarity=0.274 Sum_probs=34.1
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMG 149 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~ 149 (152)
+|...+.||+|+||.||++... +|..||+|.++.........++..|+.
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~ 51 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLD 51 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHH
Confidence 3555678999999999999874 588999999865432222245555554
No 82
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=97.31 E-value=0.00023 Score=55.80 Aligned_cols=37 Identities=35% Similarity=0.583 Sum_probs=30.8
Q ss_pred hhhCCCccCeecccCCceeeeEEcCC-----CCEEEEEecCC
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVLPD-----NTQIAVKKPKE 134 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~~~-----~~~vavK~l~~ 134 (152)
..++|...+.||+|+||.||+|...+ +..||+|+++.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 45677778899999999999999844 57899999864
No 83
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.31 E-value=0.00026 Score=50.27 Aligned_cols=47 Identities=26% Similarity=0.426 Sum_probs=35.2
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...||+|+||.||++.. ..+..+|+|.++..........|.+|+.++
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l 56 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVV 56 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHH
Confidence 45789999999999986 347899999986543333336788887654
No 84
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=97.30 E-value=0.00053 Score=50.26 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=44.9
Q ss_pred hhHHHHHHhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 90 WCAAKLVKATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 90 ~~~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
....++...+++|...+.||+|+||.||++.. .++..||+|+++..... ...+.+.+|+.++
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l 70 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 70 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHH
Confidence 34456666778888888999999999999975 56889999998653221 1125677777654
No 85
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.30 E-value=0.00046 Score=50.26 Aligned_cols=52 Identities=21% Similarity=0.210 Sum_probs=39.2
Q ss_pred hCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|.....||+|+||.||++... .+..+|+|.++..........|.+|+.+|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l 57 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL 57 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHH
Confidence 45555678999999999999874 47789999987543333336788898776
No 86
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.30 E-value=0.00025 Score=50.24 Aligned_cols=47 Identities=34% Similarity=0.499 Sum_probs=34.7
Q ss_pred cCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.||+|+||.||+|...+ +..||+|+++........+.|.+|+.++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~ 62 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMR 62 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 4568999999999998632 4689999997554433336788887664
No 87
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.30 E-value=0.0004 Score=50.61 Aligned_cols=52 Identities=25% Similarity=0.488 Sum_probs=37.9
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|...+.||+|+||.||++.. .++..||+|.++..........+.+|+.++
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 57 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKIL 57 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHH
Confidence 4566678899999999999975 458899999986433322225677777654
No 88
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.29 E-value=0.00059 Score=47.79 Aligned_cols=51 Identities=25% Similarity=0.476 Sum_probs=37.2
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.. .++..||+|.++... .......|.+|++++
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l 56 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLL 56 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHH
Confidence 455567899999999999986 467899999875322 222226788888765
No 89
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.29 E-value=0.00057 Score=48.32 Aligned_cols=49 Identities=22% Similarity=0.421 Sum_probs=35.8
Q ss_pred CccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||+|.. .++..+|+|.+...........|.+|+.++
T Consensus 7 ~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l 56 (277)
T cd06641 7 TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 56 (277)
T ss_pred hhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHH
Confidence 3356799999999999986 457899999986443333336788887665
No 90
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.29 E-value=0.00069 Score=49.44 Aligned_cols=47 Identities=26% Similarity=0.305 Sum_probs=38.5
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.||+|..|+|||... +.+..+|.|++........+++..+|++++
T Consensus 84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il 131 (364)
T KOG0581|consen 84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEIL 131 (364)
T ss_pred hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHH
Confidence 46799999999999987 557889999996665555558899999876
No 91
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.28 E-value=0.00036 Score=48.80 Aligned_cols=46 Identities=30% Similarity=0.354 Sum_probs=35.8
Q ss_pred ccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
....||+|+||.||.+.+.++..+|+|.++..... . .+|.+|+.++
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~-~-~~~~~e~~~l 53 (256)
T cd05113 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-E-DEFIEEAKVM 53 (256)
T ss_pred EeeEecCcccceEEEEEecCCCcEEEEEcCCCccc-H-HHHHHHHHHH
Confidence 35679999999999999877778999998754332 2 6788888765
No 92
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.28 E-value=0.0005 Score=50.16 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=38.8
Q ss_pred hCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|...+.||+|+||.||++... .+..+|+|.++..........|.+|+.+|
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l 57 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL 57 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHH
Confidence 45556678999999999999874 47789999886543333336788888765
No 93
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.27 E-value=0.00048 Score=48.71 Aligned_cols=50 Identities=40% Similarity=0.632 Sum_probs=36.6
Q ss_pred CCccCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||+|.... ...||+|.++.........+|.+|+.+|
T Consensus 7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l 62 (283)
T cd05048 7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELM 62 (283)
T ss_pred cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHH
Confidence 4445789999999999998633 2479999997654443336788888765
No 94
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.26 E-value=0.00024 Score=50.38 Aligned_cols=59 Identities=20% Similarity=0.365 Sum_probs=42.5
Q ss_pred hHHHHHHhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 91 CAAKLVKATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 91 ~~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.++.+..+.++|.....||+|+||.||++.. ..+..+|+|.++...... .++.+|+.++
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~--~~~~~e~~~l 68 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID--EEIEAEYNIL 68 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchH--HHHHHHHHHH
Confidence 3455666777887788999999999999977 457889999886533222 5566666543
No 95
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.26 E-value=0.00046 Score=49.12 Aligned_cols=48 Identities=23% Similarity=0.310 Sum_probs=34.5
Q ss_pred ccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
..+.||+|+||+||++.. .++..+|+|.++..... .....+.+|+.+|
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il 54 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQIL 54 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHH
Confidence 346799999999999987 45789999998543221 1114577787765
No 96
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=97.26 E-value=0.00019 Score=53.20 Aligned_cols=52 Identities=23% Similarity=0.335 Sum_probs=36.4
Q ss_pred hCCCccCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..+....++-+|.||.||+|.|++ .+.|-||+++...++-+..-|+.|..+|
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~ll 341 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLL 341 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 344445567899999999997744 3457888887766655446777776543
No 97
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.26 E-value=0.00034 Score=53.97 Aligned_cols=56 Identities=25% Similarity=0.213 Sum_probs=40.0
Q ss_pred HHhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 96 VKATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 96 ~~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
......|...+.||+|+||.||++.. .++..||||.++.... ......+.+|+..|
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l 85 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCL 85 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHH
Confidence 34445677778999999999999975 5688999999854322 22225677777654
No 98
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.25 E-value=0.00039 Score=48.53 Aligned_cols=48 Identities=25% Similarity=0.356 Sum_probs=36.2
Q ss_pred CCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|.||.||++.+.++..+|+|.++...... .+|.+|+.++
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~--~~~~~e~~~l 53 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE--DDFIEEAKVM 53 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCH--HHHHHHHHHH
Confidence 33457799999999999998777789999986543322 5788887665
No 99
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.25 E-value=0.00049 Score=52.34 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=28.9
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEecCCcch
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDK 137 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~ 137 (152)
.+.|+.|++|.||+|++.+|+.||||..+....
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~ 154 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIE 154 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcH
Confidence 357999999999999999999999999976543
No 100
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=97.25 E-value=0.00064 Score=47.69 Aligned_cols=48 Identities=35% Similarity=0.463 Sum_probs=34.2
Q ss_pred ccCeecccCCceeeeEEcCC----CCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVLPD----NTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~~~----~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
..+.||+|+||.||+|.+.. +..||+|.++.... ......|.+|++.|
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l 55 (273)
T cd05035 3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACM 55 (273)
T ss_pred cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHH
Confidence 35789999999999998732 35799999864322 12226788887765
No 101
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.23 E-value=0.00032 Score=49.90 Aligned_cols=53 Identities=23% Similarity=0.365 Sum_probs=37.7
Q ss_pred hhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+.+|...+.||+|+||.||++.. .++..+|+|.++..........+.+|+.+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l 57 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLL 57 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHH
Confidence 34566667899999999999976 458899999986543322224566776554
No 102
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=97.23 E-value=0.00033 Score=51.01 Aligned_cols=36 Identities=31% Similarity=0.719 Sum_probs=28.7
Q ss_pred CCccCeecccCCceeeeEEcCC-CCEEEEEecCCcch
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDK 137 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~ 137 (152)
+...+++|.|+||.||+|.+.. +..||||+......
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r 62 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR 62 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC
Confidence 4456789999999999999843 68999999855443
No 103
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.22 E-value=0.00066 Score=48.87 Aligned_cols=51 Identities=24% Similarity=0.281 Sum_probs=37.5
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.. ..+..+|+|.++.........++.+|+++|
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l 53 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVL 53 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHH
Confidence 355567899999999999986 347788999886543333336788888765
No 104
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.22 E-value=0.00019 Score=54.48 Aligned_cols=50 Identities=26% Similarity=0.454 Sum_probs=35.9
Q ss_pred CCccCeecccCCceeeeEE-cCCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGV-LPDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~-~~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
|...+.||+|.||.|||+. +..|..||+|+++-... ........+|+.+|
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~IL 170 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKIL 170 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHH
Confidence 3334578999999999997 46688999999965442 22225567888776
No 105
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.22 E-value=0.00034 Score=49.65 Aligned_cols=47 Identities=30% Similarity=0.309 Sum_probs=35.7
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.||+|+||+||++.. +++..+|+|.+...........|.+|++++
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l 57 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIM 57 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHH
Confidence 46789999999999987 457889999886544333337888888765
No 106
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.21 E-value=0.0005 Score=48.91 Aligned_cols=57 Identities=25% Similarity=0.302 Sum_probs=39.6
Q ss_pred HHHhhhCCCccCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 95 LVKATKNYDESHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 95 l~~~~~~~~~~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+....+.|...+.||+|+||.||++...+ ...+|+|.++.........++.+|+.+|
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l 69 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMM 69 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 33344556667889999999999998632 3579999987543333226788888655
No 107
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.21 E-value=0.00068 Score=47.60 Aligned_cols=50 Identities=26% Similarity=0.436 Sum_probs=36.0
Q ss_pred CCccCeecccCCceeeeEEcC----CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP----DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~----~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||+|... .+..+|+|.++..........|.+|+.+|
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 59 (267)
T cd05066 6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIM 59 (267)
T ss_pred eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 444678999999999999862 23379999997544333336888888765
No 108
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.20 E-value=0.0009 Score=46.85 Aligned_cols=49 Identities=27% Similarity=0.510 Sum_probs=35.6
Q ss_pred CccCeecccCCceeeeEEcCCCCEEEEEecCCcch-----hHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDK-----IRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~-----~~~~~~f~~E~~~l 151 (152)
...+.||.|.||.||+|..+++..+|+|.++.... ......|.+|+++|
T Consensus 3 ~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l 56 (265)
T cd06631 3 TKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLL 56 (265)
T ss_pred cccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHH
Confidence 34578999999999999988889999998854321 11114577787665
No 109
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.20 E-value=0.0004 Score=49.37 Aligned_cols=51 Identities=24% Similarity=0.377 Sum_probs=36.7
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|.....||+|++|.||++... ++..||+|.++..........+.+|+.+|
T Consensus 6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l 57 (291)
T cd07844 6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLL 57 (291)
T ss_pred ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHH
Confidence 4555678999999999999874 57899999986543322224566777665
No 110
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.20 E-value=0.001 Score=46.16 Aligned_cols=47 Identities=43% Similarity=0.655 Sum_probs=35.9
Q ss_pred cCeecccCCceeeeEEcCC-----CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLPD-----NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~-----~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.||.|+||.||++...+ +..||+|.++........+.|.+|+..|
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l 55 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIM 55 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHH
Confidence 4678999999999999854 3789999997655432227888887765
No 111
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.19 E-value=0.00069 Score=48.04 Aligned_cols=47 Identities=26% Similarity=0.333 Sum_probs=35.2
Q ss_pred cCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.||+|+||.||++... .+..+|+|.++..........|.+|+.++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l 53 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDIL 53 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHH
Confidence 467899999999999884 58899999886542222226788887665
No 112
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.19 E-value=0.0006 Score=48.69 Aligned_cols=51 Identities=18% Similarity=0.225 Sum_probs=36.4
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... ++..||+|.++.... ....+.+.+|+.+|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l 55 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVL 55 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHH
Confidence 3445678999999999999874 578999999854321 11225677887765
No 113
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.19 E-value=0.00048 Score=54.49 Aligned_cols=58 Identities=29% Similarity=0.448 Sum_probs=43.6
Q ss_pred HHHHhhhCCCccCeecccCCceeeeEEcC----C----CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 94 KLVKATKNYDESHFLGEGGFGSVYKGVLP----D----NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 94 ~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~----~----~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|+...+++...+.+|+|.||.|++|.+. . ...||||+++......+.++|..|+.+|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m 355 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVL 355 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHH
Confidence 34555555555568999999999999862 1 3579999998766655558999999876
No 114
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=97.19 E-value=0.00077 Score=47.36 Aligned_cols=46 Identities=35% Similarity=0.491 Sum_probs=34.1
Q ss_pred cCeecccCCceeeeEEcC----CCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLP----DNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~----~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
.+.||+|+||.||++.+. .+..||+|.++... .... +++.+|+.+|
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~-~~~~~E~~~l 55 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDI-EEFLREAACM 55 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHH-HHHHHHHHHH
Confidence 567999999999999863 25789999986432 2222 6788888765
No 115
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=97.19 E-value=0.00015 Score=56.83 Aligned_cols=48 Identities=29% Similarity=0.536 Sum_probs=36.9
Q ss_pred ccCeecccCCceeeeEE-cCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGV-LPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~-~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..+.||+|+||.||+|+ -..|+.||||..+........+...+|+++|
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~Eieil 65 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEIL 65 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHH
Confidence 35679999999999998 4569999999997755433336677777765
No 116
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.19 E-value=0.00048 Score=48.99 Aligned_cols=59 Identities=25% Similarity=0.359 Sum_probs=43.8
Q ss_pred hhHHHHHHhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhh
Q 042973 90 WCAAKLVKATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGI 150 (152)
Q Consensus 90 ~~~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~ 150 (152)
+.++++..++++|...+.||+|.||.||++.. .++..+|+|.+....... .++.+|+.+
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~--~~~~~e~~~ 71 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD--EEIEAEYNI 71 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHH--HHHHHHHHH
Confidence 55667777888888888999999999999987 457899999986543222 445555544
No 117
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.19 E-value=0.00052 Score=48.33 Aligned_cols=51 Identities=31% Similarity=0.547 Sum_probs=37.5
Q ss_pred CCCccCeecccCCceeeeEEcCC------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.... +..||+|.+..........+|.+|+.+|
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l 63 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVM 63 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHH
Confidence 45556789999999999998732 3579999997554433336788888765
No 118
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.18 E-value=0.00082 Score=47.41 Aligned_cols=48 Identities=31% Similarity=0.412 Sum_probs=36.2
Q ss_pred ccCeecccCCceeeeEEcC-----CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVLP-----DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~~-----~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..+.||+|+||.||++.+. .+..+|||.++.........+|.+|+.++
T Consensus 8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l 60 (284)
T cd05038 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEIL 60 (284)
T ss_pred hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHH
Confidence 3467999999999999873 25789999997655432227889988765
No 119
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.18 E-value=0.00063 Score=47.79 Aligned_cols=49 Identities=27% Similarity=0.423 Sum_probs=35.8
Q ss_pred CccCeecccCCceeeeEEcCC-C---CEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLPD-N---TQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~~-~---~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||+|.... + ..||+|.++.........+|..|+.++
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l 59 (269)
T cd05065 7 KIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 59 (269)
T ss_pred EEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 336789999999999998743 2 369999997543333337899998765
No 120
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.18 E-value=0.00096 Score=47.47 Aligned_cols=49 Identities=31% Similarity=0.356 Sum_probs=35.0
Q ss_pred CccCeecccCCceeeeEEcC------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||+|... ....+|+|.++.........+|.+|+.+|
T Consensus 3 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l 57 (290)
T cd05045 3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLL 57 (290)
T ss_pred cccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 34578999999999999852 23568999887554433236788888765
No 121
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=97.17 E-value=0.00016 Score=45.06 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=29.1
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEecCCcch
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDK 137 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~ 137 (152)
.+-|+.++.|.||+|++.+|+.||||..+..-.
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~ 48 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQRPGIE 48 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcchHHH
Confidence 357899999999999999999999999877554
No 122
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.17 E-value=0.0005 Score=49.38 Aligned_cols=54 Identities=24% Similarity=0.336 Sum_probs=39.0
Q ss_pred hhhCCCccCeecccCCceeeeEEc------CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVL------PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~------~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..++|...+.||+|+||.||++.. ..+..||+|.++........+.|.+|+.++
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l 92 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIM 92 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHH
Confidence 334566678999999999999974 124579999987654433336788888765
No 123
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.17 E-value=0.00069 Score=47.63 Aligned_cols=50 Identities=32% Similarity=0.513 Sum_probs=36.8
Q ss_pred CCccCeecccCCceeeeEEcCCC----CEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDN----TQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~----~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+...+.||+|+||.||+|...+. ..||+|...........+.|.+|+.++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l 61 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIM 61 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHH
Confidence 45567899999999999987432 468999986655333337888888765
No 124
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=97.17 E-value=0.00054 Score=49.88 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=36.4
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... .+..||+|.++..... .....+.+|+.+|
T Consensus 3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l 55 (333)
T cd05600 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDIL 55 (333)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHH
Confidence 445678999999999999975 4789999999643221 1225677887665
No 125
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.17 E-value=0.00091 Score=46.44 Aligned_cols=49 Identities=31% Similarity=0.568 Sum_probs=35.6
Q ss_pred CccCeecccCCceeeeEEcC-CCCEEEEEecCCcch----hHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK----IRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~----~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||+|... ++..|++|.+..... ....+.|.+|+.+|
T Consensus 3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l 56 (258)
T cd06632 3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALL 56 (258)
T ss_pred cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHH
Confidence 34578999999999999985 688999998854321 11125688887665
No 126
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.17 E-value=0.00048 Score=48.27 Aligned_cols=49 Identities=37% Similarity=0.584 Sum_probs=37.1
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... .+..||+|.++..... . .+|.+|+.+|
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~-~~~~~e~~~l 56 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-V-EEFLKEAAVM 56 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchH-H-HHHHHHHHHH
Confidence 3555678999999999999974 3778999998754332 2 6788888765
No 127
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=97.16 E-value=0.001 Score=46.74 Aligned_cols=47 Identities=34% Similarity=0.441 Sum_probs=33.5
Q ss_pred cCeecccCCceeeeEEcCCCC---EEEEEecCCcc-hhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLPDNT---QIAVKKPKESD-KIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~---~vavK~l~~~~-~~~~~~~f~~E~~~l 151 (152)
.+.||+|+||.||+|.+.+.. .+|+|.++... .....++|.+|+.+|
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l 54 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCM 54 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHH
Confidence 568999999999999985432 58999886532 222226788887665
No 128
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.16 E-value=0.00045 Score=48.85 Aligned_cols=50 Identities=26% Similarity=0.387 Sum_probs=38.3
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||.|+||.||++... ++..+|+|.++....... ++|.+|+.++
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~e~~~l 56 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEEL-EDFMVEIDIL 56 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHH-HHHHHHHHHH
Confidence 3444567899999999999874 578999999876555444 7788888765
No 129
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=97.15 E-value=0.00077 Score=49.33 Aligned_cols=52 Identities=19% Similarity=0.355 Sum_probs=37.1
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
..|...+.||+|+||.||+|.. ..+..||+|.++.... ......+.+|+.++
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l 68 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLL 68 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHH
Confidence 4566678899999999999986 4588999999864321 11124577777655
No 130
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.15 E-value=0.00091 Score=47.31 Aligned_cols=59 Identities=20% Similarity=0.323 Sum_probs=42.5
Q ss_pred hhHHHHHHhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhh
Q 042973 90 WCAAKLVKATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGI 150 (152)
Q Consensus 90 ~~~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~ 150 (152)
.++.++..+...|.....+|.|+||.||++.. ..+..+|+|.+...... . .++..|+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~-~-~~~~~e~~~ 65 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-E-EEIKLEINM 65 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH-H-HHHHHHHHH
Confidence 45666666667777778999999999999987 45788999988543322 2 456666554
No 131
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.15 E-value=0.00072 Score=48.11 Aligned_cols=50 Identities=30% Similarity=0.466 Sum_probs=37.7
Q ss_pred CCCccCeecccCCceeeeEEc------CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL------PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~------~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.+|+|+||.||++.. .++..+|+|.++..+.... .+|.+|+++|
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~e~~~l 61 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR-KDFHREAELL 61 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHH-HHHHHHHHHH
Confidence 455577899999999999974 2245689999976655444 7888898765
No 132
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=97.15 E-value=0.00037 Score=53.96 Aligned_cols=48 Identities=29% Similarity=0.459 Sum_probs=34.8
Q ss_pred ccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHH-HHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRI-NQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~-~~~f~~E~~~l 151 (152)
.-+.||+|.||.||||+-. .++.||+|.+........ -+...+|++++
T Consensus 6 v~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~ 55 (808)
T KOG0597|consen 6 VYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRIL 55 (808)
T ss_pred HHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHH
Confidence 3457899999999999863 467899999855433321 16678888775
No 133
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.15 E-value=0.00089 Score=47.89 Aligned_cols=51 Identities=24% Similarity=0.432 Sum_probs=36.3
Q ss_pred CCCccCeecccCCceeeeEEcCC-CC--EEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD-NT--QIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~-~~--~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|....+||+|+||.||++...+ +. .+++|.++........++|.+|+.++
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l 56 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVL 56 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHH
Confidence 45556789999999999998743 32 47899887543332236788888765
No 134
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.15 E-value=0.0011 Score=48.45 Aligned_cols=53 Identities=21% Similarity=0.283 Sum_probs=37.7
Q ss_pred hhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
.+.|.....||+|+||.||++.. ..+..||||.++..... .....+.+|+.+|
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l 68 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLL 68 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHH
Confidence 34566677899999999999985 45779999998653221 1115577787665
No 135
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.15 E-value=0.00071 Score=48.15 Aligned_cols=49 Identities=24% Similarity=0.293 Sum_probs=35.0
Q ss_pred CccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||++.. .++..||+|.+...... .....+.+|+.+|
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l 54 (285)
T cd05605 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 54 (285)
T ss_pred eEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHH
Confidence 3456899999999999986 45789999998643221 1125577787765
No 136
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=97.14 E-value=0.00032 Score=50.66 Aligned_cols=46 Identities=26% Similarity=0.374 Sum_probs=32.6
Q ss_pred CeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 106 HFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
+.+|+|.||+||+|.- ..|..||+|+++.... ......-.+|+.+|
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisll 64 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLL 64 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHH
Confidence 4589999999999986 5578999999965543 22224455565544
No 137
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.14 E-value=0.00088 Score=48.13 Aligned_cols=51 Identities=27% Similarity=0.477 Sum_probs=36.1
Q ss_pred CCCccCeecccCCceeeeEEcC-CCC--EEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNT--QIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~--~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... ++. .+|+|.++.........+|.+|+++|
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l 61 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 61 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHH
Confidence 4555678999999999999873 343 46888886544333336788888764
No 138
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.14 E-value=0.00066 Score=48.50 Aligned_cols=52 Identities=31% Similarity=0.375 Sum_probs=36.7
Q ss_pred hCCCccCeecccCCceeeeEEcC-----------------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP-----------------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~-----------------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|...+.||+|+||.||++... +...+|+|.++.........+|.+|+.+|
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l 73 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIM 73 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHH
Confidence 34555678999999999987532 23468999997554333337888998765
No 139
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.13 E-value=0.0006 Score=50.63 Aligned_cols=50 Identities=22% Similarity=0.264 Sum_probs=36.2
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..+|+|.+..... ......+.+|+.+|
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il 55 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDIL 55 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHH
Confidence 45567899999999999986 4577899999864322 11125677887765
No 140
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.13 E-value=0.00062 Score=48.29 Aligned_cols=50 Identities=24% Similarity=0.441 Sum_probs=36.0
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... ++..+|+|+++..... .....+.+|+.++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l 54 (287)
T cd07848 3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKML 54 (287)
T ss_pred ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHH
Confidence 445678999999999999984 4778999998643221 1125677787665
No 141
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.13 E-value=0.00039 Score=54.20 Aligned_cols=50 Identities=28% Similarity=0.402 Sum_probs=37.5
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhH--HHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIR--INQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~--~~~~f~~E~~~l 151 (152)
|.+-+.||.|+||.||-+.- .+...||||++....+++ ..++.+.|+..|
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL 80 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFL 80 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHH
Confidence 34445689999999999874 457799999997665543 347788888765
No 142
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.12 E-value=0.00032 Score=46.83 Aligned_cols=48 Identities=21% Similarity=0.403 Sum_probs=32.3
Q ss_pred ccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
..+.||+|.||+|||+.- ..++.||.|+.+..+. ......-++|+-+|
T Consensus 6 kmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicll 55 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLL 55 (292)
T ss_pred HHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHH
Confidence 356789999999999985 4477899998854322 22224555665443
No 143
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.12 E-value=0.00051 Score=50.02 Aligned_cols=51 Identities=24% Similarity=0.354 Sum_probs=36.8
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... ++..||+|.++..... ...+.+.+|+.+|
T Consensus 19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l 72 (329)
T PTZ00263 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSIL 72 (329)
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH
Confidence 4555678999999999999874 4789999998643211 1125688887765
No 144
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.12 E-value=0.00088 Score=47.85 Aligned_cols=51 Identities=20% Similarity=0.353 Sum_probs=36.3
Q ss_pred hCCCccCeecccCCceeeeEEcCC-CCEEEEEecCCcchhHHHHHHHHHHhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRINQEFQKEMGI 150 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~~~f~~E~~~ 150 (152)
+++...+.||+|+||.||++...+ +..||||.++.........++..|+.+
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~ 66 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDV 66 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHH
Confidence 345556789999999999999855 889999999654332222556666543
No 145
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.11 E-value=0.00067 Score=47.40 Aligned_cols=50 Identities=24% Similarity=0.249 Sum_probs=37.1
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... ++..+|+|.+..........+|.+|++++
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 53 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDIL 53 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHH
Confidence 334567899999999999884 57899999986554333337788887654
No 146
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.11 E-value=0.00074 Score=47.75 Aligned_cols=50 Identities=22% Similarity=0.369 Sum_probs=36.3
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|++|.||+|+.. ++..||+|.++..........+.+|+.++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l 52 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLM 52 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHH
Confidence 445678999999999999974 57899999986543322225667777654
No 147
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.11 E-value=0.001 Score=47.30 Aligned_cols=51 Identities=27% Similarity=0.312 Sum_probs=36.6
Q ss_pred CCCccCeecccCCceeeeEEcCC-----------------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD-----------------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~-----------------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|+||.||++...+ +..||+|.+..........+|.+|+.+|
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l 73 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKIL 73 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHH
Confidence 34556789999999999987632 2458999987554333337888888765
No 148
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.10 E-value=0.00079 Score=48.06 Aligned_cols=51 Identities=27% Similarity=0.316 Sum_probs=35.9
Q ss_pred CCCccCeecccCCceeeeEEcCC---------------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD---------------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~---------------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|+||.||.+.... ...||+|.++..........|.+|+++|
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l 71 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIM 71 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 34446789999999999886532 1258999997643333336799998776
No 149
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.10 E-value=0.00076 Score=50.03 Aligned_cols=51 Identities=18% Similarity=0.245 Sum_probs=36.1
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.. .++..||+|.+..... ....+.+.+|+.+|
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il 55 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVL 55 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHH
Confidence 344567899999999999976 4578999999854321 11125677787765
No 150
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.10 E-value=0.00056 Score=48.69 Aligned_cols=51 Identities=25% Similarity=0.421 Sum_probs=36.3
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... ++..||+|.++..... .....+.+|+.++
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l 54 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLL 54 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHH
Confidence 4555678999999999999874 5789999988543221 1115677777654
No 151
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.10 E-value=0.00085 Score=47.30 Aligned_cols=49 Identities=22% Similarity=0.462 Sum_probs=35.3
Q ss_pred CccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||+|.. .++..+|+|.++.........++.+|+.++
T Consensus 4 ~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l 53 (277)
T cd06917 4 QRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALL 53 (277)
T ss_pred hhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHH
Confidence 3456799999999999996 568899999986543322225677777654
No 152
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.09 E-value=0.00077 Score=48.96 Aligned_cols=50 Identities=22% Similarity=0.205 Sum_probs=34.1
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..||+|.++..... ...+.+..|..++
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l 54 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVL 54 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH
Confidence 34467899999999999986 45789999998643211 1114566666543
No 153
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=97.09 E-value=0.00079 Score=48.86 Aligned_cols=50 Identities=20% Similarity=0.157 Sum_probs=34.1
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... .+..||+|.++.... ....+.+..|..++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l 54 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVL 54 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH
Confidence 344578999999999999874 367899999864321 11115566666554
No 154
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.08 E-value=0.00098 Score=47.11 Aligned_cols=50 Identities=32% Similarity=0.550 Sum_probs=36.3
Q ss_pred CCccCeecccCCceeeeEEcCC-CC----EEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD-NT----QIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~-~~----~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||+|.+.+ +. .+|+|.++.........+|.+|+.+|
T Consensus 9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l 63 (279)
T cd05057 9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVM 63 (279)
T ss_pred cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHH
Confidence 3445789999999999998743 32 58999986654433337788888765
No 155
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.08 E-value=0.00054 Score=48.39 Aligned_cols=47 Identities=26% Similarity=0.449 Sum_probs=34.8
Q ss_pred cCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.||+|.||.||+|... ++..||+|.++........++|.+|+.++
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l 56 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVL 56 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHH
Confidence 356899999999999863 46789999986443333336788888765
No 156
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.08 E-value=0.00081 Score=49.64 Aligned_cols=51 Identities=20% Similarity=0.320 Sum_probs=35.7
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||+||++.. ..+..+|+|.++..... .....+.+|+.+|
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il 55 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDIL 55 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHH
Confidence 455567899999999999976 45789999999653221 1114566776654
No 157
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.07 E-value=0.00094 Score=48.15 Aligned_cols=44 Identities=23% Similarity=0.393 Sum_probs=32.0
Q ss_pred cCeecccCCceeeeEEcC---CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLP---DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~---~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...||+|+||.||++... .+..+|+|.++..... .++.+|+.+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l 52 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS---MSACREIALL 52 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc---HHHHHHHHHH
Confidence 457999999999999863 3578999998653321 4566677655
No 158
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.07 E-value=0.001 Score=47.14 Aligned_cols=50 Identities=34% Similarity=0.472 Sum_probs=37.7
Q ss_pred CCCccCeecccCCceeeeEEcC------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++.....||+|+||.||++..+ ++..+|+|.++....... .+|.+|+.++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~e~~~l 61 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR-QDFQREAELL 61 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHH-HHHHHHHHHH
Confidence 3444678999999999999642 355799999876665554 7899988765
No 159
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.06 E-value=0.0012 Score=46.76 Aligned_cols=49 Identities=31% Similarity=0.330 Sum_probs=36.3
Q ss_pred CccCeecccCCceeeeEEc-----CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVL-----PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~-----~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||.+.+ .++..||+|.++..........|.+|+.+|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l 60 (284)
T cd05079 7 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 60 (284)
T ss_pred hhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHH
Confidence 3356799999999999875 346789999997654433336788888765
No 160
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=97.06 E-value=0.0013 Score=46.59 Aligned_cols=48 Identities=29% Similarity=0.369 Sum_probs=34.9
Q ss_pred ccCeecccCCceeeeEEc-----CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVL-----PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~-----~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..+.||+|+||.||.+.+ .++..||+|.++..........|.+|+.+|
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 60 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINIL 60 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHH
Confidence 356799999999987653 356789999997654322236788888765
No 161
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.04 E-value=0.00092 Score=47.29 Aligned_cols=50 Identities=26% Similarity=0.414 Sum_probs=36.1
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... .+..+|+|.+...... ...+.|.+|+++|
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l 54 (286)
T cd07846 3 YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRML 54 (286)
T ss_pred eeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHH
Confidence 444578999999999999985 4789999988543222 1226677887765
No 162
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.04 E-value=0.00094 Score=48.68 Aligned_cols=50 Identities=18% Similarity=0.268 Sum_probs=34.8
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..+|+|.++.... ....+.|.+|..++
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (331)
T cd05597 3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVL 55 (331)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH
Confidence 44467899999999999986 3478999999864221 11225577776554
No 163
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.03 E-value=0.00082 Score=48.13 Aligned_cols=50 Identities=24% Similarity=0.375 Sum_probs=35.3
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|.....||+|+||.||++... .+..||+|.++..........+.+|+.++
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 58 (301)
T cd07873 8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLL 58 (301)
T ss_pred eEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHH
Confidence 444577999999999999874 47889999986443322224566777654
No 164
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.03 E-value=0.0007 Score=49.48 Aligned_cols=51 Identities=24% Similarity=0.346 Sum_probs=36.5
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... ++..||+|.++..... .....|.+|+.+|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL 55 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHH
Confidence 3445678999999999999874 5889999999643221 1125677777665
No 165
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A ....
Probab=97.03 E-value=0.00038 Score=33.73 Aligned_cols=25 Identities=40% Similarity=0.743 Sum_probs=20.8
Q ss_pred CCCccceeCCCCceeeCCCCCcCCC
Q 042973 20 HCEGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 20 ~c~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
.|...|.+.++++.|.|+.||...+
T Consensus 7 gC~h~C~~~~g~~~C~C~~Gy~L~~ 31 (36)
T PF14670_consen 7 GCSHICVNTPGSYRCSCPPGYKLAE 31 (36)
T ss_dssp GSSSEEEEETTSEEEE-STTEEE-T
T ss_pred CcCCCCccCCCceEeECCCCCEECc
Confidence 5788999999999999999998765
No 166
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.02 E-value=0.0014 Score=45.85 Aligned_cols=51 Identities=24% Similarity=0.394 Sum_probs=36.1
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc----hhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD----KIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~----~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.. .++..||+|.++... .....+.|.+|+.+|
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l 58 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLL 58 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHH
Confidence 456678899999999999986 447899999875321 111115677787655
No 167
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.02 E-value=0.001 Score=47.44 Aligned_cols=49 Identities=24% Similarity=0.423 Sum_probs=37.4
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+...+.||.|+||.||++... ++..+++|.+...+.... ++|.+|+.++
T Consensus 14 y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~e~~~l 63 (292)
T cd06644 14 WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL-EDYMVEIEIL 63 (292)
T ss_pred hhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHH-HHHHHHHHHH
Confidence 334567999999999999874 478999999976555444 7788887654
No 168
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.02 E-value=0.00098 Score=48.44 Aligned_cols=51 Identities=25% Similarity=0.290 Sum_probs=36.3
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.. .++..+|+|.++.... ......|.+|+.++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~ 55 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIL 55 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH
Confidence 355567899999999999986 4578999999965432 11225677777654
No 169
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.01 E-value=0.00084 Score=48.14 Aligned_cols=52 Identities=25% Similarity=0.328 Sum_probs=36.6
Q ss_pred hCCCccCeecccCCceeeeEEc--------CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL--------PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~--------~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.++.....||+|+||.||++.. .++..||+|.++.........++.+|+.+|
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l 74 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 74 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHH
Confidence 4455568899999999999974 124479999987543333226788887765
No 170
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.01 E-value=0.0012 Score=47.55 Aligned_cols=44 Identities=23% Similarity=0.391 Sum_probs=32.0
Q ss_pred cCeecccCCceeeeEEcCC---CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLPD---NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~---~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...||+|+||.||++...+ +..+|+|.++..... ..+.+|+.+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~---~~~~~E~~~l 52 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS---MSACREIALL 52 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc---HHHHHHHHHH
Confidence 3579999999999998743 468999998654321 4566777655
No 171
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.01 E-value=0.001 Score=48.31 Aligned_cols=49 Identities=16% Similarity=0.359 Sum_probs=35.3
Q ss_pred CccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||++.- .++..||+|+++.... ......+.+|+.+|
T Consensus 3 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 53 (338)
T cd07859 3 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLL 53 (338)
T ss_pred EEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHH
Confidence 3356899999999999985 4578999999864321 11125688888765
No 172
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.00 E-value=0.00021 Score=50.77 Aligned_cols=48 Identities=31% Similarity=0.445 Sum_probs=36.4
Q ss_pred cCeecccCCceeeeEE-cCCCCEEEEEecCCcc-hhHHHHHHHHHHhhhC
Q 042973 105 SHFLGEGGFGSVYKGV-LPDNTQIAVKKPKESD-KIRINQEFQKEMGIVL 152 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~-~~~~~~vavK~l~~~~-~~~~~~~f~~E~~~ls 152 (152)
...||+|.||+|||.. +.+|..||.|.++-.. ....+++...|+.+|+
T Consensus 24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLk 73 (375)
T KOG0591|consen 24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLK 73 (375)
T ss_pred HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHH
Confidence 4578999999999995 5789999999996322 1222388889988774
No 173
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.00 E-value=0.0011 Score=47.38 Aligned_cols=54 Identities=24% Similarity=0.375 Sum_probs=38.1
Q ss_pred hhhCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
..++|...+.||+|.||.||+|... ++..||+|.++..... .....+.+|+.++
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~ 60 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKIL 60 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHH
Confidence 3455666788999999999999984 4789999999643321 1114566776654
No 174
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=96.99 E-value=0.0006 Score=50.58 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=38.2
Q ss_pred HhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 97 KATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 97 ~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
...++|...+.||+|+||.||++.. ..+..+|+|.++.... ......|.+|+.+|
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il 97 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIM 97 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHH
Confidence 3445666678899999999999986 3578999999854221 11114577777665
No 175
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=96.98 E-value=0.0014 Score=46.17 Aligned_cols=52 Identities=27% Similarity=0.489 Sum_probs=37.6
Q ss_pred hCCCccCeecccCCceeeeEEcC------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|.....||+|+||.||++... +...+++|.+..........+|.+|+.+|
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l 62 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMF 62 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHH
Confidence 34556678999999999999863 24579999986544432226788888765
No 176
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=96.98 E-value=0.001 Score=46.15 Aligned_cols=49 Identities=35% Similarity=0.587 Sum_probs=38.1
Q ss_pred hCCCccCeecccCCceeeeEEcCC-CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|...+.||+|.||.||++...+ +..+++|.++.... . ++|.+|++.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~-~~~~~e~~~~ 52 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--L-QEIIKEISIL 52 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--H-HHHHHHHHHH
Confidence 345566789999999999999855 78999999865433 3 7888887754
No 177
>PTZ00036 glycogen synthase kinase; Provisional
Probab=96.98 E-value=0.0008 Score=51.14 Aligned_cols=35 Identities=31% Similarity=0.676 Sum_probs=28.9
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCC
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKE 134 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~ 134 (152)
..|...+.||+|+||.||+|.. ..+..||||++..
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~ 101 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQ 101 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEec
Confidence 4566678899999999999987 4578999998854
No 178
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.98 E-value=0.0015 Score=46.86 Aligned_cols=50 Identities=18% Similarity=0.367 Sum_probs=37.5
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|+||.||++.. .++..||+|.+........ +.+.+|+.++
T Consensus 20 ~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~e~~~l 70 (297)
T cd06656 20 KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK-ELIINEILVM 70 (297)
T ss_pred hceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH-HHHHHHHHHH
Confidence 455567899999999999985 5688999999965444333 6677777654
No 179
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.97 E-value=0.0011 Score=47.88 Aligned_cols=54 Identities=24% Similarity=0.306 Sum_probs=37.7
Q ss_pred hhhCCCccCeecccCCceeeeEEc--------CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVL--------PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~--------~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
....|...+.||+|+||.||++.. .....+|+|.++.........+|.+|+.+|
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l 71 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELM 71 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHH
Confidence 334555678899999999999864 124578999987544333236788888765
No 180
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=96.97 E-value=0.00037 Score=50.63 Aligned_cols=51 Identities=20% Similarity=0.360 Sum_probs=35.1
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
+|..-+.|++|.||.||+|.- ..++.||.|+++.... ..-.-.-++|+.+|
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniL 129 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINIL 129 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHH
Confidence 344457799999999999985 4478999999965332 11113456777655
No 181
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=96.97 E-value=0.0015 Score=46.94 Aligned_cols=50 Identities=34% Similarity=0.574 Sum_probs=35.0
Q ss_pred CCccCeecccCCceeeeEEcC-CCC----EEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNT----QIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~----~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... ++. .||+|.+..........+|.+|+.++
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~ 63 (303)
T cd05110 9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 63 (303)
T ss_pred ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHH
Confidence 444568999999999999863 333 47999886544333325788887654
No 182
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=96.96 E-value=0.0017 Score=45.22 Aligned_cols=51 Identities=22% Similarity=0.332 Sum_probs=38.6
Q ss_pred CCCccCeecccCCceeeeEEcCC-CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|++|.||++.... +..+++|++..........+|.+|+..+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l 53 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTL 53 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHH
Confidence 34556789999999999998854 8899999987654422237788888654
No 183
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=96.96 E-value=0.0012 Score=46.20 Aligned_cols=50 Identities=24% Similarity=0.426 Sum_probs=36.5
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..+|||.+..... .....+|.+|+.++
T Consensus 4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l 56 (267)
T cd08229 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 56 (267)
T ss_pred hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHH
Confidence 44457899999999999986 5688999998854322 22226788888765
No 184
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.95 E-value=0.0012 Score=47.95 Aligned_cols=50 Identities=28% Similarity=0.491 Sum_probs=38.1
Q ss_pred CCccCeecccCCceeeeEEcCC-CCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
+...+.||+|.||.||.+...+ |...|||.....+.... +.+.+|+.+|+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~-~~l~~Ei~iL~ 69 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTS-ESLEREIRILS 69 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhH-HHHHHHHHHHH
Confidence 3446789999999999998744 88999999966543333 66788887764
No 185
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=96.95 E-value=0.0012 Score=48.87 Aligned_cols=50 Identities=22% Similarity=0.305 Sum_probs=35.6
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. ..+..+|+|.+...... .....+.+|+.+|
T Consensus 3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il 55 (376)
T cd05598 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDIL 55 (376)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHH
Confidence 44567899999999999986 34789999998643221 1125677787765
No 186
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=96.94 E-value=0.001 Score=49.41 Aligned_cols=57 Identities=25% Similarity=0.278 Sum_probs=39.0
Q ss_pred HHHhhhCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 95 LVKATKNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 95 l~~~~~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
+.....+|...+.||+|+||.||++... .+..+|+|.++... .......|.+|+.++
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~ 97 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 97 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHH
Confidence 3344456666788999999999999874 47789999985422 111124577777654
No 187
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=96.93 E-value=0.00098 Score=46.41 Aligned_cols=46 Identities=30% Similarity=0.500 Sum_probs=35.4
Q ss_pred CCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .+..+|+|.++.... . +.|.+|+.++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~--~-~~~~~e~~~l 53 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVT--A-QAFLEETAVM 53 (254)
T ss_pred ceeeeeeccCCCCceEeccc-CCCceEEEeecCcch--H-HHHHHHHHHH
Confidence 44467899999999999986 678899999865332 2 5788887765
No 188
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=96.92 E-value=0.0013 Score=48.06 Aligned_cols=50 Identities=28% Similarity=0.365 Sum_probs=37.4
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|+||.||++.. ..+..||+|.+........ +.+.+|+++|
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~-~~~~~Ei~~l 56 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSV-KHALREIKII 56 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchH-HHHHHHHHHH
Confidence 455567899999999999986 4578999999865544333 6677777665
No 189
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=96.92 E-value=0.0022 Score=44.14 Aligned_cols=48 Identities=29% Similarity=0.477 Sum_probs=37.4
Q ss_pred CccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...+.||+|++|.||++... ++..+++|+++....... .++.+|++.+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~e~~~l 51 (253)
T cd05122 3 EILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK-EKIINEIQIL 51 (253)
T ss_pred eeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHH-HHHHHHHHHH
Confidence 34578999999999999985 578999999976554333 7788888765
No 190
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=96.92 E-value=0.0013 Score=44.42 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=28.2
Q ss_pred CCccCeecccCCceeeeEEcCCCCEEEEEecCC
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKE 134 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~ 134 (152)
+...+.||+|+||.||++..++|+.||||.++.
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~ 49 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRL 49 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEec
Confidence 444678999999999999998899999998643
No 191
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=96.91 E-value=0.0013 Score=46.32 Aligned_cols=49 Identities=24% Similarity=0.399 Sum_probs=35.4
Q ss_pred CccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.....||.|+||.||++... ++..+|+|.+..........+|.+|+.++
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 53 (274)
T cd06609 4 TLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFL 53 (274)
T ss_pred hhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHH
Confidence 33567899999999999874 57899999986543222226778887654
No 192
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=96.91 E-value=0.0023 Score=44.91 Aligned_cols=51 Identities=22% Similarity=0.390 Sum_probs=36.3
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch----hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK----IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~----~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... .+..+|+|.++.... ......+.+|+.+|
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l 58 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLL 58 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHH
Confidence 4666789999999999999863 478999998853211 11115677787665
No 193
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=96.91 E-value=0.0014 Score=46.32 Aligned_cols=48 Identities=23% Similarity=0.430 Sum_probs=35.6
Q ss_pred ccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..+.||+|+||.||+|... .+..||+|.++..........|.+|+.++
T Consensus 8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l 56 (277)
T cd06640 8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 56 (277)
T ss_pred hhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHH
Confidence 3467899999999999874 47889999986543333237788888765
No 194
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=96.91 E-value=0.0014 Score=48.73 Aligned_cols=60 Identities=20% Similarity=0.215 Sum_probs=41.4
Q ss_pred HHHHHHhhhCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 92 AAKLVKATKNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 92 ~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
..++....++|...+.||+|+||.||++... .+..+|+|.++.... ......|.+|+.++
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~ 97 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 97 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHH
Confidence 3445555577777889999999999999874 467899999854221 11114567776654
No 195
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.91 E-value=0.0017 Score=46.16 Aligned_cols=51 Identities=27% Similarity=0.276 Sum_probs=38.3
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||.|.+|.||++... .+..+|+|.+...........|.+|+++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l 53 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEIN 53 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHH
Confidence 3555678999999999999974 47889999986543323337788898765
No 196
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=96.90 E-value=0.0015 Score=47.59 Aligned_cols=51 Identities=18% Similarity=0.283 Sum_probs=34.6
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... .+..+|+|.+..... ......|.+|..++
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVL 55 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHH
Confidence 3445678999999999999874 467899999864321 11114566666544
No 197
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.90 E-value=0.0016 Score=47.90 Aligned_cols=52 Identities=21% Similarity=0.227 Sum_probs=37.4
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc-hhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD-KIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~-~~~~~~~f~~E~~~l 151 (152)
..|...+.||+|+||.||++.- ..+..||+|.++... .......+.+|+.++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l 74 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLL 74 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHH
Confidence 4565667899999999999976 347899999986432 222226677887665
No 198
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=96.89 E-value=0.0018 Score=45.17 Aligned_cols=47 Identities=28% Similarity=0.419 Sum_probs=35.8
Q ss_pred CCCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.. .+..+|+|.++.... . +.|.+|+.++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~--~-~~~~~e~~~l 53 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--A-QAFLAEASVM 53 (256)
T ss_pred hCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCch--H-HHHHHHHHHH
Confidence 344467899999999999988 478899999865332 2 5788888665
No 199
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.88 E-value=0.0014 Score=50.73 Aligned_cols=51 Identities=27% Similarity=0.442 Sum_probs=38.6
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
.+...+.||+|+|.++|+++- ..|..||+|++.... +...++...+|+++-
T Consensus 19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIH 72 (592)
T KOG0575|consen 19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIH 72 (592)
T ss_pred eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHH
Confidence 466678999999999999987 779999999995421 222236778888763
No 200
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=96.88 E-value=0.0022 Score=45.48 Aligned_cols=50 Identities=26% Similarity=0.410 Sum_probs=33.1
Q ss_pred CCccCeecccCCceeeeEEcC-CCC----EEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNT----QIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~----~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||+|.+. ++. .+++|.+..........+|..|+..+
T Consensus 9 ~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l 63 (279)
T cd05111 9 LRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAM 63 (279)
T ss_pred ceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHH
Confidence 344578999999999999873 343 47888886543322225666666443
No 201
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.87 E-value=0.0018 Score=45.96 Aligned_cols=49 Identities=20% Similarity=0.354 Sum_probs=32.2
Q ss_pred CCccCeecccCCceeeeEEc--CCCCEEEEEecCCcchh-HHHHHHHHHHhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL--PDNTQIAVKKPKESDKI-RINQEFQKEMGI 150 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~--~~~~~vavK~l~~~~~~-~~~~~f~~E~~~ 150 (152)
|...+.||+|+||.||++.. .++..||+|.++..... .....+.+|+.+
T Consensus 3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~ 54 (290)
T cd07862 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV 54 (290)
T ss_pred cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHH
Confidence 44457899999999999975 24678999988543221 111445555544
No 202
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=96.87 E-value=0.0017 Score=47.32 Aligned_cols=51 Identities=20% Similarity=0.325 Sum_probs=35.0
Q ss_pred CCCccCeecccCCceeeeEEcCC-CCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.... +..+|+|.+..... ......|.+|+.++
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL 55 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHH
Confidence 34456789999999999998744 67899999854221 11224577776554
No 203
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=96.86 E-value=0.0023 Score=44.24 Aligned_cols=49 Identities=29% Similarity=0.525 Sum_probs=36.9
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|...+.||+|++|.||+|... ++..|++|.++.... ... +.+.+|+..+
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-~~~~~e~~~l 53 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEEL-EALEREIRIL 53 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHH-HHHHHHHHHH
Confidence 445678999999999999985 588999999865442 222 6788887654
No 204
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=96.85 E-value=0.0023 Score=44.64 Aligned_cols=49 Identities=29% Similarity=0.446 Sum_probs=36.3
Q ss_pred CccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||++... ++..+++|.++..... ...+.+.+|+.++
T Consensus 3 ~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~ 53 (264)
T cd06626 3 QRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVL 53 (264)
T ss_pred eeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHH
Confidence 34578999999999999864 5789999998654432 1227788887665
No 205
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=96.85 E-value=0.00052 Score=33.29 Aligned_cols=23 Identities=52% Similarity=0.972 Sum_probs=19.6
Q ss_pred CccceeCCCCceeeCCCCCcCCC
Q 042973 22 EGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 22 ~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
+++|.+..+++.|.|.+||.+++
T Consensus 11 nA~C~~~~~~~~C~C~~Gy~GdG 33 (36)
T PF12947_consen 11 NATCTNTGGSYTCTCKPGYEGDG 33 (36)
T ss_dssp TCEEEE-TTSEEEEE-CEEECCS
T ss_pred CcEeecCCCCEEeECCCCCccCC
Confidence 78999999999999999999986
No 206
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.84 E-value=0.0013 Score=47.20 Aligned_cols=52 Identities=27% Similarity=0.269 Sum_probs=36.1
Q ss_pred hCCCccCeecccCCceeeeEEcC--------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP--------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~--------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+.+...+.||+|+||.||++... ....+|+|.++.........++.+|+.++
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l 77 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 77 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHH
Confidence 34555678999999999998752 23469999997543322226688887655
No 207
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.84 E-value=0.001 Score=46.63 Aligned_cols=49 Identities=22% Similarity=0.304 Sum_probs=35.1
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..+|+|.++....... ..+.+|+.++
T Consensus 11 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~e~~~~ 60 (267)
T cd06645 11 FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF-AVVQQEIIMM 60 (267)
T ss_pred HHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH-HHHHHHHHHH
Confidence 33346789999999999986 4578999999865543333 5567776554
No 208
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=96.83 E-value=0.0025 Score=44.21 Aligned_cols=49 Identities=27% Similarity=0.403 Sum_probs=36.5
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCc--chhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES--DKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~--~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|++|.||++.. .++..+++|.+... ..... .+|.+|++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~-~~~~~e~~~l 53 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRRER-EEAIDEARVL 53 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHH-HHHHHHHHHH
Confidence 44467899999999999987 45789999998543 22233 7788888765
No 209
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=96.83 E-value=0.0024 Score=45.55 Aligned_cols=50 Identities=30% Similarity=0.463 Sum_probs=35.2
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh----HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI----RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~----~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||+|... ++..||+|.++..... .....+..|++++
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l 56 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLL 56 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHH
Confidence 344567999999999999874 5789999999654332 1114566676654
No 210
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=96.82 E-value=0.002 Score=45.25 Aligned_cols=31 Identities=26% Similarity=0.528 Sum_probs=25.8
Q ss_pred ccCeecccCCceeeeEEc-CCCCEEEEEecCC
Q 042973 104 ESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKE 134 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~ 134 (152)
..+.||+|+||.||+|.. .++..+|+|.++.
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~ 36 (272)
T cd06629 5 KGELIGKGTYGRVYLALNVTTGEMMAVKQVEL 36 (272)
T ss_pred ecceecccCceEEEEEeecCCCceeeeeeeec
Confidence 356899999999999975 4588999998853
No 211
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=96.82 E-value=0.0021 Score=52.90 Aligned_cols=50 Identities=32% Similarity=0.551 Sum_probs=37.1
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... .+..||+|+++.... ....+.|.+|++++
T Consensus 4 YeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~IL 56 (932)
T PRK13184 4 YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIA 56 (932)
T ss_pred eEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHH
Confidence 445678999999999999864 478999999964321 12226789998765
No 212
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=96.82 E-value=0.0027 Score=45.39 Aligned_cols=50 Identities=18% Similarity=0.367 Sum_probs=36.9
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|...+.||+|+||.||++.. .++..+|+|.+........ +.|.+|+.++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-~~~~~e~~~l 70 (293)
T cd06647 20 KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKK-ELIINEILVM 70 (293)
T ss_pred hceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHH-HHHHHHHHHH
Confidence 444567899999999999975 4578899999865443333 6788887654
No 213
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=96.82 E-value=0.0027 Score=45.21 Aligned_cols=50 Identities=24% Similarity=0.325 Sum_probs=34.7
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... .+..+|+|.+...... .....+.+|+.+|
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il 54 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQIL 54 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHH
Confidence 334578999999999999874 4789999998543221 1114577787665
No 214
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=96.82 E-value=0.0021 Score=45.94 Aligned_cols=44 Identities=27% Similarity=0.317 Sum_probs=34.0
Q ss_pred eecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 107 FLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 107 ~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.||+|+||.||++.. .++..||+|.+........ ..|.+|+.++
T Consensus 27 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-~~~~~e~~~l 71 (292)
T cd06657 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRR-ELLFNEVVIM 71 (292)
T ss_pred HcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHH-HHHHHHHHHH
Confidence 589999999999987 4678999999865443333 6788887654
No 215
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=96.81 E-value=0.0018 Score=47.76 Aligned_cols=51 Identities=20% Similarity=0.324 Sum_probs=35.5
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... .+..+|+|.++..... .....+.+|+.+|
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDIL 55 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH
Confidence 3455678999999999999874 4789999999643221 1125566776654
No 216
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=96.80 E-value=0.0025 Score=45.81 Aligned_cols=51 Identities=29% Similarity=0.366 Sum_probs=36.9
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
.|...+.||+|.||.||++... ++..||+|.+..... ....+++.+|++++
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l 69 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHH
Confidence 3555678999999999999873 578999998854322 12225788888765
No 217
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=96.80 E-value=0.0024 Score=45.15 Aligned_cols=48 Identities=23% Similarity=0.228 Sum_probs=35.5
Q ss_pred ccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
..+.||+|+||.||++.. .++..||+|.+..... ......|.+|+.++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l 53 (286)
T cd07832 4 ILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKAL 53 (286)
T ss_pred EEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHH
Confidence 356789999999999987 4588999999865432 12226788887664
No 218
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=96.80 E-value=0.0027 Score=46.51 Aligned_cols=53 Identities=17% Similarity=0.338 Sum_probs=37.6
Q ss_pred hhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
.+.|...+.||+|+||.||++.. .++..||||.+..... ......+.+|+.+|
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l 68 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLL 68 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHH
Confidence 34566667899999999999975 4688999999854221 11125677787665
No 219
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=96.79 E-value=0.00055 Score=32.29 Aligned_cols=24 Identities=42% Similarity=1.045 Sum_probs=21.2
Q ss_pred CC--CccceeCC-CCceeeCCCCCcCC
Q 042973 20 HC--EGKCKNTI-GSCTCDCPIGMYGD 43 (152)
Q Consensus 20 ~c--~~~C~~~~-g~~~C~C~~g~~~~ 43 (152)
|| +++|.+.. +.|.|.|+.||.+.
T Consensus 5 ~C~n~g~C~~~~~~~y~C~C~~G~~G~ 31 (32)
T PF00008_consen 5 PCQNGGTCIDLPGGGYTCECPPGYTGK 31 (32)
T ss_dssp SSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred cCCCCeEEEeCCCCCEEeECCCCCccC
Confidence 67 68999988 99999999999875
No 220
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=96.79 E-value=0.0024 Score=45.19 Aligned_cols=45 Identities=27% Similarity=0.462 Sum_probs=34.8
Q ss_pred CeecccCCceeeeEEcCC-CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 106 HFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..||+|+||.||++.... +..+++|.+........ +.|.+|+.++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~e~~~l 56 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEEL-EDYMVEIDIL 56 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHH-HHHHHHHHHH
Confidence 468999999999998744 66889999866554444 7788888765
No 221
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=96.78 E-value=0.0024 Score=46.32 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=26.8
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCC
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKE 134 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~ 134 (152)
|...+.||+|+||.||++... .+..||+|.++.
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~ 35 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKK 35 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence 444678999999999999874 467899999864
No 222
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=96.78 E-value=0.0023 Score=45.23 Aligned_cols=50 Identities=22% Similarity=0.414 Sum_probs=36.3
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..||+|.++..... .....|.+|+++|
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l 53 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 53 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHH
Confidence 44567899999999999987 35789999998643322 1225678888765
No 223
>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=96.78 E-value=0.0012 Score=52.89 Aligned_cols=39 Identities=46% Similarity=0.911 Sum_probs=32.5
Q ss_pred CC--CcccccccCCCCCCCCccceeCCCCceeeCCCCCcCCC
Q 042973 5 AR--VTDIDECLDKEKYHCEGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 5 ~~--C~~~~~C~~~~~~~c~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
+| |++.|+|. ++.++-..+|.|.+|++.|.|.+||.+++
T Consensus 820 DG~~c~dvDeC~-psrChp~A~CyntpgsfsC~C~pGy~GDG 860 (1289)
T KOG1214|consen 820 DGHQCTDVDECS-PSRCHPAATCYNTPGSFSCRCQPGYYGDG 860 (1289)
T ss_pred CccccccccccC-ccccCCCceEecCCCcceeecccCccCCC
Confidence 55 99999996 44333388999999999999999999976
No 224
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=96.77 E-value=0.0025 Score=49.57 Aligned_cols=45 Identities=29% Similarity=0.408 Sum_probs=32.7
Q ss_pred cCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.++||+|.||.|.|+.-. .++.||||+++..-..- ++-..|+.+|
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~--~Q~~~Ei~iL 236 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFL--RQAQIEIRIL 236 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHH--HHHHHHHHHH
Confidence 467999999999999753 37899999997654332 3445566554
No 225
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=96.77 E-value=0.00035 Score=50.22 Aligned_cols=47 Identities=36% Similarity=0.540 Sum_probs=36.6
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|..-..||+|+||.|||+.- ..|..||||.....+.. ++...|+.+|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDL---QEIIKEISIM 82 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDL---QEIIKEISIM 82 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchH---HHHHHHHHHH
Confidence 33345689999999999976 55899999998665443 6788888876
No 226
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.76 E-value=0.0021 Score=46.84 Aligned_cols=51 Identities=25% Similarity=0.287 Sum_probs=35.3
Q ss_pred CCCccCeecccCCceeeeEEcCC--------CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD--------NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~--------~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+...+.||+|+||.||++.... ...||+|.++........++|.+|+.++
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 71 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMM 71 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHH
Confidence 34446789999999999997421 2368999987543332226788888765
No 227
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=96.76 E-value=0.0039 Score=43.62 Aligned_cols=50 Identities=24% Similarity=0.386 Sum_probs=36.2
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch---hH--HHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK---IR--INQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~---~~--~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..+|+|.++.... .+ ..+.|.+|+..|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l 57 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLM 57 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHH
Confidence 45567899999999999975 5678999999854321 11 126788888765
No 228
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=96.75 E-value=0.0021 Score=45.01 Aligned_cols=52 Identities=25% Similarity=0.422 Sum_probs=39.4
Q ss_pred hhhCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++++|...+.||+|+||.||++... ++..+++|.++...... ++|.+|+.++
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~e~~~l 56 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--EEIKEEYNIL 56 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhH--HHHHHHHHHH
Confidence 4566777788999999999999974 46789999986544332 6688887654
No 229
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=96.74 E-value=0.0037 Score=43.20 Aligned_cols=49 Identities=22% Similarity=0.415 Sum_probs=36.5
Q ss_pred CccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
...+.||+|.+|.||++... ++..+++|.+...... .....|.+|++++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (254)
T cd06627 3 QLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLL 53 (254)
T ss_pred eeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHH
Confidence 34578999999999999874 5779999999665431 1226788888765
No 230
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=96.73 E-value=0.0025 Score=44.99 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=34.6
Q ss_pred cCeecccCCceeeeEEcC-CCCEEEEEecCCcc-hhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESD-KIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~-~~~~~~~f~~E~~~l 151 (152)
.+.||+|+||.||++... ++..+|+|.++... ......+|.+|+.++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l 52 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLL 52 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHH
Confidence 457899999999999875 47899999997653 111225677887654
No 231
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=96.72 E-value=0.003 Score=44.63 Aligned_cols=31 Identities=39% Similarity=0.574 Sum_probs=26.1
Q ss_pred cCeecccCCceeeeEEcCC-CCEEEEEecCCc
Q 042973 105 SHFLGEGGFGSVYKGVLPD-NTQIAVKKPKES 135 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~ 135 (152)
.+.||+|+||.||+|...+ +..|++|.+...
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~ 35 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKK 35 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhh
Confidence 5679999999999999854 678999998654
No 232
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=96.72 E-value=0.0032 Score=44.10 Aligned_cols=51 Identities=24% Similarity=0.374 Sum_probs=36.4
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc----hhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD----KIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~----~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++.. .++..+|+|.+.... .......|.+|+.++
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l 58 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLL 58 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHH
Confidence 456678999999999999986 447899999874211 111225788887765
No 233
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.
Probab=96.71 E-value=0.0023 Score=30.80 Aligned_cols=32 Identities=50% Similarity=1.077 Sum_probs=24.9
Q ss_pred cccccCCCCCCC--CccceeCCCCceeeCCCCCcCC
Q 042973 10 IDECLDKEKYHC--EGKCKNTIGSCTCDCPIGMYGD 43 (152)
Q Consensus 10 ~~~C~~~~~~~c--~~~C~~~~g~~~C~C~~g~~~~ 43 (152)
.++|... .+| ++.|.+..+.|.|.|+.|+.+.
T Consensus 2 ~~~C~~~--~~C~~~~~C~~~~~~~~C~C~~g~~g~ 35 (38)
T cd00054 2 IDECASG--NPCQNGGTCVNTVGSYRCSCPPGYTGR 35 (38)
T ss_pred cccCCCC--CCcCCCCEeECCCCCeEeECCCCCcCC
Confidence 4667532 357 6789999999999999998874
No 234
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=96.70 E-value=0.0025 Score=45.22 Aligned_cols=52 Identities=25% Similarity=0.369 Sum_probs=39.7
Q ss_pred hhhCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.++.|...+.+|+|.||.||++... ++..+++|.++.... .. ..|.+|+++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~-~~~~~e~~~l 69 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NK-ELIINEILIM 69 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hH-HHHHHHHHHH
Confidence 4455666678999999999999985 578999999976544 22 6788887765
No 235
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=96.70 E-value=0.003 Score=45.70 Aligned_cols=50 Identities=30% Similarity=0.399 Sum_probs=35.7
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..+|+|.++.... .....+|.+|+.+|
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l 79 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFL 79 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHH
Confidence 44467899999999999986 4578999999854322 11125688887665
No 236
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.69 E-value=0.0032 Score=46.46 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=36.6
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
..|...+.||+|+||.||++.- ..+..||||++..... ......+.+|+.++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 77 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHH
Confidence 4566677899999999999975 3478899999964321 11125677777654
No 237
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.67 E-value=0.0019 Score=47.09 Aligned_cols=57 Identities=19% Similarity=0.304 Sum_probs=40.0
Q ss_pred HHHhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCc-chhHHHHHHHHHHhhh
Q 042973 95 LVKATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES-DKIRINQEFQKEMGIV 151 (152)
Q Consensus 95 l~~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~-~~~~~~~~f~~E~~~l 151 (152)
+...+++|...+.||+|+||.||++.- .++..||+|++... ......+.+.+|+.++
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 63 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLL 63 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHH
Confidence 344566777778999999999999975 46889999988532 1111125677777655
No 238
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=96.67 E-value=0.0017 Score=47.59 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=35.3
Q ss_pred CCCccCeecccCCceeeeEEcCC--CCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD--NTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~--~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+|.....||+|+||.||++...+ +..||+|.+..... ....+.|.+|+.+|
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l 85 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKIL 85 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHH
Confidence 45556789999999999998643 35899999854321 11125677887765
No 239
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=96.66 E-value=0.0032 Score=44.47 Aligned_cols=47 Identities=23% Similarity=0.355 Sum_probs=34.2
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
.+.||+|.+|.||++.. .+|..||+|++...... .....|.+|+..+
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l 52 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLL 52 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHH
Confidence 46799999999999986 46889999998643321 1115677787655
No 240
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=96.66 E-value=0.0025 Score=45.03 Aligned_cols=50 Identities=28% Similarity=0.433 Sum_probs=35.5
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
|.....||+|+||.||++... ++..||+|++..... ....+.|.+|+.++
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l 54 (286)
T cd07847 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRML 54 (286)
T ss_pred eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHH
Confidence 444567999999999999885 478999998854322 11125677887665
No 241
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=96.66 E-value=0.003 Score=43.86 Aligned_cols=50 Identities=22% Similarity=0.393 Sum_probs=35.5
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... ++..+|+|.+...... ...+.+.+|+.++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l 53 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILL 53 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHH
Confidence 444678999999999999984 4788999998543211 1125677887654
No 242
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=96.66 E-value=0.0038 Score=43.42 Aligned_cols=49 Identities=18% Similarity=0.250 Sum_probs=34.6
Q ss_pred CccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||++... .+..+|+|.++........+.+.+|+.++
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l 52 (255)
T cd08219 3 NVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLL 52 (255)
T ss_pred eEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHH
Confidence 33568999999999999863 57889999885433222226677776654
No 243
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=96.65 E-value=0.0033 Score=44.77 Aligned_cols=49 Identities=31% Similarity=0.424 Sum_probs=36.7
Q ss_pred CCccCeecccCCceeeeEEcC------CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP------DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~------~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... +...+++|.++....... +.|.+|+.++
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~e~~~l 61 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR-KDFQREAELL 61 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHH-HHHHHHHHHH
Confidence 444678999999999999742 345689999876555444 6788888765
No 244
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=96.65 E-value=0.003 Score=43.98 Aligned_cols=51 Identities=24% Similarity=0.379 Sum_probs=38.3
Q ss_pred hCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++|...+.+|+|+||.||++... .+..+++|.+........ +.+.+|+.++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~e~~~l 54 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDF-EIIQQEISML 54 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhH-HHHHHHHHHH
Confidence 34555678999999999999873 467899999865544433 7788887765
No 245
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=96.65 E-value=0.0032 Score=50.39 Aligned_cols=46 Identities=26% Similarity=0.442 Sum_probs=39.6
Q ss_pred cCeecccCCceeeeEEcCCC-CEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLPDN-TQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~-~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.|.+|+|+.||.+....+ ..+|+|++-..+..+. +...+|+.+|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L-~~v~~EI~~M 88 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEAL-NAVKREIDIM 88 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHH-HHHHHHHHHH
Confidence 56799999999999998665 8999999977777776 8899999887
No 246
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=96.64 E-value=0.0053 Score=41.50 Aligned_cols=47 Identities=34% Similarity=0.467 Sum_probs=36.1
Q ss_pred ccCeecccCCceeeeEEcCC-CCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
..+.||+|++|.||++...+ +..+|+|.+...... .. +.+.+|++.+
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~-~~~~~e~~~~ 51 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQR-EEFLREIRIL 51 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHH-HHHHHHHHHH
Confidence 35678999999999999865 789999999765443 33 6777777654
No 247
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=96.64 E-value=0.0023 Score=45.30 Aligned_cols=50 Identities=28% Similarity=0.440 Sum_probs=36.4
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
|...+.||+|.||.||++... ++..||+|.++.... ....+.|.+|+.+|
T Consensus 3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l 54 (288)
T cd07833 3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVL 54 (288)
T ss_pred eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHH
Confidence 445678999999999999875 477999999864322 11226788888765
No 248
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.63 E-value=0.0038 Score=44.70 Aligned_cols=50 Identities=16% Similarity=0.353 Sum_probs=36.9
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+...+.||+|+||.||++.. .++..+|+|.+........ ..|.+|+.++
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~-~~~~~e~~~l 71 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIINEILVM 71 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchH-HHHHHHHHHH
Confidence 344456799999999999985 4578999999865444333 6677887654
No 249
>smart00090 RIO RIO-like kinase.
Probab=96.63 E-value=0.0059 Score=42.67 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=27.9
Q ss_pred CCccCeecccCCceeeeEE--cCCCCEEEEEecCC
Q 042973 102 YDESHFLGEGGFGSVYKGV--LPDNTQIAVKKPKE 134 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~--~~~~~~vavK~l~~ 134 (152)
+...+.||+|+||.||++. ..+|..||+|.++.
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~ 64 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRT 64 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEc
Confidence 3445789999999999998 67899999999864
No 250
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=96.63 E-value=0.003 Score=45.87 Aligned_cols=46 Identities=26% Similarity=0.259 Sum_probs=31.7
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGI 150 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~ 150 (152)
.+.||+|+||.||++.. .++..||||.++.... ....+.+.+|..+
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~ 52 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRI 52 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHH
Confidence 46799999999999987 4578999999964321 1111455556543
No 251
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=96.62 E-value=0.0026 Score=45.33 Aligned_cols=51 Identities=27% Similarity=0.463 Sum_probs=36.5
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
+|...+.||+|.+|.||+|... ++..||+|.++..... .....|.+|+.++
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l 55 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLL 55 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHH
Confidence 3555678999999999999874 5789999998543221 1125677787665
No 252
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=96.61 E-value=0.0036 Score=46.00 Aligned_cols=53 Identities=19% Similarity=0.218 Sum_probs=37.0
Q ss_pred hhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
...|...+.||+|+||.||++.- ..+..||||.++.... ......+.+|+.+|
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 70 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 70 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHH
Confidence 34566667899999999999975 3478899999964322 12125677777654
No 253
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=96.61 E-value=0.0029 Score=44.82 Aligned_cols=32 Identities=28% Similarity=0.505 Sum_probs=26.3
Q ss_pred CccCeecccCCceeeeEEcC-CCCEEEEEecCC
Q 042973 103 DESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKE 134 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~ 134 (152)
...+.||+|+||.||++... ++..||+|.++.
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~ 35 (288)
T cd07863 3 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV 35 (288)
T ss_pred eEeeEEeecCCeEEEEEEECCCCcEEEEEEecc
Confidence 34567999999999999864 578999999864
No 254
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=96.57 E-value=0.0029 Score=45.33 Aligned_cols=45 Identities=27% Similarity=0.229 Sum_probs=33.8
Q ss_pred CeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 106 HFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..||+|+||.||++.. .++..||+|.++....... ..+.+|+.++
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-~~~~~e~~~l 72 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRR-ELLFNEVVIM 72 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchH-HHHHHHHHHH
Confidence 4689999999999986 4588999999865443333 6677777654
No 255
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=96.57 E-value=0.0036 Score=44.95 Aligned_cols=48 Identities=27% Similarity=0.393 Sum_probs=34.1
Q ss_pred CccCeecccCCceeeeEEcC---CCCEEEEEecCCcc---hhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP---DNTQIAVKKPKESD---KIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~---~~~~vavK~l~~~~---~~~~~~~f~~E~~~l 151 (152)
.....||+|+||.||++... .+..+|+|.+.... .... ..+.+|+.++
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~-~~~~~e~~~l 56 (316)
T cd07842 3 EIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGIS-QSACREIALL 56 (316)
T ss_pred eEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCcc-HHHHHHHHHH
Confidence 33567999999999999974 47899999996532 2112 5566676554
No 256
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.56 E-value=0.001 Score=50.27 Aligned_cols=30 Identities=40% Similarity=0.589 Sum_probs=25.4
Q ss_pred CeecccCCceeeeEEc-CCCCEEEEEecCCc
Q 042973 106 HFLGEGGFGSVYKGVL-PDNTQIAVKKPKES 135 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~ 135 (152)
+.||.|.||.||+|+- ..+..||||+++..
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~K 46 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKK 46 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhh
Confidence 4689999999999985 55888999999654
No 257
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=96.56 E-value=0.0045 Score=48.30 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=29.7
Q ss_pred CCCccCeecccCCceeeeEEcCC-CCEEEEEecCCcc
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESD 136 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~ 136 (152)
.|+. +.+|+|++|.||++++.+ |+.||||.++...
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i 156 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDI 156 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcch
Confidence 4554 578999999999999987 9999999997643
No 258
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=96.56 E-value=0.0027 Score=47.47 Aligned_cols=50 Identities=24% Similarity=0.367 Sum_probs=38.0
Q ss_pred CCccCeecccCCceeeeEEcCC-CCEEEEEecCCcchhH--HHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIR--INQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~--~~~~f~~E~~~l 151 (152)
+...+.||.|.||.||+..-+. |..+|+|.+....... ...+..+|+.+|
T Consensus 37 Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il 89 (382)
T KOG0032|consen 37 YELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAIL 89 (382)
T ss_pred EEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHH
Confidence 4445789999999999998766 8899999995433322 226888999887
No 259
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=96.56 E-value=0.0056 Score=42.53 Aligned_cols=48 Identities=23% Similarity=0.304 Sum_probs=34.5
Q ss_pred ccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
..+.||.|+||.||++.. .++..+|+|.++.... ....+.+.+|+.+|
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l 53 (265)
T cd08217 4 VLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNIL 53 (265)
T ss_pred eeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHH
Confidence 356789999999999976 4578899999864322 22226688887665
No 260
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.54 E-value=0.0038 Score=45.39 Aligned_cols=50 Identities=16% Similarity=0.281 Sum_probs=33.4
Q ss_pred CCccCeecccCCceeeeEEc----CCCCEEEEEecCCcch---hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL----PDNTQIAVKKPKESDK---IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~----~~~~~vavK~l~~~~~---~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. ..+..+|+|.++.... ....+.+..|+.+|
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l 58 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVL 58 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHH
Confidence 34457899999999998865 3578999999854321 11114566676554
No 261
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=96.53 E-value=0.0042 Score=43.79 Aligned_cols=46 Identities=24% Similarity=0.164 Sum_probs=31.2
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGI 150 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~ 150 (152)
.+.||+|.||.||++.. .++..+|+|.++............+|+..
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~ 50 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQA 50 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHH
Confidence 45789999999999986 45789999998653222111334455544
No 262
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=96.53 E-value=0.005 Score=43.19 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=26.5
Q ss_pred CCccCeecccCCceeeeEEcCC--CCEEEEEecCC
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD--NTQIAVKKPKE 134 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~--~~~vavK~l~~ 134 (152)
|...+.||+|+||.||++.... +..+|+|.+..
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~ 36 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINV 36 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeec
Confidence 3445679999999999999854 67899998753
No 263
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=96.53 E-value=0.0054 Score=43.06 Aligned_cols=50 Identities=20% Similarity=0.290 Sum_probs=35.5
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... ++..+|+|.+.... .......+.+|+.++
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~ 55 (280)
T cd05581 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVL 55 (280)
T ss_pred ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHH
Confidence 444678999999999999874 58899999985422 122225677777654
No 264
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.53 E-value=0.0037 Score=44.80 Aligned_cols=50 Identities=16% Similarity=0.351 Sum_probs=37.3
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+|.....||.|.||.||++.. .++..||+|.+........ +.+.+|+.++
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~-~~~~~e~~~l 70 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKK-ELIINEILVM 70 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchH-HHHHHHHHHH
Confidence 355556799999999999975 5688999999865444333 6778887654
No 265
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=96.52 E-value=0.0044 Score=44.31 Aligned_cols=45 Identities=29% Similarity=0.276 Sum_probs=33.9
Q ss_pred CeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 106 HFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..||+|+||.||++.. ..+..||+|.+........ +.|.+|+..+
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~e~~~l 73 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR-ELLFNEVVIM 73 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHH-HHHHHHHHHH
Confidence 4689999999999976 4578999999865444333 6688887654
No 266
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=96.52 E-value=0.0051 Score=43.42 Aligned_cols=47 Identities=28% Similarity=0.370 Sum_probs=32.8
Q ss_pred ccCeecccCCceeeeEEcCC-CCEEEEEecCCcchh-HHHHHHHHHHhh
Q 042973 104 ESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKI-RINQEFQKEMGI 150 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~-~~~~~f~~E~~~ 150 (152)
..+.||+|+||.||++.... +..+|+|.++..... .....+.+|+.+
T Consensus 3 ~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~ 51 (287)
T cd07838 3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIAL 51 (287)
T ss_pred EEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHH
Confidence 35679999999999999854 889999999643221 111455566543
No 267
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=96.52 E-value=0.0046 Score=43.68 Aligned_cols=49 Identities=24% Similarity=0.413 Sum_probs=34.5
Q ss_pred CccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
...+.||+|++|.||+|... ++..||+|.++..... .....+.+|+.++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (285)
T cd07861 3 TKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLL 53 (285)
T ss_pred eEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHH
Confidence 34567999999999999874 5889999998643221 1115677777654
No 268
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.52 E-value=0.0045 Score=43.99 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=34.3
Q ss_pred CccCeecccCCceeeeEEc----CCCCEEEEEecCCcchh---HHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVL----PDNTQIAVKKPKESDKI---RINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~----~~~~~vavK~l~~~~~~---~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||.+.. ++|..||+|.++..... ...+.+.+|+.+|
T Consensus 3 ~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l 58 (290)
T cd05613 3 ELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 58 (290)
T ss_pred eeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHH
Confidence 3456799999999999875 46889999998653221 1125567777654
No 269
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=96.50 E-value=0.0032 Score=45.23 Aligned_cols=52 Identities=21% Similarity=0.412 Sum_probs=35.8
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
++|...+.||+|+||.||++.. ..+..||+|.++..... .....+.+|+.++
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 60 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLL 60 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHH
Confidence 4566677899999999999987 45889999998643221 1113455666544
No 270
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=96.47 E-value=0.0053 Score=44.23 Aligned_cols=51 Identities=22% Similarity=0.363 Sum_probs=36.6
Q ss_pred CCCccCeecccCCceeeeEEcCC-CCEEEEEecCCcchhH--HHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIR--INQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~--~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++...+ +..+|+|.+....... ..+.+..|+++|
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEIL 55 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHH
Confidence 34456789999999999998754 7899999996533221 225677777655
No 271
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=96.44 E-value=0.0062 Score=44.14 Aligned_cols=49 Identities=18% Similarity=0.301 Sum_probs=35.6
Q ss_pred CccCeecccCCceeeeEEcCC-CCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||++.... +..+|+|.+..... ....+.|.+|++.+
T Consensus 3 ~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l 53 (330)
T cd07834 3 ELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLL 53 (330)
T ss_pred eeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHH
Confidence 345689999999999999744 78999999865432 12226677777654
No 272
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=96.43 E-value=0.0047 Score=47.36 Aligned_cols=37 Identities=24% Similarity=0.388 Sum_probs=29.9
Q ss_pred hCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcc
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESD 136 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~ 136 (152)
++|..-..||+|+||+||.+.-. .|..+|+|+|+...
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~ 178 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSE 178 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHH
Confidence 45666678999999999998764 48899999997644
No 273
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=96.41 E-value=0.0067 Score=42.15 Aligned_cols=49 Identities=27% Similarity=0.354 Sum_probs=35.6
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCc--chhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES--DKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~--~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.+|++.. .++..+|+|.+... ..... .++.+|+.++
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~-~~~~~e~~~l 53 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKER-EESRKEVAVL 53 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHH-HHHHHHHHHH
Confidence 34467899999999999876 45789999998543 22222 6788887665
No 274
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.41 E-value=0.005 Score=44.95 Aligned_cols=50 Identities=22% Similarity=0.375 Sum_probs=35.4
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
.|.....||+|+||.||++.- ..+..||+|.++... .... ..+.+|+.+|
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~E~~~l 58 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDA-KRTLREIKLL 58 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchh-HHHHHHHHHH
Confidence 455567899999999999985 457899999986432 2222 4566676654
No 275
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=96.41 E-value=0.0078 Score=41.72 Aligned_cols=50 Identities=20% Similarity=0.278 Sum_probs=35.8
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. ..+..+|+|.+..... ......|.+|+.+|
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVL 53 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHH
Confidence 34457899999999999876 4577899999854321 12226788888765
No 276
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=96.39 E-value=0.0049 Score=43.88 Aligned_cols=50 Identities=20% Similarity=0.248 Sum_probs=35.8
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++... ++..+|+|.++.... ......+.+|+++|
T Consensus 3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (290)
T cd05580 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRIL 55 (290)
T ss_pred eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH
Confidence 444678999999999999874 578999999854321 11225677887665
No 277
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=96.39 E-value=0.0071 Score=43.01 Aligned_cols=49 Identities=29% Similarity=0.274 Sum_probs=36.0
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+..-+.||+|++|.||++.. .++..+++|.++....... +.+.+|+.++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~-~~~~~e~~~l 70 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRR-ELLFNEVVIM 70 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHH-HHHHHHHHHH
Confidence 33346899999999999985 4578899999865444333 6677887654
No 278
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=96.39 E-value=0.0078 Score=41.95 Aligned_cols=52 Identities=23% Similarity=0.397 Sum_probs=37.1
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh----HHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI----RINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~----~~~~~f~~E~~~l 151 (152)
++|...+.||+|++|.||++.. ..+..+|+|.++..... .....+.+|+.++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l 58 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLL 58 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHH
Confidence 3566678999999999999986 45789999988543211 1115677787655
No 279
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=96.36 E-value=0.0041 Score=43.98 Aligned_cols=49 Identities=20% Similarity=0.403 Sum_probs=34.0
Q ss_pred CccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
...+.||+|.||.||++.. .+|..+|+|.++..... .....+.+|+.+|
T Consensus 3 ~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l 53 (284)
T cd07839 3 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLL 53 (284)
T ss_pred eeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHH
Confidence 3356799999999999987 45889999998543221 1114566676654
No 280
>PHA03212 serine/threonine kinase US3; Provisional
Probab=96.35 E-value=0.0045 Score=46.38 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=33.4
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..|...+.||+|+||.||++.- ..+..||+|.... ..+.+|+.+|
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-------~~~~~E~~il 137 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-------GGTATEAHIL 137 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-------hhhHHHHHHH
Confidence 3466677899999999999975 4578899997542 4456676655
No 281
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=96.33 E-value=0.0064 Score=44.27 Aligned_cols=52 Identities=19% Similarity=0.398 Sum_probs=37.1
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
.+|...+.||+|+||.||++.. ..+..||+|++...... .....+.+|+.+|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l 58 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKIL 58 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHH
Confidence 4566677899999999999986 35889999998653221 1125566777655
No 282
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.32 E-value=0.0041 Score=45.31 Aligned_cols=50 Identities=24% Similarity=0.401 Sum_probs=35.0
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCc--chhHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKES--DKIRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~--~~~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||+|... ++..+|+|++... +.... ..+.+|+.++
T Consensus 8 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~-~~~~~E~~~l 60 (337)
T cd07852 8 KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDA-QRTFREIMFL 60 (337)
T ss_pred HHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhh-hhhhHHHHHH
Confidence 4445678999999999999874 4788999988532 22222 4566777654
No 283
>PRK10345 hypothetical protein; Provisional
Probab=96.31 E-value=0.0079 Score=41.30 Aligned_cols=47 Identities=21% Similarity=0.288 Sum_probs=32.4
Q ss_pred CCccCeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
++....||+|+||.||. .+.....+||++........ +++.+|+.+|
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~-~~~~rEi~~l 50 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGD-KEIRRELKYY 50 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchH-HHHHHHHHHH
Confidence 34567899999999996 33333347998865433333 7788888765
No 284
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=96.31 E-value=0.0045 Score=44.06 Aligned_cols=51 Identities=24% Similarity=0.380 Sum_probs=35.5
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhH-HHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIR-INQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~-~~~~f~~E~~~l 151 (152)
+|...+.||+|.||.||++... ++..+|+|.++...... ....+.+|+.+|
T Consensus 6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 58 (293)
T cd07843 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINIL 58 (293)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHH
Confidence 3445678999999999999985 47889999996433221 114566776554
No 285
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=96.31 E-value=0.008 Score=44.17 Aligned_cols=52 Identities=19% Similarity=0.273 Sum_probs=37.0
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc-hhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD-KIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~-~~~~~~~f~~E~~~l 151 (152)
..|...+.||+|+||.||++.- ..+..||+|.+.... .......+.+|+.++
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 69 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLM 69 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHH
Confidence 4566667899999999999986 458899999985421 212125677777665
No 286
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=96.30 E-value=0.0078 Score=41.93 Aligned_cols=50 Identities=18% Similarity=0.220 Sum_probs=35.9
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
|...+.||.|+||.||++... ++..+|+|.+..... ....+.+.+|+..+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l 54 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRIL 54 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHH
Confidence 344578999999999999874 478999999864321 11226788887654
No 287
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=96.29 E-value=0.0041 Score=44.46 Aligned_cols=52 Identities=29% Similarity=0.401 Sum_probs=35.8
Q ss_pred hCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhH-HHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIR-INQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~-~~~~f~~E~~~l 151 (152)
++|...+.||+|+||.||++... ++..+|+|.+......+ ....+.+|++++
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 61 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKIL 61 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHH
Confidence 45666778999999999999873 57889999885432211 114556666554
No 288
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=96.29 E-value=0.011 Score=41.12 Aligned_cols=46 Identities=35% Similarity=0.488 Sum_probs=31.9
Q ss_pred cCeecccCCceeeeEEcCC-CCEEEEEecCCcchhHHH-HHHHHHHhh
Q 042973 105 SHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRIN-QEFQKEMGI 150 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~-~~f~~E~~~ 150 (152)
.+.||+|+||.||++.... +..+|+|.++........ ....+|+.+
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~ 51 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKI 51 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhc
Confidence 4679999999999999855 458999999765544321 233345543
No 289
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=96.26 E-value=0.0098 Score=41.08 Aligned_cols=50 Identities=24% Similarity=0.357 Sum_probs=35.6
Q ss_pred CCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
|...+.||.|+||.||++... ++..+++|.+...... ....++.+|++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKIL 53 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHH
Confidence 344567999999999999974 4789999999654331 2226677777654
No 290
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=96.23 E-value=0.01 Score=42.91 Aligned_cols=47 Identities=36% Similarity=0.435 Sum_probs=33.5
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
.+.||+|+||.||+|.. ..+..|++|.+...... ....++.+|++++
T Consensus 26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l 75 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFL 75 (313)
T ss_pred ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHH
Confidence 46799999999999986 35788999998543221 1115677777654
No 291
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=96.23 E-value=0.0062 Score=44.31 Aligned_cols=31 Identities=35% Similarity=0.415 Sum_probs=25.6
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCc
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES 135 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~ 135 (152)
.+.||+|+||.||++.. ..+..||+|.++..
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~ 45 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKII 45 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeecc
Confidence 45799999999999985 35889999998543
No 292
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.19 E-value=0.0072 Score=48.52 Aligned_cols=51 Identities=25% Similarity=0.352 Sum_probs=35.8
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... .+..||+|.++.... ......|..|+.+|
T Consensus 5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l 58 (669)
T cd05610 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDAL 58 (669)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHH
Confidence 4555678999999999999874 578999999864321 11125666776554
No 293
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=96.17 E-value=0.007 Score=43.25 Aligned_cols=51 Identities=24% Similarity=0.389 Sum_probs=35.0
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
+|.....||+|+||.||++.. .++..||+|.+...... .....+.+|+.++
T Consensus 13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l 65 (310)
T cd07865 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKIL 65 (310)
T ss_pred heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHH
Confidence 455567899999999999987 35789999988543221 1113455666654
No 294
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=96.16 E-value=0.0089 Score=42.42 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=33.5
Q ss_pred ccCeecccCCceeeeEEc----CCCCEEEEEecCCcch---hHHHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVL----PDNTQIAVKKPKESDK---IRINQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~----~~~~~vavK~l~~~~~---~~~~~~f~~E~~~l 151 (152)
..+.||+|+||.||++.. .++..+|||.++.... ....+.|.+|+.++
T Consensus 4 ~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l 58 (288)
T cd05583 4 LLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVL 58 (288)
T ss_pred EEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHH
Confidence 356799999999999875 3467899999864322 11125677777654
No 295
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=96.16 E-value=0.01 Score=42.62 Aligned_cols=51 Identities=22% Similarity=0.371 Sum_probs=36.1
Q ss_pred CCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 101 NYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
+|...+.||+|+||.||++... .+..||+|.+...... .....+.+|+.++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l 55 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDIL 55 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHH
Confidence 3455678999999999999863 4678999998654321 1125677787654
No 296
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.10 E-value=0.0086 Score=45.23 Aligned_cols=53 Identities=23% Similarity=0.287 Sum_probs=40.0
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
..+....+||.|.-+.||+|.- |-+..||||++.-..-+..-++..+|+..||
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~ms 79 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMS 79 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhh
Confidence 3455567899999999999975 6789999999965433332377888988775
No 297
>PHA03211 serine/threonine kinase US3; Provisional
Probab=96.10 E-value=0.0063 Score=46.69 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=26.9
Q ss_pred CCCccCeecccCCceeeeEEcCC-CCEEEEEecC
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPK 133 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~ 133 (152)
+|.....||+|+||.||++..+. +..||||...
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~ 203 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW 203 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc
Confidence 56666789999999999998854 6789999643
No 298
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.09 E-value=0.0095 Score=41.91 Aligned_cols=47 Identities=28% Similarity=0.405 Sum_probs=33.6
Q ss_pred cCeecccCCceeeeEEcCC-CCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
...||+|.||.||++.... +..+|+|.++.... ......+..|+.++
T Consensus 4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l 52 (282)
T cd07829 4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLL 52 (282)
T ss_pred ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHH
Confidence 4578999999999999854 88999999865431 11115666776654
No 299
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=96.09 E-value=0.011 Score=43.31 Aligned_cols=52 Identities=19% Similarity=0.364 Sum_probs=36.9
Q ss_pred hhCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
.++|.....||+|+||.||++... ++..||+|.+.... .... ..+.+|+.++
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~-~~~~~E~~~l 68 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHA-KRTYRELRLL 68 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHH-HHHHHHHHHH
Confidence 345666678999999999999874 47889999986432 2222 5566777654
No 300
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=96.07 E-value=0.0078 Score=43.32 Aligned_cols=50 Identities=26% Similarity=0.377 Sum_probs=34.7
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||+|.. .++..+|+|.+.... ......+|.+|+.++
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l 69 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHH
Confidence 33356789999999999986 357789999885321 112225677887665
No 301
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.05 E-value=0.012 Score=42.78 Aligned_cols=50 Identities=20% Similarity=0.340 Sum_probs=34.0
Q ss_pred CCccCeecccCCceeeeEEcCC---CCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD---NTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~---~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.... +..+|+|.++..... ...+.+.+|+.++
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l 55 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLL 55 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHH
Confidence 3345679999999999999743 668999998643211 1125677777654
No 302
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=96.02 E-value=0.016 Score=40.24 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=35.1
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc--hhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD--KIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~--~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||.... .++..+++|.+.... .... .+|.+|+.+|
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~-~~~~~e~~~l 53 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKER-RDALNEIVIL 53 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHH-HHHHHHHHHH
Confidence 34457899999998887765 457889999875432 2233 6788888765
No 303
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=95.97 E-value=0.011 Score=27.80 Aligned_cols=25 Identities=52% Similarity=1.031 Sum_probs=21.3
Q ss_pred CCC--CccceeCCCCceeeCCCCCcCC
Q 042973 19 YHC--EGKCKNTIGSCTCDCPIGMYGD 43 (152)
Q Consensus 19 ~~c--~~~C~~~~g~~~C~C~~g~~~~ 43 (152)
.+| ++.|.+..+.+.|.|+.|+.+.
T Consensus 6 ~~C~~~~~C~~~~~~~~C~C~~g~~g~ 32 (36)
T cd00053 6 NPCSNGGTCVNTPGSYRCVCPPGYTGD 32 (36)
T ss_pred CCCCCCCEEecCCCCeEeECCCCCccc
Confidence 356 4889999999999999999876
No 304
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=95.96 E-value=0.016 Score=40.14 Aligned_cols=50 Identities=28% Similarity=0.395 Sum_probs=35.2
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.. .++..+++|.+..... .....++.+|+.++
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRIL 53 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHH
Confidence 34457899999999999875 4578899999864322 12226777887654
No 305
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=95.95 E-value=0.016 Score=40.18 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=34.2
Q ss_pred CccCeecccCCceeeeEEcC-CCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
...+.||+|++|.||++... ++..+|+|.+..... ....+.+.+|+.++
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l 53 (257)
T cd08223 3 CFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLL 53 (257)
T ss_pred eEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHH
Confidence 34568999999999999863 467899999854322 12225677777654
No 306
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.89 E-value=0.011 Score=46.66 Aligned_cols=52 Identities=27% Similarity=0.355 Sum_probs=35.0
Q ss_pred hCCCccCeecccCCceeeeEEcC-CCCEEEEEecCCcchhH--HHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIR--INQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~--~~~~f~~E~~~l 151 (152)
++|....+||+|.||.|+.+.+. .++..|||.|+...--+ +.+....|.+++
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~ 422 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIF 422 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHH
Confidence 34555668999999999999983 46789999996543211 114455555543
No 307
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=95.84 E-value=0.02 Score=40.28 Aligned_cols=47 Identities=28% Similarity=0.345 Sum_probs=33.8
Q ss_pred cCeecccCCceeeeEEcC-CCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
.+.||+|++|.||++... ++..+++|.++..... .....+.+|+.+|
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 52 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLL 52 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHH
Confidence 357899999999999874 5788999998654332 1125677777654
No 308
>PF12955 DUF3844: Domain of unknown function (DUF3844); InterPro: IPR024382 This presumed domain is found in fungal species. It contains 8 largely conserved cysteine residues. This domain is found in proteins thought to be located in the endoplasmic reticulum.
Probab=95.81 E-value=0.013 Score=35.27 Aligned_cols=32 Identities=22% Similarity=0.618 Sum_probs=19.8
Q ss_pred cccccCCCCCCC--CccceeCC-----CCceeeCCCCCcC
Q 042973 10 IDECLDKEKYHC--EGKCKNTI-----GSCTCDCPIGMYG 42 (152)
Q Consensus 10 ~~~C~~~~~~~c--~~~C~~~~-----g~~~C~C~~g~~~ 42 (152)
.++|.+.. ..| ||.|.... .-|.|.|......
T Consensus 5 ~~aC~~~T-n~CsgHG~C~~~~~~~~~~C~~C~C~~T~~~ 43 (103)
T PF12955_consen 5 NDACENAT-NNCSGHGSCVKKYGSGGGDCFACKCKPTVVK 43 (103)
T ss_pred HHHHHHhc-cCCCCCceEeeccCCCccceEEEEeeccccc
Confidence 45665432 346 88998762 4467999775443
No 309
>PHA02882 putative serine/threonine kinase; Provisional
Probab=95.76 E-value=0.0092 Score=42.70 Aligned_cols=32 Identities=28% Similarity=0.560 Sum_probs=23.5
Q ss_pred CCCccCeecccCCceeeeEEcCCC----CEEEEEec
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPDN----TQIAVKKP 132 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~~----~~vavK~l 132 (152)
.|...+.||+|+||.||++...+. ..+|+|..
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~ 48 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIE 48 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEec
Confidence 455567899999999999997543 35566653
No 310
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=95.73 E-value=0.013 Score=45.50 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=29.1
Q ss_pred CeecccCCceeeeEEcCCCCEEEEEecCCcchh
Q 042973 106 HFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKI 138 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~ 138 (152)
+-++.++.|.||+|++.+|+.||||..+..-..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~ 163 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRE 163 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHH
Confidence 568999999999999999999999999876543
No 311
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=95.72 E-value=0.013 Score=42.82 Aligned_cols=49 Identities=20% Similarity=0.356 Sum_probs=33.6
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCc--chhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES--DKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~--~~~~~~~~f~~E~~~l 151 (152)
+...+.||+|+||.|.++.- ++|..||||++... +.... +.-.+|+.+|
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~a-kRtlRElklL 75 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDA-KRTLRELKLL 75 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHH-HHHHHHHHHH
Confidence 33346799999999999976 56899999999632 22222 4455666554
No 312
>PHA03209 serine/threonine kinase US3; Provisional
Probab=95.70 E-value=0.013 Score=43.29 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=27.5
Q ss_pred hCCCccCeecccCCceeeeEEcCC-CCEEEEEecCC
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKE 134 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~ 134 (152)
.+|...+.||+|+||.||++.... +..||+|....
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~ 101 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK 101 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc
Confidence 346667789999999999998743 56899997543
No 313
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=95.68 E-value=0.0054 Score=46.06 Aligned_cols=47 Identities=19% Similarity=0.298 Sum_probs=34.8
Q ss_pred CeecccCCceeeeEEc-CCCCEEEEEecCCcchhHH--HHHHHHHHhhhC
Q 042973 106 HFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRI--NQEFQKEMGIVL 152 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~--~~~f~~E~~~ls 152 (152)
+.||+|.||.|-++.- ..|+.||||.++...-.+. --...+|+++||
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMS 108 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMS 108 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHh
Confidence 4589999999998865 5689999999965432222 034678999886
No 314
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=95.65 E-value=0.015 Score=48.58 Aligned_cols=55 Identities=16% Similarity=0.216 Sum_probs=38.7
Q ss_pred HhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 97 KATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 97 ~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
.....|.....||+|+||.||++.. ..+..+|+|.+..... ......|..|+.+|
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL 66 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVM 66 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHH
Confidence 3344566677899999999999986 3466889998854321 12226788888765
No 315
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=95.64 E-value=0.03 Score=39.14 Aligned_cols=48 Identities=25% Similarity=0.498 Sum_probs=33.1
Q ss_pred ccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhH--------HHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIR--------INQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~--------~~~~f~~E~~~l 151 (152)
....||+|+||.||+|.. .++..+|+|.+....... ..+.|.+|+.++
T Consensus 4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l 60 (267)
T cd06628 4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALL 60 (267)
T ss_pred ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHH
Confidence 356899999999999986 357889999885432210 114577777654
No 316
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=95.62 E-value=0.01 Score=43.44 Aligned_cols=52 Identities=19% Similarity=0.310 Sum_probs=35.3
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+.|...++||+|+||+||...- +.++..|+|.|+...- ..+.+...+|..+|
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL 79 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNIL 79 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHH
Confidence 4577778999999999998865 3477899999954321 11114455555554
No 317
>PF12662 cEGF: Complement Clr-like EGF-like
Probab=95.46 E-value=0.015 Score=25.36 Aligned_cols=20 Identities=35% Similarity=0.688 Sum_probs=15.6
Q ss_pred CceeeCCCCCcCCC-CCccCC
Q 042973 31 SCTCDCPIGMYGDG-KVDCRG 50 (152)
Q Consensus 31 ~~~C~C~~g~~~~~-~~~c~~ 50 (152)
+|.|.|++||...+ +..|..
T Consensus 1 sy~C~C~~Gy~l~~d~~~C~D 21 (24)
T PF12662_consen 1 SYTCSCPPGYQLSPDGRSCED 21 (24)
T ss_pred CEEeeCCCCCcCCCCCCcccc
Confidence 58999999998765 666753
No 318
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=95.43 E-value=0.027 Score=43.37 Aligned_cols=49 Identities=12% Similarity=0.153 Sum_probs=35.0
Q ss_pred CCccCeecccCCceeeeEEcC-C-CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVLP-D-NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~-~-~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
|...+.||+|+||.||++.-. + +..||+|.+........ ..+.+|+.+|
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~-~~~~~E~~~l 119 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQA-AYARSELHCL 119 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHH-HHHHHHHHHH
Confidence 444668999999999999752 2 56788887755444433 6677888765
No 319
>PTZ00382 Variant-specific surface protein (VSP); Provisional
Probab=95.37 E-value=0.016 Score=34.73 Aligned_cols=10 Identities=30% Similarity=0.617 Sum_probs=6.0
Q ss_pred eCCCCCcCCC
Q 042973 35 DCPIGMYGDG 44 (152)
Q Consensus 35 ~C~~g~~~~~ 44 (152)
.|..||..++
T Consensus 41 ~C~~GY~~~~ 50 (96)
T PTZ00382 41 ECNSGFSLDN 50 (96)
T ss_pred cCcCCcccCC
Confidence 5667766544
No 320
>KOG4260 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.28 E-value=0.01 Score=41.78 Aligned_cols=36 Identities=31% Similarity=0.585 Sum_probs=30.8
Q ss_pred CcccccccCCCCCCC--CccceeCCCCceeeCCCCCcCC
Q 042973 7 VTDIDECLDKEKYHC--EGKCKNTIGSCTCDCPIGMYGD 43 (152)
Q Consensus 7 C~~~~~C~~~~~~~c--~~~C~~~~g~~~C~C~~g~~~~ 43 (152)
|.|+|||... +.|| +..|.|..|+|.|.+.+||.+.
T Consensus 233 CvDvnEC~~e-p~~c~~~qfCvNteGSf~C~dk~Gy~~g 270 (350)
T KOG4260|consen 233 CVDVNECQNE-PAPCKAHQFCVNTEGSFKCEDKEGYKKG 270 (350)
T ss_pred cccHHHHhcC-CCCCChhheeecCCCceEecccccccCC
Confidence 9999999864 3467 8889999999999999888773
No 321
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=95.14 E-value=0.028 Score=42.21 Aligned_cols=47 Identities=28% Similarity=0.359 Sum_probs=33.0
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcc-hh-H----HHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD-KI-R----INQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~-~~-~----~~~~f~~E~~~l 151 (152)
.+.||+|+||.|-.|.= ..|..||||.++..- .. . ...+..+|+++|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieIL 230 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEIL 230 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHH
Confidence 56799999999998864 458899999994321 11 1 113356888887
No 322
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.09 E-value=0.005 Score=48.77 Aligned_cols=45 Identities=29% Similarity=0.485 Sum_probs=34.4
Q ss_pred eecccCCceeeeEEcCCC-CEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 107 FLGEGGFGSVYKGVLPDN-TQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 107 ~ig~g~~g~Vy~g~~~~~-~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
.||.|+||.|||+.-.+- ..-|.|.+...+.... .+|+-|+++|+
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEEL-EDylVEIeILa 84 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEEL-EDYLVEIEILA 84 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHH-hhhhhhhhhhh
Confidence 469999999999987543 3446788866666555 89999999875
No 323
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=95.07 E-value=0.034 Score=43.51 Aligned_cols=48 Identities=15% Similarity=0.220 Sum_probs=29.0
Q ss_pred CccCeecccCCceeeeEEcCCCCEEEEEec-C-Ccc-----hhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVLPDNTQIAVKKP-K-ESD-----KIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l-~-~~~-----~~~~~~~f~~E~~~l 151 (152)
...+.||+|+||.||+|.+.+. .+++|+. . ... .....+.|.+|+.+|
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l 390 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLL 390 (535)
T ss_pred CccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHH
Confidence 3467899999999999998544 3443332 1 111 111125677887665
No 324
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.00 E-value=0.028 Score=39.58 Aligned_cols=33 Identities=24% Similarity=0.531 Sum_probs=26.7
Q ss_pred ccCeecccCCceeeeEEc-CCCCEEEEEecCCcc
Q 042973 104 ESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD 136 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~ 136 (152)
.-+.||+|+||.+|.|.. .+|..||||.-+...
T Consensus 19 lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a 52 (341)
T KOG1163|consen 19 LVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA 52 (341)
T ss_pred EEEeecCCchhheeeeeeccCCceEEEEeecccC
Confidence 346799999999999964 789999999865443
No 325
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=94.99 E-value=0.014 Score=36.47 Aligned_cols=16 Identities=25% Similarity=0.295 Sum_probs=7.9
Q ss_pred eeeeehhhhHHHHHHH
Q 042973 53 ITTIVAVIGAVIFSVI 68 (152)
Q Consensus 53 ~~~ii~~~~~~~~~~~ 68 (152)
+.+|++++.+++++++
T Consensus 66 i~~Ii~gv~aGvIg~I 81 (122)
T PF01102_consen 66 IIGIIFGVMAGVIGII 81 (122)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred eeehhHHHHHHHHHHH
Confidence 3455555555554433
No 326
>smart00181 EGF Epidermal growth factor-like domain.
Probab=94.98 E-value=0.037 Score=26.12 Aligned_cols=25 Identities=52% Similarity=1.003 Sum_probs=20.8
Q ss_pred CCCCc-cceeCCCCceeeCCCCCcCC
Q 042973 19 YHCEG-KCKNTIGSCTCDCPIGMYGD 43 (152)
Q Consensus 19 ~~c~~-~C~~~~g~~~C~C~~g~~~~ 43 (152)
.+|.. .|.+..+.+.|.|+.|+.++
T Consensus 6 ~~C~~~~C~~~~~~~~C~C~~g~~g~ 31 (35)
T smart00181 6 GPCSNGTCINTPGSYTCSCPPGYTGD 31 (35)
T ss_pred CCCCCCEEECCCCCeEeECCCCCccC
Confidence 36733 89999999999999999873
No 327
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.86 E-value=0.04 Score=41.17 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=27.4
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCC
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKE 134 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~ 134 (152)
.+...+.||+|.||.|+.|.. ..+..||+|.++.
T Consensus 18 ~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~ 52 (370)
T KOG0583|consen 18 KYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDR 52 (370)
T ss_pred ceeeeeeecCCCCeeEEEeeeccCCCeEEEEEech
Confidence 455567899999999999965 4579999997644
No 328
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=94.65 E-value=0.07 Score=38.31 Aligned_cols=45 Identities=24% Similarity=0.349 Sum_probs=32.0
Q ss_pred CeecccCCceeeeEEcCC-CCEEEEEecCCcchhHHHHHHHHHHhh
Q 042973 106 HFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRINQEFQKEMGI 150 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~~~f~~E~~~ 150 (152)
..||.|..|.|++..+.+ |..+|||.++......+.+..+.++.+
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldv 143 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDV 143 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhH
Confidence 358999999999999855 788999999765543332444444443
No 329
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=94.59 E-value=0.024 Score=42.35 Aligned_cols=51 Identities=24% Similarity=0.388 Sum_probs=36.0
Q ss_pred hhhCCCccCeecccCCceeeeEEcCC----CCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVLPD----NTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~~~----~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..+.+...+.||+|.|+.||+++... ...||+|.+...+..+ -..+|++.|
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~---ri~~El~~L 88 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPS---RILNELEML 88 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCch---HHHHHHHHH
Confidence 33455667889999999999998733 5679999997655542 355555543
No 330
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=94.57 E-value=0.013 Score=47.36 Aligned_cols=32 Identities=34% Similarity=0.691 Sum_probs=25.6
Q ss_pred CCccCeecccCCce-eeeEEcCCCCEEEEEecCC
Q 042973 102 YDESHFLGEGGFGS-VYKGVLPDNTQIAVKKPKE 134 (152)
Q Consensus 102 ~~~~~~ig~g~~g~-Vy~g~~~~~~~vavK~l~~ 134 (152)
|+..+++|.|.-|+ ||+|.+ +|+.||||++-.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~ 543 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE 543 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhh
Confidence 44456788888877 799999 789999999844
No 331
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.49 E-value=0.027 Score=40.30 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=33.8
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
+.+++-||-|+||.||..+- ++|..||.|++...-. .+. +.|-+|+.+|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~-krvFre~kmL 106 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASC-KRVFREIKML 106 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHH-HHHHHHHHHH
Confidence 44567899999999998876 5688999999844221 122 4555565544
No 332
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=94.44 E-value=0.082 Score=35.52 Aligned_cols=42 Identities=24% Similarity=0.357 Sum_probs=32.2
Q ss_pred CeecccCCceeeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 106 HFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
..|++|.++.||.|.| .|..+|+|.-+..+.. ..+..|+++|
T Consensus 28 ~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~r---~~l~kEakiL 69 (201)
T COG2112 28 KELAKGTTSVVYLGEW-RGGEVALKVRRRDSPR---RNLEKEAKIL 69 (201)
T ss_pred hhhhcccccEEEEeec-cCceEEEEEecCCcch---hhHHHHHHHH
Confidence 4689999999999999 4568999887655443 5677777654
No 333
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=94.44 E-value=0.035 Score=38.19 Aligned_cols=46 Identities=24% Similarity=0.315 Sum_probs=33.1
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGI 150 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~ 150 (152)
...||+|++|.|-+-+. ++|+.+|||.++..-..++....+.|+.+
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi 97 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDI 97 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhh
Confidence 34589999999876654 67999999999654443333667777654
No 334
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.29 E-value=0.023 Score=47.20 Aligned_cols=34 Identities=32% Similarity=0.524 Sum_probs=28.4
Q ss_pred CCCccCeecccCCceeeeEEcCCCCEEEEEecCC
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKE 134 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~ 134 (152)
.|.....+|+|+||+||+|+-.+|..||+|.=+.
T Consensus 699 ~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P 732 (974)
T KOG1166|consen 699 KFCISKEIGEGSYGSVYVATHSNGKLVALKVEKP 732 (974)
T ss_pred eEEEEeeeccccceEEEEeecCCCcEEEEEeecC
Confidence 3444567999999999999998899999998654
No 335
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=94.27 E-value=0.015 Score=45.57 Aligned_cols=34 Identities=38% Similarity=0.613 Sum_probs=28.2
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEecCCcchhH
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIR 139 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~ 139 (152)
.+-||+|+-|.||.|.+ .++.||||+.++....+
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~elkETd 162 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVRELKETD 162 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHhhhhhhh
Confidence 45689999999999999 56899999997765443
No 336
>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []. This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.
Probab=93.97 E-value=0.069 Score=25.90 Aligned_cols=27 Identities=11% Similarity=0.388 Sum_probs=12.3
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHHHH
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCIER 80 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
..+++++.++++++++.++....++||
T Consensus 6 IaIIv~V~vg~~iiii~~~~YaCcykk 32 (38)
T PF02439_consen 6 IAIIVAVVVGMAIIIICMFYYACCYKK 32 (38)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 445555554444444444443344443
No 337
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=93.92 E-value=0.13 Score=37.41 Aligned_cols=43 Identities=21% Similarity=0.228 Sum_probs=30.6
Q ss_pred cccCCceeeeEEc-CCCCEEEEEecCCcchh-HHHHHHHHHHhhh
Q 042973 109 GEGGFGSVYKGVL-PDNTQIAVKKPKESDKI-RINQEFQKEMGIV 151 (152)
Q Consensus 109 g~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~-~~~~~f~~E~~~l 151 (152)
|.|+|++||.+.. ..+..||+|.++..... ...+.|.+|+.++
T Consensus 9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~ 53 (328)
T cd08226 9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLS 53 (328)
T ss_pred cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHH
Confidence 7889999999986 46899999998643322 2225677777554
No 338
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=93.89 E-value=0.032 Score=40.80 Aligned_cols=55 Identities=25% Similarity=0.286 Sum_probs=38.2
Q ss_pred hHHHHHHhhhCCCccCeecccCCceeeeEE-cCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 91 CAAKLVKATKNYDESHFLGEGGFGSVYKGV-LPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 91 ~~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~-~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
+++++-+-| .++||+|+|+.|-... +..|...|||++........ ....+|++++
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR-~RvfREVe~f 129 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSR-SRVFREVETF 129 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHH-HHHHHHHHHH
Confidence 345554444 4679999999998665 35688999999966543333 6677777764
No 339
>PHA03210 serine/threonine kinase US3; Provisional
Probab=93.82 E-value=0.029 Score=43.51 Aligned_cols=22 Identities=23% Similarity=0.443 Sum_probs=17.8
Q ss_pred hCCCccCeecccCCceeeeEEc
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL 121 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~ 121 (152)
..|...+.||+|+||+||++.+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~ 169 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICAL 169 (501)
T ss_pred hccEEEeEecCCCCcceEEEEE
Confidence 3455567899999999998875
No 340
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=93.79 E-value=0.0094 Score=48.18 Aligned_cols=32 Identities=25% Similarity=0.448 Sum_probs=26.7
Q ss_pred hhHHHHHHhhhCCCccCeecccCCceeeeEEcC
Q 042973 90 WCAAKLVKATKNYDESHFLGEGGFGSVYKGVLP 122 (152)
Q Consensus 90 ~~~~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~ 122 (152)
+..+||+...+ ....+.+|+|+||+||.|.-.
T Consensus 985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~n 1016 (1025)
T KOG4258|consen 985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNAN 1016 (1025)
T ss_pred CChhHHHHHHH-HhhhhhhccCccceEEEecCC
Confidence 55678888777 777889999999999999863
No 341
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=93.76 E-value=0.095 Score=36.60 Aligned_cols=36 Identities=11% Similarity=-0.173 Sum_probs=28.3
Q ss_pred hCCCccCeecccCCceeeeEEcCCCCEEEEEecCCcc
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESD 136 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~ 136 (152)
..+...+++|+|+||.||.... ++..+|+|.++...
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~ 66 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKV 66 (232)
T ss_pred CceEEEEEecCCCceEEEEEec-CCCcEEEEEechhc
Confidence 4455567899999999998665 56789999996543
No 342
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=93.61 E-value=0.14 Score=35.59 Aligned_cols=31 Identities=29% Similarity=0.287 Sum_probs=21.9
Q ss_pred CccCeecccCCceeeeEEcCC-CCEEEEEecC
Q 042973 103 DESHFLGEGGFGSVYKGVLPD-NTQIAVKKPK 133 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~ 133 (152)
...+.||+|+||.||++.... +..+++|.++
T Consensus 3 ~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~ 34 (260)
T cd08222 3 ILQQRLGKGSFGTVYLVKDKKAVAEERLKVLK 34 (260)
T ss_pred eeeeeecCCCCceEEEEEecCCCCcceEEEec
Confidence 345789999999999998633 3445555554
No 343
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=93.56 E-value=0.12 Score=39.69 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=29.2
Q ss_pred hhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCC
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKE 134 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~ 134 (152)
..+.|.....||+|.||.|-.+.- .++..+|||.|..
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K 132 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPK 132 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeech
Confidence 445566677899999999998874 4578999999944
No 344
>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]
Probab=93.52 E-value=0.15 Score=46.23 Aligned_cols=27 Identities=30% Similarity=0.739 Sum_probs=23.3
Q ss_pred CCCC--CccceeCCCCceeeCCCCCcCCC
Q 042973 18 KYHC--EGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 18 ~~~c--~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
..|| +++|.-..++|.|.|+.||.|..
T Consensus 3908 snPC~~GgtCip~~n~f~CnC~~gyTG~~ 3936 (4289)
T KOG1219|consen 3908 SNPCLTGGTCIPFYNGFLCNCPNGYTGKR 3936 (4289)
T ss_pred CCCCCCCCEEEecCCCeeEeCCCCccCce
Confidence 3578 88999999999999999998854
No 345
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=93.38 E-value=0.075 Score=38.79 Aligned_cols=35 Identities=34% Similarity=0.506 Sum_probs=26.2
Q ss_pred CCCccCeecccCCceeeeEEcCCC--CEEEEEecCCc
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPDN--TQIAVKKPKES 135 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~~--~~vavK~l~~~ 135 (152)
.+.....||+|+||.||.+.-... ..+|+|.-...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~ 55 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKE 55 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEec
Confidence 455677899999999999986443 36788776543
No 346
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=93.19 E-value=0.13 Score=32.56 Aligned_cols=14 Identities=14% Similarity=-0.005 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHh
Q 042973 68 IVGILIFIGCIERR 81 (152)
Q Consensus 68 ~~~~~~~~~~~~~~ 81 (152)
+++++++-.+|+|+
T Consensus 16 ~~~~~~~~rRR~r~ 29 (130)
T PF12273_consen 16 LFLFYCHNRRRRRR 29 (130)
T ss_pred HHHHHHHHHHHhhc
Confidence 33344444556666
No 347
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=93.08 E-value=0.15 Score=37.62 Aligned_cols=33 Identities=33% Similarity=0.615 Sum_probs=26.5
Q ss_pred CCCccCeecccCCceeeeEE-cCCCCEEEEEecC
Q 042973 101 NYDESHFLGEGGFGSVYKGV-LPDNTQIAVKKPK 133 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~-~~~~~~vavK~l~ 133 (152)
+|.-...||+|.||..+.|+ +-++++||||.-.
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEP 62 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEP 62 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecc
Confidence 34446789999999999996 4578999999763
No 348
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=93.05 E-value=0.2 Score=36.40 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=29.3
Q ss_pred cccCCceeeeEEc-CCCCEEEEEecCCcch-hHHHHHHHHHHhhh
Q 042973 109 GEGGFGSVYKGVL-PDNTQIAVKKPKESDK-IRINQEFQKEMGIV 151 (152)
Q Consensus 109 g~g~~g~Vy~g~~-~~~~~vavK~l~~~~~-~~~~~~f~~E~~~l 151 (152)
|.++|++||++.. ++|..||+|+++.... ......+.+|+.++
T Consensus 9 G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l 53 (327)
T cd08227 9 GFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVS 53 (327)
T ss_pred cccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHH
Confidence 5558899999987 5688999999965432 22224566676654
No 349
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.03 E-value=0.12 Score=40.21 Aligned_cols=50 Identities=18% Similarity=0.372 Sum_probs=36.2
Q ss_pred CCccCeecccCCceeeeEE-cCCCCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 102 YDESHFLGEGGFGSVYKGV-LPDNTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~-~~~~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
|..-..||+|+-|.||.+. ...+..||||++........ +-..+|+.+|+
T Consensus 275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~k-eLilnEi~Vm~ 325 (550)
T KOG0578|consen 275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKK-ELLLNEILVMR 325 (550)
T ss_pred hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCch-hhhHHHHHHHH
Confidence 3444579999999999885 35678899999965443333 66778887763
No 350
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.90 E-value=0.14 Score=41.54 Aligned_cols=42 Identities=33% Similarity=0.587 Sum_probs=29.9
Q ss_pred eecccCCceeeeEEcCC-CCEEEEEecCCcchhHHHHHHHHHHh
Q 042973 107 FLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRINQEFQKEMG 149 (152)
Q Consensus 107 ~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~~~f~~E~~ 149 (152)
++|+|.||+||.|+-.+ ...+|||.+...++... +-...|+.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~-QPLhEEIa 624 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREV-QPLHEEIA 624 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhh-ccHHHHHH
Confidence 68999999999998533 45789999976655443 33444443
No 351
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=92.79 E-value=0.15 Score=31.87 Aligned_cols=31 Identities=35% Similarity=0.496 Sum_probs=14.7
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCIERRKQK 84 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
..|+..++.+++.+++++++++++.+|++++
T Consensus 64 ~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 64 PAIIGIIFGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred cceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4443333334445555666665555555444
No 352
>PF07204 Orthoreo_P10: Orthoreovirus membrane fusion protein p10; InterPro: IPR009854 This family consists of several Orthoreovirus membrane fusion protein p10 sequences. p10 is thought to be a multifunctional protein that plays a key role in virus-host interaction [].
Probab=92.78 E-value=0.23 Score=29.22 Aligned_cols=69 Identities=16% Similarity=0.215 Sum_probs=28.6
Q ss_pred CCceeeCCCCCcCCCCCccCCcceeeeehhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHhhhHHHHHHhh
Q 042973 30 GSCTCDCPIGMYGDGKVDCRGFHITTIVAVIGAVIFSVIVGILIFIGCIERRKQKNFLKKWCAAKLVKAT 99 (152)
Q Consensus 30 g~~~C~C~~g~~~~~~~~c~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 99 (152)
|+.+|+-.....+.+..-+......+-.++.+.+++++++++.+++.++.|++ ....+.....|+..-+
T Consensus 17 g~vhcqa~~nsaGgdL~atS~~~ayWpyLA~GGG~iLilIii~Lv~CC~~K~K-~~~~r~~~~reLval~ 85 (98)
T PF07204_consen 17 GNVHCQASQNSAGGDLQATSSFVAYWPYLAAGGGLILILIIIALVCCCRAKHK-TSAARNTFHRELVALT 85 (98)
T ss_pred cchheeccccCCCCCeEEeehHHhhhHHhhccchhhhHHHHHHHHHHhhhhhh-hHhhhhHHHHHHHHHh
Confidence 55667655444444422222111122233333444444444444444444332 2223334445555433
No 353
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=92.76 E-value=0.19 Score=39.52 Aligned_cols=52 Identities=21% Similarity=0.261 Sum_probs=37.9
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHH-HHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRI-NQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~-~~~f~~E~~~l 151 (152)
..+.....||+|.|+.|..+.. ..+..||+|.++....+.. .+.+.+|+.+|
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~im 109 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIM 109 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHH
Confidence 3445566799999999999976 3488999999966544332 14588888776
No 354
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=92.40 E-value=0.13 Score=42.11 Aligned_cols=47 Identities=21% Similarity=0.391 Sum_probs=34.7
Q ss_pred HHHHHhhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhH
Q 042973 93 AKLVKATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIR 139 (152)
Q Consensus 93 ~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~ 139 (152)
+.+.-.++.|...++||.|.+|.||++.- .+++..|+|++......+
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d 59 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE 59 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc
Confidence 33444555666677899999999999974 568889999986655544
No 355
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=92.25 E-value=0.076 Score=41.49 Aligned_cols=46 Identities=24% Similarity=0.416 Sum_probs=35.9
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEecCC--cchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKKPKE--SDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~--~~~~~~~~~f~~E~~~l 151 (152)
...||.|+...||+....+.+.+|+|+... .+.... +.|.+|+.+|
T Consensus 366 lk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl-~gy~nEI~lL 413 (677)
T KOG0596|consen 366 LKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTL-DGYRNEIALL 413 (677)
T ss_pred HHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHH-HHHHHHHHHH
Confidence 345899999999999988888899988743 233333 8899999876
No 356
>PF12191 stn_TNFRSF12A: Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain; InterPro: IPR022316 The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern []. The cysteines allow formation of an extended rod-like structure, responsible for ligand binding []. Upon receptor activation, different intracellular signalling complexes are assembled for different members of the TNFR superfamily, depending on their intracellular domains and sequences []. Activation of TNFRs can therefore induce a range of disparate effects, including cell proliferation, differentiation, survival, or apoptotic cell death, depending upon the receptor involved []. TNFRs are widely distributed and play important roles in many crucial biological processes, such as lymphoid and neuronal development, innate and adaptive immunity, and maintenance of cellular homeostasis []. Drugs that manipulate their signalling have potential roles in the prevention and treatment of many diseases, such as viral infections, coronary heart disease, transplant rejection, and immune disease []. TNF receptor 12 (also known as TWEAK receptor, and fibroblast growth factor-inducible-14 (Fn14)) has been implicated in endothelial cell growth and migration []. The receptor may also play a role in cell-matrix interactions [].; PDB: 2KN0_A 2RPJ_A 2KMZ_A 2EQP_A.
Probab=92.24 E-value=0.055 Score=33.62 Aligned_cols=13 Identities=15% Similarity=-0.123 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHh
Q 042973 69 VGILIFIGCIERR 81 (152)
Q Consensus 69 ~~~~~~~~~~~~~ 81 (152)
++..++++++.|+
T Consensus 94 llsg~lv~rrcrr 106 (129)
T PF12191_consen 94 LLSGFLVWRRCRR 106 (129)
T ss_dssp -------------
T ss_pred HHHHHHHHhhhhc
Confidence 3333333333333
No 357
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]. Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.
Probab=92.22 E-value=0.03 Score=30.55 Aligned_cols=27 Identities=19% Similarity=0.167 Sum_probs=0.4
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHHHH
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCIER 80 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
+.++.+.++++++.+++++++++++++
T Consensus 12 aavIaG~Vvgll~ailLIlf~iyR~rk 38 (64)
T PF01034_consen 12 AAVIAGGVVGLLFAILLILFLIYRMRK 38 (64)
T ss_dssp -------------------------S-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444555555454444444444444433
No 358
>PF15102 TMEM154: TMEM154 protein family
Probab=92.05 E-value=0.066 Score=34.32 Aligned_cols=7 Identities=14% Similarity=0.197 Sum_probs=2.8
Q ss_pred eeeehhh
Q 042973 54 TTIVAVI 60 (152)
Q Consensus 54 ~~ii~~~ 60 (152)
+.|++..
T Consensus 59 LmIlIP~ 65 (146)
T PF15102_consen 59 LMILIPL 65 (146)
T ss_pred EEEeHHH
Confidence 3344443
No 359
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins
Probab=91.96 E-value=0.27 Score=22.99 Aligned_cols=21 Identities=29% Similarity=0.697 Sum_probs=16.5
Q ss_pred CccceeCCCCceeeCCCCCcCCC
Q 042973 22 EGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 22 ~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
+|+|... ...|.|.+||.+..
T Consensus 11 ~G~C~~~--~g~C~C~~g~~G~~ 31 (32)
T PF07974_consen 11 HGTCVSP--CGRCVCDSGYTGPD 31 (32)
T ss_pred CCEEeCC--CCEEECCCCCcCCC
Confidence 7788866 34899999998864
No 360
>PHA03207 serine/threonine kinase US3; Provisional
Probab=91.92 E-value=0.3 Score=36.55 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=25.7
Q ss_pred CCccCeecccCCceeeeEEcC---CCCEEEEEecCC
Q 042973 102 YDESHFLGEGGFGSVYKGVLP---DNTQIAVKKPKE 134 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~---~~~~vavK~l~~ 134 (152)
|.....||+|+||.||++... .+..||+|.+..
T Consensus 94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~ 129 (392)
T PHA03207 94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG 129 (392)
T ss_pred eEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccc
Confidence 445677999999999998753 246799998854
No 361
>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A ....
Probab=91.52 E-value=0.063 Score=30.57 Aligned_cols=14 Identities=7% Similarity=0.109 Sum_probs=6.6
Q ss_pred hhhHHHHHHhhhCC
Q 042973 89 KWCAAKLVKATKNY 102 (152)
Q Consensus 89 ~~~~~~l~~~~~~~ 102 (152)
+.+|+|-..+...|
T Consensus 56 P~TYEDP~qAV~eF 69 (75)
T PF14575_consen 56 PHTYEDPNQAVREF 69 (75)
T ss_dssp GGGSSSHHHHHHHC
T ss_pred cccccCHHHHHHHH
Confidence 34455544444444
No 362
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=91.37 E-value=0.34 Score=34.77 Aligned_cols=44 Identities=23% Similarity=0.116 Sum_probs=31.2
Q ss_pred CeecccCCceeeeEEcCCCCEEEEEecCCc--chhHHHHHHHHHHhhh
Q 042973 106 HFLGEGGFGSVYKGVLPDNTQIAVKKPKES--DKIRINQEFQKEMGIV 151 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~--~~~~~~~~f~~E~~~l 151 (152)
+.+|.|+++.||++.. ++..||+|+++.. +.... ..+.+|+.+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~-~~~~~Ei~~l 53 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDL-KLLQQEIITS 53 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHH-HHHHHHHHHH
Confidence 3456777777888876 7899999998643 22233 6788888765
No 363
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=91.36 E-value=0.17 Score=35.75 Aligned_cols=47 Identities=32% Similarity=0.365 Sum_probs=33.8
Q ss_pred CCccCeecccCCceeeeEE-cCCCCEEEEEecCCcchhHHHHHHHHHHh
Q 042973 102 YDESHFLGEGGFGSVYKGV-LPDNTQIAVKKPKESDKIRINQEFQKEMG 149 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~-~~~~~~vavK~l~~~~~~~~~~~f~~E~~ 149 (152)
|...+.+|+|+|..||.+. +.++...|+|++.-.+..+. +.-++|++
T Consensus 23 yri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~-e~~~rEid 70 (302)
T KOG2345|consen 23 YRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDI-EEALREID 70 (302)
T ss_pred EEEeeeecCCCceeeeeecccCcccchhhheeeccchHHH-HHHHHHHH
Confidence 4445689999999999876 45688999999965544433 55566654
No 364
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=91.35 E-value=0.073 Score=26.25 Aligned_cols=18 Identities=11% Similarity=0.117 Sum_probs=7.6
Q ss_pred eeeehhhhHHHHHHHHHH
Q 042973 54 TTIVAVIGAVIFSVIVGI 71 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~ 71 (152)
..|..++.+.+.++++++
T Consensus 11 vaIa~~VvVPV~vI~~vl 28 (40)
T PF08693_consen 11 VAIAVGVVVPVGVIIIVL 28 (40)
T ss_pred EEEEEEEEechHHHHHHH
Confidence 334444444444443333
No 365
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=91.31 E-value=0.062 Score=45.21 Aligned_cols=59 Identities=19% Similarity=0.233 Sum_probs=40.6
Q ss_pred HHHHHhhhCCCccCeecccCCceeeeEEcCC-CCEEEEEecCCcch--hHHHHHHHHHHhhh
Q 042973 93 AKLVKATKNYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDK--IRINQEFQKEMGIV 151 (152)
Q Consensus 93 ~~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~--~~~~~~f~~E~~~l 151 (152)
.+++...++|..-.+||+|+||.|......+ +...|.|+|..+.- .....-|..|=.+|
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDim 129 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIM 129 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHH
Confidence 4555566777777899999999999888744 66789999965322 11114466665554
No 366
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=91.25 E-value=0.11 Score=40.44 Aligned_cols=36 Identities=19% Similarity=0.358 Sum_probs=29.3
Q ss_pred hhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecC
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPK 133 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~ 133 (152)
...+|...++||+|+|.+|++++- ..+..+|||+|.
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~ 107 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLD 107 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhh
Confidence 345566688999999999999975 447889999994
No 367
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=90.86 E-value=0.072 Score=40.73 Aligned_cols=44 Identities=30% Similarity=0.452 Sum_probs=31.2
Q ss_pred hhHHHHHHhh-hCCCccCeecccCCceeeeEEcCC-CCEEEEEecC
Q 042973 90 WCAAKLVKAT-KNYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPK 133 (152)
Q Consensus 90 ~~~~~l~~~~-~~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~ 133 (152)
|.+-|++..+ +.|..-++||+|+||+||-....+ |.-.|.|+|.
T Consensus 174 WK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~ 219 (591)
T KOG0986|consen 174 WKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLD 219 (591)
T ss_pred HHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHH
Confidence 3344444444 346667899999999999887644 6678888883
No 368
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=90.85 E-value=0.78 Score=32.21 Aligned_cols=28 Identities=29% Similarity=0.256 Sum_probs=22.8
Q ss_pred ecccCCceeeeEEc-CCCCEEEEEecCCc
Q 042973 108 LGEGGFGSVYKGVL-PDNTQIAVKKPKES 135 (152)
Q Consensus 108 ig~g~~g~Vy~g~~-~~~~~vavK~l~~~ 135 (152)
+|+|.||.||++.- .++..+|+|.++..
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~ 52 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAK 52 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehh
Confidence 59999999999986 45778999988543
No 369
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=90.77 E-value=0.3 Score=38.23 Aligned_cols=42 Identities=21% Similarity=0.360 Sum_probs=28.8
Q ss_pred ecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 108 LGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 108 ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.|+|-|++|.++.- ..|+.||||+++.+..-. +.=+.|+++|
T Consensus 440 ~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~--KtGl~EleiL 482 (752)
T KOG0670|consen 440 TGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH--KTGLKELEIL 482 (752)
T ss_pred cccceeeeeeeccccCCCCeeEEEEeecchHHh--hhhhHHHHHH
Confidence 58999999999975 237799999997643322 3344555544
No 370
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=90.70 E-value=0.13 Score=37.68 Aligned_cols=31 Identities=35% Similarity=0.545 Sum_probs=23.4
Q ss_pred cCeecccCCceeeeEEcCC-----CCEEEEEecCCc
Q 042973 105 SHFLGEGGFGSVYKGVLPD-----NTQIAVKKPKES 135 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~-----~~~vavK~l~~~ 135 (152)
...||+|.||.|||+.-.+ ....|+|+++..
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~ 64 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGE 64 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhcc
Confidence 4568999999999996422 126899999654
No 371
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=90.46 E-value=0.2 Score=36.03 Aligned_cols=46 Identities=26% Similarity=0.458 Sum_probs=33.8
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHH
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEM 148 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~ 148 (152)
.|.....+|+|.||.+....- +..+.+++|-....-... .+|.+|.
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~--~dF~rEf 71 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQ--ADFVREF 71 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhH--HHHHHHh
Confidence 344456799999999998876 446789999886544433 7888875
No 372
>PHA02887 EGF-like protein; Provisional
Probab=90.42 E-value=0.24 Score=30.45 Aligned_cols=25 Identities=36% Similarity=0.736 Sum_probs=20.1
Q ss_pred CC-CccceeCC--CCceeeCCCCCcCCC
Q 042973 20 HC-EGKCKNTI--GSCTCDCPIGMYGDG 44 (152)
Q Consensus 20 ~c-~~~C~~~~--g~~~C~C~~g~~~~~ 44 (152)
-| +|+|.... ....|.|+.||.|..
T Consensus 93 YCiHG~C~yI~dL~epsCrC~~GYtG~R 120 (126)
T PHA02887 93 FCINGECMNIIDLDEKFCICNKGYTGIR 120 (126)
T ss_pred EeeCCEEEccccCCCceeECCCCcccCC
Confidence 36 88998754 567899999999876
No 373
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=90.41 E-value=0.016 Score=40.94 Aligned_cols=47 Identities=28% Similarity=0.427 Sum_probs=29.3
Q ss_pred cCeecccCCceeeeEEcCC-CCEEEEEecC-CcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVLPD-NTQIAVKKPK-ESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~-~~~~~~~~~~f~~E~~~l 151 (152)
...+|+|.||+||+++-.+ |..||+|+.- ++.+..-..+-++|+.+|
T Consensus 22 ~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL 70 (376)
T KOG0669|consen 22 LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKIL 70 (376)
T ss_pred HHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHH
Confidence 3568999999999998755 5568887652 222222113445555443
No 374
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=90.18 E-value=0.059 Score=34.77 Aligned_cols=15 Identities=20% Similarity=0.306 Sum_probs=7.8
Q ss_pred eeeeehhhhHHHHHH
Q 042973 53 ITTIVAVIGAVIFSV 67 (152)
Q Consensus 53 ~~~ii~~~~~~~~~~ 67 (152)
++++++|++++++++
T Consensus 51 VIGvVVGVGg~ill~ 65 (154)
T PF04478_consen 51 VIGVVVGVGGPILLG 65 (154)
T ss_pred EEEEEecccHHHHHH
Confidence 355566655554443
No 375
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=90.09 E-value=0.41 Score=34.76 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=26.9
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCCc
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES 135 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~ 135 (152)
+|.....||.|+||.|...+. .+|.-.|+|+|+..
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~ 80 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ 80 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHH
Confidence 344456899999999998876 34778899999653
No 376
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=90.01 E-value=0.15 Score=18.76 Aligned_cols=12 Identities=50% Similarity=1.149 Sum_probs=8.6
Q ss_pred eeeCCCCCcCCC
Q 042973 33 TCDCPIGMYGDG 44 (152)
Q Consensus 33 ~C~C~~g~~~~~ 44 (152)
.|.|++||.|..
T Consensus 1 ~C~C~~G~~G~~ 12 (13)
T PF12661_consen 1 TCQCPPGWTGPN 12 (13)
T ss_dssp EEEE-TTEETTT
T ss_pred CccCcCCCcCCC
Confidence 488999998864
No 377
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=89.73 E-value=0.12 Score=36.21 Aligned_cols=43 Identities=23% Similarity=0.551 Sum_probs=33.1
Q ss_pred cCeecccCCceeeeEE-cCCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGV-LPDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~-~~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
-+.+|+|.+++||.|. +.+.+.+.||.|+.-.. +...+|+.+|
T Consensus 43 vrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk----kKIkREikIL 86 (338)
T KOG0668|consen 43 VRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK----KKIKREIKIL 86 (338)
T ss_pred HHHHcCccHhhHhcccccCCCceEEEeeechHHH----HHHHHHHHHH
Confidence 4568999999999997 35678899999977554 5566676654
No 378
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=89.41 E-value=0.35 Score=36.81 Aligned_cols=50 Identities=20% Similarity=0.225 Sum_probs=32.9
Q ss_pred CccCeecccCCceeeeEEc-CCCCEEEEEecCCcchhH-HHHHHHHHHhhhC
Q 042973 103 DESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIR-INQEFQKEMGIVL 152 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~-~~~~f~~E~~~ls 152 (152)
...+.+|+|+||.++.-.- .+...+++|++.-..... .++.-.+|+.+||
T Consensus 7 e~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis 58 (426)
T KOG0589|consen 7 EVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLS 58 (426)
T ss_pred hhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHH
Confidence 3356799999999874432 246689999885433222 2257788887765
No 379
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=88.74 E-value=0.77 Score=36.13 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=27.4
Q ss_pred CeecccCCceeeeEEcCCCCEEEEEecCCcc
Q 042973 106 HFLGEGGFGSVYKGVLPDNTQIAVKKPKESD 136 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~ 136 (152)
.-|+.-+.|.||++++++|+.||||.-+..-
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l 197 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGL 197 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcCh
Confidence 4689999999999999999999999987643
No 380
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=88.63 E-value=0.22 Score=37.13 Aligned_cols=43 Identities=33% Similarity=0.408 Sum_probs=30.1
Q ss_pred cCeecccCCceeeeEEcC-CCCEEEEEecCCcchhHHHHHHHHHHh
Q 042973 105 SHFLGEGGFGSVYKGVLP-DNTQIAVKKPKESDKIRINQEFQKEMG 149 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~-~~~~vavK~l~~~~~~~~~~~f~~E~~ 149 (152)
-..+|+|.||.|.+..-. .+..||+|+++...... +.-+.|+.
T Consensus 94 ~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYr--eAa~iEi~ 137 (415)
T KOG0671|consen 94 VDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYR--EAALIEIE 137 (415)
T ss_pred hhhhcCCcccceEEEeecCCCceehHHHHHHHHHHh--hHHHHHHH
Confidence 456899999999987542 26789999998766544 33344443
No 381
>PTZ00046 rifin; Provisional
Probab=88.57 E-value=0.34 Score=35.84 Aligned_cols=13 Identities=23% Similarity=0.281 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHHh
Q 042973 69 VGILIFIGCIERR 81 (152)
Q Consensus 69 ~~~~~~~~~~~~~ 81 (152)
++++.+++|+||+
T Consensus 331 MvIIYLILRYRRK 343 (358)
T PTZ00046 331 MVIIYLILRYRRK 343 (358)
T ss_pred HHHHHHHHHhhhc
Confidence 3344444444444
No 382
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=88.40 E-value=0.37 Score=35.61 Aligned_cols=12 Identities=25% Similarity=0.260 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHh
Q 042973 70 GILIFIGCIERR 81 (152)
Q Consensus 70 ~~~~~~~~~~~~ 81 (152)
+++.+++|+||+
T Consensus 327 vIIYLILRYRRK 338 (353)
T TIGR01477 327 VIIYLILRYRRK 338 (353)
T ss_pred HHHHHHHHhhhc
Confidence 334444444444
No 383
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=88.11 E-value=0.48 Score=34.41 Aligned_cols=12 Identities=25% Similarity=0.229 Sum_probs=4.8
Q ss_pred HHHHHHHHHHHH
Q 042973 69 VGILIFIGCIER 80 (152)
Q Consensus 69 ~~~~~~~~~~~~ 80 (152)
++++.+++++||
T Consensus 272 MvIIYLILRYRR 283 (299)
T PF02009_consen 272 MVIIYLILRYRR 283 (299)
T ss_pred HHHHHHHHHHHH
Confidence 333333444444
No 384
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.75 E-value=0.81 Score=35.51 Aligned_cols=45 Identities=20% Similarity=0.284 Sum_probs=33.7
Q ss_pred cCeecccCCceeeeEEc-CCCCEEEEEecCCcchhHHHHHHHHHHhhh
Q 042973 105 SHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~~~~~~f~~E~~~l 151 (152)
.+.||=|.|.+||.+.- .+.+-||+|+.+...... +.-+.|+++|
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYt--EaAlDEIklL 128 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYT--EAALDEIKLL 128 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhHHH--HHHHHHHHHH
Confidence 46789999999998863 456789999987654433 5667777776
No 385
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=87.35 E-value=1.4 Score=32.11 Aligned_cols=23 Identities=30% Similarity=0.398 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Q 042973 62 AVIFSVIVGILIFIGCIERRKQK 84 (152)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
+++++++++++++++...|.+++
T Consensus 262 iiaIliIVLIMvIIYLILRYRRK 284 (299)
T PF02009_consen 262 IIAILIIVLIMVIIYLILRYRRK 284 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555566666676664
No 386
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=86.52 E-value=0.6 Score=35.35 Aligned_cols=31 Identities=32% Similarity=0.389 Sum_probs=25.3
Q ss_pred CeecccCCceeeeEEcCC-CCEEEEEecCCcc
Q 042973 106 HFLGEGGFGSVYKGVLPD-NTQIAVKKPKESD 136 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~ 136 (152)
..||.|..|+||..++.+ +...|+|.+....
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~ 114 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKES 114 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHH
Confidence 468999999999999955 3688999996543
No 387
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=86.33 E-value=0.15 Score=39.18 Aligned_cols=27 Identities=44% Similarity=0.757 Sum_probs=21.4
Q ss_pred CeecccCCceeeeEEc-CCCCEEEEEec
Q 042973 106 HFLGEGGFGSVYKGVL-PDNTQIAVKKP 132 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~-~~~~~vavK~l 132 (152)
++||+|+|.+|||+.- ...+-||||+-
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIH 496 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIH 496 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeee
Confidence 5689999999999963 34567888875
No 388
>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=85.05 E-value=0.77 Score=37.85 Aligned_cols=41 Identities=29% Similarity=0.598 Sum_probs=31.3
Q ss_pred CcccccccCCCCCCC--CccceeCCCCceeeCCCCCcCCC-CCcc
Q 042973 7 VTDIDECLDKEKYHC--EGKCKNTIGSCTCDCPIGMYGDG-KVDC 48 (152)
Q Consensus 7 C~~~~~C~~~~~~~c--~~~C~~~~g~~~C~C~~g~~~~~-~~~c 48 (152)
|.|.++|.... .-| +..|.|-++++.|.|..|+.-.+ ...|
T Consensus 731 c~d~~eca~~~-~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tC 774 (1289)
T KOG1214|consen 731 CVDENECATGF-HRCGPNSVCINLPGSYRCECRSGYEFADDRHTC 774 (1289)
T ss_pred CCChhhhccCC-CCCCCCceeecCCCceeEEEeecceeccCCcce
Confidence 99999997532 346 88999999999999988875544 3444
No 389
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=84.89 E-value=0.34 Score=38.33 Aligned_cols=47 Identities=21% Similarity=0.420 Sum_probs=30.5
Q ss_pred cCeecccCCceeeeEEcC-CCCEEEEE--ecCCc--chhHHHHHHHHHHhhhC
Q 042973 105 SHFLGEGGFGSVYKGVLP-DNTQIAVK--KPKES--DKIRINQEFQKEMGIVL 152 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~-~~~~vavK--~l~~~--~~~~~~~~f~~E~~~ls 152 (152)
..+||+|+|-+||||.-. .|..||=- +++.. +..+. +.|..|+.+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~l-eR~~~Ev~lLK 96 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEEL-ERLYSEVHLLK 96 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHH-HHHHHHHHHHc
Confidence 568999999999999752 25566522 22211 12222 77999998873
No 390
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=84.73 E-value=0.17 Score=40.53 Aligned_cols=39 Identities=28% Similarity=0.383 Sum_probs=29.3
Q ss_pred hhhCCCccCeecccCCceeeeEEc-CCCCEEEEEecCCcc
Q 042973 98 ATKNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESD 136 (152)
Q Consensus 98 ~~~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~ 136 (152)
+.+.|.....+|.|.+|.|||++- ..+...|+|.++...
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep 52 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP 52 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccC
Confidence 334555566799999999999975 457888999886543
No 391
>PF12877 DUF3827: Domain of unknown function (DUF3827); InterPro: IPR024606 The function of the proteins in this entry is not currently known, but one of the human proteins (Q9HCM3 from SWISSPROT) has been implicated in pilocytic astrocytomas [, , ]. In the majority of cases of pilocytic astrocytomas a tandem duplication produces an in-frame fusion of the gene encoding this protein and the BRAF oncogene. The resulting fusion protein has constitutive BRAF kinase activity and is capable of transforming cells.
Probab=84.26 E-value=1.3 Score=35.28 Aligned_cols=28 Identities=21% Similarity=0.222 Sum_probs=15.9
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHHHHh
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCIERR 81 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
+||++++++.+++++++++++++...|+
T Consensus 269 lWII~gVlvPv~vV~~Iiiil~~~LCRk 296 (684)
T PF12877_consen 269 LWIIAGVLVPVLVVLLIIIILYWKLCRK 296 (684)
T ss_pred eEEEehHhHHHHHHHHHHHHHHHHHhcc
Confidence 6677777666665555555544444433
No 392
>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms]
Probab=84.23 E-value=0.75 Score=40.24 Aligned_cols=33 Identities=36% Similarity=0.957 Sum_probs=26.9
Q ss_pred ccccccCCCCCCC--CccceeCCCCceeeCCCCCcCCC
Q 042973 9 DIDECLDKEKYHC--EGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 9 ~~~~C~~~~~~~c--~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
.+|.|-+ .|| ++.|....|+|+|.|.+||.|..
T Consensus 1238 eiDlCYs---~pC~nng~C~srEggYtCeCrpg~tGeh 1272 (2531)
T KOG4289|consen 1238 EIDLCYS---GPCGNNGRCRSREGGYTCECRPGFTGEH 1272 (2531)
T ss_pred hhHhhhc---CCCCCCCceEEecCceeEEecCCccccc
Confidence 4566643 367 89999999999999999999865
No 393
>PF10873 DUF2668: Protein of unknown function (DUF2668); InterPro: IPR022640 Members in this family of proteins are annotated as cysteine and tyrosine-rich protein 1, however currently no function is known [].
Probab=83.93 E-value=2 Score=27.60 Aligned_cols=28 Identities=21% Similarity=0.106 Sum_probs=12.3
Q ss_pred ceeeeehhhhHHHHHHHHHHHHHHHHHH
Q 042973 52 HITTIVAVIGAVIFSVIVGILIFIGCIE 79 (152)
Q Consensus 52 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 79 (152)
.+++|+++++.++.++..+++-+.++++
T Consensus 62 AIaGIVfgiVfimgvva~i~icvCmc~k 89 (155)
T PF10873_consen 62 AIAGIVFGIVFIMGVVAGIAICVCMCMK 89 (155)
T ss_pred eeeeeehhhHHHHHHHHHHHHHHhhhhh
Confidence 3445555554444444433343444443
No 394
>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains. They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].
Probab=83.00 E-value=1.2 Score=30.59 Aligned_cols=12 Identities=33% Similarity=0.290 Sum_probs=4.9
Q ss_pred eeeehhhhHHHH
Q 042973 54 TTIVAVIGAVIF 65 (152)
Q Consensus 54 ~~ii~~~~~~~~ 65 (152)
..|+++++++++
T Consensus 37 ~~I~iaiVAG~~ 48 (221)
T PF08374_consen 37 VKIMIAIVAGIM 48 (221)
T ss_pred eeeeeeeecchh
Confidence 334444444333
No 395
>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5.5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.
Probab=82.07 E-value=0.43 Score=34.46 Aligned_cols=25 Identities=20% Similarity=0.339 Sum_probs=0.0
Q ss_pred ehhhhHHHHHHHHHHHHHHHHHHHh
Q 042973 57 VAVIGAVIFSVIVGILIFIGCIERR 81 (152)
Q Consensus 57 i~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
+.+++++++++++++++.+.++|||
T Consensus 150 IpaVVI~~iLLIA~iIa~icyrrkR 174 (290)
T PF05454_consen 150 IPAVVIAAILLIAGIIACICYRRKR 174 (290)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 3334444444444444444444444
No 396
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.84 E-value=0.65 Score=35.48 Aligned_cols=30 Identities=30% Similarity=0.389 Sum_probs=23.4
Q ss_pred cCeecccCCceeeeEEcCC-CCEEEEEecCC
Q 042973 105 SHFLGEGGFGSVYKGVLPD-NTQIAVKKPKE 134 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~ 134 (152)
-.+||+|+||.|..+.-.. .+..|||+|+.
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkK 384 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKK 384 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhcc
Confidence 3479999999999887532 45789999964
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=81.67 E-value=1.5 Score=35.02 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=25.3
Q ss_pred CCccCeecccCCceeeeEEcCC-CCEEEEEecCC
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKE 134 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~ 134 (152)
|+....+|+|+||.|+.+.... .-.|.||.+..
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~K 596 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFK 596 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhh
Confidence 4445579999999999998844 44788998844
No 398
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.06 E-value=0.64 Score=34.41 Aligned_cols=34 Identities=29% Similarity=0.381 Sum_probs=26.1
Q ss_pred CCCccCeecccCCceeeeEEc-CCCCEEEEEecCC
Q 042973 101 NYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKE 134 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~ 134 (152)
+|....+||+|.||.|....= ..+...|+|+|+.
T Consensus 169 dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkK 203 (516)
T KOG0690|consen 169 DFDFLKVLGKGTFGKVILCREKATGKLYAIKILKK 203 (516)
T ss_pred hhhHHHHhcCCccceEEEEeecccCceeehhhhhh
Confidence 455567899999999986543 3477899999965
No 399
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=81.00 E-value=3 Score=23.72 Aligned_cols=22 Identities=14% Similarity=0.220 Sum_probs=11.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhh
Q 042973 61 GAVIFSVIVGILIFIGCIERRK 82 (152)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
.+++++++++.+|+++.|+.+.
T Consensus 9 plivf~ifVap~WL~lHY~sk~ 30 (75)
T PF06667_consen 9 PLIVFMIFVAPIWLILHYRSKW 30 (75)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3344445555666666665543
No 400
>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms]
Probab=80.92 E-value=1.6 Score=38.38 Aligned_cols=36 Identities=33% Similarity=0.841 Sum_probs=27.3
Q ss_pred CCc-ccccccCCCCCCC--CccceeCCCCceeeCCCCCcCCC
Q 042973 6 RVT-DIDECLDKEKYHC--EGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 6 ~C~-~~~~C~~~~~~~c--~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
||+ --+.|.. .+| +++|.|..|.+.|.||.|+.+.+
T Consensus 1496 GC~ark~fCds---g~C~n~g~CvnrWg~~~C~CP~~fggk~ 1534 (2531)
T KOG4289|consen 1496 GCKARKNFCDS---GQCSNGGTCVNRWGGFSCECPLGFGGKG 1534 (2531)
T ss_pred CchhhhcccCC---CccCCCCeeecccCcEeecCccccCCcc
Confidence 354 2345543 356 78999999999999999998866
No 401
>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet. Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane
Probab=80.69 E-value=1.6 Score=20.60 Aligned_cols=24 Identities=29% Similarity=0.635 Sum_probs=15.5
Q ss_pred CCccceeCCCCceeeCCCCCcCCCC
Q 042973 21 CEGKCKNTIGSCTCDCPIGMYGDGK 45 (152)
Q Consensus 21 c~~~C~~~~g~~~C~C~~g~~~~~~ 45 (152)
|-..|..... ..|.|+.||..+.+
T Consensus 8 CpA~CDpn~~-~~C~CPeGyIlde~ 31 (34)
T PF09064_consen 8 CPADCDPNSP-GQCFCPEGYILDEG 31 (34)
T ss_pred CCCccCCCCC-CceeCCCceEecCC
Confidence 3345543322 38999999988763
No 402
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=79.89 E-value=0.77 Score=39.72 Aligned_cols=35 Identities=34% Similarity=0.571 Sum_probs=27.2
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEecCC
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKE 134 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~ 134 (152)
-+....+.||.|.||.||.+.- +.|...|+|-++-
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~i 1270 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKI 1270 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhc
Confidence 3445567899999999999975 5578889998743
No 403
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=79.84 E-value=3.3 Score=23.58 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=11.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 042973 61 GAVIFSVIVGILIFIGCIERR 81 (152)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~ 81 (152)
.+++++++++.+|++++|+.+
T Consensus 9 Pliif~ifVap~wl~lHY~~k 29 (75)
T TIGR02976 9 PLIIFVIFVAPLWLILHYRSK 29 (75)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 334445555666666666644
No 404
>PRK12274 serine/threonine protein kinase; Provisional
Probab=79.66 E-value=5.8 Score=27.54 Aligned_cols=47 Identities=9% Similarity=-0.074 Sum_probs=31.7
Q ss_pred ccCeecccCCceeeeEEcCCCCEEEEEecCCcchhH---HHHHHHHHHhhh
Q 042973 104 ESHFLGEGGFGSVYKGVLPDNTQIAVKKPKESDKIR---INQEFQKEMGIV 151 (152)
Q Consensus 104 ~~~~ig~g~~g~Vy~g~~~~~~~vavK~l~~~~~~~---~~~~f~~E~~~l 151 (152)
....|++|.||+||...- .+..++.+.+.....-. ...-|.+|+++|
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL 55 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALAL 55 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHH
Confidence 356899999999996654 57788877775433311 113577888776
No 405
>PRK09458 pspB phage shock protein B; Provisional
Probab=78.92 E-value=2.2 Score=24.16 Aligned_cols=25 Identities=16% Similarity=0.196 Sum_probs=15.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhh
Q 042973 58 AVIGAVIFSVIVGILIFIGCIERRK 82 (152)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
+.+.+++++++++.+|+++.|+.+.
T Consensus 6 l~~PliiF~ifVaPiWL~LHY~sk~ 30 (75)
T PRK09458 6 LAIPLTIFVLFVAPIWLWLHYRSKR 30 (75)
T ss_pred HHHhHHHHHHHHHHHHHHHhhcccc
Confidence 3444455566666777777776543
No 406
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=78.85 E-value=2.6 Score=25.62 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=18.7
Q ss_pred ccccCCCCCCCCccceeCCCCceeeCCCCCcC
Q 042973 11 DECLDKEKYHCEGKCKNTIGSCTCDCPIGMYG 42 (152)
Q Consensus 11 ~~C~~~~~~~c~~~C~~~~g~~~C~C~~g~~~ 42 (152)
+.|.....+.-.+.|. ......|.|.+||..
T Consensus 78 d~Cd~y~~CG~~g~C~-~~~~~~C~Cl~GF~P 108 (110)
T PF00954_consen 78 DQCDVYGFCGPNGICN-SNNSPKCSCLPGFEP 108 (110)
T ss_pred cCCCCccccCCccEeC-CCCCCceECCCCcCC
Confidence 3555433222267784 345557999999875
No 407
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=77.81 E-value=3.6 Score=25.21 Aligned_cols=11 Identities=9% Similarity=-0.085 Sum_probs=6.7
Q ss_pred cccCCceeeeE
Q 042973 109 GEGGFGSVYKG 119 (152)
Q Consensus 109 g~g~~g~Vy~g 119 (152)
..|-+|+|-+-
T Consensus 48 ~gGi~G~V~~I 58 (109)
T PRK05886 48 TSGLQATIVGI 58 (109)
T ss_pred CCCeEEEEEEE
Confidence 44557777643
No 408
>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium. Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.
Probab=77.22 E-value=0.57 Score=31.44 Aligned_cols=23 Identities=39% Similarity=0.772 Sum_probs=17.4
Q ss_pred CccceeCCCCceeeCCCCCcCCC
Q 042973 22 EGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 22 ~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
+..|....+-|.|.|..|+.++.
T Consensus 141 nE~CK~~~~~Y~C~~~~~~~~~~ 163 (197)
T PF06247_consen 141 NEECKLVDGYYKCVCKEGFPGDG 163 (197)
T ss_dssp TEEEEEETTEEEEEE-TT-EEET
T ss_pred CcceeeeCcEEEeecCCCCCCCC
Confidence 56788888889999999987766
No 409
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=76.53 E-value=5.3 Score=23.35 Aligned_cols=15 Identities=33% Similarity=0.815 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHh
Q 042973 67 VIVGILIFIGCIERR 81 (152)
Q Consensus 67 ~~~~~~~~~~~~~~~ 81 (152)
+.++++|+..+.+|+
T Consensus 45 il~VilwfvCC~kRk 59 (94)
T PF05393_consen 45 ILLVILWFVCCKKRK 59 (94)
T ss_pred HHHHHHHHHHHHHhh
Confidence 344445554444444
No 410
>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein).
Probab=76.42 E-value=3.1 Score=31.62 Aligned_cols=11 Identities=9% Similarity=0.229 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 042973 67 VIVGILIFIGC 77 (152)
Q Consensus 67 ~~~~~~~~~~~ 77 (152)
|+-++.||++.
T Consensus 383 lvGfLcWwf~c 393 (397)
T PF03302_consen 383 LVGFLCWWFIC 393 (397)
T ss_pred HHHHHhhheee
Confidence 33333444333
No 411
>PHA03265 envelope glycoprotein D; Provisional
Probab=75.16 E-value=3.4 Score=30.63 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=17.9
Q ss_pred ceeeeehhhhHHHHHHHHHHHHHHHHHHHh
Q 042973 52 HITTIVAVIGAVIFSVIVGILIFIGCIERR 81 (152)
Q Consensus 52 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
...+++++.+++.++++-+++++.+++++.
T Consensus 348 ~~~g~~ig~~i~glv~vg~il~~~~rr~k~ 377 (402)
T PHA03265 348 TFVGISVGLGIAGLVLVGVILYVCLRRKKE 377 (402)
T ss_pred cccceEEccchhhhhhhhHHHHHHhhhhhh
Confidence 345677777666666666666665555443
No 412
>PF06365 CD34_antigen: CD34/Podocalyxin family; InterPro: IPR013836 This family consists of several mammalian CD34 antigen proteins. The CD34 antigen is a human leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. CD34 is a phosphoprotein. Activation of protein kinase C (PKC) has been found to enhance CD34 phosphorylation [, ]. This family contains several eukaryotic podocalyxin proteins. Podocalyxin is a major membrane protein of the glomerular epithelium and is thought to be involved in maintenance of the architecture of the foot processes and filtration slits characteristic of this unique epithelium by virtue of its high negative charge. Podocalyxin functions as an anti-adhesin that maintains an open filtration pathway between neighbouring foot processes in the glomerular epithelium by charge repulsion [].
Probab=74.98 E-value=5 Score=27.48 Aligned_cols=28 Identities=21% Similarity=0.210 Sum_probs=13.4
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHHHHh
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCIERR 81 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
+.|++.+..++++++++++..+++++||
T Consensus 101 ~lI~lv~~g~~lLla~~~~~~Y~~~~Rr 128 (202)
T PF06365_consen 101 TLIALVTSGSFLLLAILLGAGYCCHQRR 128 (202)
T ss_pred EEEehHHhhHHHHHHHHHHHHHHhhhhc
Confidence 3344444444455555555545554444
No 413
>PF15050 SCIMP: SCIMP protein
Probab=74.82 E-value=4.4 Score=25.15 Aligned_cols=6 Identities=17% Similarity=0.534 Sum_probs=2.3
Q ss_pred eehhhh
Q 042973 56 IVAVIG 61 (152)
Q Consensus 56 ii~~~~ 61 (152)
|++++.
T Consensus 10 iiLAVa 15 (133)
T PF15050_consen 10 IILAVA 15 (133)
T ss_pred HHHHHH
Confidence 333333
No 414
>KOG4260 consensus Uncharacterized conserved protein [Function unknown]
Probab=74.04 E-value=4.2 Score=29.16 Aligned_cols=37 Identities=30% Similarity=0.688 Sum_probs=24.5
Q ss_pred cccCCCCCCC--Ccccee---CCCCceeeCCCCCcCCCCCcc
Q 042973 12 ECLDKEKYHC--EGKCKN---TIGSCTCDCPIGMYGDGKVDC 48 (152)
Q Consensus 12 ~C~~~~~~~c--~~~C~~---~~g~~~C~C~~g~~~~~~~~c 48 (152)
.|+..+.-|| +|.|.. +.|+-.|.|..||.+.....|
T Consensus 143 ~Cpggser~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~C 184 (350)
T KOG4260|consen 143 QCPGGSERPCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYC 184 (350)
T ss_pred cCCCCCcCCcCCCCcccCCCCCCCCCcccccCCCCCcccccc
Confidence 4544344567 667764 346778999999998764444
No 415
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=74.01 E-value=4.1 Score=28.02 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=26.6
Q ss_pred hCCCccCeecccCC-ceeeeEEcCCCCEEEEEec
Q 042973 100 KNYDESHFLGEGGF-GSVYKGVLPDNTQIAVKKP 132 (152)
Q Consensus 100 ~~~~~~~~ig~g~~-g~Vy~g~~~~~~~vavK~l 132 (152)
..+..-+.||.|.- |.|||..+ +|...|+|..
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf 69 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLF 69 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEe
Confidence 34444567999999 99999999 6789999993
No 416
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=73.08 E-value=4.1 Score=31.49 Aligned_cols=50 Identities=18% Similarity=0.345 Sum_probs=32.9
Q ss_pred HHHHhhhCCCccCeecccCCceeeeEEcC-------C---------CCEEEEEecCCcchhHHHHHH
Q 042973 94 KLVKATKNYDESHFLGEGGFGSVYKGVLP-------D---------NTQIAVKKPKESDKIRINQEF 144 (152)
Q Consensus 94 ~l~~~~~~~~~~~~ig~g~~g~Vy~g~~~-------~---------~~~vavK~l~~~~~~~~~~~f 144 (152)
.++.+-..|. ..-||.|....||+|++. + .+.+|||.++..-..+.+.+|
T Consensus 184 ~~~eiF~efn-~~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl 249 (565)
T KOG1236|consen 184 KIEEIFSEFN-REPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDL 249 (565)
T ss_pred cHHHHHHhcC-CcccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHH
Confidence 3444444454 346899999999999761 1 247999999876655443443
No 417
>PF14610 DUF4448: Protein of unknown function (DUF4448)
Probab=72.82 E-value=1.8 Score=29.16 Aligned_cols=23 Identities=9% Similarity=0.115 Sum_probs=8.8
Q ss_pred eeehhhhHHHHHHHHHHHHHHHH
Q 042973 55 TIVAVIGAVIFSVIVGILIFIGC 77 (152)
Q Consensus 55 ~ii~~~~~~~~~~~~~~~~~~~~ 77 (152)
.+++++-++++++++++++++++
T Consensus 159 ~laI~lPvvv~~~~~~~~~~~~~ 181 (189)
T PF14610_consen 159 ALAIALPVVVVVLALIMYGFFFW 181 (189)
T ss_pred eEEEEccHHHHHHHHHHHhhhee
Confidence 33333333343333333333333
No 418
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=72.50 E-value=3 Score=33.01 Aligned_cols=48 Identities=23% Similarity=0.278 Sum_probs=30.8
Q ss_pred CccCeecccCCceeeeEEc-CCCCEEEEEecCCc--chhHHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES--DKIRINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~--~~~~~~~~f~~E~~~l 151 (152)
..++.||+|.|..|-.+.- -.|..||||.+... +.... .....|++-|
T Consensus 21 DLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st-~hlfqEVRCM 71 (864)
T KOG4717|consen 21 DLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLST-GHLFQEVRCM 71 (864)
T ss_pred hhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhh-hHHHHHHHHH
Confidence 3356789999998875532 26889999999542 22222 4555666543
No 419
>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein. MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.
Probab=72.27 E-value=1.5 Score=21.21 Aligned_cols=25 Identities=28% Similarity=0.511 Sum_probs=19.2
Q ss_pred CCCccceeCC-CCceeeCCCCCcCCC
Q 042973 20 HCEGKCKNTI-GSCTCDCPIGMYGDG 44 (152)
Q Consensus 20 ~c~~~C~~~~-g~~~C~C~~g~~~~~ 44 (152)
|-++.|.+.. |...|.|..||..++
T Consensus 8 P~NA~C~~~~dG~eecrCllgyk~~~ 33 (37)
T PF12946_consen 8 PANAGCFRYDDGSEECRCLLGYKKVG 33 (37)
T ss_dssp -TTEEEEEETTSEEEEEE-TTEEEET
T ss_pred CCCcccEEcCCCCEEEEeeCCccccC
Confidence 3488998765 999999999998765
No 420
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=71.60 E-value=0.11 Score=36.71 Aligned_cols=48 Identities=27% Similarity=0.380 Sum_probs=29.9
Q ss_pred CCccCeecccCCceeeeEEc-CCCCEEEEEecCCc--chhHHHHHHHHHHhh
Q 042973 102 YDESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKES--DKIRINQEFQKEMGI 150 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~--~~~~~~~~f~~E~~~ 150 (152)
++..++||+|.|..||+-.- +.|+..|+|.+... +..+- ++..+|+++
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~-e~l~rEarI 63 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARI 63 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccH-HHHHHHHHH
Confidence 44456899999999998753 56777777666321 11122 556666654
No 421
>PRK06531 yajC preprotein translocase subunit YajC; Validated
Probab=71.40 E-value=4.4 Score=25.06 Aligned_cols=13 Identities=23% Similarity=0.365 Sum_probs=7.1
Q ss_pred Cee-cccCCceeee
Q 042973 106 HFL-GEGGFGSVYK 118 (152)
Q Consensus 106 ~~i-g~g~~g~Vy~ 118 (152)
+++ ..|-+|+|-+
T Consensus 42 ~VvT~GGi~G~V~~ 55 (113)
T PRK06531 42 EVVTIGGLYGTVDE 55 (113)
T ss_pred EEEECCCcEEEEEE
Confidence 344 3455777754
No 422
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=71.19 E-value=5.9 Score=23.75 Aligned_cols=12 Identities=33% Similarity=0.088 Sum_probs=7.2
Q ss_pred cccCCceeeeEE
Q 042973 109 GEGGFGSVYKGV 120 (152)
Q Consensus 109 g~g~~g~Vy~g~ 120 (152)
..|-+|+|-+-.
T Consensus 53 ~gGi~G~V~~v~ 64 (97)
T COG1862 53 IGGIVGTVTKVG 64 (97)
T ss_pred cCCeEEEEEEEe
Confidence 345577776654
No 423
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=70.86 E-value=1.1 Score=32.41 Aligned_cols=41 Identities=22% Similarity=0.319 Sum_probs=29.0
Q ss_pred eecccCCceeeeEEcCCCCEEEEEecC--CcchhHHHHHHHHHHh
Q 042973 107 FLGEGGFGSVYKGVLPDNTQIAVKKPK--ESDKIRINQEFQKEMG 149 (152)
Q Consensus 107 ~ig~g~~g~Vy~g~~~~~~~vavK~l~--~~~~~~~~~~f~~E~~ 149 (152)
.|.+...|+.|+|.| .|..+.+|.|. +.+..-+ ++|..|..
T Consensus 197 kl~e~hsgelwrgrw-qgndivakil~vr~~t~ris-rdfneefp 239 (448)
T KOG0195|consen 197 KLAESHSGELWRGRW-QGNDIVAKILNVREVTARIS-RDFNEEFP 239 (448)
T ss_pred hhccCCCcccccccc-cCcchhhhhhhhhhcchhhc-chhhhhCc
Confidence 467788899999999 56777777773 4444444 77877764
No 424
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=70.51 E-value=12 Score=26.17 Aligned_cols=28 Identities=11% Similarity=0.224 Sum_probs=23.0
Q ss_pred cCeec-ccCCceeeeEEcCCCCEEEEEecC
Q 042973 105 SHFLG-EGGFGSVYKGVLPDNTQIAVKKPK 133 (152)
Q Consensus 105 ~~~ig-~g~~g~Vy~g~~~~~~~vavK~l~ 133 (152)
..++| .|+.|+||.... ++..+++|..+
T Consensus 36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~ 64 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYR 64 (239)
T ss_pred CceeecCCCCccEEEEEe-CCceEEEEEee
Confidence 45788 899999999988 47789998774
No 425
>PF13908 Shisa: Wnt and FGF inhibitory regulator
Probab=70.41 E-value=2.7 Score=28.02 Aligned_cols=14 Identities=14% Similarity=0.226 Sum_probs=6.2
Q ss_pred eeeehhhhHHHHHH
Q 042973 54 TTIVAVIGAVIFSV 67 (152)
Q Consensus 54 ~~ii~~~~~~~~~~ 67 (152)
..|+++++++++++
T Consensus 78 ~~iivgvi~~Vi~I 91 (179)
T PF13908_consen 78 TGIIVGVICGVIAI 91 (179)
T ss_pred eeeeeehhhHHHHH
Confidence 34455454444433
No 426
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=68.76 E-value=10 Score=27.51 Aligned_cols=47 Identities=19% Similarity=0.285 Sum_probs=32.0
Q ss_pred CCccCeecccCCceeeeEEcCC-CCEEEEEecCCcchhH--HHHHHHHHH
Q 042973 102 YDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIR--INQEFQKEM 148 (152)
Q Consensus 102 ~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~--~~~~f~~E~ 148 (152)
+.....||.|+++.||..+-.. ++..|+|......... .-+++.+|.
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~ 63 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQ 63 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHH
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHH
Confidence 3345679999999999998744 7899999873322211 125666655
No 427
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=68.31 E-value=10 Score=21.88 Aligned_cols=11 Identities=27% Similarity=0.274 Sum_probs=0.0
Q ss_pred cccCCceeeeE
Q 042973 109 GEGGFGSVYKG 119 (152)
Q Consensus 109 g~g~~g~Vy~g 119 (152)
..|-+|+|-.-
T Consensus 46 ~gGi~G~V~~i 56 (82)
T PF02699_consen 46 IGGIYGTVVEI 56 (82)
T ss_dssp -----------
T ss_pred CCcEEEEEEEE
Confidence 45667776644
No 428
>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function.
Probab=68.00 E-value=8.5 Score=27.75 Aligned_cols=18 Identities=11% Similarity=-0.149 Sum_probs=8.4
Q ss_pred eeeeehhhhHHHHHHHHH
Q 042973 53 ITTIVAVIGAVIFSVIVG 70 (152)
Q Consensus 53 ~~~ii~~~~~~~~~~~~~ 70 (152)
++.+++++.++++++.++
T Consensus 212 ~W~iv~g~~~G~~~L~ll 229 (278)
T PF06697_consen 212 WWKIVVGVVGGVVLLGLL 229 (278)
T ss_pred eEEEEEEehHHHHHHHHH
Confidence 344455544444444433
No 429
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=66.32 E-value=8.5 Score=27.96 Aligned_cols=28 Identities=29% Similarity=0.399 Sum_probs=25.1
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEec
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKKP 132 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~l 132 (152)
.+.||.|.=+.||.|..++|..+|||-=
T Consensus 96 G~~IGvGKEsdVY~~~~~~g~~~~vKfH 123 (304)
T COG0478 96 GTKIGVGKESDVYVAIDPKGRKVAVKFH 123 (304)
T ss_pred ccccccCccceEEEEECCCCCEEEEEEe
Confidence 4679999999999999999999999854
No 430
>PF12301 CD99L2: CD99 antigen like protein 2; InterPro: IPR022078 This family of proteins is found in eukaryotes. Proteins in this family are typically between 165 and 237 amino acids in length. CD99L2 and CD99 are involved in trans-endothelial migration of neutrophils in vitro and in the recruitment of neutrophils into inflamed peritoneum.
Probab=66.31 E-value=9.2 Score=25.45 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=17.1
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHHHHhh
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCIERRK 82 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
..+|.+++.++++.++.++--++.|+||+
T Consensus 114 ~g~IaGIvsav~valvGAvsSyiaYqkKK 142 (169)
T PF12301_consen 114 AGTIAGIVSAVVVALVGAVSSYIAYQKKK 142 (169)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45666666555555555555566666554
No 431
>PF05808 Podoplanin: Podoplanin; InterPro: IPR008783 This family consists of several mammalian podoplanin-like proteins which are thought to control specifically the unique shape of podocytes [].; GO: 0016021 integral to membrane; PDB: 3IET_X.
Probab=64.73 E-value=2.1 Score=28.02 Aligned_cols=22 Identities=14% Similarity=0.007 Sum_probs=0.0
Q ss_pred eeeehhhhHHHHHHHHHHHHHH
Q 042973 54 TTIVAVIGAVIFSVIVGILIFI 75 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~ 75 (152)
+.|++++++++.++..++++++
T Consensus 132 VGIIVGVLlaIG~igGIIivvv 153 (162)
T PF05808_consen 132 VGIIVGVLLAIGFIGGIIIVVV 153 (162)
T ss_dssp ----------------------
T ss_pred eeehhhHHHHHHHHhheeeEEe
Confidence 4555555555544444444433
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=64.29 E-value=2.1 Score=33.38 Aligned_cols=50 Identities=22% Similarity=0.461 Sum_probs=33.3
Q ss_pred hhCCCccCeecccCCceeeeEEcCC-CCEEEEEecCCcchhHHHHHHHHHH
Q 042973 99 TKNYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKESDKIRINQEFQKEM 148 (152)
Q Consensus 99 ~~~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~~~~~~~~~~f~~E~ 148 (152)
.++|.....+|.|+||.|+.+.... +...|||+|...+....+..-++|+
T Consensus 48 a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~ 98 (516)
T KOG1033|consen 48 ANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREV 98 (516)
T ss_pred hccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccc
Confidence 3567777889999999999887643 4478999886544433223333333
No 433
>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains. They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].
Probab=63.79 E-value=9.7 Score=26.30 Aligned_cols=22 Identities=32% Similarity=0.462 Sum_probs=12.0
Q ss_pred ceeeeehhhhHHHHHHHHHHHH
Q 042973 52 HITTIVAVIGAVIFSVIVGILI 73 (152)
Q Consensus 52 ~~~~ii~~~~~~~~~~~~~~~~ 73 (152)
.+++++.|+++++++|++++++
T Consensus 39 I~iaiVAG~~tVILVI~i~v~v 60 (221)
T PF08374_consen 39 IMIAIVAGIMTVILVIFIVVLV 60 (221)
T ss_pred eeeeeecchhhhHHHHHHHHHH
Confidence 4455666666666555554444
No 434
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=62.50 E-value=14 Score=22.52 Aligned_cols=11 Identities=36% Similarity=0.329 Sum_probs=7.5
Q ss_pred cccCCceeeeE
Q 042973 109 GEGGFGSVYKG 119 (152)
Q Consensus 109 g~g~~g~Vy~g 119 (152)
..|-+|+|-.-
T Consensus 62 ~gGi~G~Vv~i 72 (106)
T PRK05585 62 NGGIIGKVTKV 72 (106)
T ss_pred CCCeEEEEEEE
Confidence 56668887654
No 435
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=59.96 E-value=11 Score=21.83 Aligned_cols=10 Identities=40% Similarity=0.355 Sum_probs=6.2
Q ss_pred cccCCceeee
Q 042973 109 GEGGFGSVYK 118 (152)
Q Consensus 109 g~g~~g~Vy~ 118 (152)
..|-+|+|-.
T Consensus 47 ~gGi~G~V~~ 56 (84)
T TIGR00739 47 IGGIIGTVTK 56 (84)
T ss_pred CCCeEEEEEE
Confidence 4556777663
No 436
>PF04689 S1FA: DNA binding protein S1FA; InterPro: IPR006779 S1FA is an unusual small plant peptide of only 70 amino acids with a basic domain which contains a nuclear localization signal and a putative DNA binding helix. S1FA is highly conserved between dicotyledonous and monocotyledonous plants and may be a DNA-binding protein that specifically recognises the negative promoter element S1F [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=59.22 E-value=24 Score=19.30 Aligned_cols=9 Identities=11% Similarity=-0.079 Sum_probs=3.3
Q ss_pred HHHHHHHHH
Q 042973 63 VIFSVIVGI 71 (152)
Q Consensus 63 ~~~~~~~~~ 71 (152)
.+++++++.
T Consensus 22 g~ll~flvG 30 (69)
T PF04689_consen 22 GLLLVFLVG 30 (69)
T ss_pred HHHHHHHHH
Confidence 333333333
No 437
>PF15069 FAM163: FAM163 family
Probab=59.00 E-value=21 Score=23.01 Aligned_cols=10 Identities=10% Similarity=0.185 Sum_probs=5.1
Q ss_pred CCCEEEEEec
Q 042973 123 DNTQIAVKKP 132 (152)
Q Consensus 123 ~~~~vavK~l 132 (152)
.|+.++.+-+
T Consensus 110 GgeR~~y~~~ 119 (143)
T PF15069_consen 110 GGERISYTPT 119 (143)
T ss_pred CCceecccce
Confidence 4555555444
No 438
>PF08116 Toxin_29: PhTx neurotoxin family; InterPro: IPR012634 This family consists of PhTx insecticidal neurotoxins that are found in the venom of Phoneutria nigriventer (Brazilian armed spider). The venom of the P. nigrivente contains numerous neurotoxic polypeptides of 30-140 amino acids, which exert a range of biological effects. While some of these neurotoxins are lethal to mice after intracerebroventricular injections, others are extremely toxic to insects of the orders Diptera and Dictyoptera but had much weaker toxic effects on mice [].; GO: 0009405 pathogenesis, 0005576 extracellular region
Probab=58.80 E-value=2.1 Score=19.29 Aligned_cols=8 Identities=38% Similarity=1.539 Sum_probs=4.5
Q ss_pred CCccceeC
Q 042973 21 CEGKCKNT 28 (152)
Q Consensus 21 c~~~C~~~ 28 (152)
|+|+|.+.
T Consensus 17 C~G~C~tA 24 (31)
T PF08116_consen 17 CNGRCRTA 24 (31)
T ss_pred ecchhHHH
Confidence 46666553
No 439
>KOG1217 consensus Fibrillins and related proteins containing Ca2+-binding EGF-like domains [Signal transduction mechanisms]
Probab=58.46 E-value=11 Score=28.55 Aligned_cols=36 Identities=39% Similarity=0.812 Sum_probs=28.5
Q ss_pred CcccccccCCCCCCC--CccceeCCCCceeeCCCCCcCCC
Q 042973 7 VTDIDECLDKEKYHC--EGKCKNTIGSCTCDCPIGMYGDG 44 (152)
Q Consensus 7 C~~~~~C~~~~~~~c--~~~C~~~~g~~~C~C~~g~~~~~ 44 (152)
|++.++|.... + | +++|.+..+.+.|.|+.|+.+..
T Consensus 268 ~~~~~~C~~~~-~-c~~~~~C~~~~~~~~C~C~~g~~g~~ 305 (487)
T KOG1217|consen 268 CVDVDSCALIA-S-CPNGGTCVNVPGSYRCTCPPGFTGRL 305 (487)
T ss_pred eeeccccCCCC-c-cCCCCeeecCCCcceeeCCCCCCCCC
Confidence 55788887532 2 5 68999998889999999998866
No 440
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=57.50 E-value=1.7 Score=28.20 Aligned_cols=21 Identities=29% Similarity=0.344 Sum_probs=12.3
Q ss_pred eeehhhhHHHHHHH-HHHHHHH
Q 042973 55 TIVAVIGAVIFSVI-VGILIFI 75 (152)
Q Consensus 55 ~ii~~~~~~~~~~~-~~~~~~~ 75 (152)
-|++|+++++.+.+ +++++++
T Consensus 49 nIVIGvVVGVGg~ill~il~lv 70 (154)
T PF04478_consen 49 NIVIGVVVGVGGPILLGILALV 70 (154)
T ss_pred cEEEEEEecccHHHHHHHHHhh
Confidence 57777777765544 4444443
No 441
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=56.42 E-value=25 Score=22.74 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=16.5
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHHHHh
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCIERR 81 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
..|++++.+.++++++++.|+-.+.+|+
T Consensus 32 ~tILiaIvVliiiiivli~lcssRKkKa 59 (189)
T PF05568_consen 32 YTILIAIVVLIIIIIVLIYLCSSRKKKA 59 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 4455555555555566666666776655
No 442
>PF14584 DUF4446: Protein of unknown function (DUF4446)
Probab=55.43 E-value=19 Score=23.50 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=12.6
Q ss_pred cccCCceeeeEEc-CCCCEEEEEecC
Q 042973 109 GEGGFGSVYKGVL-PDNTQIAVKKPK 133 (152)
Q Consensus 109 g~g~~g~Vy~g~~-~~~~~vavK~l~ 133 (152)
...+-|.|..+.+ +++..+=+|-+.
T Consensus 106 D~~~nGvVltsI~~Re~s~~YaK~I~ 131 (151)
T PF14584_consen 106 DDNNNGVVLTSIHSREESRTYAKPIV 131 (151)
T ss_pred eCCCCEEEEEeeecCCCcEEEEEEec
Confidence 3444455555544 344455556553
No 443
>PF13268 DUF4059: Protein of unknown function (DUF4059)
Probab=51.46 E-value=42 Score=18.85 Aligned_cols=19 Identities=21% Similarity=0.223 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 042973 66 SVIVGILIFIGCIERRKQK 84 (152)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~ 84 (152)
++++..+|+.++..|++.|
T Consensus 20 V~~~~~~wi~~Ra~~~~DK 38 (72)
T PF13268_consen 20 VLLVSGIWILWRALRKKDK 38 (72)
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 3444455555555555443
No 444
>PF15102 TMEM154: TMEM154 protein family
Probab=51.46 E-value=8 Score=24.99 Aligned_cols=10 Identities=10% Similarity=0.119 Sum_probs=4.4
Q ss_pred ehhhhHH-HHH
Q 042973 57 VAVIGAV-IFS 66 (152)
Q Consensus 57 i~~~~~~-~~~ 66 (152)
++.+++. +++
T Consensus 58 iLmIlIP~VLL 68 (146)
T PF15102_consen 58 ILMILIPLVLL 68 (146)
T ss_pred EEEEeHHHHHH
Confidence 4444444 443
No 445
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=50.66 E-value=14 Score=30.26 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=33.0
Q ss_pred CccCeecccCCceeeeEEc-CCCCEEEEEecCCcchh--HHHHHHHHHHhhh
Q 042973 103 DESHFLGEGGFGSVYKGVL-PDNTQIAVKKPKESDKI--RINQEFQKEMGIV 151 (152)
Q Consensus 103 ~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l~~~~~~--~~~~~f~~E~~~l 151 (152)
.....||.|+-|.|-.|+- .-|+.+|||.+...... .......+|+.+|
T Consensus 15 kLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviM 66 (786)
T KOG0588|consen 15 KLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIM 66 (786)
T ss_pred eccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHH
Confidence 3356789999999988864 55899999999544211 1114556666555
No 446
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=49.71 E-value=5.8 Score=29.70 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=27.3
Q ss_pred hCCCccCeecccCCceeeeEEcCC-CCEEEEEecCC
Q 042973 100 KNYDESHFLGEGGFGSVYKGVLPD-NTQIAVKKPKE 134 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~~~-~~~vavK~l~~ 134 (152)
..|....+||+|+|..|....+.. .+..|+|.++.
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkk 285 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKK 285 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHH
Confidence 356667789999999999988743 56789998854
No 447
>KOG3607 consensus Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family [Posttranslational modification, protein turnover, chaperones]
Probab=48.77 E-value=36 Score=28.24 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=10.9
Q ss_pred CceeeCCCCCcCCC
Q 042973 31 SCTCDCPIGMYGDG 44 (152)
Q Consensus 31 ~~~C~C~~g~~~~~ 44 (152)
...|+|..|+....
T Consensus 641 ~~~ChC~~gwapp~ 654 (716)
T KOG3607|consen 641 ELNCHCEPGWAPPF 654 (716)
T ss_pred CcceeeCCCCCCCc
Confidence 45799999988765
No 448
>KOG3516 consensus Neurexin IV [Signal transduction mechanisms]
Probab=48.17 E-value=16 Score=31.72 Aligned_cols=35 Identities=31% Similarity=0.730 Sum_probs=26.9
Q ss_pred CcccccccCCCCCCC--CccceeCCCCceeeCC-CCCcCCC
Q 042973 7 VTDIDECLDKEKYHC--EGKCKNTIGSCTCDCP-IGMYGDG 44 (152)
Q Consensus 7 C~~~~~C~~~~~~~c--~~~C~~~~g~~~C~C~-~g~~~~~ 44 (152)
|.-.+-|. +.|| +|.|.-....|.|.|. .||.+..
T Consensus 542 C~i~drCl---PN~CehgG~C~Qs~~~f~C~C~~TGY~Gat 579 (1306)
T KOG3516|consen 542 CGISDRCL---PNPCEHGGKCSQSWDDFECNCELTGYKGAT 579 (1306)
T ss_pred cccccccC---CccccCCCcccccccceeEecccccccccc
Confidence 66666663 4578 7789888889999997 8887754
No 449
>PF09919 DUF2149: Uncharacterized conserved protein (DUF2149); InterPro: IPR018676 This family of conserved hypothetical proteins has no known function.
Probab=47.38 E-value=30 Score=20.55 Aligned_cols=19 Identities=42% Similarity=0.795 Sum_probs=14.3
Q ss_pred ccc-CCceeeeEEcCCCCEEEE
Q 042973 109 GEG-GFGSVYKGVLPDNTQIAV 129 (152)
Q Consensus 109 g~g-~~g~Vy~g~~~~~~~vav 129 (152)
|+| ..|++|+ +++|..+-|
T Consensus 71 G~G~~~G~aYr--l~~Gk~I~V 90 (92)
T PF09919_consen 71 GSGERLGTAYR--LKDGKLIYV 90 (92)
T ss_pred CCCeECeEEEE--cCCceEEEe
Confidence 555 6899999 778877655
No 450
>PF11857 DUF3377: Domain of unknown function (DUF3377); InterPro: IPR021805 This domain is functionally uncharacterised and found at the C terminus of peptidases belonging to MEROPS peptidase family M10A, membrane-type matrix metallopeptidases (clan MA). ; GO: 0004222 metalloendopeptidase activity
Probab=47.00 E-value=19 Score=20.41 Aligned_cols=14 Identities=21% Similarity=0.240 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHHHH
Q 042973 63 VIFSVIVGILIFIG 76 (152)
Q Consensus 63 ~~~~~~~~~~~~~~ 76 (152)
.+++.+++.++.++
T Consensus 39 ~L~LCiLvl~yai~ 52 (74)
T PF11857_consen 39 VLLLCILVLIYAIF 52 (74)
T ss_pred HHHHHHHHHHHHhh
Confidence 33333333333333
No 451
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=46.27 E-value=33 Score=19.94 Aligned_cols=20 Identities=15% Similarity=0.262 Sum_probs=9.3
Q ss_pred eeeehhhhHHHHHHHHHHHH
Q 042973 54 TTIVAVIGAVIFSVIVGILI 73 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~ 73 (152)
++|.+.++++++++++.+++
T Consensus 38 IVI~FWv~LA~FV~~lF~iL 57 (90)
T PF15183_consen 38 IVIAFWVSLAAFVVFLFLIL 57 (90)
T ss_pred eehhHHHHHHHHHHHHHHHH
Confidence 44445555555444444333
No 452
>PF10389 CoatB: Bacteriophage coat protein B ; InterPro: IPR008020 The major coat protein in the capsid of filamentous bacteriophage forms a helical assembly of about 7000 identical protomers, with each protomer comprised of 46 amino acids, after the cleavage of the signal peptide. Each protomer forms a slightly curved helix that combines to form a tubular structure that encapsulates the viral DNA [].; PDB: 2IFO_A.
Probab=44.96 E-value=44 Score=17.06 Aligned_cols=13 Identities=15% Similarity=0.176 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHHH
Q 042973 68 IVGILIFIGCIER 80 (152)
Q Consensus 68 ~~~~~~~~~~~~~ 80 (152)
+++.+..+.+.||
T Consensus 32 v~V~i~v~kwiRr 44 (46)
T PF10389_consen 32 VIVGIAVYKWIRR 44 (46)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3333444444443
No 453
>KOG1226 consensus Integrin beta subunit (N-terminal portion of extracellular region) [Signal transduction mechanisms; Extracellular structures]
Probab=44.76 E-value=49 Score=27.50 Aligned_cols=22 Identities=23% Similarity=0.196 Sum_probs=9.9
Q ss_pred eeeehhhhHHHHHHHHHHHHHH
Q 042973 54 TTIVAVIGAVIFSVIVGILIFI 75 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~ 75 (152)
+.|+++++++++++.++++++|
T Consensus 714 ~~i~lgvv~~ivligl~llliw 735 (783)
T KOG1226|consen 714 LAIVLGVVAGIVLIGLALLLIW 735 (783)
T ss_pred eeehHHHHHHHHHHHHHHHHHH
Confidence 4455545444444444443333
No 454
>KOG3637 consensus Vitronectin receptor, alpha subunit [Extracellular structures]
Probab=44.37 E-value=24 Score=30.51 Aligned_cols=25 Identities=8% Similarity=0.115 Sum_probs=13.0
Q ss_pred ceeeeehhhhHHHHHHHHHHHHHHH
Q 042973 52 HITTIVAVIGAVIFSVIVGILIFIG 76 (152)
Q Consensus 52 ~~~~ii~~~~~~~~~~~~~~~~~~~ 76 (152)
++++|++++++++++++++++++|.
T Consensus 977 p~wiIi~svl~GLLlL~llv~~LwK 1001 (1030)
T KOG3637|consen 977 PLWIIILSVLGGLLLLALLVLLLWK 1001 (1030)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHh
Confidence 4455555555555555555444443
No 455
>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function. It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO
Probab=43.11 E-value=30 Score=17.63 Aligned_cols=12 Identities=42% Similarity=1.024 Sum_probs=8.8
Q ss_pred eeeCCCCCcCCC
Q 042973 33 TCDCPIGMYGDG 44 (152)
Q Consensus 33 ~C~C~~g~~~~~ 44 (152)
.|.|+.|+...+
T Consensus 38 ~C~C~~g~~~~~ 49 (52)
T PF01683_consen 38 RCQCPPGYVEVG 49 (52)
T ss_pred EeECCCCCEecC
Confidence 788988876543
No 456
>PTZ00234 variable surface protein Vir12; Provisional
Probab=42.76 E-value=48 Score=25.73 Aligned_cols=16 Identities=6% Similarity=0.109 Sum_probs=7.7
Q ss_pred HhhhHHHHHHhhhCCC
Q 042973 88 KKWCAAKLVKATKNYD 103 (152)
Q Consensus 88 ~~~~~~~l~~~~~~~~ 103 (152)
+.=-|+|-+.....+.
T Consensus 404 ehnyyeeyEkel~~y~ 419 (433)
T PTZ00234 404 QNNYYDEYEEELPRYE 419 (433)
T ss_pred hhhhHHHHHHhhcccc
Confidence 3334566555544443
No 457
>KOG3054 consensus Uncharacterized conserved protein [Function unknown]
Probab=42.57 E-value=30 Score=24.53 Aligned_cols=15 Identities=20% Similarity=0.295 Sum_probs=5.5
Q ss_pred hhHHHHHHHHHHHHH
Q 042973 60 IGAVIFSVIVGILIF 74 (152)
Q Consensus 60 ~~~~~~~~~~~~~~~ 74 (152)
+++++++++++++++
T Consensus 7 vlVaa~llV~~i~l~ 21 (299)
T KOG3054|consen 7 VLVAAALLVAVILLF 21 (299)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 458
>PF01299 Lamp: Lysosome-associated membrane glycoprotein (Lamp); InterPro: IPR002000 Lysosome-associated membrane glycoproteins (lamp) [] are integral membrane proteins, specific to lysosomes, and whose exact biological function is not yet clear. Structurally, the lamp proteins consist of two internally homologous lysosome-luminal domains separated by a proline-rich hinge region; at the C-terminal extremity there is a transmembrane region (TM) followed by a very short cytoplasmic tail (C). In each of the duplicated domains, there are two conserved disulphide bonds. This structure is schematically represented in the figure below. +-----+ +-----+ +-----+ +-----+ | | | | | | | | xCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxxxCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxx +--------------------------++Hinge++--------------------------++TM++C+ In mammals, there are two closely related types of lamp: lamp-1 and lamp-2, which form major components of the lysosome membrane. In chicken lamp-1 is known as LEP100. Also included in this entry is the macrophage protein CD68 (or macrosialin) [] is a heavily glycosylated integral membrane protein whose structure consists of a mucin-like domain followed by a proline-rich hinge; a single lamp-like domain; a transmembrane region and a short cytoplasmic tail. Similar to CD68, mammalian lamp-3, which is expressed in lymphoid organs, dendritic cells and in lung, contains all the C-terminal regions but lacks the N-terminal lamp-like region []. In a lamp-family protein from nematodes [] only the part C-terminal to the hinge is conserved. ; GO: 0016020 membrane
Probab=42.24 E-value=5.7 Score=28.97 Aligned_cols=11 Identities=36% Similarity=0.150 Sum_probs=4.3
Q ss_pred HHHHHHHHHhh
Q 042973 72 LIFIGCIERRK 82 (152)
Q Consensus 72 ~~~~~~~~~~~ 82 (152)
++.+++.|||.
T Consensus 289 LiaYli~Rrr~ 299 (306)
T PF01299_consen 289 LIAYLIGRRRS 299 (306)
T ss_pred HHhheeEeccc
Confidence 33334444443
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=41.58 E-value=39 Score=24.31 Aligned_cols=29 Identities=28% Similarity=0.298 Sum_probs=23.3
Q ss_pred ecccCCceeeeEEcCCCCEEEEEecCCcc
Q 042973 108 LGEGGFGSVYKGVLPDNTQIAVKKPKESD 136 (152)
Q Consensus 108 ig~g~~g~Vy~g~~~~~~~vavK~l~~~~ 136 (152)
|..|.=..||+|.-.++..+|||+.+...
T Consensus 56 istGKEA~Vy~a~~~~~~~~avKiyr~~t 84 (268)
T COG1718 56 ISTGKEANVYLAETGDGRYVAVKIYRTST 84 (268)
T ss_pred ecCCcceEEEeeccCCCceEEEEEEehhh
Confidence 45677778999988788999999986543
No 460
>PTZ00046 rifin; Provisional
Probab=40.42 E-value=45 Score=25.10 Aligned_cols=24 Identities=38% Similarity=0.382 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhh
Q 042973 63 VIFSVIVGILIFIGCIERRKQKNF 86 (152)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~ 86 (152)
++++++++++++++...|.+++.-
T Consensus 322 iAIvVIVLIMvIIYLILRYRRKKK 345 (358)
T PTZ00046 322 VAIVVIVLIMVIIYLILRYRRKKK 345 (358)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcch
Confidence 334444455556666677777643
No 461
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=40.10 E-value=47 Score=24.98 Aligned_cols=23 Identities=30% Similarity=0.329 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhh
Q 042973 64 IFSVIVGILIFIGCIERRKQKNF 86 (152)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~ 86 (152)
+++++++++++++...|.+++.-
T Consensus 318 AIvvIVLIMvIIYLILRYRRKKK 340 (353)
T TIGR01477 318 AILIIVLIMVIIYLILRYRRKKK 340 (353)
T ss_pred HHHHHHHHHHHHHHHHHhhhcch
Confidence 33444445555666677777643
No 462
>PF02430 AMA-1: Apical membrane antigen 1; InterPro: IPR003298 A novel antigen of Plasmodium falciparum has been cloned that contains a hydrophobic domain typical of an integral membrane protein. The antigen is designated apical membrane antigen 1 (AMA-1) by virtue of appearing to be located in the apical complex []. AMA-1 appears to be transported to the merozoite surface close to the time of schizont rupture. The 66kDa merozoite surface antigen (PK66) of Plasmodium knowlesi, a simian malaria, possesses vaccine-related properties believed to originate from a receptor-like role in parasite invasion of erythrocytes []. The sequence of PK66 is conserved throughout plasmodium, and shows high similarity to P. falciparum AMA-1. Following schizont rupture, the distribution of PK66 changes in a coordinate manner associated with merozoite invasion. Prior to rupture, the protein is concentrated at the apical end, following which it distributes itself entirely across the surface of the free merozoite. Immunofluorescence studies suggest that, during invasion, PK66 is excluded from the erythrocyte at, and behind, the invasion interface []. ; GO: 0009405 pathogenesis, 0016020 membrane; PDB: 2Y8R_D 2X2Z_A 2Y8T_A 2Y8S_D 1HN6_A 2Z8V_B 2Z8W_A 1Z40_E 2Q8B_A 2Q8A_A ....
Probab=39.91 E-value=9.6 Score=29.39 Aligned_cols=28 Identities=11% Similarity=0.137 Sum_probs=0.0
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHHHHh
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCIERR 81 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
++|++.+.++++++.+++.|++.+.++.
T Consensus 430 ~~~~~~~~~~~~~~~l~~~~~~k~~~~~ 457 (471)
T PF02430_consen 430 IVIIISIATGAVLLALAIYWYYKRLWKT 457 (471)
T ss_dssp ----------------------------
T ss_pred eehhhHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4455555555555556666665544443
No 463
>PF11403 Yeast_MT: Yeast metallothionein; InterPro: IPR022710 Metallothioneins are characterised by an abundance of cysteine residues and a lack of generic secondary structure motifs. This protein functions in primary metal storage, transport and detoxification []. For the first 40 residues in the protein the polypeptide wraps around the metal by forming two large parallel loops separated by a deep cleft containing the metal cluster []. ; PDB: 1AQS_A 1AQR_A 1RJU_V 1FMY_A 1AOO_A 1AQQ_A.
Probab=39.11 E-value=38 Score=15.84 Aligned_cols=13 Identities=38% Similarity=0.991 Sum_probs=7.3
Q ss_pred ceeeCCCCCcCCC
Q 042973 32 CTCDCPIGMYGDG 44 (152)
Q Consensus 32 ~~C~C~~g~~~~~ 44 (152)
..|.|+.|...++
T Consensus 22 kscscptgcnsdd 34 (40)
T PF11403_consen 22 KSCSCPTGCNSDD 34 (40)
T ss_dssp TS-SS-TTTTSST
T ss_pred hcCCCCCCCCCCC
Confidence 3577888776655
No 464
>PF14380 WAK_assoc: Wall-associated receptor kinase C-terminal
Probab=38.02 E-value=25 Score=20.66 Aligned_cols=19 Identities=32% Similarity=0.634 Sum_probs=14.4
Q ss_pred CccceeCC--CCceeeCCCCC
Q 042973 22 EGKCKNTI--GSCTCDCPIGM 40 (152)
Q Consensus 22 ~~~C~~~~--g~~~C~C~~g~ 40 (152)
+|.|.... ..+.|.|++|.
T Consensus 74 gG~Cgy~~~~~~f~C~C~dg~ 94 (94)
T PF14380_consen 74 GGRCGYDSNSEQFTCFCSDGP 94 (94)
T ss_pred CCEeCCCCCCceEEEECCCCC
Confidence 67898654 47889999873
No 465
>PTZ00087 thrombosponding-related protein; Provisional
Probab=37.31 E-value=98 Score=22.46 Aligned_cols=8 Identities=25% Similarity=0.862 Sum_probs=4.0
Q ss_pred CCCCccce
Q 042973 19 YHCEGKCK 26 (152)
Q Consensus 19 ~~c~~~C~ 26 (152)
.+|..+|+
T Consensus 240 S~CSkTCG 247 (340)
T PTZ00087 240 SNCSMECD 247 (340)
T ss_pred CCcCcccC
Confidence 34555555
No 466
>smart00811 Alpha_kinase Alpha-kinase family. This family is a novel family of eukaryotic protein kinase catalytic domains, which have no detectable similarity to conventional kinases. The family contains myosin heavy chain kinases and Elongation Factor-2 kinase and a bifunctional ion channel. This family is known as the alpha-kinase family. The structure of the kinase domain revealed unexpected similarity to eukaryotic protein kinases in the catalytic core as well as to metabolic enzymes with ATP-grasp domains.
Probab=37.25 E-value=1e+02 Score=21.02 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=24.1
Q ss_pred CeecccCCceeeeEEc----CCCCEEEEEecCCcc
Q 042973 106 HFLGEGGFGSVYKGVL----PDNTQIAVKKPKESD 136 (152)
Q Consensus 106 ~~ig~g~~g~Vy~g~~----~~~~~vavK~l~~~~ 136 (152)
...++|++-.+|++.. ..+...++|..+...
T Consensus 17 ~pFa~G~~R~a~~~~~~~~~~~~~~~V~K~~~~~~ 51 (198)
T smart00811 17 KPFAKGAMRVAFRVKDLSEFGSGTECVAKYFKKEY 51 (198)
T ss_pred CccCCCceeeeEEEEEeccCCCCCEEEEEEecccc
Confidence 3458999999999986 357889999886543
No 467
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=36.46 E-value=20 Score=31.39 Aligned_cols=31 Identities=19% Similarity=0.107 Sum_probs=25.6
Q ss_pred CCCccCeecccCCceeeeEEcCCCCEEEEEec
Q 042973 101 NYDESHFLGEGGFGSVYKGVLPDNTQIAVKKP 132 (152)
Q Consensus 101 ~~~~~~~ig~g~~g~Vy~g~~~~~~~vavK~l 132 (152)
++...+.+|++.|=.|.++.-+.|. |.||.+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVF 54 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVF 54 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEE
Confidence 4555678999999999999987776 888877
No 468
>PRK14051 negative regulator GrlR; Provisional
Probab=36.20 E-value=50 Score=20.21 Aligned_cols=27 Identities=30% Similarity=0.633 Sum_probs=19.4
Q ss_pred cCeecccCCceeeeEEcCCCCEEEEEe
Q 042973 105 SHFLGEGGFGSVYKGVLPDNTQIAVKK 131 (152)
Q Consensus 105 ~~~ig~g~~g~Vy~g~~~~~~~vavK~ 131 (152)
.+.|--|.++.+|.|.+.+...+.+++
T Consensus 28 ~nkInGGD~~~~YqG~isEd~~iilhv 54 (123)
T PRK14051 28 GNMITGGDIASVYQGVLSEDEDIILHV 54 (123)
T ss_pred CCEecCCccceEEeccccccceeEEEE
Confidence 456777899999999996654444443
No 469
>PTZ00208 65 kDa invariant surface glycoprotein; Provisional
Probab=35.64 E-value=13 Score=28.21 Aligned_cols=28 Identities=14% Similarity=0.235 Sum_probs=0.0
Q ss_pred eeehhhhHHHHHHHHHHHHHHHHHHHhh
Q 042973 55 TIVAVIGAVIFSVIVGILIFIGCIERRK 82 (152)
Q Consensus 55 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
.|++++++.+++++++...++++.+||+
T Consensus 387 ~i~~avl~p~~il~~~~~~~~~~v~rrr 414 (436)
T PTZ00208 387 MIILAVLVPAIILAIIAVAFFIMVKRRR 414 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHhheeeeecc
No 470
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=35.42 E-value=50 Score=17.24 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=0.0
Q ss_pred eeehhhhHHHHHHHHHHHHHHHHHHH
Q 042973 55 TIVAVIGAVIFSVIVGILIFIGCIER 80 (152)
Q Consensus 55 ~ii~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
.+.+.+.+++++.+++++++++..|+
T Consensus 3 il~~LIpiSl~l~~~~l~~f~Wavk~ 28 (51)
T TIGR00847 3 ILTILIPISLLLGGVGLVAFLWSLKS 28 (51)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcc
No 471
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=34.52 E-value=36 Score=25.05 Aligned_cols=52 Identities=19% Similarity=0.319 Sum_probs=0.0
Q ss_pred hCCCccCeecccCCceeeeEEc-CCCCEEEEEec-------CCcchhHHHHHHHHHHhhh
Q 042973 100 KNYDESHFLGEGGFGSVYKGVL-PDNTQIAVKKP-------KESDKIRINQEFQKEMGIV 151 (152)
Q Consensus 100 ~~~~~~~~ig~g~~g~Vy~g~~-~~~~~vavK~l-------~~~~~~~~~~~f~~E~~~l 151 (152)
.++.+.+++|.|....|-+... +.|...|+|++ .........++-.+|+++|
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~IL 76 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISIL 76 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHH
No 472
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.50 E-value=82 Score=17.67 Aligned_cols=39 Identities=8% Similarity=0.085 Sum_probs=0.0
Q ss_pred eehhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHhhhHHH
Q 042973 56 IVAVIGAVIFSVIVGILIFIGCIERRKQKNFLKKWCAAK 94 (152)
Q Consensus 56 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (152)
+.+++++..+.+++.++.-++.-+|.-++...+.-...|
T Consensus 3 l~lail~ivl~ll~G~~~G~fiark~~~k~lk~NPpine 41 (71)
T COG3763 3 LWLAILLIVLALLAGLIGGFFIARKQMKKQLKDNPPINE 41 (71)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCH
No 473
>PF09716 ETRAMP: Malarial early transcribed membrane protein (ETRAMP); InterPro: IPR006389 These sequences represent a family of proteins from the malaria parasite Plasmodium falciparum, several of which have been shown to be expressed specifically in the ring stage as well as the rodent parasite Plasmodium yoelii []. A homologue from Plasmodium chabaudi was localized to the parasitophorous vacuole membrane []. Members have an initial hydrophobic, Phe/Tyr-rich stretch long enough to span the membrane, a highly charged region rich in Lys, a second putative transmembrane region, and a second highly charged, low complexity sequence region. Some members have up to 100 residues of additional C-terminal sequence. These genes have been shown to be found in the sub-telomeric regions of both Plasmodium falciparum and P. yoelii chromosomes.
Probab=34.39 E-value=65 Score=18.67 Aligned_cols=29 Identities=17% Similarity=0.270 Sum_probs=0.0
Q ss_pred eehhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 042973 56 IVAVIGAVIFSVIVGILIFIGCIERRKQK 84 (152)
Q Consensus 56 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
+++.++...+++++..++.+..+.+++++
T Consensus 56 iiiS~i~s~lalli~~~~G~g~y~~~k~k 84 (84)
T PF09716_consen 56 IIISTIASGLALLIATALGYGYYKKKKKK 84 (84)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCC
No 474
>PF12259 DUF3609: Protein of unknown function (DUF3609); InterPro: IPR022048 This domain family is found in eukaryotes and viruses, and is typically between 348 and 360 amino acids in length.
Probab=34.25 E-value=47 Score=25.10 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=0.0
Q ss_pred ceeeeehhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 042973 52 HITTIVAVIGAVIFSVIVGILIFIGCIERRKQK 84 (152)
Q Consensus 52 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
+...+.+...++++++++.++|++...+++..+
T Consensus 297 ~~~~i~v~~~~vli~vl~~~~~~~~~~~~~~~~ 329 (361)
T PF12259_consen 297 PIVHIAVCGAIVLIIVLISLAWLYRTFRRRQLR 329 (361)
T ss_pred ceEEEehhHHHHHHHHHHHHHhheeehHHHHhh
No 475
>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []. These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs The PAN-3 or CW is a domain associated with a number of Caenorhabditis elegans hypothetical proteins.
Probab=34.12 E-value=49 Score=17.91 Aligned_cols=21 Identities=24% Similarity=0.298 Sum_probs=0.0
Q ss_pred cCCceeeeEEcCCCCEEEEEe
Q 042973 111 GGFGSVYKGVLPDNTQIAVKK 131 (152)
Q Consensus 111 g~~g~Vy~g~~~~~~~vavK~ 131 (152)
|...+|-+..-.+|..||+|+
T Consensus 51 ~~i~~v~~~~~~~~~~VA~K~ 71 (71)
T PF08277_consen 51 GSISTVQKTDSSSGNKVAFKI 71 (71)
T ss_pred CCEEEEEEeecCCCeEEEEEC
No 476
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=33.99 E-value=64 Score=22.14 Aligned_cols=31 Identities=23% Similarity=0.171 Sum_probs=0.0
Q ss_pred CCCCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 122 PDNTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 122 ~~~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
.....+|+|.+.........+.|.+|+.+++
T Consensus 21 ~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~ 51 (262)
T cd05058 21 GQKIHCAVKSLNRITDLEEVEQFLKEGIIMK 51 (262)
T ss_pred CceEEEEEEecCccCCHHHHHHHHHHHHHHc
No 477
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=33.80 E-value=68 Score=19.38 Aligned_cols=29 Identities=10% Similarity=0.004 Sum_probs=0.0
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHHHHhh
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCIERRK 82 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
+..+++++++++++.+++++...+..-++
T Consensus 17 W~~LVGVv~~al~~SlLIalaaKC~~~~k 45 (102)
T PF15176_consen 17 WPFLVGVVVTALVTSLLIALAAKCPVWYK 45 (102)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHhHHHHH
No 478
>PF09083 DUF1923: Domain of unknown function (DUF1923); InterPro: IPR015167 This domain is found in maltosyltransferases, adopting a secondary structure that consists of eight antiparallel beta-strands forming an open-sided 'jelly roll' Greek key beta-barrel. Their exact function is, as yet, unknown []. ; PDB: 1GJW_A 1GJU_A.
Probab=33.16 E-value=8.6 Score=20.21 Aligned_cols=17 Identities=29% Similarity=0.651 Sum_probs=0.0
Q ss_pred ceeeeEEcCCCCEEEEE
Q 042973 114 GSVYKGVLPDNTQIAVK 130 (152)
Q Consensus 114 g~Vy~g~~~~~~~vavK 130 (152)
|.||.|.|.+...|..|
T Consensus 39 grvw~g~w~~~e~vilk 55 (64)
T PF09083_consen 39 GRVWNGRWSDKERVILK 55 (64)
T ss_dssp EEEESSSEEEEEEEEE-
T ss_pred ceeecCcccccceEEec
No 479
>TIGR03521 GldG gliding-associated putative ABC transporter substrate-binding component GldG. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldG is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldG abolish the gliding phenotype. GldG, along with GldA and GldF are believed to compose an ABC transporter and are observed as an operon. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=33.08 E-value=52 Score=26.33 Aligned_cols=25 Identities=24% Similarity=0.224 Sum_probs=0.0
Q ss_pred ehhhhHHHHHHHHHHHHHHHHHHHh
Q 042973 57 VAVIGAVIFSVIVGILIFIGCIERR 81 (152)
Q Consensus 57 i~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
++.+++..++++++.+++|++||||
T Consensus 526 ~~~i~~pp~~~l~~G~~~~~~Rrr~ 550 (552)
T TIGR03521 526 LINIGLPILLLLLFGLSFTYIRKRK 550 (552)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
No 480
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=32.89 E-value=83 Score=21.55 Aligned_cols=37 Identities=24% Similarity=0.285 Sum_probs=0.0
Q ss_pred eeeEEcCCCCEEEEEecCCcchhHHHHHHHHHHhhhC
Q 042973 116 VYKGVLPDNTQIAVKKPKESDKIRINQEFQKEMGIVL 152 (152)
Q Consensus 116 Vy~g~~~~~~~vavK~l~~~~~~~~~~~f~~E~~~ls 152 (152)
+|...-..+..+|+|.++........++|.+|+.+|+
T Consensus 15 ~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~ 51 (257)
T cd05060 15 VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMA 51 (257)
T ss_pred EeeccCCCcceEEEEecccccchHHHHHHHHHHHHHH
No 481
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=32.40 E-value=33 Score=21.61 Aligned_cols=35 Identities=9% Similarity=-0.046 Sum_probs=0.0
Q ss_pred ceeeeehhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 042973 52 HITTIVAVIGAVIFSVIVGILIFIGCIERRKQKNF 86 (152)
Q Consensus 52 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (152)
.....++.....++++..++.|...+++|++++..
T Consensus 81 ~~~G~vlLs~GLmlL~~~alcW~~~~rkK~~kr~e 115 (129)
T PF15099_consen 81 SIFGPVLLSLGLMLLACSALCWKPIIRKKKKKRRE 115 (129)
T ss_pred hhehHHHHHHHHHHHHhhhheehhhhHhHHHHhhh
No 482
>PRK01741 cell division protein ZipA; Provisional
Probab=32.23 E-value=66 Score=23.97 Aligned_cols=30 Identities=20% Similarity=0.130 Sum_probs=0.0
Q ss_pred ehhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 042973 57 VAVIGAVIFSVIVGILIFIGCIERRKQKNF 86 (152)
Q Consensus 57 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (152)
++.++++++++++++..-+|-.||-|...+
T Consensus 5 ~iliILg~lal~~Lv~hgiWsnRrEKSqyF 34 (332)
T PRK01741 5 TILIILGILALVALVAHGIWSNRREKSQYF 34 (332)
T ss_pred ehHHHHHHHHHHHHHHhhhhhhhhHHHHhh
No 483
>PF07359 LEAP-2: Liver-expressed antimicrobial peptide 2 precursor (LEAP-2); InterPro: IPR009955 This family consists of several mammalian liver-expressed antimicrobial peptide 2 (LEAP-2) sequences. LEAP-2 is a cysteine-rich, and cationic protein. LEAP-2 contains a core structure with two disulphide bonds formed by cysteine residues in relative 1-3 and 2-4 positions. LEAP-2 is synthesised as a 77-residue precursor, which is predominantly expressed in the liver and highly conserved among mammals. The largest native LEAP-2 form of 40 amino acid residues is generated from the precursor at a putative cleavage site for a furin-like endoprotease. In contrast to smaller LEAP-2 variants, this peptide exhibits dose-dependent antimicrobial activity against selected microbial model organisms []. The exact function of this family is unclear.; GO: 0042742 defense response to bacterium; PDB: 2L1Q_A.
Probab=31.85 E-value=32 Score=19.52 Aligned_cols=23 Identities=26% Similarity=0.536 Sum_probs=0.0
Q ss_pred CCCC--CC--CcccccccCCCCCCC-Cccce
Q 042973 1 MSPY--AR--VTDIDECLDKEKYHC-EGKCK 26 (152)
Q Consensus 1 ~~~~--~~--C~~~~~C~~~~~~~c-~~~C~ 26 (152)
++.+ .| |+|+.||.... | .+.|.
T Consensus 44 ~~s~kP~GAsCrd~~EC~T~l---CR~~~CS 71 (77)
T PF07359_consen 44 GVSLKPIGASCRDNSECSTGL---CRKGHCS 71 (77)
T ss_dssp S-SSB-TTSB-SSGGGBTTS----EETTEE-
T ss_pred hhcCCcCcchhccchhhhHHH---hcCCccc
No 484
>PF07423 DUF1510: Protein of unknown function (DUF1510); InterPro: IPR009988 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown.
Probab=31.80 E-value=26 Score=24.36 Aligned_cols=22 Identities=18% Similarity=0.193 Sum_probs=0.0
Q ss_pred eeehhhhHHHHHHHHHHHHHHH
Q 042973 55 TIVAVIGAVIFSVIVGILIFIG 76 (152)
Q Consensus 55 ~ii~~~~~~~~~~~~~~~~~~~ 76 (152)
++-+++++++++++++++.+++
T Consensus 15 iLNiaI~IV~lLIiiva~~lf~ 36 (217)
T PF07423_consen 15 ILNIAIGIVSLLIIIVAYQLFF 36 (217)
T ss_pred hHHHHHHHHHHHHHHHhhhhee
No 485
>PF07406 NICE-3: NICE-3 protein; InterPro: IPR010876 This family consists of several eukaryotic NICE-3 and related proteins. The gene coding for NICE-3 is part of the epidermal differentiation complex (EDC), which comprises a large number of genes that are of crucial importance for the maturation of the human epidermis []. The function of NICE-3 is unknown.
Probab=31.58 E-value=85 Score=21.33 Aligned_cols=34 Identities=9% Similarity=0.032 Sum_probs=0.0
Q ss_pred ceeeeehhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 042973 52 HITTIVAVIGAVIFSVIVGILIFIGCIERRKQKN 85 (152)
Q Consensus 52 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
++.++.+.++.+..++++++++++..|+-.+.+.
T Consensus 7 ~lsGv~vvlv~a~g~l~~vllfIfaKRQI~Rf~l 40 (186)
T PF07406_consen 7 WLSGVNVVLVIAYGSLVFVLLFIFAKRQIMRFAL 40 (186)
T ss_pred cccceeeehhhHHHHHHHHHHHHHHHHHHHHHHH
No 486
>PF10883 DUF2681: Protein of unknown function (DUF2681); InterPro: IPR020274 This entry contains membrane proteins with no known function.
Probab=31.35 E-value=1.1e+02 Score=17.95 Aligned_cols=25 Identities=16% Similarity=0.170 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh
Q 042973 60 IGAVIFSVIVGILIFIGCIERRKQK 84 (152)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (152)
+++++.++++++.++++..++.++.
T Consensus 7 v~~~~~v~~~i~~y~~~k~~ka~~~ 31 (87)
T PF10883_consen 7 VGGVGAVVALILAYLWWKVKKAKKQ 31 (87)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
No 487
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=30.98 E-value=82 Score=17.57 Aligned_cols=31 Identities=10% Similarity=-0.026 Sum_probs=0.0
Q ss_pred eeehhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 042973 55 TIVAVIGAVIFSVIVGILIFIGCIERRKQKN 85 (152)
Q Consensus 55 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (152)
+.+++++.++++.++-.+.=++..+|+.++.
T Consensus 33 W~aIGvi~gi~~~~lt~ltN~YFK~k~drr~ 63 (68)
T PF04971_consen 33 WAAIGVIGGIFFGLLTYLTNLYFKIKEDRRK 63 (68)
T ss_pred chhHHHHHHHHHHHHHHHhHhhhhhhHhhhH
No 488
>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein).
Probab=30.73 E-value=36 Score=25.97 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=0.0
Q ss_pred eeeehhhhHHHHHHHHHHHHHHHHH
Q 042973 54 TTIVAVIGAVIFSVIVGILIFIGCI 78 (152)
Q Consensus 54 ~~ii~~~~~~~~~~~~~~~~~~~~~ 78 (152)
...|+++.+++++++..++.|+.|+
T Consensus 366 tgaIaGIsvavvvvVgglvGfLcWw 390 (397)
T PF03302_consen 366 TGAIAGISVAVVVVVGGLVGFLCWW 390 (397)
T ss_pred ccceeeeeehhHHHHHHHHHHHhhh
No 489
>PF11353 DUF3153: Protein of unknown function (DUF3153); InterPro: IPR021499 This family of proteins with unknown function appear to be restricted to Cyanobacteria. Some members are annotated as membrane proteins however this cannot be confirmed.
Probab=30.59 E-value=66 Score=22.07 Aligned_cols=24 Identities=13% Similarity=0.170 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHh
Q 042973 58 AVIGAVIFSVIVGILIFIGCIERR 81 (152)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
++++.+++++++++.+++.++|.+
T Consensus 185 lgiG~v~I~~l~~~~~~l~~~r~~ 208 (209)
T PF11353_consen 185 LGIGTVLIVLLILLGFLLRRRRLP 208 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcC
No 490
>smart00019 SF_P Pulmonary surfactant proteins. Pulmonary surfactant associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-C, a component of surfactant, is a highly hydrophobic peptide of 35 amino acid residues which is processed from a larger precursor protein. SP-C is post-translationally modified by the covalent attachment of two palmitoyl groups on two adjacent cysteines
Probab=30.41 E-value=1e+02 Score=20.07 Aligned_cols=66 Identities=20% Similarity=0.319 Sum_probs=0.0
Q ss_pred CCCCcCCCCCccCCc--ceeeeehhhhHHHHHHHHHHHHHHHHHHHhhhhhh----------hHhhhHHHHHHhhhCCCc
Q 042973 37 PIGMYGDGKVDCRGF--HITTIVAVIGAVIFSVIVGILIFIGCIERRKQKNF----------LKKWCAAKLVKATKNYDE 104 (152)
Q Consensus 37 ~~g~~~~~~~~c~~~--~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~ 104 (152)
+.|..+.+ |.+. +...|++.+.+.++++++.+++.-+.+..++.+.- .++..+.|..-.+..|+.
T Consensus 20 P~gr~~iP---ccp~~lKrLlivVvVvVlvVvVivGaLLMGLHMSQKHTEmvleMSi~~pe~qqrlal~e~~gttATFsI 96 (191)
T smart00019 20 PRGRFGIP---CCPVHLKRLLIVVVVVVLVVVVIVGALLMGLHMSQKHTEMVLEMSIGAPEAQQRLALSERAGTTATFSI 96 (191)
T ss_pred CCCcccCc---cccccceeEEEEEeeehhhHHHHHHHHHHhhhhhhhhHHHHHHhhhcCcHHhhhhhhhhhcCceEEEEc
Q ss_pred c
Q 042973 105 S 105 (152)
Q Consensus 105 ~ 105 (152)
.
T Consensus 97 g 97 (191)
T smart00019 97 G 97 (191)
T ss_pred C
No 491
>COG1288 Predicted membrane protein [Function unknown]
Probab=30.40 E-value=74 Score=24.89 Aligned_cols=46 Identities=7% Similarity=-0.015 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhHhhhHHHHHHhhhCCCccC
Q 042973 61 GAVIFSVIVGILIFIGCIERRKQKNFLKKWCAAKLVKATKNYDESH 106 (152)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 106 (152)
++..++..+..+++.+++.||-+++....+.+++.++..+.|...+
T Consensus 220 iv~~v~~~~~~i~y~~~Ya~KvkkdP~~S~v~~~~~e~r~~f~~~~ 265 (481)
T COG1288 220 IVVWVVFTLISIIYVYWYASKVKKDPTLSLVYEDDEEFRETFKVED 265 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccccccccchHHHHHHhhhcc
No 492
>PRK00665 petG cytochrome b6-f complex subunit PetG; Reviewed
Probab=30.23 E-value=73 Score=15.26 Aligned_cols=27 Identities=11% Similarity=0.114 Sum_probs=0.0
Q ss_pred eehhhhHHHHHHHHHHHHHHHHHHHhh
Q 042973 56 IVAVIGAVIFSVIVGILIFIGCIERRK 82 (152)
Q Consensus 56 ii~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
+..++..+++.+.++.+++-.+.+-|+
T Consensus 5 lL~GiVLGlipiTl~GlfvaAylQYrR 31 (37)
T PRK00665 5 LLCGIVLGLIPVTLAGLFVAAWNQYKR 31 (37)
T ss_pred hhhhHHHHhHHHHHHHHHHHHHHHHhc
No 493
>COG3197 FixS Uncharacterized protein, possibly involved in nitrogen fixation [Inorganic ion transport and metabolism]
Probab=30.07 E-value=88 Score=16.82 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=0.0
Q ss_pred eeeeehhhhHHHHHHHHHHHHH
Q 042973 53 ITTIVAVIGAVIFSVIVGILIF 74 (152)
Q Consensus 53 ~~~ii~~~~~~~~~~~~~~~~~ 74 (152)
.+.+.+++.+.+.++.+.++++
T Consensus 3 ~l~~Lipvsi~l~~v~l~~flW 24 (58)
T COG3197 3 ILYILIPVSILLGAVGLGAFLW 24 (58)
T ss_pred eeeeHHHHHHHHHHHHHHHHHH
No 494
>CHL00008 petG cytochrome b6/f complex subunit V
Probab=30.07 E-value=73 Score=15.25 Aligned_cols=27 Identities=11% Similarity=0.178 Sum_probs=0.0
Q ss_pred eehhhhHHHHHHHHHHHHHHHHHHHhh
Q 042973 56 IVAVIGAVIFSVIVGILIFIGCIERRK 82 (152)
Q Consensus 56 ii~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
+..++..+++.+.++.+++-.+.+-|+
T Consensus 5 lL~GiVLGlipvTl~GlfvaAylQYrR 31 (37)
T CHL00008 5 LLFGIVLGLIPITLAGLFVTAYLQYRR 31 (37)
T ss_pred hhhhHHHHhHHHHHHHHHHHHHHHHhh
No 495
>PF03908 Sec20: Sec20; InterPro: IPR005606 Sec20 is a membrane glycoprotein associated with secretory pathway.
Probab=30.04 E-value=69 Score=18.72 Aligned_cols=21 Identities=10% Similarity=0.015 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHH
Q 042973 58 AVIGAVIFSVIVGILIFIGCI 78 (152)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~ 78 (152)
+.+..++++++++++|++++|
T Consensus 71 ~li~~~~~~f~~~v~yI~~rR 91 (92)
T PF03908_consen 71 ILIFFAFLFFLLVVLYILWRR 91 (92)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
No 496
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=29.88 E-value=71 Score=21.81 Aligned_cols=26 Identities=31% Similarity=0.318 Sum_probs=0.0
Q ss_pred EEEEEecCCcch-hHHHHHHHHHHhhhC
Q 042973 126 QIAVKKPKESDK-IRINQEFQKEMGIVL 152 (152)
Q Consensus 126 ~vavK~l~~~~~-~~~~~~f~~E~~~ls 152 (152)
.||+|.++.... ... ++|.+|+.+|+
T Consensus 25 ~vaiK~~~~~~~~~~~-~~~~~e~~~l~ 51 (257)
T cd05040 25 PVAVKCLKSDKLSDIM-DDFLKEAAIMH 51 (257)
T ss_pred EEEEeecCCcccHHHH-HHHHHHHHHHh
No 497
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=29.72 E-value=93 Score=20.28 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 042973 58 AVIGAVIFSVIVGILIFIGCIERRKQKNF 86 (152)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (152)
+..++.++++++++++++.+.|.|....+
T Consensus 18 ~~~~~i~~ll~~l~~~~~~Y~r~r~~tKy 46 (149)
T PF11694_consen 18 LRYILIIILLLVLIFFFIKYLRNRLDTKY 46 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcchh
No 498
>PF13974 YebO: YebO-like protein
Probab=29.49 E-value=1.2e+02 Score=17.53 Aligned_cols=37 Identities=14% Similarity=-0.012 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhHhhhHHHHHH
Q 042973 61 GAVIFSVIVGILIFIGCIERRKQKNFLKKWCAAKLVK 97 (152)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 97 (152)
++..++++++.+++|++..|...+..-+.--++++..
T Consensus 1 l~~~~~~~lv~livWFFVnRaSvRANEQI~LL~~ile 37 (80)
T PF13974_consen 1 LVVSVLVLLVGLIVWFFVNRASVRANEQIELLEEILE 37 (80)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
No 499
>PF14654 Epiglycanin_C: Mucin, catalytic, TM and cytoplasmic tail region
Probab=29.46 E-value=75 Score=19.08 Aligned_cols=25 Identities=12% Similarity=0.115 Sum_probs=0.0
Q ss_pred eehhhhHHHHHHHHHHHHHHHHHHH
Q 042973 56 IVAVIGAVIFSVIVGILIFIGCIER 80 (152)
Q Consensus 56 ii~~~~~~~~~~~~~~~~~~~~~~~ 80 (152)
|++..++.+++.+-+.+.++++.|+
T Consensus 20 IfLItLasVvvavGl~aGLfFcvR~ 44 (106)
T PF14654_consen 20 IFLITLASVVVAVGLFAGLFFCVRN 44 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
No 500
>PF10661 EssA: WXG100 protein secretion system (Wss), protein EssA; InterPro: IPR018920 The Wss (WXG100 protein secretion system) in Staphylococcus aureus seems to be encoded by a locus of eight ORFs, called ess (eSAT-6 secretion system) []. This locus encodes, amongst several other proteins, EssA, a protein predicted to possess one transmembrane domain. Due to its predicted membrane location and its absolute requirement for WXG100 protein secretion, it has been speculated that EssA could form a secretion apparatus in conjunction with YukC and YukAB. Proteins homologous to EssA, YukC, EsaA and YukD were absent from mycobacteria []. Members of this family are associated with type VII secretion of WXG100 family targets in the Firmicutes, but not in the Actinobacteria. This highly divergent protein family consists largely of a central region of highly polar low-complexity sequence containing occasional LF motifs in weak repeats about 17 residues in length, flanked by hydrophobic N- and C-terminal regions.
Probab=29.40 E-value=59 Score=21.06 Aligned_cols=30 Identities=13% Similarity=0.009 Sum_probs=0.0
Q ss_pred CCcceeeeehhhhHHHHHHHHHHHHHHHHH
Q 042973 49 RGFHITTIVAVIGAVIFSVIVGILIFIGCI 78 (152)
Q Consensus 49 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 78 (152)
...++..+++++++++++++..++...+|.
T Consensus 113 ~~~~~~~~i~~~i~g~ll~i~~giy~~~r~ 142 (145)
T PF10661_consen 113 TKKPISPTILLSIGGILLAICGGIYVVLRK 142 (145)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHH
Done!