Query 042976
Match_columns 163
No_of_seqs 165 out of 1367
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 20:14:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042976.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042976hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 99.9 1.8E-24 6.2E-29 154.2 12.8 88 9-101 1-99 (100)
2 4fei_A Heat shock protein-rela 99.9 7.4E-24 2.5E-28 152.2 12.6 89 9-102 3-97 (102)
3 4eld_A MJ16.5-P1, small heat s 99.9 1.7E-23 6E-28 161.3 11.7 94 11-110 56-161 (161)
4 1gme_A Heat shock protein 16.9 99.9 7.5E-23 2.6E-27 156.7 11.2 97 11-111 42-149 (151)
5 3l1e_A Alpha-crystallin A chai 99.9 1.6E-22 5.4E-27 146.6 12.3 93 13-110 3-105 (106)
6 2wj5_A Heat shock protein beta 99.9 1.8E-22 6E-27 145.1 11.3 93 14-111 3-100 (101)
7 3aab_A Putative uncharacterize 99.9 2.8E-22 9.7E-27 148.2 10.4 86 11-102 23-118 (123)
8 3q9p_A Heat shock protein beta 99.9 2E-21 6.8E-26 135.5 11.2 78 17-99 2-84 (85)
9 2y1y_A Alpha-crystallin B chai 99.8 1.9E-20 6.4E-25 131.7 10.2 82 19-105 3-89 (90)
10 2klr_A Alpha-crystallin B chai 99.8 9.3E-21 3.2E-25 148.7 9.2 92 15-111 66-163 (175)
11 2bol_A TSP36, small heat shock 99.8 1.8E-19 6.3E-24 152.7 13.8 96 10-111 96-199 (314)
12 2bol_A TSP36, small heat shock 99.7 2.2E-17 7.7E-22 139.8 8.9 80 15-99 223-313 (314)
13 1rl1_A Suppressor of G2 allele 99.0 7.8E-10 2.7E-14 79.8 8.6 84 9-101 6-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.0 6.3E-10 2.2E-14 77.0 7.6 81 12-101 2-82 (92)
15 2k8q_A Protein SHQ1; beta-sand 98.3 1.9E-06 6.5E-11 64.7 6.6 78 11-102 2-84 (134)
16 3eud_A Protein SHQ1; CS domain 98.2 2.2E-05 7.5E-10 57.3 11.2 78 11-102 16-98 (115)
17 3igf_A ALL4481 protein; two-do 98.1 5.5E-06 1.9E-10 71.3 8.0 62 23-98 306-368 (374)
18 1x5m_A Calcyclin-binding prote 98.0 0.00013 4.3E-09 53.5 11.6 81 12-101 20-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 97.8 0.00011 3.8E-09 54.7 8.9 85 12-101 19-112 (134)
20 1wgv_A KIAA1068 protein; CS do 97.8 0.00028 9.6E-09 51.4 10.8 79 13-100 20-101 (124)
21 2rh0_A NUDC domain-containing 97.7 0.00037 1.3E-08 53.1 10.3 86 3-101 4-91 (157)
22 2o30_A Nuclear movement protei 97.7 0.00039 1.3E-08 51.1 9.9 75 12-99 4-79 (131)
23 1ejf_A Progesterone receptor P 97.6 0.00037 1.3E-08 50.8 9.0 79 13-101 4-82 (125)
24 3qor_A Nuclear migration prote 97.6 0.00063 2.2E-08 49.4 9.9 78 12-101 16-97 (121)
25 1wfi_A Nuclear distribution ge 97.6 0.00021 7.2E-09 52.5 7.2 78 12-101 7-88 (131)
26 2cg9_X CO-chaperone protein SB 97.2 0.00017 5.8E-09 53.5 2.9 83 11-100 5-97 (134)
27 2kmw_A Uncharacterized protein 97.1 0.0013 4.4E-08 49.7 6.8 79 12-101 4-82 (150)
28 3q9p_A Heat shock protein beta 71.5 9.8 0.00034 25.0 5.5 34 66-100 7-40 (85)
29 2y1y_A Alpha-crystallin B chai 69.4 9.3 0.00032 25.3 5.1 33 66-99 6-38 (90)
30 2wj5_A Heat shock protein beta 66.6 11 0.00038 25.6 5.1 33 66-99 11-43 (101)
31 2cql_A OK/SW-CL.103, 60S ribos 66.3 11 0.00036 26.2 4.9 46 39-98 20-68 (100)
32 4eld_A MJ16.5-P1, small heat s 66.0 34 0.0012 25.0 8.0 33 67-100 67-99 (161)
33 3gla_A Low molecular weight he 65.9 14 0.00048 24.6 5.4 34 66-100 14-47 (100)
34 4fei_A Heat shock protein-rela 63.7 30 0.001 23.2 7.3 33 27-60 62-95 (102)
35 3l1e_A Alpha-crystallin A chai 63.4 14 0.00048 25.3 5.1 32 66-98 12-43 (106)
36 1rl6_A Protein (ribosomal prot 63.3 16 0.00055 27.9 5.9 45 39-98 11-55 (177)
37 1nkw_E 50S ribosomal protein L 60.9 20 0.0007 28.2 6.2 47 38-99 38-84 (212)
38 3aab_A Putative uncharacterize 58.7 25 0.00086 24.4 5.9 34 67-101 35-69 (123)
39 3j21_F 50S ribosomal protein L 57.7 15 0.00051 28.3 4.8 45 39-97 14-58 (184)
40 1vq8_E 50S ribosomal protein L 57.3 21 0.00073 27.2 5.6 46 39-98 9-54 (178)
41 3v2d_H 50S ribosomal protein L 49.3 31 0.0011 26.3 5.4 44 39-97 12-55 (180)
42 3iz5_F 60S ribosomal protein L 48.0 39 0.0013 26.0 5.8 46 39-98 13-60 (190)
43 2klr_A Alpha-crystallin B chai 46.4 27 0.00093 26.3 4.6 34 65-99 72-105 (175)
44 3u5e_H L8, RP24, YL11, 60S rib 44.9 46 0.0016 25.6 5.8 47 38-98 12-59 (191)
45 1gme_A Heat shock protein 16.9 44.7 46 0.0016 24.1 5.6 33 67-100 54-87 (151)
46 4a17_E RPL9, 60S ribosomal pro 39.9 26 0.00089 26.9 3.6 51 32-97 6-58 (188)
47 2zkr_e 60S ribosomal protein L 37.8 44 0.0015 25.7 4.7 53 32-98 6-61 (192)
48 3bbo_I Ribosomal protein L6; l 35.8 12 0.00041 29.7 1.1 48 38-99 53-100 (223)
49 2nwt_A UPF0165 protein AF_2212 32.8 31 0.0011 22.5 2.6 32 81-113 3-34 (69)
50 1q5l_A Chaperone protein DNAK; 32.7 1E+02 0.0034 21.8 5.7 30 82-111 99-131 (135)
51 1ew4_A CYAY protein; friedreic 32.7 28 0.00094 24.3 2.5 15 83-97 30-44 (106)
52 2gjh_A Designed protein; oblig 30.3 38 0.0013 20.9 2.5 22 38-60 31-52 (62)
53 3oeq_A Frataxin homolog, mitoc 29.2 43 0.0015 24.1 3.1 16 83-98 49-64 (123)
54 3h0x_A 78 kDa glucose-regulate 28.9 1.6E+02 0.0055 21.2 6.3 32 81-112 81-115 (152)
55 3r8s_G 50S ribosomal protein L 28.6 24 0.00081 26.8 1.7 44 39-97 11-54 (176)
56 2o30_A Nuclear movement protei 28.1 79 0.0027 22.2 4.4 29 68-96 16-44 (131)
57 3dqg_A Heat shock 70 kDa prote 27.4 1.7E+02 0.006 21.0 6.5 31 81-111 81-114 (151)
58 3dob_A Heat shock 70 kDa prote 25.8 1.6E+02 0.0054 21.3 5.8 31 81-111 81-114 (152)
59 2ks0_A Uncharacterized protein 25.4 37 0.0013 22.1 2.0 23 36-59 17-39 (71)
60 2op6_A Heat shock 70 kDa prote 23.1 1.8E+02 0.0062 20.5 5.7 30 82-111 82-114 (152)
61 1n91_A ORF, hypothetical prote 22.8 1.5E+02 0.005 20.7 4.8 36 17-58 8-44 (108)
62 2rl0_A Fibronectin; 4F15F1, be 22.7 26 0.00088 24.0 0.8 11 148-158 56-66 (89)
63 4e81_A Chaperone protein DNAK; 21.5 2.1E+02 0.0071 21.9 6.0 46 65-111 66-115 (219)
64 4b7l_A Filamin-B; structural p 21.3 2.9E+02 0.01 22.6 7.3 57 32-89 279-335 (347)
65 2uwa_A Cellulase; glycoside hy 21.2 92 0.0031 24.9 4.0 37 38-77 31-74 (274)
66 3t3l_A Frataxin, mitochondrial 20.9 65 0.0022 23.2 2.7 17 81-97 40-56 (129)
67 1zo0_A ODC-AZ, ornithine decar 20.1 2.5E+02 0.0085 20.1 7.0 51 48-100 4-54 (126)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.92 E-value=1.8e-24 Score=154.18 Aligned_cols=88 Identities=32% Similarity=0.558 Sum_probs=80.4
Q ss_pred CCCCCccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeecc-----------CCceeeEEEEEECCCC
Q 042976 9 ADFEPRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPID-----------ENNVESFSKRIEVPKD 77 (163)
Q Consensus 9 ~~~~P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~-----------~~~~g~F~r~~~LP~~ 77 (163)
++|.|++||.++++.|+|. ++|||++++||+|++. ++.|+|+|++... ++.+|+|.|+|.||.+
T Consensus 1 ~~~~P~~di~e~~~~~~v~----~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~ 75 (100)
T 3gla_A 1 AQWVPRVDIKEEVNHFVLY----ADLPGIDPSQIEVQMD-KGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDS 75 (100)
T ss_dssp CCSCCCEEEEECSSEEEEE----EECTTSCGGGCEEEEE-TTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTT
T ss_pred CCccCcEEEEECCCEEEEE----EECCCCCHHHEEEEEE-CCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCC
Confidence 4689999999999999999 9999999999999999 9999999998754 2357899999999999
Q ss_pred CCcCceEEEEeCCEEEEEeeccCC
Q 042976 78 CKSDRIKAKLSNGILRLTMPKKTH 101 (163)
Q Consensus 78 vd~~~i~A~~~nGvL~I~~PK~~~ 101 (163)
+|.+.|+|+|+||+|+|++||.++
T Consensus 76 vd~~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 76 ADADGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp BCTTSCEEEEETTEEEEEEEBC--
T ss_pred cChHHeEEEEeCCEEEEEEecCCC
Confidence 999999999999999999999764
No 2
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.91 E-value=7.4e-24 Score=152.18 Aligned_cols=89 Identities=22% Similarity=0.422 Sum_probs=82.1
Q ss_pred CCCCCccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccC------CceeeEEEEEECCCCCCcCc
Q 042976 9 ADFEPRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDE------NNVESFSKRIEVPKDCKSDR 82 (163)
Q Consensus 9 ~~~~P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~------~~~g~F~r~~~LP~~vd~~~ 82 (163)
..|.|++||.++++.|+|. ++|||++++||+|+++ ++.|+|+|+++... +.+|+|.|+|.||.++|.+.
T Consensus 3 g~~~P~~di~e~~~~~~v~----~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~ 77 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLL----LDVPGVDAGTLALAED-GGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPAS 77 (102)
T ss_dssp EECCCCEEEEEETTEEEEE----EECTTCCGGGCEEEEE-TTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTC
T ss_pred CcccCcEEEEEcCCEEEEE----EECCCCchHhEEEEEE-CCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhH
Confidence 4688999999999999999 9999999999999999 99999999996542 35789999999999999999
Q ss_pred eEEEEeCCEEEEEeeccCCC
Q 042976 83 IKAKLSNGILRLTMPKKTHS 102 (163)
Q Consensus 83 i~A~~~nGvL~I~~PK~~~~ 102 (163)
++|+|+||+|+|++||..+.
T Consensus 78 i~A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 78 GVASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp CEEEEETTEEEEEEEBSSCC
T ss_pred cEEEEECCEEEEEEEccCcc
Confidence 99999999999999997654
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.90 E-value=1.7e-23 Score=161.31 Aligned_cols=94 Identities=23% Similarity=0.317 Sum_probs=85.1
Q ss_pred CCCccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeecc-----------CC-ceeeEEEEEECCCCC
Q 042976 11 FEPRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPID-----------EN-NVESFSKRIEVPKDC 78 (163)
Q Consensus 11 ~~P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~-----------~~-~~g~F~r~~~LP~~v 78 (163)
|.| +||.+++++|+|. ++|||++++||+|+++ ++.|+|+|++... ++ .+|+|.|+|.||.+|
T Consensus 56 ~~p-vdi~e~~~~~~v~----~dlPG~~~edi~V~~~-~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~v 129 (161)
T 4eld_A 56 FMP-ISIIEGDQHIKVI----AWLPGVNKEDIILNAV-GDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATV 129 (161)
T ss_dssp CCC-EEEEECSSEEEEE----EECTTCCGGGEEEEEE-TTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCB
T ss_pred ccc-eeEEEeCCEEEEE----EECCCCChHhEEEEEE-CCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCc
Confidence 445 9999999999999 9999999999999999 9999999999763 23 578999999999999
Q ss_pred CcCceEEEEeCCEEEEEeeccCCCCceeeeee
Q 042976 79 KSDRIKAKLSNGILRLTMPKKTHSHVTRNQAA 110 (163)
Q Consensus 79 d~~~i~A~~~nGvL~I~~PK~~~~~~~~i~I~ 110 (163)
|.+.|+|+|+||+|+|++||.+..++++|+|+
T Consensus 130 d~~~i~A~~~nGvL~I~lpK~~~~~~r~I~Ie 161 (161)
T 4eld_A 130 KEENASAKFENGVLSVILPKAESSIKKGINIE 161 (161)
T ss_dssp CGGGCEEEEETTEEEEEEEBCGGGSCCCCCCC
T ss_pred ccccEEEEEECCEEEEEEEcCCCCCCcEeecC
Confidence 99999999999999999999887777777764
No 4
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.89 E-value=7.5e-23 Score=156.71 Aligned_cols=97 Identities=26% Similarity=0.459 Sum_probs=85.0
Q ss_pred CCCccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccC-----------CceeeEEEEEECCCCCC
Q 042976 11 FEPRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDE-----------NNVESFSKRIEVPKDCK 79 (163)
Q Consensus 11 ~~P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~-----------~~~g~F~r~~~LP~~vd 79 (163)
+.|++||.+++++|+|. ++|||++++||+|.+.+++.|+|+|++.... +.+|+|.|+|.||.++|
T Consensus 42 ~~p~~di~e~~d~~~v~----~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd 117 (151)
T 1gme_A 42 ANARMDWKETPEAHVFK----ADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAK 117 (151)
T ss_dssp GGGCEEEEECSSEEEEE----EECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCC
T ss_pred cCCceEEEEcCCEEEEE----EECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcc
Confidence 45899999999999999 9999999999999995268999999987542 24689999999999999
Q ss_pred cCceEEEEeCCEEEEEeeccCCCCceeeeeec
Q 042976 80 SDRIKAKLSNGILRLTMPKKTHSHVTRNQAAA 111 (163)
Q Consensus 80 ~~~i~A~~~nGvL~I~~PK~~~~~~~~i~I~~ 111 (163)
.+.|+|+|+||+|+|++||..+.+++.+.|++
T Consensus 118 ~~~i~A~~~nGvL~I~lPK~~~~~~~~~~I~I 149 (151)
T 1gme_A 118 VEEVKAGLENGVLTVTVPKAEVKKPEVKAIQI 149 (151)
T ss_dssp GGGCEEEEETTEEEEEEECCCCCTTCCCCCCC
T ss_pred ccceEEEEECCEEEEEEEccCcCCCCCeEeee
Confidence 99999999999999999998876665555554
No 5
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.89 E-value=1.6e-22 Score=146.56 Aligned_cols=93 Identities=18% Similarity=0.331 Sum_probs=80.4
Q ss_pred CccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCC----ceeeEEEEEECCCCCCcCceEEEE-
Q 042976 13 PRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDEN----NVESFSKRIEVPKDCKSDRIKAKL- 87 (163)
Q Consensus 13 P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~----~~g~F~r~~~LP~~vd~~~i~A~~- 87 (163)
+..+|.++++.|.|. ++||||+++||+|+++ ++.|+|+|++..... ..++|.|+|.||.+||.+.|+|+|
T Consensus 3 g~~~i~e~~~~~~v~----~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s 77 (106)
T 3l1e_A 3 GISEVRSDRDKFVIF----LDVKHFSPEDLTVKVQ-EDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLS 77 (106)
T ss_dssp CSEEEEECSSEEEEE----EECTTSCGGGEEEEEE-TTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEEC
T ss_pred CceEEEEcCCEEEEE----EECCCCChHHEEEEEE-CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEEC
Confidence 457899999999999 9999999999999999 999999999864322 236799999999999999999999
Q ss_pred eCCEEEEEeeccCCC-----Cceeeeee
Q 042976 88 SNGILRLTMPKKTHS-----HVTRNQAA 110 (163)
Q Consensus 88 ~nGvL~I~~PK~~~~-----~~~~i~I~ 110 (163)
+||+|+|++||..+. ++++|+|+
T Consensus 78 ~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 78 ADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp TTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred CCCEEEEEEEccCcccccCCCCeEeeec
Confidence 799999999998765 45555553
No 6
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.88 E-value=1.8e-22 Score=145.07 Aligned_cols=93 Identities=15% Similarity=0.247 Sum_probs=80.8
Q ss_pred ccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCC----ceeeEEEEEECCCCCCcCceEEEE-e
Q 042976 14 RCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDEN----NVESFSKRIEVPKDCKSDRIKAKL-S 88 (163)
Q Consensus 14 ~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~----~~g~F~r~~~LP~~vd~~~i~A~~-~ 88 (163)
.+||.++++.|.|. ++||||+++||+|++. ++.|+|+|+++...+ ..+.|.|+|.||.+||.+.|+|+| .
T Consensus 3 ~vdi~e~~~~~~v~----~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~ 77 (101)
T 2wj5_A 3 MAQVPTDPGYFSVL----LDVKHFSPEEISVKVV-GDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSP 77 (101)
T ss_dssp CCCCCCCSSCEEEE----EECTTSCGGGEEEEEE-TTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECT
T ss_pred cEEEEEeCCEEEEE----EECCCCcHHHeEEEEE-CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECC
Confidence 57999999999999 9999999999999999 999999999976432 235699999999999999999999 7
Q ss_pred CCEEEEEeeccCCCCceeeeeec
Q 042976 89 NGILRLTMPKKTHSHVTRNQAAA 111 (163)
Q Consensus 89 nGvL~I~~PK~~~~~~~~i~I~~ 111 (163)
||+|+|++||....++++++|..
T Consensus 78 nGvL~I~lPK~~~~~~~~~~i~~ 100 (101)
T 2wj5_A 78 EGVLSIQATPASAQASLPSPPAA 100 (101)
T ss_dssp TSEEEEEECBCCCCCSSCC----
T ss_pred CCEEEEEEECCCcCCCCCCcccc
Confidence 99999999999888887777753
No 7
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.87 E-value=2.8e-22 Score=148.19 Aligned_cols=86 Identities=26% Similarity=0.373 Sum_probs=78.2
Q ss_pred CCCccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeC-CEEEEEEEeeccC--------CceeeEEEEEECCCCCCcC
Q 042976 11 FEPRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQ-GKLRISGKRPIDE--------NNVESFSKRIEVPKDCKSD 81 (163)
Q Consensus 11 ~~P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~-~~L~I~g~~~~~~--------~~~g~F~r~~~LP~~vd~~ 81 (163)
+.|++||.+++++|.|. ++|||++++||+|++. + +.|+|+|++.... +.+ +|.|+|.||.++|.+
T Consensus 23 ~~P~~di~e~~~~~~v~----~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~vd~~ 96 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVV----ADLAGFNKEKIKARVS-GQNELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNVAKD 96 (123)
T ss_dssp HCSCEEEEEETTEEEEE----EECCSCCGGGCEEEEE-TTTEEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEECTT
T ss_pred CCCcEEEEEcCCEEEEE----EECCCCCHHHEEEEEe-CCCEEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCcCcc
Confidence 34999999999999999 9999999999999999 8 9999999987642 234 899999999999999
Q ss_pred ce-EEEEeCCEEEEEeeccCCC
Q 042976 82 RI-KAKLSNGILRLTMPKKTHS 102 (163)
Q Consensus 82 ~i-~A~~~nGvL~I~~PK~~~~ 102 (163)
+| +|+|+||+|+|++||....
T Consensus 97 ~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 97 AEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp CCCEEEEETTEEEEEEEGGGEE
T ss_pred hhCeeEEcCCEEEEEEEcCCCC
Confidence 99 9999999999999997654
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.86 E-value=2e-21 Score=135.54 Aligned_cols=78 Identities=21% Similarity=0.398 Sum_probs=69.0
Q ss_pred eEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCC----ceeeEEEEEECCCCCCcCceEEEEe-CCE
Q 042976 17 WRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDEN----NVESFSKRIEVPKDCKSDRIKAKLS-NGI 91 (163)
Q Consensus 17 i~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~----~~g~F~r~~~LP~~vd~~~i~A~~~-nGv 91 (163)
+.++++.|.|. ++||||+++||+|++. ++.|+|+|++..... .+++|.|+|.||.+||.+.|+|+|. ||+
T Consensus 2 ~~E~~~~~~v~----~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~Gv 76 (85)
T 3q9p_A 2 GSHTADRWRVS----LDVNHFAPDELTVKTK-DGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGT 76 (85)
T ss_dssp -CCCCCEEEEE----EECTTTCCSEEEEEEE-TTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSE
T ss_pred ccCcCCEEEEE----EECCCCChHHEEEEEE-CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCE
Confidence 35788999999 9999999999999999 999999999875432 3589999999999999999999998 999
Q ss_pred EEEEeecc
Q 042976 92 LRLTMPKK 99 (163)
Q Consensus 92 L~I~~PK~ 99 (163)
|+|++||.
T Consensus 77 L~I~lPK~ 84 (85)
T 3q9p_A 77 LTVEAPMP 84 (85)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999995
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.83 E-value=1.9e-20 Score=131.67 Aligned_cols=82 Identities=22% Similarity=0.397 Sum_probs=66.6
Q ss_pred EcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCC----ceeeEEEEEECCCCCCcCceEEEE-eCCEEE
Q 042976 19 REEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDEN----NVESFSKRIEVPKDCKSDRIKAKL-SNGILR 93 (163)
Q Consensus 19 e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~----~~g~F~r~~~LP~~vd~~~i~A~~-~nGvL~ 93 (163)
++++.|.|. ++||||+++||+|.+. ++.|+|+|++..... ..+.|.|+|.||.+||.+.|+|+| +||+|+
T Consensus 3 ~~~~~~~v~----~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~ 77 (90)
T 2y1y_A 3 MEKDRFSVN----LDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLT 77 (90)
T ss_dssp ---CCEEEE----EECTTSCGGGEEEEEE-TTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEE
T ss_pred cCCCEEEEE----EECCCCcHHHeEEEEE-CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEE
Confidence 567899999 9999999999999999 999999999875321 235799999999999999999999 799999
Q ss_pred EEeeccCCCCce
Q 042976 94 LTMPKKTHSHVT 105 (163)
Q Consensus 94 I~~PK~~~~~~~ 105 (163)
|++||....+++
T Consensus 78 I~~pK~~~~~p~ 89 (90)
T 2y1y_A 78 VNGPRKQVSGPE 89 (90)
T ss_dssp EEECBC------
T ss_pred EEEEcCCCCCCC
Confidence 999998766554
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.83 E-value=9.3e-21 Score=148.67 Aligned_cols=92 Identities=22% Similarity=0.357 Sum_probs=70.6
Q ss_pred cceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCC----ceeeEEEEEECCCCCCcCceEEEE-eC
Q 042976 15 CRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDEN----NVESFSKRIEVPKDCKSDRIKAKL-SN 89 (163)
Q Consensus 15 ~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~----~~g~F~r~~~LP~~vd~~~i~A~~-~n 89 (163)
+||.++++.|.|. ++||||+++||+|++. ++.|+|+|+++...+ ..+.|.|+|.||.+||.++|+|+| +|
T Consensus 66 ~dv~e~~d~~~v~----~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~d 140 (175)
T 2klr_A 66 SEMRLEKDRFSVN----LDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSD 140 (175)
T ss_dssp ---CCCCSEEEEE----ECCSSCCGGGEEEEEE-TTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTT
T ss_pred eEEEEcCCeEEEE----EECCCCChHHEEEEEE-CCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCC
Confidence 6899999999999 9999999999999999 999999999875432 135799999999999999999999 69
Q ss_pred CEEEEEeeccCCCC-ceeeeeec
Q 042976 90 GILRLTMPKKTHSH-VTRNQAAA 111 (163)
Q Consensus 90 GvL~I~~PK~~~~~-~~~i~I~~ 111 (163)
|+|+|++||..... .++|+|+.
T Consensus 141 GvL~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 141 GVLTVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp SCEEEEEECC-------------
T ss_pred CEEEEEEECCCCCCCCeEEEEec
Confidence 99999999976543 36676665
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.81 E-value=1.8e-19 Score=152.67 Aligned_cols=96 Identities=16% Similarity=0.291 Sum_probs=84.7
Q ss_pred CCCCccceEEcCC----EEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccC---CceeeEEEEEECCCCCCcCc
Q 042976 10 DFEPRCRWRREEH----QFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDE---NNVESFSKRIEVPKDCKSDR 82 (163)
Q Consensus 10 ~~~P~~di~e~~~----~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~---~~~g~F~r~~~LP~~vd~~~ 82 (163)
.+.|++|+.++++ +|.|. ++||||+++||+|++. ++.|+|+|+++... ..+|+|.|+|.||.+||.+.
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~----~dlPG~~~edI~V~v~-~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~ 170 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVY----FNVKNFKAEEITIKAD-KNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNH 170 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEE----EECTTCCTTTEEEEEE-TTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGG
T ss_pred cCCCccceEEcCCCCceEEEEE----EECCCCchHHeEEEEE-CCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccc
Confidence 4669999999998 99999 9999999999999999 99999999997542 35789999999999999999
Q ss_pred eEEEEe-CCEEEEEeeccCCCCceeeeeec
Q 042976 83 IKAKLS-NGILRLTMPKKTHSHVTRNQAAA 111 (163)
Q Consensus 83 i~A~~~-nGvL~I~~PK~~~~~~~~i~I~~ 111 (163)
|+|+|+ ||||+|++||..+.. +.|.|..
T Consensus 171 i~A~~~~nGVL~I~lPK~~~~~-~~I~it~ 199 (314)
T 2bol_A 171 IQATITTDDVLVIEAPVNEPNY-KAIKLSP 199 (314)
T ss_dssp CEEEECSSSEEEEEEEBSSCCT-TTEEEET
T ss_pred cEEEEeCCCEEEEEEeccCccc-ceeeccc
Confidence 999999 999999999987653 4465543
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.70 E-value=2.2e-17 Score=139.85 Aligned_cols=80 Identities=16% Similarity=0.309 Sum_probs=68.2
Q ss_pred cceEEcC---CEEEEEEeeEEEc-CCCCCCCEEEEEEeCCEEEEEEEeecc-------CCceeeEEEEEECCCCCCcCce
Q 042976 15 CRWRREE---HQFMLSFSYYYMV-VGFKKDQIRVFVNDQGKLRISGKRPID-------ENNVESFSKRIEVPKDCKSDRI 83 (163)
Q Consensus 15 ~di~e~~---~~y~l~f~v~~dl-PG~~~edi~V~v~~~~~L~I~g~~~~~-------~~~~g~F~r~~~LP~~vd~~~i 83 (163)
.++.+++ +.|.|. ++| |||+|+||+|+++ ++.|+|+|+++.. ++.+|.|.|+|.||.+||+++|
T Consensus 223 ~~i~e~~~~~~~~~v~----~~ldPG~~~edi~V~v~-~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i 297 (314)
T 2bol_A 223 LEIVTAEDGSKKIHLE----LKVDPHFAPKDVKVWAK-GNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKT 297 (314)
T ss_dssp EEEEECTTSCEEEEEE----EECCTTCCGGGEEEEES-SSEEEEEEEEC------------CEEEEEEEECSSEECGGGC
T ss_pred CcEEEecCCCcEEEEE----EEcCCCCChHHeEEEEE-CCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHe
Confidence 4566655 566666 888 9999999999999 9999999999765 3468999999999999999999
Q ss_pred EEEEeCCEEEEEeecc
Q 042976 84 KAKLSNGILRLTMPKK 99 (163)
Q Consensus 84 ~A~~~nGvL~I~~PK~ 99 (163)
+|+|+||||+|++||.
T Consensus 298 ~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 298 QAEIVDGLMVVEAPLF 313 (314)
T ss_dssp EEEEETTEEEEEEEEE
T ss_pred EEEEeCCEEEEEEecC
Confidence 9999999999999985
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.05 E-value=7.8e-10 Score=79.75 Aligned_cols=84 Identities=15% Similarity=0.275 Sum_probs=73.7
Q ss_pred CCCCCccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEe
Q 042976 9 ADFEPRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLS 88 (163)
Q Consensus 9 ~~~~P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~ 88 (163)
....|+++|.++++.+.|. +.+||+.++++.|.+. ++.|.|++.... ...|...+.|+..|+++..++++.
T Consensus 6 ~~~~~~~~W~Qt~~~V~v~----i~l~~v~~~~v~v~~~-~~~l~v~~~~~~----~~~y~~~~~L~~~I~~e~s~~~~~ 76 (114)
T 1rl1_A 6 HQSKIKYDWYQTESQVVIT----LMIKNVQKNDVNVEFS-EKELSALVKLPS----GEDYNLKLELLHPIIPEQSTFKVL 76 (114)
T ss_dssp --CCCCEEEEECSSEEEEE----ECCCSCCGGGEEEECS-SSCEEEEEECTT----SSEEEEEECBSSCCCGGGEEEEEC
T ss_pred CCCCCCccEEeCCCEEEEE----EEeCCCCHHHCEEEEE-cCEEEEEEEeCC----CcEEEEEeeCCCcCCccccEEEEE
Confidence 3456889999999999999 9999999999999999 899999987531 246999999999999999999999
Q ss_pred CCEEEEEeeccCC
Q 042976 89 NGILRLTMPKKTH 101 (163)
Q Consensus 89 nGvL~I~~PK~~~ 101 (163)
+|.|.|+|+|..+
T Consensus 77 ~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 77 STKIEIKLKKPEA 89 (114)
T ss_dssp SSSEEEEEECSSC
T ss_pred CCEEEEEEEcCCC
Confidence 9999999999754
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.04 E-value=6.3e-10 Score=76.96 Aligned_cols=81 Identities=10% Similarity=0.191 Sum_probs=72.5
Q ss_pred CCccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCE
Q 042976 12 EPRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGI 91 (163)
Q Consensus 12 ~P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGv 91 (163)
.|+++|.++++...|. +.+||+.++++.|.+. ++.|.|.+... ....|...+.|+..|+++..++++.+|.
T Consensus 2 ~~~~~W~Qt~~~V~v~----i~~~~v~~~~v~v~~~-~~~l~v~~~~~----~~~~y~~~~~L~~~I~~~~s~~~~~~~~ 72 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVT----VFAKGIPKQNVNIDFG-EQILSVVIEVP----GEDAYYLQPRLFGKIIPDKCKYEVLSTK 72 (92)
T ss_dssp CSEEEEEEETTEEEEE----EECCSCCGGGEEEEEC-SSBEEEEECCT----TSCCEEECCBBSSCBCGGGCEEEECSSC
T ss_pred CccccEEeCCCEEEEE----EEECCCChHHeEEEEE-CCEEEEEEEcC----CCcEEEEeeEcCCccCchhEEEEEECCE
Confidence 3789999999999999 9999999999999999 89999997652 1246999999999999999999999999
Q ss_pred EEEEeeccCC
Q 042976 92 LRLTMPKKTH 101 (163)
Q Consensus 92 L~I~~PK~~~ 101 (163)
|.|+++|..+
T Consensus 73 l~i~L~K~~~ 82 (92)
T 2xcm_C 73 IEICLAKADI 82 (92)
T ss_dssp EEEEEEBSSS
T ss_pred EEEEEEcCCC
Confidence 9999999754
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.25 E-value=1.9e-06 Score=64.65 Aligned_cols=78 Identities=12% Similarity=0.346 Sum_probs=70.4
Q ss_pred CCCccceEEcCCEEEEEEeeEEEcCCCC--CCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCC-CcCceEEEE
Q 042976 11 FEPRCRWRREEHQFMLSFSYYYMVVGFK--KDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDC-KSDRIKAKL 87 (163)
Q Consensus 11 ~~P~~di~e~~~~y~l~f~v~~dlPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~v-d~~~i~A~~ 87 (163)
..|.+.+.++++..+|. +.+|... ..++++.++ +..+... ...|.-++.||..| |.+.-+|+|
T Consensus 2 iTP~F~itQd~e~viV~----Ik~P~~~~~~sdiei~v~-~~~F~F~---------~~PYyLRL~LP~~V~e~~~~kA~Y 67 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLK----IFISNIRFSAVGLEIIIQ-ENMIIFH---------LSPYYLRLRFPHELIDDERSTAQY 67 (134)
T ss_dssp CCSEEEEEECSSEEEEE----EECCSSCCCSSSCCCEEC-SSSEEEC---------SSSSCEEECCSSCEECCSSCEEEE
T ss_pred cCceEEEEECCCEEEEE----EEcCccccCccccEEEEe-CCEEEEe---------cCCeEEEecCCCeeecCCCcceeE
Confidence 45889999999999999 9999999 899999999 8999888 56688999999997 889899999
Q ss_pred e--CCEEEEEeeccCCC
Q 042976 88 S--NGILRLTMPKKTHS 102 (163)
Q Consensus 88 ~--nGvL~I~~PK~~~~ 102 (163)
. .|.|+|++||..+-
T Consensus 68 D~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 68 DSKDECINVKVAKLNKN 84 (134)
T ss_dssp ETTTTEEEEEEEESSTT
T ss_pred eccCCEEEEEEeCCCCC
Confidence 8 99999999997543
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.21 E-value=2.2e-05 Score=57.33 Aligned_cols=78 Identities=12% Similarity=0.346 Sum_probs=69.0
Q ss_pred CCCccceEEcCCEEEEEEeeEEEcCCCC--CCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCC-CcCceEEEE
Q 042976 11 FEPRCRWRREEHQFMLSFSYYYMVVGFK--KDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDC-KSDRIKAKL 87 (163)
Q Consensus 11 ~~P~~di~e~~~~y~l~f~v~~dlPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~v-d~~~i~A~~ 87 (163)
..|...+.++++...|. +.+|.+. ..++++.++ ++.+... ...|.-++.||..+ +.+.-+|+|
T Consensus 16 iTP~F~itQDdefv~I~----I~~p~ir~~a~~~ei~vd-~~~F~F~---------~~PYyLRL~lP~~vved~~~~A~Y 81 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLK----IFISNIRFSAVGLEIIIQ-ENMIIFH---------LSPYYLRLRFPHELIDDERSTAQY 81 (115)
T ss_dssp BCCCEEEEECSSEEEEE----EECCSCCCCSSSCEEEEE-TTEEEEE---------ETTEEEEEECSSCEECSTTCEEEE
T ss_pred eCCcEEEEECCCEEEEE----EEcCceecccCccEEEEe-CCEEEEe---------cCCeEEEEecCcceecCCCcceEE
Confidence 34999999999999999 9999877 889999999 9999988 56699999999995 778889999
Q ss_pred e--CCEEEEEeeccCCC
Q 042976 88 S--NGILRLTMPKKTHS 102 (163)
Q Consensus 88 ~--nGvL~I~~PK~~~~ 102 (163)
+ +|.++|++||..+-
T Consensus 82 D~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 82 DSKDECINVKVAKLNKN 98 (115)
T ss_dssp ETTTTEEEEEEEESSTT
T ss_pred eCCCcEEEEEEcCCcCC
Confidence 8 99999999997653
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.14 E-value=5.5e-06 Score=71.25 Aligned_cols=62 Identities=16% Similarity=0.255 Sum_probs=55.9
Q ss_pred EEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcC-ceEEEEeCCEEEEEeec
Q 042976 23 QFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSD-RIKAKLSNGILRLTMPK 98 (163)
Q Consensus 23 ~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~-~i~A~~~nGvL~I~~PK 98 (163)
.|.++ +.|||+++++|++... ++.|+|+ .|.|+|.+.||...... -..|+|+||.|+|++-.
T Consensus 306 ~~~~~----l~lP~~~~~~~~l~~~-gdeL~v~---------~g~~rR~i~LP~~L~~~~v~~A~~~~~~L~i~~~~ 368 (374)
T 3igf_A 306 NRQVR----LFLPGFDKKQVKLTQY-GPEVTVE---------AGDQRRNIFLPPALSGRPITGAKFQNNYLIISFLE 368 (374)
T ss_dssp TTEEE----EECTTCCGGGCEEEEE-TTEEEEE---------ETTEEEEEECCTTTTTCCEEEEEEETTEEEEEECC
T ss_pred cEEEE----EECCCCCHHHeEEEEE-CCeEEEE---------ECCEeecccCCHHHcCCCccccEEECCEEEEEEeh
Confidence 78899 9999999999999999 9999999 79999999999885544 47799999999999854
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.98 E-value=0.00013 Score=53.46 Aligned_cols=81 Identities=12% Similarity=0.198 Sum_probs=69.8
Q ss_pred CCccceEEcCCEEEEEEeeEEEcCCC---CCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEE-CCCCCCcCceEEEE
Q 042976 12 EPRCRWRREEHQFMLSFSYYYMVVGF---KKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIE-VPKDCKSDRIKAKL 87 (163)
Q Consensus 12 ~P~~di~e~~~~y~l~f~v~~dlPG~---~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~-LP~~vd~~~i~A~~ 87 (163)
-++++|.++.+...|. +.+||+ .++++.|.+. .+.|.|...... ...|.-.+. |-..|+++..+.++
T Consensus 20 ~~~y~W~Qt~~~V~i~----I~l~~~~~~~~~~v~V~~~-~~~l~v~~~~~~----~~~y~~~~~~L~~~I~~e~S~~~v 90 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIY----ITLTGVHQVPTENVQVHFT-ERSFDLLVKNLN----GKSYSMIVNNLLKPISVEGSSKKV 90 (127)
T ss_dssp CCSCEEEEETTEEEEE----EECTTTTTSCTTSEEEEEC-SSEEEEEECSCS----SSCEEEEEECBSSCCCTTTCEEEE
T ss_pred ccEEEEEcCCCEEEEE----EEeCCCCcCCccccEEEEE-cCEEEEEEEcCC----CCcEEEEhHHhcCccCcccCEEEE
Confidence 4789999999999999 999999 8999999999 899999874321 135788885 99999999989999
Q ss_pred eCCEEEEEeeccCC
Q 042976 88 SNGILRLTMPKKTH 101 (163)
Q Consensus 88 ~nGvL~I~~PK~~~ 101 (163)
.++.|.|+|-|..+
T Consensus 91 ~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 91 KTDTVLILCRKKVE 104 (127)
T ss_dssp ETTEEEEEEECSSS
T ss_pred eCCEEEEEEEECCC
Confidence 99999999999764
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.81 E-value=0.00011 Score=54.74 Aligned_cols=85 Identities=7% Similarity=0.098 Sum_probs=70.6
Q ss_pred CCccceEEc-CCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccC-----Ccee---eEEEEEECCCCCCcCc
Q 042976 12 EPRCRWRRE-EHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDE-----NNVE---SFSKRIEVPKDCKSDR 82 (163)
Q Consensus 12 ~P~~di~e~-~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~-----~~~g---~F~r~~~LP~~vd~~~ 82 (163)
.|+++|.++ .+...|. +.++++.++++.|.+. .+.|.|........ ...| .|.-.+.|-..|+++.
T Consensus 19 ~~r~~W~Qt~~~~V~vt----I~~k~v~~~~v~V~f~-~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~ 93 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVH----VYVKEICRDTSRVLFR-EQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQ 93 (134)
T ss_dssp CCCEEEEEETTTEEEEE----EECCSBCTTSCEEEEC-SSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEE
T ss_pred CCCeEEEcCCCCEEEEE----EEeCCCCcccCEEEEE-CCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchh
Confidence 478999999 9999999 9999999999999999 89999987543211 0012 6888889999999999
Q ss_pred eEEEEeCCEEEEEeeccCC
Q 042976 83 IKAKLSNGILRLTMPKKTH 101 (163)
Q Consensus 83 i~A~~~nGvL~I~~PK~~~ 101 (163)
-+.++.++-|.|+|.|...
T Consensus 94 S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 94 CTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEEECSSEEEEEEEESSS
T ss_pred CEEEEeCCEEEEEEEECCC
Confidence 8888889999999999754
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.80 E-value=0.00028 Score=51.39 Aligned_cols=79 Identities=13% Similarity=0.153 Sum_probs=66.6
Q ss_pred CccceEEcCCEEEEEEeeEEEcC-CC-CCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCC
Q 042976 13 PRCRWRREEHQFMLSFSYYYMVV-GF-KKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNG 90 (163)
Q Consensus 13 P~~di~e~~~~y~l~f~v~~dlP-G~-~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nG 90 (163)
|.+.|.++.+...|. +.|| |+ +++|+.|.+. .+.|.|..+... ...+.-...|...|+++.-...+.+|
T Consensus 20 ~~y~W~Qt~~~V~i~----I~lp~~~~~~kdv~V~i~-~~~l~v~~~~~~----~~~~~~~~~L~~~I~~e~S~w~i~~~ 90 (124)
T 1wgv_A 20 ENYTWSQDYTDLEVR----VPVPKHVVKGKQVSVALS-SSSIRVAMLEEN----GERVLMEGKLTHKINTESSLWSLEPG 90 (124)
T ss_dssp SSCEEEEETTEEEEE----EECCTTCCSGGGEEEEEC-SSEEEEEEECSS----SEEEEEEEEBSSCBCTTTCEEEECTT
T ss_pred CcEEEEEcccEEEEE----EEcCCCCCchhheEEEEE-cCEEEEEEEccC----CCceEEcccccCcCCCcCCEEEEeCC
Confidence 789999999999999 9998 88 8999999999 899999865311 12245667899999999999999887
Q ss_pred E-EEEEeeccC
Q 042976 91 I-LRLTMPKKT 100 (163)
Q Consensus 91 v-L~I~~PK~~ 100 (163)
- |.|+|-|..
T Consensus 91 k~v~i~L~K~~ 101 (124)
T 1wgv_A 91 KCVLVNLSKVG 101 (124)
T ss_dssp SEEEEEECBSS
T ss_pred CEEEEEEEECC
Confidence 5 999999975
No 21
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.69 E-value=0.00037 Score=53.07 Aligned_cols=86 Identities=10% Similarity=0.129 Sum_probs=70.3
Q ss_pred ccCCCCCCCCCccceEEcCCEEEEEEeeEEEcC-CCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcC
Q 042976 3 TKLQLPADFEPRCRWRREEHQFMLSFSYYYMVV-GFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSD 81 (163)
Q Consensus 3 ~~~~~~~~~~P~~di~e~~~~y~l~f~v~~dlP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~ 81 (163)
.|..+-..-.|.+.|.++.+...|. +.|| |++.+||.|.+. .+.|.|..+. . . .-...|...|+++
T Consensus 4 ~r~~~~~~~~~~y~W~Qt~~eV~v~----I~lp~~~~~kdv~V~i~-~~~L~v~~kg------~-~-~l~g~L~~~I~~e 70 (157)
T 2rh0_A 4 ERSGVVPCGTPWGQWYQTLEEVFIE----VQVPPGTRAQDIQCGLQ-SRHVALAVGG------R-E-ILKGKLFDSTIAD 70 (157)
T ss_dssp GGTTCCCEECSSEEEEECSSEEEEE----EECCTTCCGGGEEEEEC-SSEEEEEETT------E-E-EEEEEBSSCBCGG
T ss_pred hccCcccCCCCcEEEEecCCEEEEE----EECCCCCcccceEEEEe-cCEEEEEECC------E-E-EEeeccccccCcc
Confidence 4444444456889999999999999 9997 999999999999 8999998631 1 2 3567799999999
Q ss_pred ceEEEEeCCE-EEEEeeccCC
Q 042976 82 RIKAKLSNGI-LRLTMPKKTH 101 (163)
Q Consensus 82 ~i~A~~~nGv-L~I~~PK~~~ 101 (163)
.-..++.+|- |.|+|-|...
T Consensus 71 eS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 71 EGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp GCEEEEECCCEEEEEEEBSSC
T ss_pred ccEEEEcCCcEEEEEEEEcCC
Confidence 9999999874 9999999764
No 22
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.67 E-value=0.00039 Score=51.11 Aligned_cols=75 Identities=13% Similarity=0.254 Sum_probs=62.6
Q ss_pred CCccceEEcCCEEEEEEeeEEEcC-CCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCC
Q 042976 12 EPRCRWRREEHQFMLSFSYYYMVV-GFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNG 90 (163)
Q Consensus 12 ~P~~di~e~~~~y~l~f~v~~dlP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nG 90 (163)
.|.+.|.++.+...|. +.|| |++++++.|.+. .+.|.|..+. .. .-...|...|+++.-...+.+|
T Consensus 4 ~~~y~W~Qt~~~V~i~----I~lp~~~~~kdv~V~i~-~~~l~v~~~g-------~~-~~~~~L~~~I~~e~S~w~i~~~ 70 (131)
T 2o30_A 4 EAKYTWDQELNEINIQ----FPVTGDADSSAIKIRMV-GKKICVKNQG-------EI-VIDGELLHEVDVSSLWWVINGD 70 (131)
T ss_dssp -CCCEEEEETTEEEEE----EECC---CCSCEEEEEE-TTEEEEEETT-------EE-EEEEEBSSCEEEEEEEEEEETT
T ss_pred CCcEEEEecCCEEEEE----EECCCCCCccceEEEEE-CCEEEEEECC-------Ee-eEccccccccccccCEEEEeCC
Confidence 4889999999999999 9996 999999999999 9999998631 12 4456799999999999999999
Q ss_pred EEEEEeecc
Q 042976 91 ILRLTMPKK 99 (163)
Q Consensus 91 vL~I~~PK~ 99 (163)
-|.|++-|.
T Consensus 71 kv~i~L~K~ 79 (131)
T 2o30_A 71 VVDVNVTKK 79 (131)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEEEC
Confidence 999999997
No 23
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.62 E-value=0.00037 Score=50.83 Aligned_cols=79 Identities=14% Similarity=0.165 Sum_probs=67.3
Q ss_pred CccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCEE
Q 042976 13 PRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGIL 92 (163)
Q Consensus 13 P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGvL 92 (163)
|.++|.++.+...|+ +.+|+. +++.|.+. .+.|.+++..... ...|.-.+.|-..|+++..+.++.++.|
T Consensus 4 ~~~~W~Qt~~~V~lt----I~~~~~--~~~~V~~~-~~~l~~~~~~~~~---~~~y~~~l~L~~~I~~e~S~~~v~~~ki 73 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIE----FCVEDS--KDVNVNFE-KSKLTFSCLGGSD---NFKHLNEIDLFHCIDPNDSKHKRTDRSI 73 (125)
T ss_dssp CCEEEEECSSEEEEE----ECCTTE--EEEEEEEE-TTEEEEEEEETTT---TEEEEEEEEBSSCEEEEEEEEEECSSCE
T ss_pred CceeEEeCCCEEEEE----EEecCC--CceEEEEE-CCEEEEEEEeCCC---CceEEEEEEccceeccccCEEEECCCEE
Confidence 389999999999999 999995 79999999 8999999775221 2458888999999999998888888999
Q ss_pred EEEeeccCC
Q 042976 93 RLTMPKKTH 101 (163)
Q Consensus 93 ~I~~PK~~~ 101 (163)
.|+|.|..+
T Consensus 74 ei~L~K~~~ 82 (125)
T 1ejf_A 74 LCCLRKGES 82 (125)
T ss_dssp EEEEEESST
T ss_pred EEEEEECCC
Confidence 999999754
No 24
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.59 E-value=0.00063 Score=49.43 Aligned_cols=78 Identities=17% Similarity=0.261 Sum_probs=64.8
Q ss_pred CCccceEEcCCEEEEEEeeEEEcC-C--CCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEe
Q 042976 12 EPRCRWRREEHQFMLSFSYYYMVV-G--FKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLS 88 (163)
Q Consensus 12 ~P~~di~e~~~~y~l~f~v~~dlP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~ 88 (163)
.|.+.|.++.+...|. +.|| | ++.+|+.|.+. .+.|.|..+.. .+.-...|...|+++.....++
T Consensus 16 ~~~y~W~Qt~~eV~v~----V~lp~~~~~~~kdv~V~i~-~~~l~v~~kg~-------~~~~~g~L~~~I~~deS~w~i~ 83 (121)
T 3qor_A 16 LPNYRWTQTLSELDLA----VPFCVNFRLKGKDMVVDIQ-RRHLRVGLKGQ-------PAIIDGELYNEVKVEESSWLIA 83 (121)
T ss_dssp CSSCEEEECSSEEEEE----EECCCSSCCCGGGEEEEEE-TTEEEEEETTS-------CCSEEEEBSSCBCGGGCEEEEE
T ss_pred CCCEEEEEccceEEEE----EECCCCCcccccceEEEEE-cCEEEEEEcCc-------ceEEeccccccccccccEEEEc
Confidence 3789999999999999 9998 4 79999999999 89998864321 1234567999999999999999
Q ss_pred CC-EEEEEeeccCC
Q 042976 89 NG-ILRLTMPKKTH 101 (163)
Q Consensus 89 nG-vL~I~~PK~~~ 101 (163)
+| .|.|+|-|...
T Consensus 84 ~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 84 DGAVVTVHLEKINK 97 (121)
T ss_dssp TTTEEEEEEEBSSS
T ss_pred CCCEEEEEEEECCC
Confidence 88 99999998654
No 25
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.57 E-value=0.00021 Score=52.46 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=64.9
Q ss_pred CCccceEEcCCEEEEEEeeEEEcC-C--CCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEe
Q 042976 12 EPRCRWRREEHQFMLSFSYYYMVV-G--FKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLS 88 (163)
Q Consensus 12 ~P~~di~e~~~~y~l~f~v~~dlP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~ 88 (163)
.|.+.|.++.+...|. +.|| | ++++|+.|.+. .+.|.|..+.. ...-...|...|+++.-...+.
T Consensus 7 ~~~y~W~Qt~~~V~i~----I~lp~~~~~~~kdv~V~i~-~~~l~v~~kg~-------~~~~~~~L~~~I~~e~s~w~i~ 74 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLA----VPFRVSFRLKGKDVVVDIQ-RRHLRVGLKGQ-------PPVVDGELYNEVKVEESSWLIE 74 (131)
T ss_dssp CCSSEEEECSSEEEEE----ECCCCSSCCCTTSEEEEEE-TTEEEEEETTS-------CCSBCSCBSSCBCSTTCEEEEE
T ss_pred CCcEEEEecCCEEEEE----EECCCCCcccccceEEEEe-CCEEEEEECCc-------eEEEecccccccccccCEEEEc
Confidence 4889999999999999 9999 6 89999999999 99999986311 1123456888999999999999
Q ss_pred CC-EEEEEeeccCC
Q 042976 89 NG-ILRLTMPKKTH 101 (163)
Q Consensus 89 nG-vL~I~~PK~~~ 101 (163)
+| .|.|++-|...
T Consensus 75 ~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 75 DGKVVTVHLEKINK 88 (131)
T ss_dssp TTTEEEEEEEBSSS
T ss_pred CCCEEEEEEEECCC
Confidence 88 89999999754
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.00017 Score=53.50 Aligned_cols=83 Identities=14% Similarity=0.324 Sum_probs=60.8
Q ss_pred CCCccceEEcCCE-------EEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCC--ceeeEEEEEECCCCCCcC
Q 042976 11 FEPRCRWRREEHQ-------FMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDEN--NVESFSKRIEVPKDCKSD 81 (163)
Q Consensus 11 ~~P~~di~e~~~~-------y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~--~~g~F~r~~~LP~~vd~~ 81 (163)
..|.+.|.++.+. ..|+ +.+|+++ ++.|.+. .+.|.+++....... ....|.-.+.|...|+++
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~lt----I~~~~~~--~~~V~~~-~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe 77 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLIT----VSIADCD--APELTIK-PSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPE 77 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEE----CCCSSEE--SCCCCBC-SSEEEECCEEC-------CEEBCEEEECSSCCCSS
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEE----EEecCCC--ceEEEEE-CCEEEEEEecccccCCccCceEEEEEEChhhcccc
Confidence 3588999999876 7788 9999974 8888888 899999876532100 124678889999999999
Q ss_pred ceEEEEeCCE-EEEEeeccC
Q 042976 82 RIKAKLSNGI-LRLTMPKKT 100 (163)
Q Consensus 82 ~i~A~~~nGv-L~I~~PK~~ 100 (163)
..+.++.++. |.|+|.|..
T Consensus 78 ~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 78 KTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp SEEEEECCC--CEEEEEECS
T ss_pred ccEEEECCCEEEEEEEEECC
Confidence 9999999888 999999976
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.10 E-value=0.0013 Score=49.74 Aligned_cols=79 Identities=15% Similarity=0.251 Sum_probs=63.7
Q ss_pred CCccceEEcCCEEEEEEeeEEEcCCCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCE
Q 042976 12 EPRCRWRREEHQFMLSFSYYYMVVGFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGI 91 (163)
Q Consensus 12 ~P~~di~e~~~~y~l~f~v~~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGv 91 (163)
.|.++|.++.+...|+ +.||++ +++.|.+...+.|.+++. .. ....|.-.+.|-..|+++ .+.+....-
T Consensus 4 ~P~~~W~Qt~~~V~lt----I~l~~~--~~v~V~~~~~~~l~~~~~-~~---~~~~y~~~l~L~~~Idpe-S~~~v~~~k 72 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLT----VALPDA--KDISVKCEPQGLFSFSAL-GA---QGERFEFSLELYGKIMTE-YRKNVGLRN 72 (150)
T ss_dssp CCCEEEEECSSEEEEE----ECCSSE--EEEEECCCTTEEEEEEEE-TT---TTEEEEEEEEBSSCEEEE-EEEEEESSS
T ss_pred CCcEEEEeCCCEEEEE----EEeCCC--CceEEEEecCCEEEEEEE-cC---CCceEEEEeEhhhccccc-ceEEecCCE
Confidence 5899999999999999 999997 466666652368999987 11 124688889999999999 888888888
Q ss_pred EEEEeeccCC
Q 042976 92 LRLTMPKKTH 101 (163)
Q Consensus 92 L~I~~PK~~~ 101 (163)
+.|+|.|..+
T Consensus 73 Iei~L~K~e~ 82 (150)
T 2kmw_A 73 IIFSIQKEER 82 (150)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999998653
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=71.54 E-value=9.8 Score=25.01 Aligned_cols=34 Identities=15% Similarity=0.372 Sum_probs=29.0
Q ss_pred eeEEEEEECCCCCCcCceEEEEeCCEEEEEeeccC
Q 042976 66 ESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPKKT 100 (163)
Q Consensus 66 g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~ 100 (163)
..|.-.+.|| +++++.|+-++.+|.|+|..-+..
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 4688889998 589999999999999999997653
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=69.44 E-value=9.3 Score=25.32 Aligned_cols=33 Identities=15% Similarity=0.373 Sum_probs=28.7
Q ss_pred eeEEEEEECCCCCCcCceEEEEeCCEEEEEeecc
Q 042976 66 ESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPKK 99 (163)
Q Consensus 66 g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~ 99 (163)
..|.-.+.|| +++.+.|+-.+.+|.|+|..-+.
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 4577889998 78999999999999999999754
No 30
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=66.56 E-value=11 Score=25.56 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=29.0
Q ss_pred eeEEEEEECCCCCCcCceEEEEeCCEEEEEeecc
Q 042976 66 ESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPKK 99 (163)
Q Consensus 66 g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~ 99 (163)
..|.-.+.|| +++.+.|+-++.+|.|+|..-+.
T Consensus 11 ~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 43 (101)
T 2wj5_A 11 GYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHE 43 (101)
T ss_dssp SCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 4677889998 78999999999999999999764
No 31
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=66.32 E-value=11 Score=26.18 Aligned_cols=46 Identities=11% Similarity=0.187 Sum_probs=29.3
Q ss_pred CCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCE---EEEEeec
Q 042976 39 KDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGI---LRLTMPK 98 (163)
Q Consensus 39 ~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGv---L~I~~PK 98 (163)
|+.++|+++ ++.|+|+|.+ |...+.| |. ..|...+++|. |.|..+.
T Consensus 20 P~gV~V~i~-~~~VtVKGPk-------G~L~~~~--~h----~~v~i~~e~~~~~~i~v~~~~ 68 (100)
T 2cql_A 20 PENVDITLK-GRTVIVKGPR-------GTLRRDF--NH----INVELSLLGKKKKRLRVDKWW 68 (100)
T ss_dssp CSSCEEEEE-TTEEEEEETT-------EEEEEEC--CS----SCCEEEEECSSSCEEEEECCS
T ss_pred CCCCEEEEe-CCEEEEECCC-------ceEEEEe--cc----CcEEEEEcCCceeEEEEEccC
Confidence 578889998 8999999766 4455544 31 12445566665 6665543
No 32
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=65.96 E-value=34 Score=24.96 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=27.4
Q ss_pred eEEEEEECCCCCCcCceEEEEeCCEEEEEeeccC
Q 042976 67 SFSKRIEVPKDCKSDRIKAKLSNGILRLTMPKKT 100 (163)
Q Consensus 67 ~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~ 100 (163)
.|.-.+.||. ++.+.|+-++++|.|+|+.-+..
T Consensus 67 ~~~v~~dlPG-~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 67 HIKVIAWLPG-VNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEEECTT-CCGGGEEEEEETTEEEEEEECCC
T ss_pred EEEEEEECCC-CChHhEEEEEECCEEEEEEEEcc
Confidence 4555588984 79999999999999999997755
No 33
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=65.88 E-value=14 Score=24.64 Aligned_cols=34 Identities=21% Similarity=0.465 Sum_probs=28.1
Q ss_pred eeEEEEEECCCCCCcCceEEEEeCCEEEEEeeccC
Q 042976 66 ESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPKKT 100 (163)
Q Consensus 66 g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~ 100 (163)
..|.-.+.|| +++.+.|+-.+++|.|+|..-+..
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred CEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 3566668998 589999999999999999987643
No 34
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=63.72 E-value=30 Score=23.19 Aligned_cols=33 Identities=9% Similarity=-0.035 Sum_probs=27.5
Q ss_pred EEeeEEEcC-CCCCCCEEEEEEeCCEEEEEEEeec
Q 042976 27 SFSYYYMVV-GFKKDQIRVFVNDQGKLRISGKRPI 60 (163)
Q Consensus 27 ~f~v~~dlP-G~~~edi~V~v~~~~~L~I~g~~~~ 60 (163)
.|+=.+.|| +++.+.++-++. +|.|.|+-.+..
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~-~GvL~I~lpK~~ 95 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLA-GGVLTVRFEKLR 95 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEE-TTEEEEEEEBSS
T ss_pred EEEEEEECCCCcchhHcEEEEE-CCEEEEEEEccC
Confidence 455569999 699999999999 999999976654
No 35
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=63.39 E-value=14 Score=25.33 Aligned_cols=32 Identities=9% Similarity=0.269 Sum_probs=27.9
Q ss_pred eeEEEEEECCCCCCcCceEEEEeCCEEEEEeec
Q 042976 66 ESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPK 98 (163)
Q Consensus 66 g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK 98 (163)
..|.-.+.|| +++.+.|+-.+.+|.|+|..-+
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~ 43 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKH 43 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEE
Confidence 4677779998 6899999999999999999864
No 36
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=63.28 E-value=16 Score=27.86 Aligned_cols=45 Identities=16% Similarity=0.390 Sum_probs=33.6
Q ss_pred CCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCEEEEEeec
Q 042976 39 KDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPK 98 (163)
Q Consensus 39 ~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK 98 (163)
|+.++|+++ ++.++|+|.+ |...+.| +.. +....+||.|.++.+.
T Consensus 11 P~gV~V~i~-~~~VtVkGpk-------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVN-GNTVTVKGPK-------GELTRTF--HPD-----MTITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEE-TTEEEEEETT-------EEEEEEC--CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEe-CCEEEEECCC-------eEEEEEc--CCC-----EEEEEeCCEEEEEcCC
Confidence 578899999 9999999876 5566655 443 4456789998888664
No 37
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=60.87 E-value=20 Score=28.18 Aligned_cols=47 Identities=11% Similarity=0.273 Sum_probs=34.4
Q ss_pred CCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCEEEEEeecc
Q 042976 38 KKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPKK 99 (163)
Q Consensus 38 ~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~ 99 (163)
=|+.++|+++ ++.|+|+|.+ |...+.| +.. +....+||.|.|+.+..
T Consensus 38 IP~gV~V~i~-~~~VtVKGPk-------G~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 38 VPSGVTVNAQ-DGVFKVKGPK-------GELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred cCCCcEEEEe-CCEEEEECCC-------EEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 3578899999 9999999876 5566555 443 44567899988886643
No 38
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=58.72 E-value=25 Score=24.44 Aligned_cols=34 Identities=15% Similarity=0.252 Sum_probs=27.8
Q ss_pred eEEEEEECCCCCCcCceEEEEeC-CEEEEEeeccCC
Q 042976 67 SFSKRIEVPKDCKSDRIKAKLSN-GILRLTMPKKTH 101 (163)
Q Consensus 67 ~F~r~~~LP~~vd~~~i~A~~~n-GvL~I~~PK~~~ 101 (163)
.|.-.+.|| +++.+.|+-.+.+ |.|+|..-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 355558898 5899999999999 999999987543
No 39
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=57.74 E-value=15 Score=28.26 Aligned_cols=45 Identities=16% Similarity=0.272 Sum_probs=32.3
Q ss_pred CCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCEEEEEee
Q 042976 39 KDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGILRLTMP 97 (163)
Q Consensus 39 ~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~P 97 (163)
|+.++|+++ ++.++|+|.+ |.-.+.|.-| . ++-.+++|.|.|..+
T Consensus 14 P~gV~v~i~-~~~V~VkGpk-------G~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVE-GYKVKVKGPK-------GELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEES-SSEEEEECSS-------CEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEe-CCEEEEEcCC-------eEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 588999999 9999999766 5566655312 2 445578898888754
No 40
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=57.34 E-value=21 Score=27.24 Aligned_cols=46 Identities=11% Similarity=0.232 Sum_probs=33.4
Q ss_pred CCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCEEEEEeec
Q 042976 39 KDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPK 98 (163)
Q Consensus 39 ~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK 98 (163)
|+.++|+++ ++.++|+|.+ |...+.|. +.. +....+||.|.++.+.
T Consensus 9 P~gV~v~i~-~~~vtVkGpk-------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQD-HLDITVEGDN-------GSVTRRLW-YPD-----IDVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEE-TTEEEEEETT-------EEEEEECC-CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEe-CCEEEEECCC-------eEEEEEEE-CCe-----EEEEEECCEEEEEcCC
Confidence 578899999 9999999876 55666552 333 4456789998887664
No 41
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=49.29 E-value=31 Score=26.26 Aligned_cols=44 Identities=16% Similarity=0.492 Sum_probs=32.5
Q ss_pred CCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCEEEEEee
Q 042976 39 KDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGILRLTMP 97 (163)
Q Consensus 39 ~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~P 97 (163)
|+.++|+++ ++.++|+|.+ |...+.| +.. +.-.++++.|.|..+
T Consensus 12 P~gV~v~i~-~~~v~VkGpk-------G~L~~~~--~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVA-PGRVKVKGPK-------GELEVPV--SPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEE-TTEEEEECSS-------CEEEEEC--CTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEe-CCEEEEEeCC-------cEEEEEe--CCC-----EEEEEECCEEEEEEC
Confidence 688999999 9999999766 5566655 433 344567998888754
No 42
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=47.98 E-value=39 Score=25.96 Aligned_cols=46 Identities=13% Similarity=0.191 Sum_probs=32.5
Q ss_pred CCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEE--eCCEEEEEeec
Q 042976 39 KDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKL--SNGILRLTMPK 98 (163)
Q Consensus 39 ~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~--~nGvL~I~~PK 98 (163)
|+.++|+++ ++.++|+|.+ |.-.+.| +. ..+.-.+ ++|.|.|..+.
T Consensus 13 P~gV~v~i~-~~~V~VkGPk-------G~L~~~~--~~----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVA-AKVVTVEGPR-------GKLTRNF--KH----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEE-TTEEEEEETT-------EEEEEEC--CC----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEe-CCEEEEECCC-------ceEEEEc--cC----CcEEEEEEcCCCEEEEEECC
Confidence 688999999 9999999876 5555554 21 1234455 78888888653
No 43
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=46.36 E-value=27 Score=26.29 Aligned_cols=34 Identities=15% Similarity=0.345 Sum_probs=29.3
Q ss_pred eeeEEEEEECCCCCCcCceEEEEeCCEEEEEeecc
Q 042976 65 VESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPKK 99 (163)
Q Consensus 65 ~g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~ 99 (163)
...|.-.+.|| +++.+.|+-++.+|.|+|..-+.
T Consensus 72 ~d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 72 KDRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp CSEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 35688889998 78999999999999999998654
No 44
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=44.90 E-value=46 Score=25.59 Aligned_cols=47 Identities=11% Similarity=0.347 Sum_probs=33.1
Q ss_pred CCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEE-EeCCEEEEEeec
Q 042976 38 KKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAK-LSNGILRLTMPK 98 (163)
Q Consensus 38 ~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~-~~nGvL~I~~PK 98 (163)
=|+.++|+++ ++.++|+|.+ |.-.+.| +. . .+.-. .++|.|.|..+.
T Consensus 12 IP~gV~v~i~-~~~V~VkGPk-------G~L~~~~--~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 12 VPEGVTVSIK-SRIVKVVGPR-------GTLTKNL--KH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CCTTCEEEEE-TTEEEEEETT-------EEEEEEC--TT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCCcEEEEe-CCEEEEEcCC-------eEEEEEc--cC-C---cEEEEEecCCeEEEEECC
Confidence 3689999999 9999999876 5566654 32 1 23334 468999988753
No 45
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=44.66 E-value=46 Score=24.11 Aligned_cols=33 Identities=12% Similarity=0.354 Sum_probs=26.2
Q ss_pred eEEEEEECCCCCCcCceEEEEe-CCEEEEEeeccC
Q 042976 67 SFSKRIEVPKDCKSDRIKAKLS-NGILRLTMPKKT 100 (163)
Q Consensus 67 ~F~r~~~LP~~vd~~~i~A~~~-nGvL~I~~PK~~ 100 (163)
.|.-.+.|| +++.+.|+-.+. ++.|+|..-+..
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~ 87 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTK 87 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEcc
Confidence 344558898 689999999995 679999997654
No 46
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=39.86 E-value=26 Score=26.94 Aligned_cols=51 Identities=10% Similarity=0.081 Sum_probs=34.5
Q ss_pred EEcCCCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCC-CCCcCceEEEE-eCCEEEEEee
Q 042976 32 YMVVGFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPK-DCKSDRIKAKL-SNGILRLTMP 97 (163)
Q Consensus 32 ~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~-~vd~~~i~A~~-~nGvL~I~~P 97 (163)
..-|=-=|+.++|+++ ++.++|+|.+ |.-.+.| ++ .++.. + ++|.|.|..+
T Consensus 6 ~~~~I~IP~gV~v~i~-~~~V~VkGPk-------G~L~~~~--~~~~v~i~-----~~~~~~l~v~~~ 58 (188)
T 4a17_E 6 TEVNVPIPDKVTITAK-QRVVEVKGPL-------GTIKRAF--RYASVDIQ-----KPTADNVKLQIW 58 (188)
T ss_dssp EEEECCCCTTCEEEEE-TTEEEEEETT-------EEEEEEC--TTSCCEEC-----CCBTTBCEEEEE
T ss_pred ecccEECCCCcEEEEe-CCEEEEEcCC-------eEEEEEc--cCCeEEEE-----EccCCeEEEEEC
Confidence 3445445789999999 9999999876 5555554 32 34333 3 5787887764
No 47
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=37.83 E-value=44 Score=25.69 Aligned_cols=53 Identities=9% Similarity=0.065 Sum_probs=34.7
Q ss_pred EEcCCCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCE---EEEEeec
Q 042976 32 YMVVGFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGI---LRLTMPK 98 (163)
Q Consensus 32 ~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGv---L~I~~PK 98 (163)
...|=-=|+.++|+++ ++.++|+|.+ |...+.| |.. .+....++|. |.|+.+.
T Consensus 6 ~k~pI~IP~gV~V~i~-~~~VtVkGpk-------G~L~~~~--~~~----~v~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 6 SNQTVDIPENVDITLK-GRTVIVKGPR-------GTLRRDF--NHI----NVELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp ----CCCCTTCEEEEE-TTEEEEEETT-------EEEEEEC--CSS----SCEEEEETTTTCEEEEECSC
T ss_pred ccCcEEcCCCCEEEEe-CCEEEEECCC-------eEEEEEe--CCC----CEEEEEecCceeEEEEEcCC
Confidence 3445555789999999 9999999876 5555554 331 2445667887 7777654
No 48
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=35.76 E-value=12 Score=29.73 Aligned_cols=48 Identities=15% Similarity=0.328 Sum_probs=32.5
Q ss_pred CCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCEEEEEeecc
Q 042976 38 KKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPKK 99 (163)
Q Consensus 38 ~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~ 99 (163)
=|+.|+|+++ ++.|+|+|.+ |...+.| +..++.. ..+||.|.|+.+..
T Consensus 53 IP~gV~V~i~-~~~VtVKGPk-------G~L~~~~--~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 53 VPSNVTIALE-GQDLKVKGPL-------GELALTY--PREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp CSTTSCEEES-SSEEEECCSS-------CCEEEEC--CSSCEEE----ECSSSCEEEECSSC
T ss_pred cCCCCEEEEe-CCEEEEECCC-------eEEEEEc--CCCEEEE----EecCCEEEEEcCCC
Confidence 3578889998 8999999766 4555554 5444330 45788888876643
No 49
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=32.80 E-value=31 Score=22.48 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=20.6
Q ss_pred CceEEEEeCCEEEEEeeccCCCCceeeeeecCC
Q 042976 81 DRIKAKLSNGILRLTMPKKTHSHVTRNQAAATA 113 (163)
Q Consensus 81 ~~i~A~~~nGvL~I~~PK~~~~~~~~i~I~~~~ 113 (163)
..|.|.|+||+|+--=|- .-.+..++.|.+..
T Consensus 3 k~IeAiYEnGVfkPLe~l-~L~EG~kV~I~I~~ 34 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQKV-DLKEGERVKIKLEL 34 (69)
T ss_dssp CCEEEEEETTEEEESSCC-CCCTTEEEEEECCC
T ss_pred ceEEEEEECCEEeECCcC-CCCCCCEEEEEEEe
Confidence 458999999999754432 22344566666643
No 50
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=32.74 E-value=1e+02 Score=21.83 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=20.7
Q ss_pred ceEEEEe---CCEEEEEeeccCCCCceeeeeec
Q 042976 82 RIKAKLS---NGILRLTMPKKTHSHVTRNQAAA 111 (163)
Q Consensus 82 ~i~A~~~---nGvL~I~~PK~~~~~~~~i~I~~ 111 (163)
+|+..|+ ||+|.|++--....+...+.|..
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~ 131 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSGKEQKITIKA 131 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEEEEECCCCEEEEEEEECCCCCEEEEEEec
Confidence 5666665 99999999755555556666654
No 51
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=32.67 E-value=28 Score=24.28 Aligned_cols=15 Identities=27% Similarity=0.671 Sum_probs=13.7
Q ss_pred eEEEEeCCEEEEEee
Q 042976 83 IKAKLSNGILRLTMP 97 (163)
Q Consensus 83 i~A~~~nGvL~I~~P 97 (163)
+.+.+.+|||+|+++
T Consensus 30 ~D~e~~~gVLti~f~ 44 (106)
T 1ew4_A 30 IDCEINGGVLTITFE 44 (106)
T ss_dssp CEEEEETTEEEEECT
T ss_pred EeeeccCCEEEEEEC
Confidence 778899999999997
No 52
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=30.30 E-value=38 Score=20.88 Aligned_cols=22 Identities=14% Similarity=0.154 Sum_probs=18.5
Q ss_pred CCCCEEEEEEeCCEEEEEEEeec
Q 042976 38 KKDQIRVFVNDQGKLRISGKRPI 60 (163)
Q Consensus 38 ~~edi~V~v~~~~~L~I~g~~~~ 60 (163)
.-+||.|+.+ +++++|+|.-+.
T Consensus 31 gyndinvtwd-gdtvtvegqleg 52 (62)
T 2gjh_A 31 GYNDINVTWD-GDTVTVEGQLEG 52 (62)
T ss_dssp TCCSCEEEEC-SSCEEEEEECCC
T ss_pred CcccceeEEc-CCEEEEEeEEcC
Confidence 4579999999 999999998653
No 53
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=29.20 E-value=43 Score=24.09 Aligned_cols=16 Identities=31% Similarity=0.677 Sum_probs=14.1
Q ss_pred eEEEEeCCEEEEEeec
Q 042976 83 IKAKLSNGILRLTMPK 98 (163)
Q Consensus 83 i~A~~~nGvL~I~~PK 98 (163)
+-+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 6788999999999974
No 54
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=28.86 E-value=1.6e+02 Score=21.16 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=21.6
Q ss_pred CceEEEEe---CCEEEEEeeccCCCCceeeeeecC
Q 042976 81 DRIKAKLS---NGILRLTMPKKTHSHVTRNQAAAT 112 (163)
Q Consensus 81 ~~i~A~~~---nGvL~I~~PK~~~~~~~~i~I~~~ 112 (163)
-+|...|+ ||+|+|++--...-+...+.|...
T Consensus 81 ~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~ 115 (152)
T 3h0x_A 81 PQIEVTFALDANGILKVSATDKGTGKSESITITND 115 (152)
T ss_dssp SCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECC
T ss_pred ceEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecC
Confidence 34566654 999999997655555556666653
No 55
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=28.62 E-value=24 Score=26.85 Aligned_cols=44 Identities=16% Similarity=0.295 Sum_probs=31.5
Q ss_pred CCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCEEEEEee
Q 042976 39 KDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGILRLTMP 97 (163)
Q Consensus 39 ~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~P 97 (163)
|+.++|+++ ++.++|+|.+ |...+.| +.. +.-.++++.|.|...
T Consensus 11 P~gV~v~i~-~~~V~VkGpk-------G~L~~~~--~~~-----v~i~~~~~~l~v~~~ 54 (176)
T 3r8s_G 11 PAGVDVKIN-GQVITIKGKN-------GELTRTL--NDA-----VEVKHADNTLTFGPR 54 (176)
T ss_dssp CTTCCCEES-SSEEECCBTT-------BCCEEEC--CSS-----CEEEEETTEEEEECC
T ss_pred CCCcEEEEe-CCEEEEEcCC-------EEEEEEC--CCC-----EEEEEeCCEEEEEEC
Confidence 578889998 8999999766 4455554 443 445568899888843
No 56
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=28.07 E-value=79 Score=22.18 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=21.6
Q ss_pred EEEEEECCCCCCcCceEEEEeCCEEEEEe
Q 042976 68 FSKRIEVPKDCKSDRIKAKLSNGILRLTM 96 (163)
Q Consensus 68 F~r~~~LP~~vd~~~i~A~~~nGvL~I~~ 96 (163)
..-.|.||.+++...+...++..-|.|.+
T Consensus 16 V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 16 INIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp EEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred EEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 34458899999999999999988888877
No 57
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=27.37 E-value=1.7e+02 Score=21.01 Aligned_cols=31 Identities=10% Similarity=0.262 Sum_probs=21.0
Q ss_pred CceEEEEe---CCEEEEEeeccCCCCceeeeeec
Q 042976 81 DRIKAKLS---NGILRLTMPKKTHSHVTRNQAAA 111 (163)
Q Consensus 81 ~~i~A~~~---nGvL~I~~PK~~~~~~~~i~I~~ 111 (163)
-+|..+|+ ||+|+|++--...-+...+.|..
T Consensus 81 ~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~ 114 (151)
T 3dqg_A 81 PQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQS 114 (151)
T ss_dssp SCEEEEEEECTTSEEEEEEEETTTCCEEEEEEEC
T ss_pred cEEEEEEEeccCcEEEEEEEEccCCCEeEEEEec
Confidence 34555554 99999999765555555666664
No 58
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=25.84 E-value=1.6e+02 Score=21.27 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=20.7
Q ss_pred CceEEEEe---CCEEEEEeeccCCCCceeeeeec
Q 042976 81 DRIKAKLS---NGILRLTMPKKTHSHVTRNQAAA 111 (163)
Q Consensus 81 ~~i~A~~~---nGvL~I~~PK~~~~~~~~i~I~~ 111 (163)
-+|..+|+ ||+|+|++--...-+...+.|..
T Consensus 81 ~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~ 114 (152)
T 3dob_A 81 PQIEVTFNIDANGILNVSAEDKSTGKSNRITIQN 114 (152)
T ss_dssp CCEEEEEEECTTCCEEEEEEETTTCCEEEEEECC
T ss_pred ceEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEc
Confidence 34555554 99999999765554555666654
No 59
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=25.37 E-value=37 Score=22.10 Aligned_cols=23 Identities=30% Similarity=0.437 Sum_probs=19.3
Q ss_pred CCCCCCEEEEEEeCCEEEEEEEee
Q 042976 36 GFKKDQIRVFVNDQGKLRISGKRP 59 (163)
Q Consensus 36 G~~~edi~V~v~~~~~L~I~g~~~ 59 (163)
-|+.+.|.+... .+.|.|+|+.=
T Consensus 17 sFd~e~i~L~T~-~G~L~IkG~~L 39 (71)
T 2ks0_A 17 SFDPKEILLETI-QGVLSIKGEKL 39 (71)
T ss_dssp EECSSEEEEEET-TEEEEEEEECC
T ss_pred EECCCEEEEEeC-ceEEEEEcCCc
Confidence 368899999998 89999998863
No 60
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=23.07 E-value=1.8e+02 Score=20.54 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=19.2
Q ss_pred ceEEEEe---CCEEEEEeeccCCCCceeeeeec
Q 042976 82 RIKAKLS---NGILRLTMPKKTHSHVTRNQAAA 111 (163)
Q Consensus 82 ~i~A~~~---nGvL~I~~PK~~~~~~~~i~I~~ 111 (163)
+|...|+ ||+|+|++--....+...+.|..
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~ 114 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITN 114 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECS
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeec
Confidence 5666654 99999999644444444555543
No 61
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=22.78 E-value=1.5e+02 Score=20.68 Aligned_cols=36 Identities=8% Similarity=0.139 Sum_probs=26.2
Q ss_pred eEEcCCEEEEEEeeEEEc-CCCCCCCEEEEEEeCCEEEEEEEe
Q 042976 17 WRREEHQFMLSFSYYYMV-VGFKKDQIRVFVNDQGKLRISGKR 58 (163)
Q Consensus 17 i~e~~~~y~l~f~v~~dl-PG~~~edi~V~v~~~~~L~I~g~~ 58 (163)
|...++.+.|. +.+ ||-+++.|. .+. ++.|.|.=..
T Consensus 8 ~~~~~~~v~l~----v~V~P~A~r~~I~-g~~-~~~LkV~v~A 44 (108)
T 1n91_A 8 VTVNDDGLVLR----LYIQPKASRDSIV-GLH-GDEVKVAITA 44 (108)
T ss_dssp EEECSSEEEEE----EEEECSSSSCEEE-EEC-SSCEEEECCC
T ss_pred EEECCCeEEEE----EEEeeCCCcceee-ccc-CCEEEEEEec
Confidence 45566888888 777 999999873 466 7888877443
No 62
>2rl0_A Fibronectin; 4F15F1, beta zipper, staphylococcus aureus, acute phase, alternative splicing, cell adhesion, extracellular matrix; 2.00A {Homo sapiens} SCOP: g.27.1.1 g.27.1.1 PDB: 1fbr_A 2rky_A
Probab=22.71 E-value=26 Score=24.01 Aligned_cols=11 Identities=36% Similarity=0.987 Sum_probs=8.6
Q ss_pred eeeeccceecc
Q 042976 148 FFNIGETWRSS 158 (163)
Q Consensus 148 ~~~~~~~~~~~ 158 (163)
++.||+||.-.
T Consensus 56 ~Y~iGetW~k~ 66 (89)
T 2rl0_A 56 SYRIGDTWSKK 66 (89)
T ss_dssp EEETTCEEEEE
T ss_pred EEEcCceeecC
Confidence 56899999743
No 63
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=21.53 E-value=2.1e+02 Score=21.92 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=26.8
Q ss_pred eeeEEEEEECCC-CCCcCceEEEEe---CCEEEEEeeccCCCCceeeeeec
Q 042976 65 VESFSKRIEVPK-DCKSDRIKAKLS---NGILRLTMPKKTHSHVTRNQAAA 111 (163)
Q Consensus 65 ~g~F~r~~~LP~-~vd~~~i~A~~~---nGvL~I~~PK~~~~~~~~i~I~~ 111 (163)
-|.|.-.- +|. .-..-+|..+|+ ||+|+|++--...-+...+.|..
T Consensus 66 Lg~f~l~g-ipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~ 115 (219)
T 4e81_A 66 LGQFNLDG-INPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKA 115 (219)
T ss_dssp EEEEEEEC-CCCCSTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECT
T ss_pred EEEEEEeC-CCCCCCCCceEEEEEEeCCCCCEeeeeeccccCccceEeeec
Confidence 45665431 332 222234666655 99999999765555555666654
No 64
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=21.35 E-value=2.9e+02 Score=22.61 Aligned_cols=57 Identities=14% Similarity=0.232 Sum_probs=32.4
Q ss_pred EEcCCCCCCCEEEEEEeCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeC
Q 042976 32 YMVVGFKKDQIRVFVNDQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSN 89 (163)
Q Consensus 32 ~dlPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~n 89 (163)
++..+..+.+|+|.+.+.+--.+..+.....+..|.|.-+| .|...-.-.|.-.|.+
T Consensus 279 Vdt~~AG~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y-~P~~~G~~~I~V~~~g 335 (347)
T 4b7l_A 279 VDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEY-LPKVTGLHKVTVLFAG 335 (347)
T ss_dssp EECTTTCSCCEEEEEECTTSCEEECEEEESSTTCSEEEEEE-CCCSSSEEEEEEEETT
T ss_pred EEeCCCCCCceEEEEECCCCCeecCEEEEEcCCCCEEEEEE-EECCCEeEEEEEEECC
Confidence 77777778888888872222222222222233356677777 6766666656665544
No 65
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=21.17 E-value=92 Score=24.88 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=25.6
Q ss_pred CCCCEEEEEEeCCEEEEEEEeeccC-------CceeeEEEEEECCCC
Q 042976 38 KKDQIRVFVNDQGKLRISGKRPIDE-------NNVESFSKRIEVPKD 77 (163)
Q Consensus 38 ~~edi~V~v~~~~~L~I~g~~~~~~-------~~~g~F~r~~~LP~~ 77 (163)
.++++.| + ++.|+|++.+.... -.+|+|+-++.||..
T Consensus 31 ~~~Nv~v--~-~G~L~L~~~k~tsa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--D-QGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--E-TTEEEEEECSSCCEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--E-CCEEEEEEecCCCCEEEECceEeeEEEEEEEEeCCC
Confidence 5666665 5 67788887654321 147899999999975
No 66
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=20.87 E-value=65 Score=23.20 Aligned_cols=17 Identities=12% Similarity=0.438 Sum_probs=14.3
Q ss_pred CceEEEEeCCEEEEEee
Q 042976 81 DRIKAKLSNGILRLTMP 97 (163)
Q Consensus 81 ~~i~A~~~nGvL~I~~P 97 (163)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 34678899999999996
No 67
>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} SCOP: d.108.1.7
Probab=20.10 E-value=2.5e+02 Score=20.14 Aligned_cols=51 Identities=14% Similarity=0.292 Sum_probs=34.7
Q ss_pred eCCEEEEEEEeeccCCceeeEEEEEECCCCCCcCceEEEEeCCEEEEEeeccC
Q 042976 48 DQGKLRISGKRPIDENNVESFSKRIEVPKDCKSDRIKAKLSNGILRLTMPKKT 100 (163)
Q Consensus 48 ~~~~L~I~g~~~~~~~~~g~F~r~~~LP~~vd~~~i~A~~~nGvL~I~~PK~~ 100 (163)
+++.|.|.-+ .....+.....-.+.|.+..... -.|-+.++.|.|.+|...
T Consensus 4 sd~~L~V~ee-~~~n~~~~~L~F~~~lTe~~~~~-W~~Vl~~~~Lyv~iP~~~ 54 (126)
T 1zo0_A 4 SDERLNVTEE-PTSNDKTRVLSIQCTLTEAKQVT-WRAVWNGGGLYIELPAGP 54 (126)
T ss_dssp ECSSEEEEEE-CCTTSSCEEEEEEECCTTSCCEE-EEEEEETTEEEEECSSCC
T ss_pred ccCeeEEEee-cCCCCCceEEEEEEEecCCCcce-EEEEEeCCeEEEEcCCcc
Confidence 4788999877 33333445566666777665444 467788999999999743
Done!